ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf70b04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK100064:Os01g0730500 26 5.7
2AK108715:Os05g0529700 26 7.4
3AK064168:Os05g0529700 26 7.4

>AK100064:Os01g0730500 |
          Length = 342
 Score = 26.2 bits (56), Expect = 5.7
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 159 AA*RWRGFDRKGRDKNEIYK 100
           AA RWR + RKG DK   +K
Sbjct: 314 AARRWREYSRKGADKPPTFK 333



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>AK108715:Os05g0529700 |
          Length = 344

 Score = 25.8 bits (55), Expect = 7.4
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 159 AA*RWRGFDRKGRDKNEIYK 100
           AA RWR + RKG D+   YK
Sbjct: 316 AARRWREYSRKGADRPPEYK 335



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>AK064168:Os05g0529700 |
          Length = 350

 Score = 25.8 bits (55), Expect = 7.4
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 159 AA*RWRGFDRKGRDKNEIYK 100
           AA RWR + RKG D+   YK
Sbjct: 322 AARRWREYSRKGADRPPEYK 341


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 3,923,382
Number of extensions: 51365
Number of successful extensions: 109
Number of sequences better than 10.0: 3
Number of HSP's gapped: 109
Number of HSP's successfully gapped: 3
Length of query: 78
Length of database: 15,399,855
Length adjustment: 49
Effective length of query: 29
Effective length of database: 13,437,846
Effective search space: 389697534
Effective search space used: 389697534
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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