| Clone Name | FLbaf70f07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK108777:Os02g0119700 | 29 | 2.3 | 2 | AK107047:Os02g0265100 | 24 | 5.1 | 3 | Os04g0400600:Os04g0400600 | 28 | 6.6 | 4 | Os06g0490400:Os06g0490400 | 27 | 8.6 | 5 | AK062358:Os01g0302800 | 27 | 8.6 | 6 | AK064480:Os04g0650900 | 27 | 8.6 |
|---|
>AK108777:Os02g0119700 | Length = 367 Score = 29.3 bits (64), Expect = 2.3 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%) Frame = +3 Query: 219 LPELHPQPCSAPSRP--ISPEPPCCRRG 296 L ELHP P S P RP ++ CRRG Sbjct: 126 LAELHPSPASPPPRPALLALSDAVCRRG 153
>AK107047:Os02g0265100 | Length = 97 Score = 24.3 bits (51), Expect(2) = 5.1 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +1 Query: 328 HPRRRPSPLWPPVAGAS 378 HPRRRP P AGA+ Sbjct: 46 HPRRRPPPPTAAAAGAA 62 Score = 22.7 bits (47), Expect(2) = 5.1 Identities = 7/16 (43%), Positives = 9/16 (56%) Frame = +2 Query: 287 PPWVPTGTGWSGASIP 334 PPW + WSG + P Sbjct: 26 PPWTASAAVWSGRAPP 41
>Os04g0400600:Os04g0400600 | Length = 225 Score = 27.7 bits (60), Expect = 6.6 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +3 Query: 222 PELHPQPCSAPSRPISPEPPCCRRGYL 302 P P PC P +P+ P PPC GY+ Sbjct: 190 PCCSPPPC--PWQPVCPPPPCGGGGYV 214
>Os06g0490400:Os06g0490400 | Length = 729 Score = 27.3 bits (59), Expect = 8.6 Identities = 16/46 (34%), Positives = 20/46 (43%) Frame = -2 Query: 272 GRDRPRGSGARLRVELGKLAXXXXXXXXXXEGASSGGSGRLMELEG 135 G D G GA R+ LG+ + GA+ GSGR EG Sbjct: 471 GGDGDGGDGAARRLRLGRGSGDSSRRGGGGSGATPAGSGRRRRSEG 516
>AK062358:Os01g0302800 | Length = 128 Score = 27.3 bits (59), Expect = 8.6 Identities = 17/55 (30%), Positives = 22/55 (40%) Frame = -3 Query: 406 RCNHTGLQPRWHRRLEATEGLGAAGDGCXXXXXXXXXXXRQQGGSGEIGREGAEH 242 R TG + RW A + + A G G GG G++GRE EH Sbjct: 84 RSRATGGRIRWQLGSRAADPVSARGMG------------GGSGGDGDLGRESGEH 126
>AK064480:Os04g0650900 | Length = 531 Score = 27.3 bits (59), Expect = 8.6 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = -1 Query: 345 WAPPGMDAPLHPVPVG 298 W PP M A LH VPVG Sbjct: 98 WEPPQMKALLHSVPVG 113 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,841,569 Number of extensions: 338966 Number of successful extensions: 1660 Number of sequences better than 10.0: 6 Number of HSP's gapped: 1658 Number of HSP's successfully gapped: 7 Length of query: 210 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 114 Effective length of database: 11,555,919 Effective search space: 1317374766 Effective search space used: 1317374766 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)