ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf70f07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK108777:Os02g0119700 29 2.3
2AK107047:Os02g0265100 24 5.1
3Os04g0400600:Os04g0400600 28 6.6
4Os06g0490400:Os06g0490400 27 8.6
5AK062358:Os01g0302800 27 8.6
6AK064480:Os04g0650900 27 8.6

>AK108777:Os02g0119700 |
          Length = 367
 Score = 29.3 bits (64), Expect = 2.3
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +3

Query: 219 LPELHPQPCSAPSRP--ISPEPPCCRRG 296
           L ELHP P S P RP  ++     CRRG
Sbjct: 126 LAELHPSPASPPPRPALLALSDAVCRRG 153



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>AK107047:Os02g0265100 |
          Length = 97

 Score = 24.3 bits (51), Expect(2) = 5.1
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 328 HPRRRPSPLWPPVAGAS 378
           HPRRRP P     AGA+
Sbjct: 46  HPRRRPPPPTAAAAGAA 62



 Score = 22.7 bits (47), Expect(2) = 5.1
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 287 PPWVPTGTGWSGASIP 334
           PPW  +   WSG + P
Sbjct: 26  PPWTASAAVWSGRAPP 41



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>Os04g0400600:Os04g0400600 |
          Length = 225

 Score = 27.7 bits (60), Expect = 6.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 222 PELHPQPCSAPSRPISPEPPCCRRGYL 302
           P   P PC  P +P+ P PPC   GY+
Sbjct: 190 PCCSPPPC--PWQPVCPPPPCGGGGYV 214



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>Os06g0490400:Os06g0490400 |
          Length = 729

 Score = 27.3 bits (59), Expect = 8.6
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = -2

Query: 272 GRDRPRGSGARLRVELGKLAXXXXXXXXXXEGASSGGSGRLMELEG 135
           G D   G GA  R+ LG+ +           GA+  GSGR    EG
Sbjct: 471 GGDGDGGDGAARRLRLGRGSGDSSRRGGGGSGATPAGSGRRRRSEG 516



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>AK062358:Os01g0302800 |
          Length = 128

 Score = 27.3 bits (59), Expect = 8.6
 Identities = 17/55 (30%), Positives = 22/55 (40%)
 Frame = -3

Query: 406 RCNHTGLQPRWHRRLEATEGLGAAGDGCXXXXXXXXXXXRQQGGSGEIGREGAEH 242
           R   TG + RW     A + + A G G               GG G++GRE  EH
Sbjct: 84  RSRATGGRIRWQLGSRAADPVSARGMG------------GGSGGDGDLGRESGEH 126



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>AK064480:Os04g0650900 |
          Length = 531

 Score = 27.3 bits (59), Expect = 8.6
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -1

Query: 345 WAPPGMDAPLHPVPVG 298
           W PP M A LH VPVG
Sbjct: 98  WEPPQMKALLHSVPVG 113


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 15,841,569
Number of extensions: 338966
Number of successful extensions: 1660
Number of sequences better than 10.0: 6
Number of HSP's gapped: 1658
Number of HSP's successfully gapped: 7
Length of query: 210
Length of database: 15,399,855
Length adjustment: 96
Effective length of query: 114
Effective length of database: 11,555,919
Effective search space: 1317374766
Effective search space used: 1317374766
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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