ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf70e20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q01482:WIR1A_WHEAT WIR1A protein - Triticum aestivum (Wheat) 37 0.085
2Q01481:WIR1B_WHEAT WIR1B protein - Triticum aestivum (Wheat) 35 0.19
3O15197:EPHB6_HUMAN Ephrin type-B receptor 6 precursor - Homo sap... 30 6.1

>Q01482:WIR1A_WHEAT WIR1A protein - Triticum aestivum (Wheat)|
          Length = 88
 Score = 36.6 bits (83), Expect = 0.085
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +1

Query: 397 GRGQPYTGSGCKAIFGCR 450
           G GQPYTG GC+ ++GCR
Sbjct: 64  GAGQPYTGRGCRTVYGCR 81



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>Q01481:WIR1B_WHEAT WIR1B protein - Triticum aestivum (Wheat)|
          Length = 85

 Score = 35.4 bits (80), Expect = 0.19
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 397 GRGQPYTGSGCKAIFGCR 450
           G GQPYTG GC+ ++GC+
Sbjct: 61  GAGQPYTGRGCRTVYGCK 78



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>O15197:EPHB6_HUMAN Ephrin type-B receptor 6 precursor - Homo sapiens (Human)|
          Length = 1006

 Score = 30.4 bits (67), Expect = 6.1
 Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 11/65 (16%)
 Frame = -1

Query: 478 LHCR*LINARGSRRWPCSRYRCRAAPGQRRSRCTPACSPAPL-----------CS*CTAR 332
           LHC       G  +W  +   CR  PG + +R   AC   P            CS C AR
Sbjct: 269 LHCN------GEGKWMVAVGGCRCQPGYQPARGDKACQACPRGLYKSSAGNAPCSPCPAR 322

Query: 331 RKAPS 317
             AP+
Sbjct: 323 SHAPN 327


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 105,124,344
Number of extensions: 2188663
Number of successful extensions: 5452
Number of sequences better than 10.0: 3
Number of HSP's gapped: 5446
Number of HSP's successfully gapped: 3
Length of query: 220
Length of database: 100,686,439
Length adjustment: 109
Effective length of query: 111
Effective length of database: 70,788,284
Effective search space: 7857499524
Effective search space used: 7857499524
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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