ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf70f07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_001228510.1| Chaetomium globosum CBS 148.51 hypothetical ... 44 0.59
2ref|XM_001145115.1| PREDICTED: Pan troglodytes hypothetical prot... 42 2.4
3gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 2.4
4gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
5gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
6gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESR... 42 2.4
7gb|BC012054.1| Homo sapiens zinc finger protein 160, mRNA (cDNA ... 42 2.4
8gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 2.4
9gb|AC121570.4| Mus musculus BAC clone RP23-228G6 from 16, comple... 42 2.4
10gb|AC027682.10| Homo sapiens chromosome 16 clone CTD-2012K14, co... 42 2.4
11ref|XM_568650.1| Cryptococcus neoformans var. neoformans JEC21 i... 42 2.4
12gb|DQ374394.1| Homo sapiens agouti related protein homolog (mous... 42 2.4
13dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
14gb|AC096634.2| Homo sapiens chromosome 1 clone RP11-66M7, comple... 42 2.4
15gb|AC158524.2| Mus musculus BAC clone RP23-377I1 from chromosome... 42 2.4
16gb|AC009061.10|AC009061 Homo sapiens chromosome 16 clone RP11-29... 42 2.4
17gb|AC133108.3| Homo sapiens BAC clone RP11-673D13 from 2, comple... 42 2.4
18gb|AC155268.1| Mus musculus BAC clone RP23-204K22 from 16, compl... 42 2.4
19gb|CP000471.1| Magnetococcus sp. MC-1, complete genome 40 9.3
20ref|NM_001064785.1| Oryza sativa (japonica cultivar-group) Os06g... 40 9.3
21ref|XM_001214289.1| Aspergillus terreus NIH2624 conserved hypoth... 40 9.3
22gb|DQ279927.1| Human herpesvirus 4 strain AG876, complete genome 40 9.3
23emb|V01555.2|EBV Epstein-Barr virus (EBV) genome, strain B95-8 40 9.3
24gb|AC149231.2| Pan troglodytes BAC clone CH251-481H1 from 7, com... 40 9.3
25gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.3
26gb|AC120922.4| Rattus norvegicus 9 BAC CH230-104J1 (Children's H... 40 9.3
27gb|AC121933.3| Mus musculus BAC clone RP24-206I11 from chromosom... 40 9.3
28gb|AC004485.2| Homo sapiens BAC clone CTB-118E13 from 7, complet... 40 9.3
29gb|AC142338.1| Pan troglodytes BAC clone RP43-41H4 from 7, compl... 40 9.3
30gb|AC142353.1| Pan troglodytes BAC clone RP43-21M1 from 7, compl... 40 9.3
31dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 40 9.3
32emb|BX957235.12| Zebrafish DNA sequence from clone DKEY-84K17 in... 40 9.3
33gb|AC024086.5| Homo sapiens chromosome 7 clone RP11-242F21, comp... 40 9.3
34emb|CR668913.2|CNS0FF3R Tetraodon nigroviridis full-length cDNA 40 9.3
35dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
36dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
37dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
38gb|AC093637.5| Homo sapiens BAC clone RP11-239C17 from 4, comple... 40 9.3
39gb|AC024561.5| Homo sapiens chromosome 5 clone CTB-94B10, comple... 40 9.3
40gb|AC124554.5| Mus musculus BAC clone RP23-245F10 from chromosom... 40 9.3
41gb|AC060765.5|AC060765 Homo sapiens chromosome 8, clone RP11-653... 40 9.3
42dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 9.3
43dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
44dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
45dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
46dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
47gb|AC016673.5| Homo sapiens BAC clone RP11-17N4 from 2, complete... 40 9.3
48gb|AC092531.16| Rattus norvegicus clone rp32-475b19, complete se... 40 9.3
49gb|AC009358.6|AC009358 Human Chromosome 7 clone RP11-191E5, comp... 40 9.3
50gb|AF478117.1| Petalomyrmex phylax clone Pet32 microsatellite se... 40 9.3
51dbj|AK105987.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
52dbj|AK069365.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
53gb|AF151560.1| Hypsoropha monilis dopa decarboxylase (DDC) mRNA,... 40 9.3
54gb|AY037858.1| Cercopithicine herpesvirus 15 strain LCL8664, com... 40 9.3
55dbj|AP000999.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.3
56dbj|AP000802.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.3
57dbj|AP001525.6| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 9.3
58dbj|AP001793.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 9.3
59gb|AY961628.3| Human herpesvirus 4 strain GD1, complete genome 40 9.3
60gb|AF028513.1|AF028513 Lagothrix lagotricha glucose-6-phosphate ... 40 9.3
61emb|AJ507799.2|HHV507799 Human herpesvirus 4 complete wild type ... 40 9.3
62emb|AL773565.17| Mouse DNA sequence from clone RP23-76A20 on chr... 40 9.3
63emb|AL954153.6|CNS08CCR Oryza sativa chromosome 12, . Partial se... 40 9.3
64emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 9.3
65gb|M80517.1|HS4B958RAJ Epstein-Barr virus, artifactual joining o... 40 9.3
66gb|AC157492.17| Mus musculus chromosome 3, clone RP24-73C21, com... 40 9.3
67gb|AC117665.6| Mus musculus chromosome 8, clone RP23-360I9, comp... 40 9.3

>ref|XM_001228510.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_10584)
           mRNA, complete cds
          Length = 570
 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 276 cctccctgctgccgccgtgggt 297
           ||||||||||||||||||||||
Sbjct: 376 cctccctgctgccgccgtgggt 355



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>ref|XM_001145115.1| PREDICTED: Pan troglodytes hypothetical protein LOC742124
           (LOC742124), mRNA
          Length = 524

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 188 tccatcttctcctctccctga 208
           |||||||||||||||||||||
Sbjct: 334 tccatcttctcctctccctga 314



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>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete
              sequence
          Length = 762694

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 181    tccaccctccatcttctcctctccc 205
              |||||||||||||||| ||||||||
Sbjct: 483335 tccaccctccatcttcccctctccc 483359



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>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
           OJ1735_C10, complete sequence
          Length = 187034

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 460 gcgggacccacctgtcagtgatagc 484
           |||||||||||||||||| ||||||
Sbjct: 307 gcgggacccacctgtcagcgatagc 283



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>gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0040E06,
              complete sequence
          Length = 160907

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 460    gcgggacccacctgtcagtgatagc 484
              |||||||||||||||||| ||||||
Sbjct: 148740 gcgggacccacctgtcagcgatagc 148716



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>gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESRRG) gene, complete cds
          Length = 590284

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 341   gcccaagccctctgtggcctc 361
             |||||||||||||||||||||
Sbjct: 43324 gcccaagccctctgtggcctc 43344



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>gb|BC012054.1| Homo sapiens zinc finger protein 160, mRNA (cDNA clone
           IMAGE:4576104), with apparent retained intron
          Length = 1729

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 370 ggtgccagcgaggctgaagcc 390
           |||||||||||||||||||||
Sbjct: 248 ggtgccagcgaggctgaagcc 228



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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 2       gccgtcgccctcaccaccctc 22
               |||||||||||||||||||||
Sbjct: 3758436 gccgtcgccctcaccaccctc 3758416



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>gb|AC121570.4| Mus musculus BAC clone RP23-228G6 from 16, complete sequence
          Length = 184174

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   ccctccatcttctcctctccc 205
             |||||||||||||||||||||
Sbjct: 37570 ccctccatcttctcctctccc 37550



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>gb|AC027682.10| Homo sapiens chromosome 16 clone CTD-2012K14, complete sequence
          Length = 162991

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 188   tccatcttctcctctccctga 208
             |||||||||||||||||||||
Sbjct: 78491 tccatcttctcctctccctga 78471



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>ref|XM_568650.1| Cryptococcus neoformans var. neoformans JEC21 isoleucyl-tRNA
            synthetase, mitochondrial (CNN01660) partial mRNA
          Length = 3213

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 181  tccaccctccatcttctcctctccc 205
            |||||||||||||||| ||||||||
Sbjct: 1208 tccaccctccatcttcccctctccc 1232



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>gb|DQ374394.1| Homo sapiens agouti related protein homolog (mouse) (AGRP) gene,
             complete cds
          Length = 50303

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 188   tccatcttctcctctccctga 208
             |||||||||||||||||||||
Sbjct: 43861 tccatcttctcctctccctga 43881



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 460      gcgggacccacctgtcagtgatagc 484
                |||||||||||||||||| ||||||
Sbjct: 28216065 gcgggacccacctgtcagcgatagc 28216041



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 461      cgggacccacctgtcagtga 480
                ||||||||||||||||||||
Sbjct: 18409365 cgggacccacctgtcagtga 18409346



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>gb|AC096634.2| Homo sapiens chromosome 1 clone RP11-66M7, complete sequence
          Length = 163926

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 341   gcccaagccctctgtggcctc 361
             |||||||||||||||||||||
Sbjct: 78298 gcccaagccctctgtggcctc 78278



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>gb|AC158524.2| Mus musculus BAC clone RP23-377I1 from chromosome 13, complete sequence
          Length = 191904

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 587   gcctgtctgtgaataaaatttttac 611
             |||||||| ||||||||||||||||
Sbjct: 47767 gcctgtctctgaataaaatttttac 47743



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>gb|AC009061.10|AC009061 Homo sapiens chromosome 16 clone RP11-297D21, complete sequence
          Length = 200618

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 188    tccatcttctcctctccctga 208
              |||||||||||||||||||||
Sbjct: 183464 tccatcttctcctctccctga 183444



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>gb|AC133108.3| Homo sapiens BAC clone RP11-673D13 from 2, complete sequence
          Length = 31815

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 186   cctccatcttctcctctccct 206
             |||||||||||||||||||||
Sbjct: 26644 cctccatcttctcctctccct 26624



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>gb|AC155268.1| Mus musculus BAC clone RP23-204K22 from 16, complete sequence
          Length = 218381

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 185    ccctccatcttctcctctccc 205
              |||||||||||||||||||||
Sbjct: 144397 ccctccatcttctcctctccc 144377



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>gb|CP000471.1| Magnetococcus sp. MC-1, complete genome
          Length = 4719581

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 1       ggccgtcgccctcaccaccc 20
               ||||||||||||||||||||
Sbjct: 1459841 ggccgtcgccctcaccaccc 1459822



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>ref|NM_001064785.1| Oryza sativa (japonica cultivar-group) Os06g0655500 (Os06g0655500)
            mRNA, complete cds
          Length = 1861

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 461  cgggacccacctgtcagtga 480
            ||||||||||||||||||||
Sbjct: 1459 cgggacccacctgtcagtga 1478



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>ref|XM_001214289.1| Aspergillus terreus NIH2624 conserved hypothetical protein
           (ATEG_05111) mRNA, complete cds
          Length = 537

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 6   tcgccctcaccaccctcctc 25
           ||||||||||||||||||||
Sbjct: 188 tcgccctcaccaccctcctc 169



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>gb|DQ279927.1| Human herpesvirus 4 strain AG876, complete genome
          Length = 172764

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 115   ggccacctgggcctcctccacccc 138
             |||||||||||||||| |||||||
Sbjct: 75081 ggccacctgggcctccaccacccc 75058



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>emb|V01555.2|EBV Epstein-Barr virus (EBV) genome, strain B95-8
          Length = 172281

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 115   ggccacctgggcctcctccacccc 138
             |||||||||||||||| |||||||
Sbjct: 87235 ggccacctgggcctccaccacccc 87212



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>gb|AC149231.2| Pan troglodytes BAC clone CH251-481H1 from 7, complete sequence
          Length = 217836

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   cctccaccctccatcttctc 198
             ||||||||||||||||||||
Sbjct: 13570 cctccaccctccatcttctc 13551



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>gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1354_D07,
             complete sequence
          Length = 156163

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 461   cgggacccacctgtcagtga 480
             ||||||||||||||||||||
Sbjct: 49202 cgggacccacctgtcagtga 49183



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>gb|AC120922.4| Rattus norvegicus 9 BAC CH230-104J1 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 256354

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     tgcctagccacctgaccgag 51
              ||||||||||||||||||||
Sbjct: 125411 tgcctagccacctgaccgag 125392



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>gb|AC121933.3| Mus musculus BAC clone RP24-206I11 from chromosome 8, complete sequence
          Length = 182816

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 482    agcagctgctgccaggctggataa 505
              |||||||||||||||||| |||||
Sbjct: 176760 agcagctgctgccaggcttgataa 176737



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>gb|AC004485.2| Homo sapiens BAC clone CTB-118E13 from 7, complete sequence
          Length = 185516

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 373   gccagcgaggctgaagccctgtgt 396
             |||||||| |||||||||||||||
Sbjct: 84069 gccagcgatgctgaagccctgtgt 84046



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>gb|AC142338.1| Pan troglodytes BAC clone RP43-41H4 from 7, complete sequence
          Length = 186208

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 179    cctccaccctccatcttctc 198
              ||||||||||||||||||||
Sbjct: 101379 cctccaccctccatcttctc 101398



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>gb|AC142353.1| Pan troglodytes BAC clone RP43-21M1 from 7, complete sequence
          Length = 182634

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 373    gccagcgaggctgaagccctgtgt 396
              |||||||| |||||||||||||||
Sbjct: 154822 gccagcgatgctgaagccctgtgt 154845



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>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
          Length = 1913118

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 565    gctttctgtttctcggccag 584
              ||||||||||||||||||||
Sbjct: 850150 gctttctgtttctcggccag 850169



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>emb|BX957235.12| Zebrafish DNA sequence from clone DKEY-84K17 in linkage group 17,
             complete sequence
          Length = 171764

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 382   gctgaagccctgtgtggttgcacc 405
             |||||||||||||||| |||||||
Sbjct: 42265 gctgaagccctgtgtgattgcacc 42242



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>gb|AC024086.5| Homo sapiens chromosome 7 clone RP11-242F21, complete sequence
          Length = 153232

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   cctccaccctccatcttctc 198
             ||||||||||||||||||||
Sbjct: 82262 cctccaccctccatcttctc 82281



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>emb|CR668913.2|CNS0FF3R Tetraodon nigroviridis full-length cDNA
          Length = 1655

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 197 tcctctccctgaccacggcgagct 220
           ||||||||||||||||| ||||||
Sbjct: 719 tcctctccctgaccacgccgagct 696



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 463      ggacccacctgtcagtgata 482
                ||||||||||||||||||||
Sbjct: 18763491 ggacccacctgtcagtgata 18763510



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 461      cgggacccacctgtcagtga 480
                ||||||||||||||||||||
Sbjct: 22682991 cgggacccacctgtcagtga 22683010



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 461      cgggacccacctgtcagtga 480
                ||||||||||||||||||||
Sbjct: 26493875 cgggacccacctgtcagtga 26493856



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>gb|AC093637.5| Homo sapiens BAC clone RP11-239C17 from 4, complete sequence
          Length = 111211

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 589   ctgtctgtgaataaaatttt 608
             ||||||||||||||||||||
Sbjct: 29631 ctgtctgtgaataaaatttt 29650



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>gb|AC024561.5| Homo sapiens chromosome 5 clone CTB-94B10, complete sequence
          Length = 155125

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   ccacctgggcctcctccacc 136
             ||||||||||||||||||||
Sbjct: 96898 ccacctgggcctcctccacc 96917



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>gb|AC124554.5| Mus musculus BAC clone RP23-245F10 from chromosome 3, complete sequence
          Length = 191481

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 482    agcagctgctgccaggctgg 501
              ||||||||||||||||||||
Sbjct: 109110 agcagctgctgccaggctgg 109129



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>gb|AC060765.5|AC060765 Homo sapiens chromosome 8, clone RP11-653B10, complete sequence
          Length = 170392

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 189   ccatcttctcctctccctgaccac 212
             |||||||||||||||||| |||||
Sbjct: 53579 ccatcttctcctctccctcaccac 53602



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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 112     ctcggccacctgggcctcct 131
               ||||||||||||||||||||
Sbjct: 1804856 ctcggccacctgggcctcct 1804875



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>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0460H04
          Length = 166490

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 461   cgggacccacctgtcagtga 480
             ||||||||||||||||||||
Sbjct: 27528 cgggacccacctgtcagtga 27509



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>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0709F06
          Length = 170964

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 461    cgggacccacctgtcagtga 480
              ||||||||||||||||||||
Sbjct: 105914 cgggacccacctgtcagtga 105895



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>dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1773_H01
          Length = 146543

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 461    cgggacccacctgtcagtga 480
              ||||||||||||||||||||
Sbjct: 100889 cgggacccacctgtcagtga 100908



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>dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1092_A07
          Length = 137081

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 461  cgggacccacctgtcagtga 480
            ||||||||||||||||||||
Sbjct: 2333 cgggacccacctgtcagtga 2352



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>gb|AC016673.5| Homo sapiens BAC clone RP11-17N4 from 2, complete sequence
          Length = 185332

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 482   agcagctgctgccaggctgg 501
             ||||||||||||||||||||
Sbjct: 37516 agcagctgctgccaggctgg 37535



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>gb|AC092531.16| Rattus norvegicus clone rp32-475b19, complete sequence
          Length = 160215

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   tgcctagccacctgaccgag 51
            ||||||||||||||||||||
Sbjct: 3483 tgcctagccacctgaccgag 3464



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>gb|AC009358.6|AC009358 Human Chromosome 7 clone RP11-191E5, complete sequence
          Length = 185124

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   cctccaccctccatcttctc 198
             ||||||||||||||||||||
Sbjct: 78667 cctccaccctccatcttctc 78686



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>gb|AF478117.1| Petalomyrmex phylax clone Pet32 microsatellite sequence
          Length = 579

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 176 ccccctccaccctccatcttctcc 199
           |||||||| |||||||||||||||
Sbjct: 454 ccccctcctccctccatcttctcc 431



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>dbj|AK105987.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G09, full
           insert sequence
          Length = 1128

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 461 cgggacccacctgtcagtga 480
           ||||||||||||||||||||
Sbjct: 755 cgggacccacctgtcagtga 774



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>dbj|AK069365.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014H04, full
            insert sequence
          Length = 1862

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 461  cgggacccacctgtcagtga 480
            ||||||||||||||||||||
Sbjct: 1460 cgggacccacctgtcagtga 1479



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>gb|AF151560.1| Hypsoropha monilis dopa decarboxylase (DDC) mRNA, partial cds
          Length = 705

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 30  cctgcctagccacctgaccgagcc 53
           ||||||| ||||||||||||||||
Sbjct: 101 cctgcctcgccacctgaccgagcc 78



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>gb|AY037858.1| Cercopithicine herpesvirus 15 strain LCL8664, complete genome
          Length = 171096

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 115   ggccacctgggcctcctccacccc 138
             |||||||||||||||| |||||||
Sbjct: 68833 ggccacctgggcctccaccacccc 68810



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>dbj|AP000999.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-667I23, complete
             sequence
          Length = 189892

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   catcttctcctctccctgac 209
             ||||||||||||||||||||
Sbjct: 31915 catcttctcctctccctgac 31896



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>dbj|AP000802.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-629G13, complete
              sequence
          Length = 183165

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 190    catcttctcctctccctgac 209
              ||||||||||||||||||||
Sbjct: 138781 catcttctcctctccctgac 138762



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>dbj|AP001525.6| Homo sapiens genomic DNA, chromosome 18 clone:RP11-720L3, complete
             sequence
          Length = 175581

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    ccctgcctagccacctgacc 48
             ||||||||||||||||||||
Sbjct: 36360 ccctgcctagccacctgacc 36379



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>dbj|AP001793.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-661O13, complete
             sequence
          Length = 195743

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    caccctcctctacccctgcc 35
             ||||||||||||||||||||
Sbjct: 78371 caccctcctctacccctgcc 78390



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>gb|AY961628.3| Human herpesvirus 4 strain GD1, complete genome
          Length = 171657

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 115   ggccacctgggcctcctccacccc 138
             |||||||||||||||| |||||||
Sbjct: 74965 ggccacctgggcctccaccacccc 74942



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>gb|AF028513.1|AF028513 Lagothrix lagotricha glucose-6-phosphate dehydrogenase (G6PD) gene,
           intron 5
          Length = 656

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 318 gcggcgcatccatccccggc 337
           ||||||||||||||||||||
Sbjct: 97  gcggcgcatccatccccggc 116



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>emb|AJ507799.2|HHV507799 Human herpesvirus 4 complete wild type genome
          Length = 171823

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 115   ggccacctgggcctcctccacccc 138
             |||||||||||||||| |||||||
Sbjct: 74947 ggccacctgggcctccaccacccc 74924



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>emb|AL773565.17| Mouse DNA sequence from clone RP23-76A20 on chromosome X, complete
             sequence
          Length = 132915

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   ctccatcttctcctctccct 206
             ||||||||||||||||||||
Sbjct: 85082 ctccatcttctcctctccct 85101



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>emb|AL954153.6|CNS08CCR Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0060B11
             of library OSJNBb from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 109192

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 463   ggacccacctgtcagtgata 482
             ||||||||||||||||||||
Sbjct: 56111 ggacccacctgtcagtgata 56092



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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 178    ccctccaccctccatcttctcctc 201
              |||||||||| |||||||||||||
Sbjct: 699947 ccctccacccgccatcttctcctc 699924



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>gb|M80517.1|HS4B958RAJ Epstein-Barr virus, artifactual joining of B95-8 complete genome and
             the sequences from Raji of the large deletion found in
             B95-8
          Length = 184113

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 115   ggccacctgggcctcctccacccc 138
             |||||||||||||||| |||||||
Sbjct: 87235 ggccacctgggcctccaccacccc 87212



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>gb|AC157492.17| Mus musculus chromosome 3, clone RP24-73C21, complete sequence
          Length = 187001

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 486   gctgctgccaggctggataa 505
             ||||||||||||||||||||
Sbjct: 12624 gctgctgccaggctggataa 12605



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>gb|AC117665.6| Mus musculus chromosome 8, clone RP23-360I9, complete sequence
          Length = 217058

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 482    agcagctgctgccaggctggataa 505
              |||||||||||||||||| |||||
Sbjct: 115739 agcagctgctgccaggcttgataa 115762


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 94,087,665
Number of extensions: 5197745
Number of successful extensions: 124043
Number of sequences better than 10.0: 67
Number of HSP's gapped: 124043
Number of HSP's successfully gapped: 68
Length of query: 630
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 608
Effective length of database: 18,508,616,841
Effective search space: 11253239039328
Effective search space used: 11253239039328
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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