| Clone Name | FLbaf66p01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ001160.1|HVJ001160 Hordeum vulgare L41 ribosomal protein Length = 387 Score = 607 bits (306), Expect = e-170 Identities = 358/374 (95%), Gaps = 1/374 (0%) Strand = Plus / Plus Query: 28 cacacacctccgccgccgtctccgccgctgcgaaccggagagcgaggccgactccgacgc 87 |||||||| || |||||| | ||||||| ||||||||||| ||||||||||||||||||| Sbjct: 15 cacacaccgcccccgccgccgccgccgccgcgaaccggagtgcgaggccgactccgacgc 74 Query: 88 cgcgatgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75 cgcgatgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaa 134 Query: 148 gatgaggcagcgatccaagtaggcgccttggagcagggaatgcatcatctttacatcagg 207 ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| Sbjct: 135 gatgaggcagcgatccaagtaggcgccttggaggatggaatgcatcttctttacatcagg 194 Query: 208 cagctaggcaccgagggatgacggcatgatctagtgattcctgatgtgtttgctgttatg 267 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 195 cagcgaggcaccgagggatgacggcatggtctagtgattcctgatgtgtttgctgttatg 254 Query: 268 gctgtggaagttgtttaacctgcgtttggtcaaatttagctgtttaatactagtctggtt 327 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 gctgtggaggttgtttaacctgcgtttggtcaaatttagctgtttaatactagtctggtt 314 Query: 328 atgttccaggactgagttttatgtaatgtgaggattatgcgtggttgtgactgaatttta 387 |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 315 atgttccaggactgagttttatgtaatgtgaggattatatgt-gttgtgactgaatttta 373 Query: 388 tgcagctattaatt 401 ||||| |||||||| Sbjct: 374 tgcaggtattaatt 387
>dbj|AK243070.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100017E12, full insert sequence Length = 400 Score = 153 bits (77), Expect = 6e-34 Identities = 83/85 (97%) Strand = Plus / Plus Query: 85 cgccgcgatgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccg 144 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 89 cgccgcgatgagggccaagtggaagaagaagagaatgaggaggctcaagaggaagcgccg 148 Query: 145 aaagatgaggcagcgatccaagtag 169 ||||||||||||| ||||||||||| Sbjct: 149 aaagatgaggcagagatccaagtag 173
>emb|CT828400.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI019P21, full insert sequence Length = 371 Score = 151 bits (76), Expect = 2e-33 Identities = 82/84 (97%) Strand = Plus / Plus Query: 85 cgccgcgatgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccg 144 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 81 cgccgcgatgagggccaagtggaagaagaagaggatgaggcggctcaagaggaagcgccg 140 Query: 145 aaagatgaggcagcgatccaagta 168 ||||||||||||| |||||||||| Sbjct: 141 aaagatgaggcagagatccaagta 164
>ref|NM_001065396.1| Oryza sativa (japonica cultivar-group) Os07g0139600 (Os07g0139600) mRNA, partial cds Length = 366 Score = 151 bits (76), Expect = 2e-33 Identities = 82/84 (97%) Strand = Plus / Plus Query: 85 cgccgcgatgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccg 144 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 79 cgccgcgatgagggccaagtggaagaagaagaggatgaggcggctcaagaggaagcgccg 138 Query: 145 aaagatgaggcagcgatccaagta 168 ||||||||||||| |||||||||| Sbjct: 139 aaagatgaggcagagatccaagta 162
>dbj|AK103216.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122N15, full insert sequence Length = 368 Score = 151 bits (76), Expect = 2e-33 Identities = 82/84 (97%) Strand = Plus / Plus Query: 85 cgccgcgatgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccg 144 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 81 cgccgcgatgagggccaagtggaagaagaagaggatgaggcggctcaagaggaagcgccg 140 Query: 145 aaagatgaggcagcgatccaagta 168 ||||||||||||| |||||||||| Sbjct: 141 aaagatgaggcagagatccaagta 164
>ref|NM_001057994.1| Oryza sativa (japonica cultivar-group) Os03g0781500 (Os03g0781500) mRNA, complete cds Length = 78 Score = 139 bits (70), Expect = 9e-30 Identities = 76/78 (97%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1 atgagggccaagtggaagaagaagagaatgaggaggctcaagaggaagcgccgaaagatg 60 Query: 152 aggcagcgatccaagtag 169 |||||| ||||||||||| Sbjct: 61 aggcagagatccaagtag 78
>gb|AY389730.1| Hyacinthus orientalis unknown mRNA, 3' UTR Length = 319 Score = 129 bits (65), Expect = 9e-27 Identities = 77/81 (95%) Strand = Plus / Plus Query: 90 cgatgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaaga 149 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 55 cgatgagggccaagtggaagaagaagcgcatgaggaggctcaagaggaagcgccgaaaga 114 Query: 150 tgaggcagcgatccaagtagg 170 |||| ||| |||||||||||| Sbjct: 115 tgagacagagatccaagtagg 135
>gb|AY109387.1| Zea mays CL2281_2 mRNA sequence Length = 2673 Score = 127 bits (64), Expect = 4e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 |||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||| Sbjct: 372 atgagggccaagtggaagaagaagcgcatgaggaggctcaagaggaagcgcagaaagatg 313 Query: 152 aggcagcgatccaagtaggc 171 |||||| ||||||||||||| Sbjct: 312 aggcagagatccaagtaggc 293
>gb|AY109380.1| Zea mays CL2281_1 mRNA sequence Length = 1446 Score = 127 bits (64), Expect = 4e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| Sbjct: 349 atgagggccaagtggaagaagaagcgcatgaggaggctgaagaggaagcgccgaaagatg 290 Query: 152 aggcagcgatccaagtaggc 171 |||||| ||||||||||||| Sbjct: 289 aggcagagatccaagtaggc 270
>emb|CT833326.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN029H24, full insert sequence Length = 395 Score = 121 bits (61), Expect = 2e-24 Identities = 76/81 (93%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| Sbjct: 70 atgagggccaagtggaagaagaagcgcatgaggaggctgaagaggaagcgccgaaagatg 129 Query: 152 aggcagcgatccaagtaggcg 172 |||||| |||| ||||||||| Sbjct: 130 aggcagagatctaagtaggcg 150
>dbj|AK105083.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F02, full insert sequence Length = 441 Score = 121 bits (61), Expect = 2e-24 Identities = 76/81 (93%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| Sbjct: 64 atgagggccaagtggaagaagaagcgcatgaggaggctgaagaggaagcgccgaaagatg 123 Query: 152 aggcagcgatccaagtaggcg 172 |||||| |||| ||||||||| Sbjct: 124 aggcagagatctaagtaggcg 144
>emb|CT835228.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA041G24, full insert sequence Length = 1429 Score = 119 bits (60), Expect = 9e-24 Identities = 66/68 (97%) Strand = Plus / Plus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1135 agtggaagaagaagagaatgaggaggctcaagaggaagcgccgaaagatgaggcagagat 1194 Query: 162 ccaagtag 169 |||||||| Sbjct: 1195 ccaagtag 1202
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 119 bits (60), Expect = 9e-24 Identities = 66/68 (97%) Strand = Plus / Minus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95899 agtggaagaagaagagaatgaggaggctcaagaggaagcgccgaaagatgaggcagagat 95840 Query: 162 ccaagtag 169 |||||||| Sbjct: 95839 ccaagtag 95832
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 119 bits (60), Expect = 9e-24 Identities = 66/68 (97%) Strand = Plus / Minus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 32185286 agtggaagaagaagagaatgaggaggctcaagaggaagcgccgaaagatgaggcagagat 32185227 Query: 162 ccaagtag 169 |||||||| Sbjct: 32185226 ccaagtag 32185219 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ccgccgccgtctccgccgct 56 |||||||||||||||||||| Sbjct: 9767377 ccgccgccgtctccgccgct 9767396
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 117 bits (59), Expect = 3e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 2125200 agtggaagaagaagaggatgaggcggctcaagaggaagcgccgaaagatgaggcagagat 2125141 Query: 162 ccaagta 168 ||||||| Sbjct: 2125140 ccaagta 2125134 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 cacctccgccgccgtctccgccgc 55 |||||||||||||| ||||||||| Sbjct: 25273862 cacctccgccgccgcctccgccgc 25273885
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 117 bits (59), Expect = 3e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 80993 agtggaagaagaagaggatgaggcggctcaagaggaagcgccgaaagatgaggcagagat 80934 Query: 162 ccaagta 168 ||||||| Sbjct: 80933 ccaagta 80927
>gb|BT017654.1| Zea mays clone EL01N0440A06.c mRNA sequence Length = 384 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 88 cgcgatgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaa 147 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct: 80 cgcgatgcgggccaagtggaagaagaagaggatgcggaggctcaagaggaagcgccggaa 139 Query: 148 gatgaggcagcgatccaagtaggcgc 173 ||||||||| ||| |||||||||| Sbjct: 140 aatgaggcagagatttaagtaggcgc 165
>emb|X75423.1|GHRP60S G.hirsutum mRNA for ribosomal protein 41, large subunit (RL41) Length = 449 Score = 111 bits (56), Expect = 2e-21 Identities = 83/91 (91%), Gaps = 2/91 (2%) Strand = Plus / Plus Query: 91 gatgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagat 150 |||||| |||||||||||||||||| | ||||||||||| |||||||||||||||||||| Sbjct: 50 gatgagagccaagtggaagaagaagcgtatgaggaggctgaagaggaagcgccgaaagat 109 Query: 151 gaggcagcgatccaagtag--gcgccttgga 179 ||| ||| ||||||||||| |||||||||| Sbjct: 110 gagacagagatccaagtagatgcgccttgga 140
>gb|L47967.1|PEARPL41A Pisum sativum (clone PsRCI35-2) ribosomal protein L41 mRNA, complete cds Length = 352 Score = 109 bits (55), Expect = 8e-21 Identities = 76/83 (91%) Strand = Plus / Plus Query: 87 ccgcgatgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaa 146 |||| |||||||||||||||||||||||| | ||||||||| | |||||||||||||||| Sbjct: 50 ccgcaatgagggccaagtggaagaagaagcgtatgaggaggttgaagaggaagcgccgaa 109 Query: 147 agatgaggcagcgatccaagtag 169 ||||||| ||| ||||||||||| Sbjct: 110 agatgagacagagatccaagtag 132
>dbj|AK228017.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-53-M06 Length = 284 Score = 107 bits (54), Expect = 3e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| |||||||||||||||||| | |||||||| || ||||||||||||||||||||| Sbjct: 36 atgagagccaagtggaagaagaagcgtatgaggagactaaagaggaagcgccgaaagatg 95 Query: 152 aggcagcgatccaagtag 169 || ||||||||||||||| Sbjct: 96 agacagcgatccaagtag 113
>emb|CT986418.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 426 Score = 107 bits (54), Expect = 3e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| Sbjct: 76 atgagggccaagtggaagaagaagcgtatgaggaggcttaagaggaagcgccgaaagatg 135 Query: 152 aggcag 157 |||||| Sbjct: 136 aggcag 141
>emb|CT985561.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 373 Score = 107 bits (54), Expect = 3e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| Sbjct: 76 atgagggccaagtggaagaagaagcgtatgaggaggcttaagaggaagcgccgaaagatg 135 Query: 152 aggcag 157 |||||| Sbjct: 136 aggcag 141
>emb|CT982642.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 373 Score = 107 bits (54), Expect = 3e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| Sbjct: 76 atgagggccaagtggaagaagaagcgtatgaggaggcttaagaggaagcgccgaaagatg 135 Query: 152 aggcag 157 |||||| Sbjct: 136 aggcag 141
>emb|CT982073.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 373 Score = 107 bits (54), Expect = 3e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| Sbjct: 76 atgagggccaagtggaagaagaagcgtatgaggaggcttaagaggaagcgccgaaagatg 135 Query: 152 aggcag 157 |||||| Sbjct: 136 aggcag 141
>dbj|AK119085.1| Arabidopsis thaliana mRNA, clone: RAFL21-43-M07 Length = 340 Score = 107 bits (54), Expect = 3e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| |||||||||||||||||| | |||||||| || ||||||||||||||||||||| Sbjct: 36 atgagagccaagtggaagaagaagcgtatgaggagactaaagaggaagcgccgaaagatg 95 Query: 152 aggcagcgatccaagtag 169 || ||||||||||||||| Sbjct: 96 agacagcgatccaagtag 113
>gb|AY109353.1| Zea mays CL1155_2 mRNA sequence Length = 1048 Score = 105 bits (53), Expect = 1e-19 Identities = 80/88 (90%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 88 cgcgatgagggccaag--tggaagaagaagaggatgaggaggctcaagaggaagcgccga 145 ||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 251 cgcgatgcgggccaagnntggaagaagaagaggatgcggaggctcaagaggaagcgccgg 192 Query: 146 aagatgaggcagcgatccaagtaggcgc 173 || ||||||||| |||| |||||||||| Sbjct: 191 aaaatgaggcagagatctaagtaggcgc 164
>dbj|D50573.1| Oryza sativa mRNA, similar to ribosomal protein 41 Length = 125 Score = 103 bits (52), Expect = 5e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 95 agggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgagg 154 ||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||| Sbjct: 50 agggccaagtggaagaagaagcgcatgaggaggctgaagaggaagcgccgaaagatgagg 109 Query: 155 cagcgatccaagtagg 170 ||| | || ||||||| Sbjct: 110 cagagttctaagtagg 125
>ref|NM_001067453.1| Oryza sativa (japonica cultivar-group) Os08g0129800 (Os08g0129800) mRNA, complete cds Length = 1652 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | ||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 1337 agtggaagaagaagcgcatgaggaggctgaagaggaagcgccgaaagatgaggcagagat 1396 Query: 162 ccaagtaggcg 172 | ||||||||| Sbjct: 1397 ctaagtaggcg 1407
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | ||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 1670035 agtggaagaagaagcgcatgaggaggctgaagaggaagcgccgaaagatgaggcagagat 1670094 Query: 162 ccaagtaggcg 172 | ||||||||| Sbjct: 1670095 ctaagtaggcg 1670105
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | ||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 69535 agtggaagaagaagcgcatgaggaggctgaagaggaagcgccgaaagatgaggcagagat 69594 Query: 162 ccaagtaggcg 172 | ||||||||| Sbjct: 69595 ctaagtaggcg 69605
>dbj|AK065009.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E24, full insert sequence Length = 1653 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | ||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 1338 agtggaagaagaagcgcatgaggaggctgaagaggaagcgccgaaagatgaggcagagat 1397 Query: 162 ccaagtaggcg 172 | ||||||||| Sbjct: 1398 ctaagtaggcg 1408
>dbj|AK224756.1| Solanum lycopersicum cDNA, clone: FC12DH04, HTC in fruit Length = 370 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| |||||||||||||||||| | |||||||| | ||||||||||||||||||||| Sbjct: 70 atgagagccaagtggaagaagaagcgtatgaggagattgaagaggaagcgccgaaagatg 129 Query: 152 aggcagcgatccaagtag 169 |||||| ||||||||||| Sbjct: 130 aggcagagatccaagtag 147
>gb|AY110776.1| Zea mays CL1882_28 mRNA sequence Length = 877 Score = 99.6 bits (50), Expect = 8e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| | | Sbjct: 227 agtggaagaagaagcggatgaggcggcttaagaggaagcgccgaaagatgaggcagaggt 168 Query: 162 ccaagtaggc 171 |||||||||| Sbjct: 167 ccaagtaggc 158
>dbj|AK105533.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-G12, full insert sequence Length = 1726 Score = 97.6 bits (49), Expect = 3e-17 Identities = 74/81 (91%), Gaps = 1/81 (1%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 |||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||| Sbjct: 68 atgagggccaagtggaagaagaagcgcatgaggaggct-gagaggaagcgccgaaagatg 126 Query: 152 aggcagcgatccaagtaggcg 172 | |||| |||| ||||||||| Sbjct: 127 aagcagagatctaagtaggcg 147
>dbj|AB026645.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGH6 Length = 81020 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | |||||||| || ||||||||||||||||||||||| ||||||| Sbjct: 27640 agtggaagaagaagcgtatgaggagactaaagaggaagcgccgaaagatgagacagcgat 27581 Query: 162 ccaagtag 169 |||||||| Sbjct: 27580 ccaagtag 27573
>dbj|AP004467.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06K11, TM0002, complete sequence Length = 106023 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | ||||||||||| ||||||||||||||||||||||| ||| ||| Sbjct: 58316 agtggaagaagaagcgtatgaggaggctgaagaggaagcgccgaaagatgagacagagat 58257 Query: 162 ccaagtag 169 |||||||| Sbjct: 58256 ccaagtag 58249
>gb|U26255.1|NTU26255 Nicotiana tabacum ribosomal protein L41 mRNA, complete cds Length = 366 Score = 93.7 bits (47), Expect = 5e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 91 gatgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagat 150 ||||||||||||||||||||||||| | |||||||| || |||||||||||| ||||||| Sbjct: 18 gatgagggccaagtggaagaagaagcgtatgaggagactgaagaggaagcgcagaaagat 77 Query: 151 gaggcagcgatccaagtag 169 ||| ||| |||| |||||| Sbjct: 78 gagacagagatctaagtag 96
>emb|CT986361.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 708 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| |||||||||||||||||| | ||||||||| | |||||||||||| |||||||| Sbjct: 401 atgagagccaagtggaagaagaagcgcatgaggaggttgaagaggaagcgcagaaagatg 460 Query: 152 aggcagcgatccaagtag 169 |||||| |||| |||||| Sbjct: 461 aggcagagatcgaagtag 478
>emb|CT986333.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 483 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| |||||||||||||||||| | ||||||||| | |||||||||||| |||||||| Sbjct: 200 atgagagccaagtggaagaagaagcgcatgaggaggttgaagaggaagcgcagaaagatg 259 Query: 152 aggcagcgatccaagtag 169 |||||| |||| |||||| Sbjct: 260 aggcagagatcgaagtag 277
>emb|CT984092.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 416 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| |||||||||||||||||| | ||||||||| | |||||||||||| |||||||| Sbjct: 84 atgagagccaagtggaagaagaagcgcatgaggaggttgaagaggaagcgcagaaagatg 143 Query: 152 aggcagcgatccaagtag 169 |||||| |||| |||||| Sbjct: 144 aggcagagatcgaagtag 161
>emb|CT983864.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 745 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| |||||||||||||||||| | ||||||||| | |||||||||||| |||||||| Sbjct: 422 atgagagccaagtggaagaagaagcgcatgaggaggttgaagaggaagcgcagaaagatg 481 Query: 152 aggcagcgatccaagtag 169 |||||| |||| |||||| Sbjct: 482 aggcagagatcgaagtag 499
>emb|CT983177.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 708 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| |||||||||||||||||| | ||||||||| | |||||||||||| |||||||| Sbjct: 401 atgagagccaagtggaagaagaagcgcatgaggaggttgaagaggaagcgcagaaagatg 460 Query: 152 aggcagcgatccaagtag 169 |||||| |||| |||||| Sbjct: 461 aggcagagatcgaagtag 478
>emb|CT983036.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 483 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| |||||||||||||||||| | ||||||||| | |||||||||||| |||||||| Sbjct: 200 atgagagccaagtggaagaagaagcgcatgaggaggttgaagaggaagcgcagaaagatg 259 Query: 152 aggcagcgatccaagtag 169 |||||| |||| |||||| Sbjct: 260 aggcagagatcgaagtag 277
>emb|CT981388.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 708 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| |||||||||||||||||| | ||||||||| | |||||||||||| |||||||| Sbjct: 400 atgagagccaagtggaagaagaagcgcatgaggaggttgaagaggaagcgcagaaagatg 459 Query: 152 aggcagcgatccaagtag 169 |||||| |||| |||||| Sbjct: 460 aggcagagatcgaagtag 477
>emb|Z93058.1|SLZ93058 S.latifolia mRNA, clone CCLS 17 Length = 410 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| |||||||||||||||||||| ||||||||| | |||||||||||| |||||||| Sbjct: 58 atgagagccaagtggaagaagaagagaatgaggaggttgaagaggaagcgcagaaagatg 117 Query: 152 aggcagcgatccaagtag 169 || ||| |||| |||||| Sbjct: 118 agacagagatctaagtag 135
>emb|AJ312773.1|CSA312773 Cucumis sativus mRNA for MADS1 protein (m1 gene) Length = 1345 Score = 89.7 bits (45), Expect = 8e-15 Identities = 63/69 (91%) Strand = Plus / Minus Query: 101 aagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcga 160 ||||||||||||||||| ||||||||| | ||||| ||||||||||||||||||||| || Sbjct: 297 aagtggaagaagaagagaatgaggaggttgaagagaaagcgccgaaagatgaggcagaga 238 Query: 161 tccaagtag 169 || |||||| Sbjct: 237 tcgaagtag 229
>gb|AC142498.21| Medicago truncatula clone mth2-24a18, complete sequence Length = 114956 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | ||||||||| | ||||||||||||||||||||||| ||| ||| Sbjct: 87656 agtggaagaagaagcgtatgaggaggttgaagaggaagcgccgaaagatgagacagagat 87597 Query: 162 ccaagtag 169 |||||||| Sbjct: 87596 ccaagtag 87589
>emb|CT573029.5| M.truncatula DNA sequence from clone MTH2-67H11 on chromosome 3, complete sequence Length = 152399 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | ||||||||| | ||||||||||||||||||||||| ||| ||| Sbjct: 22722 agtggaagaagaagcgtatgaggaggttgaagaggaagcgccgaaagatgagacagagat 22781 Query: 162 ccaagtag 169 |||||||| Sbjct: 22782 ccaagtag 22789
>dbj|AK220574.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-86-K14 Length = 294 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 87 ccgcgatgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaa 146 |||| ||||| || ||||||||||||||| | ||||||||||| ||||||||| | |||| Sbjct: 49 ccgccatgagagctaagtggaagaagaagcgaatgaggaggctgaagaggaagagacgaa 108 Query: 147 agatgaggcagcgatccaagtag 169 ||||||| |||||||| |||||| Sbjct: 109 agatgagacagcgatctaagtag 131
>gb|AY062780.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 268 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 87 ccgcgatgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaa 146 |||| ||||| || ||||||||||||||| | ||||||||||| ||||||||| | |||| Sbjct: 52 ccgccatgagagctaagtggaagaagaagcgaatgaggaggctgaagaggaagagacgaa 111 Query: 147 agatgaggcagcgatccaagtag 169 ||||||| |||||||| |||||| Sbjct: 112 agatgagacagcgatctaagtag 134
>emb|BX819099.1|CNS0AA35 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB46ZD03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 274 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 87 ccgcgatgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaa 146 |||| ||||| || ||||||||||||||| | ||||||||||| ||||||||| | |||| Sbjct: 41 ccgccatgagagctaagtggaagaagaagcgaatgaggaggctgaagaggaagagacgaa 100 Query: 147 agatgaggcagcgatccaagtag 169 ||||||| |||||||| |||||| Sbjct: 101 agatgagacagcgatctaagtag 123
>dbj|AK224825.1| Solanum lycopersicum cDNA, clone: FC19DF10, HTC in fruit Length = 304 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| || ||||||||||||||| | ||||||||| | ||||||||||||||||||||| Sbjct: 33 atgagagctaagtggaagaagaagcgtatgaggaggttgaagaggaagcgccgaaagatg 92 Query: 152 aggcagcgatccaagtag 169 || ||| |||| |||||| Sbjct: 93 agacagagatcgaagtag 110
>dbj|AK224627.1| Solanum lycopersicum cDNA, clone: FC03CE08, HTC in fruit Length = 273 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| || ||||||||||||||| | ||||||||| | ||||||||||||||||||||| Sbjct: 33 atgagagctaagtggaagaagaagcgtatgaggaggttgaagaggaagcgccgaaagatg 92 Query: 152 aggcagcgatccaagtag 169 || ||| |||| |||||| Sbjct: 93 agacagagatcgaagtag 110
>ref|NM_202310.1| Arabidopsis thaliana structural constituent of ribosome (AT1G56045) mRNA, complete cds Length = 336 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| || ||||||||||||||| | |||||||| | ||||||||||| ||||||||| Sbjct: 63 atgagagcgaagtggaagaagaagcgcatgaggagattaaagaggaagcgtcgaaagatg 122 Query: 152 aggcagcgatccaagtag 169 || ||||||||||||||| Sbjct: 123 agacagcgatccaagtag 140
>ref|NM_179997.1| Arabidopsis thaliana structural constituent of ribosome (AT2G40205) mRNA, complete cds Length = 116 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| || ||||||||||||||| | ||||||||||| ||||||||| | ||||||||| Sbjct: 1 atgagagctaagtggaagaagaagcgaatgaggaggctgaagaggaagagacgaaagatg 60 Query: 152 aggcagcgatccaagtag 169 || |||||||| |||||| Sbjct: 61 agacagcgatctaagtag 78
>gb|AY136332.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 335 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| || ||||||||||||||| | |||||||| | ||||||||||| ||||||||| Sbjct: 63 atgagagcgaagtggaagaagaagcgcatgaggagattaaagaggaagcgtcgaaagatg 122 Query: 152 aggcagcgatccaagtag 169 || ||||||||||||||| Sbjct: 123 agacagcgatccaagtag 140
>dbj|AK221331.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL25-17-C23 Length = 265 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 91 gatgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagat 150 |||||| |||||||||||||||||| | ||||||||||| ||||||||| | |||||||| Sbjct: 45 gatgagagccaagtggaagaagaagcgtatgaggaggcttaagaggaagagacgaaagat 104 Query: 151 gaggcagcgatccaagta 168 ||| ||||| || ||||| Sbjct: 105 gagacagcgttctaagta 122
>gb|AY081623.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 116 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| || ||||||||||||||| | ||||||||||| ||||||||| | ||||||||| Sbjct: 1 atgagagctaagtggaagaagaagcgaatgaggaggctgaagaggaagagacgaaagatg 60 Query: 152 aggcagcgatccaagtag 169 || |||||||| |||||| Sbjct: 61 agacagcgatctaagtag 78
>gb|DQ108882.1| Arabidopsis thaliana clone 8951 mRNA sequence Length = 302 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 91 gatgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagat 150 |||||| |||||||||||||||||| | ||||||||||| ||||||||| | |||||||| Sbjct: 75 gatgagagccaagtggaagaagaagcgtatgaggaggcttaagaggaagagacgaaagat 134 Query: 151 gaggcagcgatccaagta 168 ||| ||||| || ||||| Sbjct: 135 gagacagcgttctaagta 152
>dbj|AK176691.1| Arabidopsis thaliana mRNA for 60S ribosomal protein L41, complete cds, clone: RAFL25-23-J19 Length = 327 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| || ||||||||||||||| | |||||||| | ||||||||||| ||||||||| Sbjct: 57 atgagagcgaagtggaagaagaagcgcatgaggagattaaagaggaagcgtcgaaagatg 116 Query: 152 aggcagcgatccaagtag 169 || ||||||||||||||| Sbjct: 117 agacagcgatccaagtag 134
>dbj|AK176659.1| Arabidopsis thaliana mRNA for 60S ribosomal protein L41, complete cds, clone: RAFL25-20-A17 Length = 329 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| || ||||||||||||||| | |||||||| | ||||||||||| ||||||||| Sbjct: 59 atgagagcgaagtggaagaagaagcgcatgaggagattaaagaggaagcgtcgaaagatg 118 Query: 152 aggcagcgatccaagtag 169 || ||||||||||||||| Sbjct: 119 agacagcgatccaagtag 136
>dbj|AK175999.1| Arabidopsis thaliana mRNA for 60S ribosomal protein L41, complete cds, clone: RAFL22-69-G11 Length = 318 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| || ||||||||||||||| | |||||||| | ||||||||||| ||||||||| Sbjct: 48 atgagagcgaagtggaagaagaagcgcatgaggagattaaagaggaagcgtcgaaagatg 107 Query: 152 aggcagcgatccaagtag 169 || ||||||||||||||| Sbjct: 108 agacagcgatccaagtag 125
>dbj|AK175302.1| Arabidopsis thaliana mRNA for 60S ribosomal protein L41, complete cds, clone: RAFL21-73-L08 Length = 251 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| || ||||||||||||||| | |||||||| | ||||||||||| ||||||||| Sbjct: 63 atgagagcgaagtggaagaagaagcgcatgaggagattaaagaggaagcgtcgaaagatg 122 Query: 152 aggcagcgatccaagtag 169 || ||||||||||||||| Sbjct: 123 agacagcgatccaagtag 140
>dbj|AK175240.1| Arabidopsis thaliana mRNA for 60S ribosomal protein L41, partial cds, clone: RAFL21-66-O04 Length = 288 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| || ||||||||||||||| | |||||||| | ||||||||||| ||||||||| Sbjct: 20 atgagagcgaagtggaagaagaagcgcatgaggagattaaagaggaagcgtcgaaagatg 79 Query: 152 aggcagcgatccaagtag 169 || ||||||||||||||| Sbjct: 80 agacagcgatccaagtag 97
>dbj|AK175122.1| Arabidopsis thaliana mRNA for 60S ribosomal protein L41, complete cds, clone: RAFL21-53-I07 Length = 327 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| || ||||||||||||||| | |||||||| | ||||||||||| ||||||||| Sbjct: 57 atgagagcgaagtggaagaagaagcgcatgaggagattaaagaggaagcgtcgaaagatg 116 Query: 152 aggcagcgatccaagtag 169 || ||||||||||||||| Sbjct: 117 agacagcgatccaagtag 134
>dbj|AK119120.1| Arabidopsis thaliana mRNA, clone: RAFL21-47-L17 Length = 317 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| || ||||||||||||||| | |||||||| | ||||||||||| ||||||||| Sbjct: 57 atgagagcgaagtggaagaagaagcgcatgaggagattaaagaggaagcgtcgaaagatg 116 Query: 152 aggcagcgatccaagtag 169 || ||||||||||||||| Sbjct: 117 agacagcgatccaagtag 134
>emb|BX813894.1|CNS0AC53 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB45ZG01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 306 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| || ||||||||||||||| | |||||||| | ||||||||||| ||||||||| Sbjct: 44 atgagagcgaagtggaagaagaagcgcatgaggagattaaagaggaagcgtcgaaagatg 103 Query: 152 aggcagcgatccaagtag 169 || ||||||||||||||| Sbjct: 104 agacagcgatccaagtag 121
>gb|BT002078.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 124 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| || ||||||||||||||| | |||||||| | ||||||||||| ||||||||| Sbjct: 1 atgagagcgaagtggaagaagaagcgcatgaggagattaaagaggaagcgtcgaaagatg 60 Query: 152 aggcagcgatccaagtag 169 || ||||||||||||||| Sbjct: 61 agacagcgatccaagtag 78
>gb|AY485230.1| Capsicum annuum unknown mRNA Length = 438 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 97 ggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgag 153 ||||||||||||||||||| | |||||||| || ||||||||||||||||||||||| Sbjct: 8 ggccaagtggaagaagaagcgtatgaggagactgaagaggaagcgccgaaagatgag 64
>gb|AC009894.2| Arabidopsis thaliana chromosome I BAC T6H22 genomic sequence, complete sequence Length = 96489 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | |||||||| | ||||||||||| ||||||||||| ||||||| Sbjct: 66574 agtggaagaagaagcgcatgaggagattaaagaggaagcgtcgaaagatgagacagcgat 66515 Query: 162 ccaagtag 169 |||||||| Sbjct: 66514 ccaagtag 66507
>emb|BX821687.1|CNS0AAB0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL65ZA07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 281 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | ||||||||||| ||||||||| | ||||||||||| ||||||| Sbjct: 79 agtggaagaagaagcgaatgaggaggctgaagaggaagagacgaaagatgagacagcgat 138 Query: 162 ccaagtag 169 | |||||| Sbjct: 139 ctaagtag 146
>gb|AC018721.1|AC018721 Arabidopsis thaliana chromosome II section 217 of 255 of the complete sequence. Sequence from clones F27I1, T7M7, T3G21 Length = 57991 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | ||||||||||| ||||||||| | ||||||||||| ||||||| Sbjct: 40200 agtggaagaagaagcgaatgaggaggctgaagaggaagagacgaaagatgagacagcgat 40141 Query: 162 ccaagtag 169 | |||||| Sbjct: 40140 ctaagtag 40133
>gb|AF085279.1|AF085279 Arabidopsis thaliana ABA-regulated gene cluster, complete sequence Length = 95713 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | ||||||||||| ||||||||| | ||||||||||| ||||||| Sbjct: 37460 agtggaagaagaagcgaatgaggaggctgaagaggaagagacgaaagatgagacagcgat 37401 Query: 162 ccaagtag 169 | |||||| Sbjct: 37400 ctaagtag 37393
>gb|AC149479.1| Populus trichocarpa clone Pop1-017N13, complete sequence Length = 129742 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | ||||||||| | |||||||||||| |||||||||| ||| ||| Sbjct: 46411 agtggaagaagaagcgtatgaggaggttgaagaggaagcgcagaaagatgagacagagat 46470 Query: 162 ccaagta 168 ||||||| Sbjct: 46471 ccaagta 46477
>gb|AC149428.1| Populus trichocarpa clone Pop1-080J15, complete sequence Length = 98246 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | ||||||||| | |||||||||||| |||||||||| ||| ||| Sbjct: 21789 agtggaagaagaagcgtatgaggaggttgaagaggaagcgcagaaagatgagacagagat 21848 Query: 162 ccaagta 168 ||||||| Sbjct: 21849 ccaagta 21855
>ref|NM_111687.1| Arabidopsis thaliana structural constituent of ribosome (AT3G08520) mRNA, complete cds Length = 78 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| |||||||||||||||||| | |||||||| | ||||||||| | ||||||||| Sbjct: 1 atgagagccaagtggaagaagaagcgtatgaggagattgaagaggaagagacgaaagatg 60 Query: 152 aggcagcgatccaagtag 169 || |||||||| |||||| Sbjct: 61 agacagcgatctaagtag 78
>ref|NM_111949.2| Arabidopsis thaliana structural constituent of ribosome (AT3G11120) mRNA, complete cds Length = 298 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 |||||||| ||||||||||||||| | |||||||| | ||||||||| | ||||||||| Sbjct: 77 atgagggctaagtggaagaagaagcgtatgaggagattaaagaggaagagacgaaagatg 136 Query: 152 aggcagcgatccaagtag 169 || |||||||| |||||| Sbjct: 137 agacagcgatctaagtag 154
>gb|AY098947.1| Arabidopsis thaliana AT3g08520/T8G24_5 mRNA, complete cds Length = 78 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| |||||||||||||||||| | |||||||| | ||||||||| | ||||||||| Sbjct: 1 atgagagccaagtggaagaagaagcgtatgaggagattgaagaggaagagacgaaagatg 60 Query: 152 aggcagcgatccaagtag 169 || |||||||| |||||| Sbjct: 61 agacagcgatctaagtag 78
>gb|AY058053.1| Arabidopsis thaliana AT3g08520/T8G24_5 mRNA, complete cds Length = 281 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| |||||||||||||||||| | |||||||| | ||||||||| | ||||||||| Sbjct: 48 atgagagccaagtggaagaagaagcgtatgaggagattgaagaggaagagacgaaagatg 107 Query: 152 aggcagcgatccaagtag 169 || |||||||| |||||| Sbjct: 108 agacagcgatctaagtag 125
>gb|DQ108904.1| Arabidopsis thaliana clone 9950 mRNA sequence Length = 344 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| |||||||||||||||||| | |||||||| | ||||||||| | ||||||||| Sbjct: 89 atgagagccaagtggaagaagaagcgtatgaggagattgaagaggaagagacgaaagatg 148 Query: 152 aggcagcgatccaagtag 169 || |||||||| |||||| Sbjct: 149 agacagcgatctaagtag 166
>gb|DQ108751.1| Arabidopsis thaliana clone 15866 mRNA sequence Length = 376 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| |||||||||||||||||| | |||||||| | ||||||||| | ||||||||| Sbjct: 99 atgagagccaagtggaagaagaagcgtatgaggagattgaagaggaagagacgaaagatg 158 Query: 152 aggcagcgatccaagtag 169 || |||||||| |||||| Sbjct: 159 agacagcgatctaagtag 176
>gb|BT005635.1| Arabidopsis thaliana clone U20128 putative ribosomal protein L41 (At3g11120) mRNA, complete cds Length = 109 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 |||||||| ||||||||||||||| | |||||||| | ||||||||| | ||||||||| Sbjct: 1 atgagggctaagtggaagaagaagcgtatgaggagattaaagaggaagagacgaaagatg 60 Query: 152 aggcagcgatccaagtag 169 || |||||||| |||||| Sbjct: 61 agacagcgatctaagtag 78
>gb|BT004288.1| Arabidopsis thaliana clone RAFL14-96-M10 (R20128) putative ribosomal protein L41 (At3g11120) mRNA, complete cds Length = 314 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 |||||||| ||||||||||||||| | |||||||| | ||||||||| | ||||||||| Sbjct: 77 atgagggctaagtggaagaagaagcgtatgaggagattaaagaggaagagacgaaagatg 136 Query: 152 aggcagcgatccaagtag 169 || |||||||| |||||| Sbjct: 137 agacagcgatctaagtag 154
>emb|BX825175.1|CNS0A58X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL18ZE10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 336 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| |||||||||||||||||| | |||||||| | ||||||||| | ||||||||| Sbjct: 66 atgagagccaagtggaagaagaagcgtatgaggagattgaagaggaagagacgaaagatg 125 Query: 152 aggcagcgatccaagtag 169 || |||||||| |||||| Sbjct: 126 agacagcgatctaagtag 143
>gb|AF047051.1|AF047051 Glycine max ribosomal protein L41 mRNA, partial cds Length = 297 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgatcca 164 |||||| |||| | ||||||||| | ||||||||||||||||||||||| ||| |||||| Sbjct: 14 ggaagacgaagcgtatgaggaggttgaagaggaagcgccgaaagatgagacagagatcca 73 Query: 165 agtag 169 ||||| Sbjct: 74 agtag 78
>gb|AC189368.1| Brassica rapa subsp. pekinensis clone KBrB047A09, complete sequence Length = 142540 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | ||||||||| | ||||||||| | ||||||||||| ||||||| Sbjct: 51304 agtggaagaagaagcgtatgaggaggttgaagaggaagagacgaaagatgagacagcgat 51363 Query: 162 ccaagtag 169 | |||||| Sbjct: 51364 ctaagtag 51371
>gb|AC144729.29| Medicago truncatula clone mth2-15j6, complete sequence Length = 113550 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | |||||||| | ||||||||||||||||||||||| ||| ||| Sbjct: 36186 agtggaagaagaagcgtatgaggagattgaagaggaagcgccgaaagatgagacagagat 36127 Query: 162 ccaagtag 169 | |||||| Sbjct: 36126 ctaagtag 36119
>gb|AC148528.15| Medicago truncatula clone mth2-53h4, complete sequence Length = 141776 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 98 gccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcag 157 |||||||||||||||||| ||||||||| | |||||||||| ||||||||||| || Sbjct: 44669 gccaagtggaagaagaagcatatgaggaggttgaagaggaagcaacgaaagatgagacat 44610 Query: 158 cgatccaagtag 169 |||||||||||| Sbjct: 44609 cgatccaagtag 44598
>gb|AC136449.21| Medicago truncatula clone mth2-11k13, complete sequence Length = 112369 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 98 gccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcag 157 |||||||||||||||||| ||||||||| | |||||||||| ||||||||||| || Sbjct: 101646 gccaagtggaagaagaagcatatgaggaggttgaagaggaagcaacgaaagatgagacat 101587 Query: 158 cgatccaagtag 169 |||||||||||| Sbjct: 101586 cgatccaagtag 101575
>dbj|AK229596.1| Arabidopsis thaliana mRNA for ribosomal protein GL41 - like, complete cds, clone: RAFL19-37-G18 Length = 289 Score = 69.9 bits (35), Expect = 7e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 91 gatgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagat 150 |||||| || ||||||||||||||| | |||||||| | ||||||||| | |||||||| Sbjct: 69 gatgagagctaagtggaagaagaagcgtatgaggagattgaagaggaagagacgaaagat 128 Query: 151 gaggcagcgatccaagtag 169 ||| |||||||| |||||| Sbjct: 129 gagacagcgatctaagtag 147
>ref|NM_115460.2| Arabidopsis thaliana structural constituent of ribosome (AT3G56020) mRNA, complete cds Length = 376 Score = 69.9 bits (35), Expect = 7e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 91 gatgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagat 150 |||||| || ||||||||||||||| | |||||||| | ||||||||| | |||||||| Sbjct: 42 gatgagagctaagtggaagaagaagcgtatgaggagattgaagaggaagagacgaaagat 101 Query: 151 gaggcagcgatccaagtag 169 ||| |||||||| |||||| Sbjct: 102 gagacagcgatctaagtag 120
>emb|BX817854.1|CNS0AE3D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL45ZB04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 803 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | ||||||||||| ||||||||| | ||||||||||| ||||| | Sbjct: 626 agtggaagaagaagcgtatgaggaggcttaagaggaagagacgaaagatgagacagcgtt 685 Query: 162 ccaagta 168 | ||||| Sbjct: 686 ctaagta 692
>emb|BX823019.1|CNS0A4UP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB81ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1497 Score = 69.9 bits (35), Expect = 7e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 91 gatgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagat 150 |||||| || ||||||||||||||| | |||||||| | ||||||||| | |||||||| Sbjct: 1287 gatgagagctaagtggaagaagaagcgtatgaggagattgaagaggaagagacgaaagat 1346 Query: 151 gaggcagcgatccaagtag 169 ||| |||||||| |||||| Sbjct: 1347 gagacagcgatctaagtag 1365
>gb|AC002986.1|YUP8H12R Arabidopsis thaliana chromosome 1 YAC YUP8H12R sequence, complete sequence Length = 181925 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | ||||||||||| ||||||||| | ||||||||||| ||||| | Sbjct: 112976 agtggaagaagaagcgtatgaggaggcttaagaggaagagacgaaagatgagacagcgtt 112917 Query: 162 ccaagta 168 | ||||| Sbjct: 112916 ctaagta 112910
>emb|BX842232.1|CNS09YBE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL89ZA05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 305 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| |||||||||||||||||| | || ||||| | ||||||||| | ||||||||| Sbjct: 72 atgagagccaagtggaagaagaagcgtattaggagattgaagaggaagagacgaaagatg 131 Query: 152 aggcagcgatccaagtag 169 || |||||||| |||||| Sbjct: 132 agacagcgatctaagtag 149
>gb|AC189431.1| Brassica rapa subsp. pekinensis clone KBrB068B07, complete sequence Length = 145502 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | |||||||| | ||||||||| | ||||||||||| ||||||| Sbjct: 92130 agtggaagaagaagcgtatgaggagattaaagaggaagagacgaaagatgagacagcgat 92189 Query: 162 ccaagtag 169 | |||||| Sbjct: 92190 ctaagtag 92197
>gb|AC187540.1| Lycopersicon esculentum cv. Heinz 1706, BAC clone SL_MboI0077G20, complete sequence Length = 91949 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | |||||||| || || ||||||||| |||||||||| ||| ||| Sbjct: 81014 agtggaagaagaagcgtatgaggagactgaaaaggaagcgcagaaagatgagacagagat 80955 Query: 162 ccaagtag 169 | |||||| Sbjct: 80954 ctaagtag 80947
>gb|AC187539.1| Solanum lycopersicum cv. Heinz 1706, chromosome 7 BAC clone C07HBa0179K09, complete sequence Length = 107788 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | |||||||| || || ||||||||| |||||||||| ||| ||| Sbjct: 2020 agtggaagaagaagcgtatgaggagactgaaaaggaagcgcagaaagatgagacagagat 1961 Query: 162 ccaagtag 169 | |||||| Sbjct: 1960 ctaagtag 1953
>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete sequence Length = 101284 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | |||||||| | ||||||||| | ||||||||||| ||||||| Sbjct: 34877 agtggaagaagaagcgtatgaggagattaaagaggaagagacgaaagatgagacagcgat 34818 Query: 162 ccaagtag 169 | |||||| Sbjct: 34817 ctaagtag 34810
>emb|CT025837.1| Medicago truncatula chromosome 5 clone mth2-28f11, COMPLETE SEQUENCE Length = 99258 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 98 gccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcag 157 |||||||||||||||||| ||||||| | | |||||||||| ||||||||||| || Sbjct: 42507 gccaagtggaagaagaagcatatgaggatgttgaagaggaagcaacgaaagatgagacat 42566 Query: 158 cgatccaagtag 169 |||||||||||| Sbjct: 42567 cgatccaagtag 42578
>emb|AL163832.1|ATF27K19 Arabidopsis thaliana DNA chromosome 3, BAC clone F27K19 Length = 95111 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | |||||||| | ||||||||| | ||||||||||| ||||||| Sbjct: 75809 agtggaagaagaagcgtatgaggagattgaagaggaagagacgaaagatgagacagcgat 75750 Query: 162 ccaagtag 169 | |||||| Sbjct: 75749 ctaagtag 75742
>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete sequence Length = 103517 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | |||||||| | ||||||||| | ||||||||||| ||||||| Sbjct: 18403 agtggaagaagaagcgtatgaggagattaaagaggaagagacgaaagatgagacagcgat 18462 Query: 162 ccaagtag 169 | |||||| Sbjct: 18463 ctaagtag 18470
>gb|AC074395.1|AC074395 Arabidopsis thaliana chromosome 3 BAC T8G24 genomic sequence, complete sequence Length = 29605 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatgaggcagcgat 161 |||||||||||||| | |||||||| | ||||||||| | ||||||||||| ||||||| Sbjct: 21625 agtggaagaagaagcgtatgaggagattgaagaggaagagacgaaagatgagacagcgat 21684 Query: 162 ccaagtag 169 | |||||| Sbjct: 21685 ctaagtag 21692
>gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07, complete sequence Length = 164898 Score = 54.0 bits (27), Expect = 4e-04 Identities = 49/55 (89%), Gaps = 1/55 (1%) Strand = Plus / Minus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgcc-gaaagatgaggc 155 |||||||||||||| | ||||||||||| ||||||||| ||| ||||||||||| Sbjct: 69091 agtggaagaagaagcgcatgaggaggctgaagaggaagagccaaaaagatgaggc 69037
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 54.0 bits (27), Expect = 4e-04 Identities = 49/55 (89%), Gaps = 1/55 (1%) Strand = Plus / Minus Query: 102 agtggaagaagaagaggatgaggaggctcaagaggaagcgcc-gaaagatgaggc 155 |||||||||||||| | ||||||||||| ||||||||| ||| ||||||||||| Sbjct: 2874480 agtggaagaagaagcgcatgaggaggctgaagaggaagagccaaaaagatgaggc 2874426
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 101 aagtggaagaagaagaggatgaggaggctcaagaggaagcgc 142 ||||||| ||||||||||| ||||||||||||||| ||||| Sbjct: 1732428 aagtggatcaagaagaggattaggaggctcaagaggcagcgc 1732387
>ref|XM_701303.1| PREDICTED: Danio rerio similar to TRDN protein (LOC566906), mRNA Length = 1206 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggctcaagagga 137 ||||||||||||||||||||||| | ||||||| Sbjct: 255 ggaagaagaagaggatgaggaggatgaagagga 287
>gb|BC083371.1| Danio rerio TRDN protein, mRNA (cDNA clone IMAGE:7233348), partial cds Length = 1868 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggctcaagagga 137 ||||||||||||||||||||||| | ||||||| Sbjct: 935 ggaagaagaagaggatgaggaggatgaagagga 967
>gb|BC109460.1| Danio rerio TRDN protein, mRNA (cDNA clone IMAGE:7234586), partial cds Length = 1402 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggctcaagagga 137 ||||||||||||||||||||||| | ||||||| Sbjct: 946 ggaagaagaagaggatgaggaggatgaagagga 978
>ref|NM_001071009.1| Oryza sativa (japonica cultivar-group) Os10g0377000 (Os10g0377000) mRNA, partial cds Length = 973 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 32 cacctccgccgccgtctccgccgc 55 |||||||||||||||||||||||| Sbjct: 421 cacctccgccgccgtctccgccgc 398
>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0095C06, from Chromosome 10, complete sequence Length = 156159 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 32 cacctccgccgccgtctccgccgc 55 |||||||||||||||||||||||| Sbjct: 91012 cacctccgccgccgtctccgccgc 90989
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 32 cacctccgccgccgtctccgccgc 55 |||||||||||||||||||||||| Sbjct: 11507019 cacctccgccgccgtctccgccgc 11506996 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 ctccgccgccgtctccgccgctgc 58 ||||||||||||| |||||||||| Sbjct: 12333521 ctccgccgccgtcgccgccgctgc 12333544
>dbj|AK111349.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-G05, full insert sequence Length = 973 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 32 cacctccgccgccgtctccgccgc 55 |||||||||||||||||||||||| Sbjct: 421 cacctccgccgccgtctccgccgc 398
>ref|XM_001185182.1| PREDICTED: Strongylocentrotus purpuratus similar to NPHP1 protein (LOC576932), mRNA Length = 1869 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggctcaagaggaag 139 |||||||||||||||||| |||| | ||||||||| Sbjct: 123 ggaagaagaagaggatgaagaggatgaagaggaag 157
>ref|XM_777195.2| PREDICTED: Strongylocentrotus purpuratus similar to NPHP1 protein (LOC576932), mRNA Length = 1869 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggctcaagaggaag 139 |||||||||||||||||| |||| | ||||||||| Sbjct: 123 ggaagaagaagaggatgaagaggatgaagaggaag 157
>ref|XM_001066848.1| PREDICTED: Rattus norvegicus similar to hypothetical protein FLJ39827 (predicted) (RGD1560322_predicted), mRNA Length = 3596 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggagg 127 ||||||||||||||||||||||| Sbjct: 1403 ggaagaagaagaggatgaggagg 1425
>ref|XM_576986.2| PREDICTED: Rattus norvegicus similar to hypothetical protein FLJ39827 (predicted) (RGD1560322_predicted), mRNA Length = 3596 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggagg 127 ||||||||||||||||||||||| Sbjct: 1403 ggaagaagaagaggatgaggagg 1425
>ref|XR_007502.1| PREDICTED: Rattus norvegicus similar to High mobility group protein 1 (HMG-1) (predicted) (RGD1564581_predicted), mRNA Length = 1216 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggctcaagaggaag 139 |||||| ||||| |||||||||||| ||||||||| Sbjct: 650 ggaagaggaagatgatgaggaggctgaagaggaag 684
>ref|XM_001113102.1| PREDICTED: Macaca mulatta similar to DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1, transcript variant 1 (LOC711178), mRNA Length = 3755 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggagg 127 ||||||||||||||||||||||| Sbjct: 658 ggaagaagaagaggatgaggagg 680
>ref|XM_001113171.1| PREDICTED: Macaca mulatta similar to DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1, transcript variant 2 (LOC711178), mRNA Length = 3861 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggagg 127 ||||||||||||||||||||||| Sbjct: 764 ggaagaagaagaggatgaggagg 786
>ref|XM_001113204.1| PREDICTED: Macaca mulatta similar to DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1, transcript variant 3 (LOC711178), mRNA Length = 3862 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggagg 127 ||||||||||||||||||||||| Sbjct: 765 ggaagaagaagaggatgaggagg 787
>ref|XM_001113231.1| PREDICTED: Macaca mulatta similar to DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1, transcript variant 4 (LOC711178), mRNA Length = 3796 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggagg 127 ||||||||||||||||||||||| Sbjct: 699 ggaagaagaagaggatgaggagg 721
>emb|CT030035.11| Mouse DNA sequence from clone RP24-192J9 on chromosome 13, complete sequence Length = 183134 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 105 ggaagaagaagaggatgaggagg 127 ||||||||||||||||||||||| Sbjct: 34132 ggaagaagaagaggatgaggagg 34110 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 105 ggaagaagaagaggatgaggagg 127 ||||||||||||||||||||||| Sbjct: 34189 ggaagaagaagaggatgaggagg 34167
>ref|NM_111556.2| Arabidopsis thaliana unknown protein (AT3G06760) mRNA, complete cds Length = 855 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 104 tggaagaagaagaggatgaggag 126 ||||||||||||||||||||||| Sbjct: 58 tggaagaagaagaggatgaggag 36
>gb|AC134335.2| Mus musculus BAC clone RP24-150I18 from chromosome 15, complete sequence Length = 166926 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 105 ggaagaagaagaggatgaggagg 127 ||||||||||||||||||||||| Sbjct: 84263 ggaagaagaagaggatgaggagg 84241
>gb|AC122483.5| Mus musculus BAC clone RP24-366B4 from chromosome 6, complete sequence Length = 185388 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 105 ggaagaagaagaggatgaggagg 127 ||||||||||||||||||||||| Sbjct: 153988 ggaagaagaagaggatgaggagg 153966
>gb|AC124581.4| Mus musculus BAC clone RP23-116E3 from chromosome 13, complete sequence Length = 205173 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 105 ggaagaagaagaggatgaggagg 127 ||||||||||||||||||||||| Sbjct: 189678 ggaagaagaagaggatgaggagg 189656 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 105 ggaagaagaagaggatgaggagg 127 ||||||||||||||||||||||| Sbjct: 189735 ggaagaagaagaggatgaggagg 189713
>gb|AC023912.5|ATAC023912 Arabidopsis thaliana chromosome III BAC F3E22 genomic sequence, complete sequence Length = 63767 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 104 tggaagaagaagaggatgaggag 126 ||||||||||||||||||||||| Sbjct: 33410 tggaagaagaagaggatgaggag 33432
>gb|AC164104.5| Mus musculus BAC clone RP23-428G7 from chromosome 6, complete sequence Length = 199234 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggagg 127 ||||||||||||||||||||||| Sbjct: 22096 ggaagaagaagaggatgaggagg 22118
>gb|AY133641.1| Arabidopsis thaliana AT3g06760/F3E22_10 mRNA, complete cds Length = 675 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 104 tggaagaagaagaggatgaggag 126 ||||||||||||||||||||||| Sbjct: 58 tggaagaagaagaggatgaggag 36
>gb|AY074585.1| Arabidopsis thaliana AT3g06760/F3E22_10 mRNA, complete cds Length = 976 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 104 tggaagaagaagaggatgaggag 126 ||||||||||||||||||||||| Sbjct: 158 tggaagaagaagaggatgaggag 136
>emb|AJ248287.2|CNSPAX05 Pyrococcus abyssi complete genome; segment 5/6 Length = 305600 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 101 aagtggaagaagaagaggatgaggaggctcaagag 135 ||||||| ||||||||||| |||||||||||||| Sbjct: 161314 aagtggattaagaagaggataaggaggctcaagag 161348
>ref|XM_951832.1| Neurospora crassa OR74A hypothetical protein (NCU04514.1) partial mRNA Length = 4140 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggagg 127 ||||||||||||||||||||||| Sbjct: 2604 ggaagaagaagaggatgaggagg 2626
>emb|BX824126.1|CNS0A4SP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH24ZD12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1435 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 104 tggaagaagaagaggatgaggag 126 ||||||||||||||||||||||| Sbjct: 146 tggaagaagaagaggatgaggag 124
>emb|AL844164.17| Mouse DNA sequence from clone RP23-300I3 on chromosome 4, complete sequence Length = 209214 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 105 ggaagaagaagaggatgaggagg 127 ||||||||||||||||||||||| Sbjct: 91912 ggaagaagaagaggatgaggagg 91890
>gb|AC157946.2| Mus musculus BAC clone RP23-281H11 from chromosome 15, complete sequence Length = 190752 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 105 ggaagaagaagaggatgaggagg 127 ||||||||||||||||||||||| Sbjct: 149768 ggaagaagaagaggatgaggagg 149746
>emb|AL807400.9| Mouse DNA sequence from clone RP23-196A4 on chromosome 2, complete sequence Length = 220579 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggagg 127 ||||||||||||||||||||||| Sbjct: 214910 ggaagaagaagaggatgaggagg 214932
>ref|NM_008665.3| Mus musculus myelin transcription factor 1 (Myt1), mRNA Length = 5509 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 1206 gaagaagaagaggatgaggagg 1227
>gb|AC190173.1| Mus musculus chromosome 14 clone RP24-80K11, complete sequence Length = 215483 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 47081 gaagaagaagaggatgaggagg 47060
>dbj|AK228925.1| Arabidopsis thaliana mRNA for ABC transporter-like protein, complete cds, clone: RAFL16-23-O15 Length = 3786 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 218 gaagaagaagaggatgaggagg 197
>gb|AC188089.1| Mus musculus chromosome 14 clone RP23-274E2, complete sequence Length = 212870 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 50139 gaagaagaagaggatgaggagg 50118
>ref|XR_008551.1| PREDICTED: Rattus norvegicus hypothetical protein LOC684021 (LOC684021), mRNA Length = 435 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 387 gaagaagaagaggatgaggagg 408
>ref|NM_116135.2| Arabidopsis thaliana ATMRP10 (ATMRP10) mRNA, complete cds Length = 4816 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 218 gaagaagaagaggatgaggagg 197
>gb|AY421967.1| Cryptococcus gattii strain ATCC 32609 MAT-alpha mating locus, fragment IV Length = 34039 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 105 ggaagaagaagaggatgaggag 126 |||||||||||||||||||||| Sbjct: 21438 ggaagaagaagaggatgaggag 21417
>gb|AY710430.1| Cryptococcus gattii strain WM276 MATalpha locus, complete sequence Length = 132746 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 105 ggaagaagaagaggatgaggag 126 |||||||||||||||||||||| Sbjct: 71461 ggaagaagaagaggatgaggag 71440
>gb|AC158358.5| Mus musculus BAC clone RP23-429K3 from chromosome 14, complete sequence Length = 198706 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 50392 gaagaagaagaggatgaggagg 50413
>gb|BC063252.1| Mus musculus myelin transcription factor 1, mRNA (cDNA clone MGC:66675 IMAGE:6406740), complete cds Length = 5324 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 995 gaagaagaagaggatgaggagg 1016
>gb|AC125198.4| Mus musculus BAC clone RP23-254B9 from 14, complete sequence Length = 205392 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 190769 gaagaagaagaggatgaggagg 190748
>ref|NM_131412.1| Danio rerio myelocytomatosis oncogene a (myca), mRNA gb|BC053281.1| Danio rerio myelocytomatosis oncogene a, mRNA (cDNA clone MGC:64149 IMAGE:6797033), complete cds Length = 1869 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 839 gaagaagaagaggatgaggagg 860
>gb|AF016653.2| Caenorhabditis elegans cosmid C41D7, complete sequence Length = 12203 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 104 tggaagaagaagaggatgagga 125 |||||||||||||||||||||| Sbjct: 8756 tggaagaagaagaggatgagga 8735
>gb|AC111111.11| Mus musculus chromosome 3, clone RP23-201A9, complete sequence Length = 233326 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 105 ggaagaagaagaggatgaggag 126 |||||||||||||||||||||| Sbjct: 144136 ggaagaagaagaggatgaggag 144115
>gb|AC120797.9| Mus musculus chromosome 18, clone RP24-81D18, complete sequence Length = 210631 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 125227 gaagaagaagaggatgaggagg 125206
>ref|XM_627133.1| Cryptosporidium parvum Iowa II brahma like protein (cgd8_2300), partial mRNA Length = 5022 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 1801 gaagaagaagaggatgaggagg 1822
>ref|NM_061317.2| Caenorhabditis elegans PaTched Related family member (ptr-3) (ptr-3) mRNA, complete cds Length = 2874 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 104 tggaagaagaagaggatgagga 125 |||||||||||||||||||||| Sbjct: 1856 tggaagaagaagaggatgagga 1877
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 cctccgccgccgtctccgccgc 55 |||||||||||||||||||||| Sbjct: 21357603 cctccgccgccgtctccgccgc 21357624 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 cctccgccgccgtctccgcc 53 |||||||||||||||||||| Sbjct: 5411510 cctccgccgccgtctccgcc 5411529
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cctccgccgccgtctccgccgc 55 |||||||||||||||||||||| Sbjct: 26521086 cctccgccgccgtctccgccgc 26521065 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 tggaagaagaagaggatgaggagg 127 |||||||||||||||| ||||||| Sbjct: 209090 tggaagaagaagaggaggaggagg 209067
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 532313 gaagaagaagaggatgaggagg 532292
>ref|XM_685097.1| PREDICTED: Danio rerio similar to Extracellular matrix protein 2 precursor (Matrix glycoprotein SC1/ECM2) (LOC561688), mRNA Length = 1395 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 142 gaagaagaagaggatgaggagg 163
>dbj|AB093267.2| Mus musculus mRNA for mKIAA0835 protein Length = 5119 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 926 gaagaagaagaggatgaggagg 947
>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9 Length = 110257 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 48520 gaagaagaagaggatgaggagg 48541
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 172514 gaagaagaagaggatgaggagg 172493
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 6918 gaagaagaagaggatgaggagg 6897
>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0460H04 Length = 166490 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cctccgccgccgtctccgccgc 55 |||||||||||||||||||||| Sbjct: 54739 cctccgccgccgtctccgccgc 54718
>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0709F06 Length = 170964 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cctccgccgccgtctccgccgc 55 |||||||||||||||||||||| Sbjct: 133125 cctccgccgccgtctccgccgc 133104
>ref|NM_204425.1| Gallus gallus cysteine rich transmembrane BMP regulator 1 (chordin-like) (CRIM1), mRNA gb|AY098584.1| Gallus gallus cysteine-rich motorneuron 1 (Crim1) mRNA, complete cds Length = 4010 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 cacctccgccgccgtctccgcc 53 |||||||||||||||||||||| Sbjct: 427 cacctccgccgccgtctccgcc 406
>emb|AL953864.6| Zebrafish DNA sequence from clone DKEY-32E6 in linkage group 23, complete sequence Length = 249608 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 179783 gaagaagaagaggatgaggagg 179804
>dbj|AB082378.1| Mus musculus mRNA for neural zinc finger protein NZF-2b, complete cds Length = 5510 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 1206 gaagaagaagaggatgaggagg 1227
>ref|NM_001016811.1| Xenopus tropicalis hypothetical protein LOC549565 (LOC549565), mRNA emb|CR855567.1| Xenopus tropicalis finished cDNA, clone TEgg035b09 Length = 2797 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 1415 gaagaagaagaggatgaggagg 1436
>gb|AF004294.1|AF004294 Mus musculus myelin transcription factor 1 mRNA, complete cds Length = 5466 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 1186 gaagaagaagaggatgaggagg 1207
>gb|AC140323.3| Mus musculus BAC clone RP24-325G15 from 3, complete sequence Length = 182942 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 120524 gaagaagaagaggatgaggagg 120503
>emb|AL713937.3|CNS07YPI Oryza sativa chromosome 12, . BAC OJ1103_B10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 95132 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cctccgccgccgtctccgccgc 55 |||||||||||||||||||||| Sbjct: 3675 cctccgccgccgtctccgccgc 3654
>gb|DQ096809.1| Cryptococcus gattii strain R265 mating type alpha locus, complete sequence Length = 120440 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 105 ggaagaagaagaggatgaggag 126 |||||||||||||||||||||| Sbjct: 59252 ggaagaagaagaggatgaggag 59231
>emb|AL845173.4| Mouse DNA sequence from clone RP23-322G1 on chromosome 2, complete sequence Length = 194770 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 106102 gaagaagaagaggatgaggagg 106123
>gb|AC168071.4| Mus musculus BAC clone RP23-97D14 from chromosome 14, complete sequence Length = 270731 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 50396 gaagaagaagaggatgaggagg 50417
>gb|M80574.1|CHKHMGB Gallus domesticus high-mobility group-2 protein (HMG-2) mRNA, complete cds Length = 995 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggag 126 |||||||||||||||||||||| Sbjct: 699 ggaagaagaagaggatgaggag 720
>ref|NM_205486.1| Gallus gallus non-histone chromosomal protein (HMG2), mRNA gb|M83235.1|CHKHMG2A Gallus gallus non-histone chromosomal protein (HMG2) mRNA, complete cds Length = 1083 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggag 126 |||||||||||||||||||||| Sbjct: 682 ggaagaagaagaggatgaggag 703
>gb|L11710.1|ZEFZCMYC Brachydanio rerio c-myc oncoprotein mRNA, complete cds Length = 1639 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 628 gaagaagaagaggatgaggagg 649
>emb|AL645857.11| Mouse DNA sequence from clone RP23-167N2 on chromosome X, complete sequence Length = 137904 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggagg 127 |||||||||||||||||||||| Sbjct: 58626 gaagaagaagaggatgaggagg 58647
>emb|CR855103.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0718E12, complete sequence Length = 90431 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ctccgccgccgtctccgccgc 55 ||||||||||||||||||||| Sbjct: 18678 ctccgccgccgtctccgccgc 18658
>ref|NM_001059184.1| Oryza sativa (japonica cultivar-group) Os04g0393500 (Os04g0393500) mRNA, complete cds Length = 477 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ctccgccgccgtctccgccgc 55 ||||||||||||||||||||| Sbjct: 159 ctccgccgccgtctccgccgc 139
>ref|XM_001148634.1| PREDICTED: Pan troglodytes hypothetical protein LOC739379, transcript variant 1 (LOC739379), mRNA Length = 2065 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggct 129 ||||||||| ||||||||||||||| Sbjct: 1052 ggaagaagaggaggatgaggaggct 1076
>ref|XM_001148988.1| PREDICTED: Pan troglodytes hypothetical protein LOC739379, transcript variant 6 (LOC739379), mRNA Length = 1985 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggct 129 ||||||||| ||||||||||||||| Sbjct: 852 ggaagaagaggaggatgaggaggct 876
>ref|XM_001148920.1| PREDICTED: Pan troglodytes hypothetical protein LOC739379, transcript variant 5 (LOC739379), mRNA Length = 1929 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggct 129 ||||||||| ||||||||||||||| Sbjct: 796 ggaagaagaggaggatgaggaggct 820
>ref|XM_001148843.1| PREDICTED: Pan troglodytes hypothetical protein LOC739379, transcript variant 4 (LOC739379), mRNA Length = 1976 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggct 129 ||||||||| ||||||||||||||| Sbjct: 843 ggaagaagaggaggatgaggaggct 867
>ref|XM_001148767.1| PREDICTED: Pan troglodytes hypothetical protein LOC739379, transcript variant 3 (LOC739379), mRNA Length = 1899 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggct 129 ||||||||| ||||||||||||||| Sbjct: 766 ggaagaagaggaggatgaggaggct 790
>ref|XM_001148707.1| PREDICTED: Pan troglodytes hypothetical protein LOC739379, transcript variant 2 (LOC739379), mRNA Length = 1793 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggct 129 ||||||||| ||||||||||||||| Sbjct: 660 ggaagaagaggaggatgaggaggct 684
>ref|XM_936372.2| PREDICTED: Homo sapiens lemur tyrosine kinase 3 (LMTK3), mRNA Length = 4972 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 gtggaagaagaagaggatgaggagg 127 ||||||||||||||||| ||||||| Sbjct: 1999 gtggaagaagaagaggaggaggagg 2023
>ref|XM_055866.8| PREDICTED: Homo sapiens lemur tyrosine kinase 3 (LMTK3), mRNA Length = 4972 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 gtggaagaagaagaggatgaggagg 127 ||||||||||||||||| ||||||| Sbjct: 1999 gtggaagaagaagaggaggaggagg 2023
>gb|AC189510.1| Brassica rapa subsp. pekinensis clone KBrB089D07, complete sequence Length = 135640 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aagaagaagaggatgaggagg 127 ||||||||||||||||||||| Sbjct: 79116 aagaagaagaggatgaggagg 79096
>ref|XM_223992.4| PREDICTED: Rattus norvegicus sal-like 2 (Drosophila) (predicted) (Sall2_predicted), mRNA Length = 5090 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgagga 125 ||||||||||||||||||||| Sbjct: 2790 ggaagaagaagaggatgagga 2810
>ref|XR_008750.1| PREDICTED: Rattus norvegicus similar to Hmgb1 protein (predicted) (RGD1566334_predicted), mRNA Length = 958 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggctcaagagga 137 |||||| |||||||||||||||| | ||||||| Sbjct: 574 ggaagaggaagaggatgaggaggatgaagagga 606
>ref|XR_012048.1| PREDICTED: Macaca mulatta similar to Protein ariadne-2 homolog (ARI-2) (Triad1 protein) (ARIH2), mRNA Length = 1950 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 aagtggaagaagaagaggatg 121 ||||||||||||||||||||| Sbjct: 224 aagtggaagaagaagaggatg 244
>emb|CT985158.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 777 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 ggaagaagaagaggatgagga 125 ||||||||||||||||||||| Sbjct: 674 ggaagaagaagaggatgagga 654
>gb|AC164647.3| Mus musculus BAC clone RP23-463P13 from chromosome 16, complete sequence Length = 181953 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 gaaagatgaggcagcgatccaagta 168 |||||||||||||| |||||||||| Sbjct: 108096 gaaagatgaggcagagatccaagta 108072
>gb|AC119220.11| Mus musculus chromosome 1, clone RP24-201K16, complete sequence Length = 162827 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgagga 125 ||||||||||||||||||||| Sbjct: 150531 ggaagaagaagaggatgagga 150551
>gb|BC106406.1| Xenopus laevis hypothetical protein MGC131044, mRNA (cDNA clone MGC:131044 IMAGE:7980831), complete cds Length = 1633 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgagga 125 ||||||||||||||||||||| Sbjct: 1222 ggaagaagaagaggatgagga 1242
>gb|BC014978.1| Homo sapiens zinc finger and BTB domain containing 9, mRNA (cDNA clone MGC:23166 IMAGE:4874020), complete cds Length = 2717 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 gtggaagaagaagaggatgaggagg 127 ||||||||||||||||| ||||||| Sbjct: 886 gtggaagaagaagaggaggaggagg 910
>ref|XM_874346.1| PREDICTED: Bos taurus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30), transcript variant 2 (LOC614126), mRNA Length = 1145 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 gtggaagaagaagaggatgaggagg 127 |||||||| |||||||||||||||| Sbjct: 591 gtggaagatgaagaggatgaggagg 615
>ref|XM_864795.1| PREDICTED: Bos taurus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30), transcript variant 1 (LOC614126), mRNA Length = 932 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 gtggaagaagaagaggatgaggagg 127 |||||||| |||||||||||||||| Sbjct: 591 gtggaagatgaagaggatgaggagg 615
>gb|AC116798.11| Mus musculus chromosome 1, clone RP24-329K22, complete sequence Length = 173479 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 ggaagaagaagaggatgagga 125 ||||||||||||||||||||| Sbjct: 163269 ggaagaagaagaggatgagga 163249
>gb|AC131725.2| Mus musculus BAC clone RP23-129H16 from chromosome 5, complete sequence Length = 203437 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggctcaagagga 137 ||||||||||||||| ||||||| |||||||| Sbjct: 184652 ggaagaagaagaggaagaggaggagcaagagga 184684
>ref|XM_707902.1| Candida albicans SC5314 putative oxysterol-binding protein (CaO19.8897), mRNA Length = 2535 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggag 126 ||||||||||||||||||||| Sbjct: 1234 gaagaagaagaggatgaggag 1254
>ref|XM_704865.1| Candida albicans SC5314 putative oxysterol-binding protein (CaO19.1317), mRNA Length = 2535 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggag 126 ||||||||||||||||||||| Sbjct: 1234 gaagaagaagaggatgaggag 1254
>ref|NM_152735.3| Homo sapiens zinc finger and BTB domain containing 9 (ZBTB9), mRNA Length = 2730 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 gtggaagaagaagaggatgaggagg 127 ||||||||||||||||| ||||||| Sbjct: 899 gtggaagaagaagaggaggaggagg 923
>gb|AC144797.2| Mus musculus BAC clone RP24-349B2 from chromosome 16, complete sequence Length = 129045 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 gaaagatgaggcagcgatccaagta 168 |||||||||||||| |||||||||| Sbjct: 110562 gaaagatgaggcagagatccaagta 110586
>gb|AC164634.3| Mus musculus BAC clone RP23-64E16 from chromosome 17, complete sequence Length = 204253 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 gtggaagaagaagaggatgaggagg 127 ||||||||||||||||| ||||||| Sbjct: 95704 gtggaagaagaagaggaggaggagg 95728
>gb|AC124374.5| Mus musculus BAC clone RP24-567K8 from chromosome 5, complete sequence Length = 181395 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 105 ggaagaagaagaggatgaggaggctcaagagga 137 ||||||||||||||| ||||||| |||||||| Sbjct: 2593 ggaagaagaagaggaagaggaggagcaagagga 2561
>gb|BC048321.1| Homo sapiens zinc finger and BTB domain containing 9, mRNA (cDNA clone IMAGE:4450342), with apparent retained intron Length = 2316 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 gtggaagaagaagaggatgaggagg 127 ||||||||||||||||| ||||||| Sbjct: 483 gtggaagaagaagaggaggaggagg 507
>gb|AC122420.4| Mus musculus BAC clone RP24-167C5 from chromosome 8, complete sequence Length = 179058 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 gtggaagaagaagaggatgaggagg 127 ||||||||||||||||| ||||||| Sbjct: 43586 gtggaagaagaagaggaggaggagg 43610
>gb|AC122384.3| Mus musculus BAC clone RP24-63P8 from chromosome 17, complete sequence Length = 190880 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 103 gtggaagaagaagaggatgaggagg 127 ||||||||||||||||| ||||||| Sbjct: 166882 gtggaagaagaagaggaggaggagg 166858
>dbj|AK122644.1| Homo sapiens cDNA FLJ16072 fis, clone IMR321000253, weakly similar to ZINC FINGER PROTEIN 151 Length = 2709 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 gtggaagaagaagaggatgaggagg 127 ||||||||||||||||| ||||||| Sbjct: 899 gtggaagaagaagaggaggaggagg 923
>ref|XM_817952.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.6k15.2410) partial mRNA Length = 825 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aagaagaagaggatgaggagg 127 ||||||||||||||||||||| Sbjct: 335 aagaagaagaggatgaggagg 355
>ref|NM_018022.1| Homo sapiens transmembrane protein 51 (TMEM51), mRNA dbj|AK001061.1| Homo sapiens cDNA FLJ10199 fis, clone HEMBA1004850 Length = 1809 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggct 129 ||||||||| ||||||||||||||| Sbjct: 766 ggaagaagaggaggatgaggaggct 790
>ref|XM_384496.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04320.1) partial mRNA Length = 1821 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgagga 125 ||||||||||||||||||||| Sbjct: 1251 ggaagaagaagaggatgagga 1271
>gb|BC000593.2| Homo sapiens transmembrane protein 51, mRNA (cDNA clone MGC:3086 IMAGE:3347548), complete cds Length = 1842 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggct 129 ||||||||| ||||||||||||||| Sbjct: 761 ggaagaagaggaggatgaggaggct 785
>gb|AC161570.6| Mus musculus chromosome 5, clone RP23-36O9, complete sequence Length = 228402 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggctcaagagga 137 ||||||||||||||| ||||||| |||||||| Sbjct: 129082 ggaagaagaagaggaagaggaggagcaagagga 129114
>ref|XM_460501.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F03498g) partial mRNA Length = 2388 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aagaagaagaggatgaggagg 127 ||||||||||||||||||||| Sbjct: 1415 aagaagaagaggatgaggagg 1435
>ref|XM_458098.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C10538g) partial mRNA Length = 1218 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggaggctcaaga 134 |||||||||||||||||||| ||| |||| Sbjct: 214 gaagaagaagaggatgaggaagctgaaga 242
>ref|XM_626005.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd5_450), partial mRNA Length = 990 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 ggaagaagaagaggatgagga 125 ||||||||||||||||||||| Sbjct: 297 ggaagaagaagaggatgagga 277
>gb|AC022780.19| Mus musculus chromosome 11, clone RP23-179C3, complete sequence Length = 237498 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 gtggaagaagaagaggatgaggagg 127 ||||||||||||||||| ||||||| Sbjct: 96150 gtggaagaagaagaggaagaggagg 96174
>dbj|AK013324.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810451C11 product:ribosomal protein L41, full insert sequence Length = 387 Score = 42.1 bits (21), Expect = 1.6 Identities = 63/77 (81%) Strand = Plus / Plus Query: 92 atgagggccaagtggaagaagaagaggatgaggaggctcaagaggaagcgccgaaagatg 151 ||||| || |||||| ||||||||||||| | ||||| ||| | ||| | |||||||| Sbjct: 47 atgagagcgaagtggcggaagaagaggatgcgcaggctgaagcgcaagagaagaaagatg 106 Query: 152 aggcagcgatccaagta 168 |||||| | |||||||| Sbjct: 107 aggcagaggtccaagta 123
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ctccgccgccgtctccgccgc 55 ||||||||||||||||||||| Sbjct: 19367346 ctccgccgccgtctccgccgc 19367326
>emb|BX088650.9| Human DNA sequence from clone DASS-97D12 on chromosome 6, complete sequence Length = 92518 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 gtggaagaagaagaggatgaggagg 127 ||||||||||||||||| ||||||| Sbjct: 67703 gtggaagaagaagaggaggaggagg 67727
>emb|BX284929.4| Human DNA sequence from clone RP11-681N21 on chromosome 1 Contains the 5' end of a novel gene, complete sequence Length = 148501 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 107 aagaagaagaggatgaggaggctcaagaggaag 139 ||||||||||||| ||||||| |||||||||| Sbjct: 43209 aagaagaagaggaggaggaggaacaagaggaag 43177
>emb|AL662799.16| Human DNA sequence from clone XXbac-294E21 on chromosome 6 contains the gene for a novel protein similar to lysophospholipase II (LYPLA2), the KNSL2 gene for kinesin-like 2, the PHF1 gene for PHD finger protein 1, the gene for divalent cation tolerant protein CUTA, the SYNGAP1 gene for synaptic Ras GTPase activating protein 1 homolog and five CpG islands, complete sequence Length = 136021 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 gtggaagaagaagaggatgaggagg 127 ||||||||||||||||| ||||||| Sbjct: 108100 gtggaagaagaagaggaggaggagg 108124
>emb|AL391094.12| Human DNA sequence from clone RP5-903E17 on chromosome 1 Contains the 3' end of a novel gene (FLJ10199) and the 5' end of the gene for a novel protein (FLJ25234), complete sequence Length = 45670 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggct 129 ||||||||| ||||||||||||||| Sbjct: 11763 ggaagaagaggaggatgaggaggct 11787
>emb|AL161903.19| Human DNA sequence from clone RP11-175A4 on chromosome 6 Contains the 3' end of the SYNGAP1 gene for synaptic Ras GTPase activating protein 1 homolog (rat), complete sequence Length = 47104 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 gtggaagaagaagaggatgaggagg 127 ||||||||||||||||| ||||||| Sbjct: 10201 gtggaagaagaagaggaggaggagg 10225
>gb|S65292.1|S65279S08 drebrin {clone eDcg5} [chickens, Genomic, 741 nt, segment 8 of 10] Length = 741 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 gtggaagaagaagaggatgaggagg 127 ||||||||||||||||| ||||||| Sbjct: 571 gtggaagaagaagaggaggaggagg 595
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 aagaagaagaggatgaggagg 127 ||||||||||||||||||||| Sbjct: 280491 aagaagaagaggatgaggagg 280471
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggaggctcaaga 134 |||||||||||||||||||| ||| |||| Sbjct: 875608 gaagaagaagaggatgaggaagctgaaga 875636 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 aagaagaagaggatgaggag 126 |||||||||||||||||||| Sbjct: 414470 aagaagaagaggatgaggag 414451
>gb|BC000202.1| Homo sapiens transmembrane protein 51, mRNA (cDNA clone MGC:3114 IMAGE:3351196), complete cds Length = 1575 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggct 129 ||||||||| ||||||||||||||| Sbjct: 413 ggaagaagaggaggatgaggaggct 437
>gb|BC005177.2| Homo sapiens transmembrane protein 51, mRNA (cDNA clone MGC:990 IMAGE:3507275), complete cds Length = 1862 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggct 129 ||||||||| ||||||||||||||| Sbjct: 800 ggaagaagaggaggatgaggaggct 824
>emb|AL607072.15| Mouse DNA sequence from clone RP23-81E16 on chromosome 11 Contains the 3' end of the Ssh2 gene for slingshot homolog 2 (Drosophila), the Coro6 gene for coronin actin binding protein 6, a novel gene, the Git1 gene for G protein-coupled receptor kinase-interactor 1 and the 3' end of a novel gene, complete sequence Length = 90029 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 103 gtggaagaagaagaggatgaggagg 127 ||||||||||||||||| ||||||| Sbjct: 14533 gtggaagaagaagaggaagaggagg 14509
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ctccgccgccgtctccgccgc 55 ||||||||||||||||||||| Sbjct: 18598 ctccgccgccgtctccgccgc 18578
>gb|AC159747.8| Mus musculus 10 BAC RP23-416G20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194198 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 gtggaagaagaagaggatgaggagg 127 ||||||||||||||||| ||||||| Sbjct: 79310 gtggaagaagaagaggaagaggagg 79334
>emb|BX855588.6| Zebrafish DNA sequence from clone CH211-276E22 in linkage group 4, complete sequence Length = 72765 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 gaagaagaagaggatgaggag 126 ||||||||||||||||||||| Sbjct: 21076 gaagaagaagaggatgaggag 21056
>gb|AC092834.3| Homo sapiens BAC clone RP13-497K6 from 4, complete sequence Length = 146708 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aagaagaagaggatgaggagg 127 ||||||||||||||||||||| Sbjct: 118449 aagaagaagaggatgaggagg 118469
>gb|AC008403.8| Homo sapiens chromosome 19 clone CTC-273B12, complete sequence Length = 190076 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 103 gtggaagaagaagaggatgaggagg 127 ||||||||||||||||| ||||||| Sbjct: 82671 gtggaagaagaagaggaggaggagg 82647
>emb|CR607065.1| full-length cDNA clone CS0DC008YH24 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1894 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggct 129 ||||||||| ||||||||||||||| Sbjct: 753 ggaagaagaggaggatgaggaggct 777
>emb|CR605806.1| full-length cDNA clone CS0DJ015YO11 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 2402 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 gtggaagaagaagaggatgaggagg 127 ||||||||||||||||| ||||||| Sbjct: 875 gtggaagaagaagaggaggaggagg 899
>emb|CR599423.1| full-length cDNA clone CS0DC005YL24 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1775 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggct 129 ||||||||| ||||||||||||||| Sbjct: 768 ggaagaagaggaggatgaggaggct 792
>emb|CR457120.1| Homo sapiens full open reading frame cDNA clone RZPDo834A109D for gene FLJ10199, hypothetical protein FLJ10199; complete cds, incl. stopcodon Length = 762 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggct 129 ||||||||| ||||||||||||||| Sbjct: 351 ggaagaagaggaggatgaggaggct 375
>dbj|AK098467.1| Homo sapiens cDNA FLJ25601 fis, clone JTH13829 Length = 1827 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggct 129 ||||||||| ||||||||||||||| Sbjct: 783 ggaagaagaggaggatgaggaggct 807
>dbj|AK129922.1| Homo sapiens cDNA FLJ26412 fis, clone KDN00112 Length = 2072 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 ggaagaagaagaggatgaggaggct 129 ||||||||| ||||||||||||||| Sbjct: 1050 ggaagaagaggaggatgaggaggct 1074
>gb|AC107780.12| Mus musculus chromosome 8, clone RP23-61O10, complete sequence Length = 244047 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 gtggaagaagaagaggatgaggagg 127 |||||||| |||||||||||||||| Sbjct: 44148 gtggaagaggaagaggatgaggagg 44172
>gb|AC110576.12| Mus musculus chromosome 8, clone RP23-329K17, complete sequence Length = 224141 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 103 gtggaagaagaagaggatgaggagg 127 ||||||||||||||||| ||||||| Sbjct: 4613 gtggaagaagaagaggaggaggagg 4589
>dbj|AP001148.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-762L8, complete sequences Length = 169340 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 373 tgtgactgaattttatgcagctattaatt 401 ||||||||||||||||| ||||||||||| Sbjct: 161664 tgtgactgaattttatg-agctattaatt 161691
>emb|BX465216.5| Mouse DNA sequence from clone RP23-282I18 on chromosome 4, complete sequence Length = 97410 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 105 ggaagaagaagaggatgaggaggctcaagagga 137 ||||||||||||||| ||||||| |||||||| Sbjct: 72982 ggaagaagaagaggaggaggaggagcaagagga 72950
>dbj|AB067525.2| Homo sapiens mRNA for KIAA1938 protein, partial cds Length = 9768 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 gtggaagaagaagaggatgaggagg 127 ||||||||||||||||| ||||||| Sbjct: 7958 gtggaagaagaagaggaggaggagg 7982
>gb|AY105040.1| Zea mays PCO097024 mRNA sequence Length = 2126 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 gaagaagaagaggatgaggag 126 ||||||||||||||||||||| Sbjct: 82 gaagaagaagaggatgaggag 102 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 73,595,497 Number of extensions: 4676848 Number of successful extensions: 389927 Number of sequences better than 10.0: 423 Number of HSP's gapped: 389925 Number of HSP's successfully gapped: 432 Length of query: 437 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 415 Effective length of database: 18,508,616,841 Effective search space: 7681075989015 Effective search space used: 7681075989015 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 13 (26.3 bits)