ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf70e20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK068659:Os11g0448700 83 2e-16
2AK099523:Os11g0449600 47 1e-05
3Os02g0670500:Os02g0670500 39 0.002
4AK067878:Os01g0357900 39 0.003
5AK063211:Os04g0383700 36 0.026
6AK119942:Os12g0571500 33 0.13
7AK105209:Os01g0358100 33 0.17
8Os06g0536800:Os06g0536800 33 0.22
9AK058855:Os12g0571700 32 0.29
10AK101770:Os01g0851300 32 0.38
11AK062807:Os04g0382900 31 0.64
12Os03g0325900:Os03g0325900 29 2.4
13AK105568:Os11g0176000 29 3.2
14AK107647: 29 3.2
15AK073461:Os02g0512400 28 4.1
16AK108505:Os06g0633500 28 4.2
17AK103420:Os12g0541700 28 4.2
18Os08g0557300:Os08g0557300 28 5.4
19AK110157: 28 7.1
20AK099732:Os10g0518300 28 7.1
21AK060414:Os06g0115700 28 7.1
22AK068503:Os03g0336300 27 9.3

>AK068659:Os11g0448700 |
          Length = 106
 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
 Frame = +1

Query: 235 VPVSALRG-VEDDDDV--GFADREEAAYPRRRVLYGEQYISYKGVQASRPACTGSCAGRG 405
           +P+  LRG V D +DV     + EEAAYPRRR+LY  +Y SY G+  S+ AC GSC GRG
Sbjct: 31  LPMHVLRGRVADVEDVVASVVEEEEAAYPRRRILYDSRYASYNGLTESKAACYGSCPGRG 90

Query: 406 QPYTGSGCKAIFGCRG 453
           QPY+G  C  I+ C+G
Sbjct: 91  QPYSGRSCLNIYQCKG 106



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>AK099523:Os11g0449600 |
          Length = 104

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 28/82 (34%), Positives = 38/82 (46%)
 Frame = +1

Query: 208 GVLAGATHAVPVSALRGVEDDDDVGFADREEAAYPRRRVLYGEQYISYKGVQASRPACTG 387
           G L      V V+   G         ++ +   YP+RRVL G   + Y+ +     AC  
Sbjct: 24  GALTADHATVGVAVAGGKRTRHAEELSEMDSVPYPQRRVLQGGNTV-YRPLGRGA-ACNP 81

Query: 388 SCAGRGQPYTGSGCKAIFGCRG 453
            C GRG  YTG GCK+ + CRG
Sbjct: 82  ICPGRGDRYTGRGCKSRYQCRG 103



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>Os02g0670500:Os02g0670500 |
          Length = 153

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
 Frame = +1

Query: 256 GVEDDDDVGFADRE-EAAYPRRRVLYGEQYISYKGVQASRPACTGSCA--------GRGQ 408
           G  DDD  GF+    + A   RRVL G  YISY  ++     C+   A        G+  
Sbjct: 80  GSGDDDGFGFSGAAADGAAVVRRVLQGRGYISYGALRRDTTPCSVRGASYYNCRPGGQAN 139

Query: 409 PYTGSGCKAIFGCRG 453
           PY+  GC AI  CRG
Sbjct: 140 PYS-RGCSAITRCRG 153



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>AK067878:Os01g0357900 |
          Length = 117

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
 Frame = +1

Query: 256 GVEDDDDVGFADREEAAYPR---RRVLYGEQYISYKGVQASRPACTGSCA--------GR 402
           G  ++D  GF+  + AA      RRVL G+ YISY  ++     C+   A        G+
Sbjct: 42  GGGEEDSFGFSSEDAAADGAAVVRRVLQGQGYISYGALRRDTTPCSVRGASYYNCRPGGQ 101

Query: 403 GQPYTGSGCKAIFGCRG 453
             PY+  GC AI  CRG
Sbjct: 102 ANPYS-RGCSAITRCRG 117



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>AK063211:Os04g0383700 |
          Length = 112

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 22/62 (35%), Positives = 28/62 (45%)
 Frame = +1

Query: 256 GVEDDDDVGFADREEAAYPRRRVLYGEQYISYKGVQASRPACTGSCAGRGQPYTGSGCKA 435
           GV+DD ++            RRVL          + A R  C GSC+  G+PYTG G   
Sbjct: 57  GVDDDHEL-----------HRRVLQARGGYVDPSLVADRQRCIGSCSRPGRPYTGRGNLC 105

Query: 436 IF 441
           IF
Sbjct: 106 IF 107



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>AK119942:Os12g0571500 |
          Length = 143

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 37/106 (34%)
 Frame = +1

Query: 211 VLAGATHAVPVSALR------GVEDDDDVGFADREEAAYPRRRVLYGEQYI--------- 345
           V AGA  A   +A R      GV+DD DV  A  +   +P+RR    ++ +         
Sbjct: 24  VAAGAGTATDDAAGRRHCRVVGVDDDVDVAAALMDHDHHPQRRRRLEDEVVVETELPVVD 83

Query: 346 --------------------SYKGVQASRPAC--TGSCAGRGQPYT 417
                               SY  +  +RPAC   G CA RG+PYT
Sbjct: 84  GGGGGLAVRARRHYGGGGGFSYGCLSRARPACPRAGGCAARGRPYT 129



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>AK105209:Os01g0358100 |
          Length = 116

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 32/97 (32%), Positives = 39/97 (40%), Gaps = 12/97 (12%)
 Frame = +1

Query: 199 MSRGVLAGATHAVPVSALRGVEDDDDVGFADREEAAYPR----RRVLYGEQYISYKGVQA 366
           ++ G    A   VP+S   GV   DD      EEAA       RRVL    YISY  ++ 
Sbjct: 21  LATGGADAAPGEVPLSWELGVVGADDAFGFPGEEAADSATAVVRRVLQQGSYISYGALRR 80

Query: 367 SRPACTGSCA--------GRGQPYTGSGCKAIFGCRG 453
               C+   A            PY+  GC AI  CRG
Sbjct: 81  DTTPCSVRGASYYNCQPGAEANPYS-RGCSAITQCRG 116



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>Os06g0536800:Os06g0536800 |
          Length = 1335

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -1

Query: 451 RGSRRW-PCSRYRCRAAPGQRRSRCTPACSPAPLCS*CTARRKAPSS 314
           RG RRW P      RAA G RR+R  P+  P P       RR  PSS
Sbjct: 329 RGERRWWPVPAPPERAAAGSRRARARPSIPPLP-------RRACPSS 368



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>AK058855:Os12g0571700 |
          Length = 124

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
 Frame = +1

Query: 295 EEAAYPRRRVLYGEQYI----SYKGVQASRPACTG--SCAGRGQPYTGSGC 429
           +E  +P    + G + +    S+ G+ A++  C    SCA    PYTG GC
Sbjct: 66  DEVVFPAAMAVVGAEQLQQGGSFSGLTANKQVCLQGHSCAAFAMPYTGHGC 116



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>AK101770:Os01g0851300 |
          Length = 67

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
 Frame = -1

Query: 448 GSRRWPCSRYRCRAAPGQR-----RSRCTPACSPAPLCS 347
           G RRWP  R+R    PG        +RC+P+C   P CS
Sbjct: 32  GGRRWPAGRWRRWRRPGSSSIACLATRCSPSC---PACS 67



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>AK062807:Os04g0382900 |
          Length = 134

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +1

Query: 364 ASRPACTGSCAGRGQPYTGSGCKAIF 441
           A R  C GSC  RG  YTG G + I+
Sbjct: 104 ADRQRCIGSCPARGGSYTGRGNQCIY 129



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>Os03g0325900:Os03g0325900 |
          Length = 467

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 337 QYISYKGVQASRPACTGSCAGRGQPYTGSGCKAIF 441
           Q +  +G  +++P CT +C  RG P    G +  F
Sbjct: 150 QVVRIRGEVSTKPICTSACTRRGSPSPSPGMEHAF 184



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>AK105568:Os11g0176000 |
          Length = 522

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 9/55 (16%)
 Frame = +3

Query: 54  VLWLIIKREGSSSLEHRPQCS---------AAASLGRRDNEAANATAPLGFHHRS 191
           +LW + K E + SL H   CS         A++S G    E  +   PLGF H S
Sbjct: 379 LLWDLTKDELNVSLTHASSCSESSSSGSCSASSSSGSSSTEDRDKEFPLGFLHPS 433



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>AK107647: |
          Length = 318

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
 Frame = -2

Query: 246 GHRYRVGGAGEDAAAHDQRCGDGSQE-------EQLRLQLHCLSFQAM-LPHCTAACAPK 91
           GH+ + GG     +    R GDG+QE       +Q R    C+   A+    C AACA +
Sbjct: 47  GHQGQGGGGARRTSGQAGRAGDGAQEPREGEPGQQQRAGRECVGAYAVDGGACGAACARR 106

Query: 90  R 88
           R
Sbjct: 107 R 107



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>AK073461:Os02g0512400 |
          Length = 135

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 233 AWVAPARTPRLMISAAVMEAKRSSCVCSFIVSPSKRCC 120
           AW  PA  P  M+ +AV   +R +   + +V     CC
Sbjct: 10  AWYMPAAAPAPMVESAVARVERLASESAVVVFSVSSCC 47



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>AK108505:Os06g0633500 |
          Length = 124

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = -2

Query: 231 VGGAGEDAAAHDQRCG---DGSQEEQLRLQLHC 142
           VGG GE+AAA  + C    DG  + +L  QL C
Sbjct: 36  VGGGGEEAAAASRGCAVCKDGIAQGELATQLPC 68



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>AK103420:Os12g0541700 |
          Length = 127

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
 Frame = +1

Query: 265 DDDDVGFADREEAAYPRRRVLYGEQYISYKGVQASRPACTGSCA--------GRGQPYTG 420
           ++ ++G A  E      RRVL G  YISY+ ++     C+   A            PY  
Sbjct: 62  EEGELGSASGEA----HRRVLAGRGYISYQSLRRDSVPCSRRGASYYNCRPGASANPY-H 116

Query: 421 SGCKAIFGCRG 453
            GC  I  CRG
Sbjct: 117 RGCSRITRCRG 127



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>Os08g0557300:Os08g0557300 |
          Length = 300

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 240 RYRVGGAGEDAAAHDQRCGDGSQEEQLRLQL 148
           R+R GGA  + A H  R G G  E ++R+ +
Sbjct: 182 RFREGGAEHEVAVHATRGGGGGGEGEVRVSI 212



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>AK110157: |
          Length = 1041

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = +3

Query: 87  SSLEHRPQCSAAASLGRRDNEAANAT---APLGFHHR 188
           SS +  P  S  AS+GRR    + AT   A  G HHR
Sbjct: 441 SSHDSSPSTSPKASIGRRQRGVSEATAGGAHAGHHHR 477



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>AK099732:Os10g0518300 |
          Length = 472

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 21/69 (30%), Positives = 29/69 (42%)
 Frame = +1

Query: 244 SALRGVEDDDDVGFADREEAAYPRRRVLYGEQYISYKGVQASRPACTGSCAGRGQPYTGS 423
           +A  G  D  +VG  + EE   PR   +  E+  +  G + SRP          +   GS
Sbjct: 9   TARGGAADGVEVGVEEEEEP--PRSATVKQEEANAVLGAEGSRPFAMRELKEDHEVAAGS 66

Query: 424 GCKAIFGCR 450
           G KA  G R
Sbjct: 67  GVKAASGER 75



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>AK060414:Os06g0115700 |
          Length = 165

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = -1

Query: 445 SRRWPCSRYRCRAAPGQRRSRCTPACSPAPLCS*CTARRKAPSS 314
           SRRWP      R     R  R  P  + AP  S C A  +APS+
Sbjct: 30  SRRWPSPTRSWRG----RTRRTGPWAASAPSASACRAASRAPST 69



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>AK068503:Os03g0336300 |
          Length = 1040

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +1

Query: 256 GVEDDDDVGFADREEAAYPRRRVLYGEQYISYKGVQASRPACTGSCA 396
           G +D+DD G  D E+ + P+RR   G      K   A+     GS A
Sbjct: 86  GEDDEDDEGEEDEEDGSEPKRRKEKGSSEPLVKKAAAAMCVGMGSFA 132


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 18,119,199
Number of extensions: 409235
Number of successful extensions: 1415
Number of sequences better than 10.0: 22
Number of HSP's gapped: 1407
Number of HSP's successfully gapped: 23
Length of query: 220
Length of database: 15,399,855
Length adjustment: 97
Effective length of query: 123
Effective length of database: 11,515,878
Effective search space: 1416452994
Effective search space used: 1416452994
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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