>LOC_Os12g19394:12012.t004152:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
           precursor, putative, expressed
          Length = 1344
 Score =  279 bits (603), Expect(2) = e-101
 Identities = 105/125 (84%), Positives = 118/125 (94%)
 Frame = +1 / +3

                                                                       
Query: 247 QVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYY 426
           QVWPIEGIKKFETLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYY
Sbjct: 468 QVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYY 647

                                                                       
Query: 427 DGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 606
           DGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPPG
Sbjct: 648 DGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 827

                
Query: 607 CEESG 621
           CEESG
Sbjct: 828 CEESG 842



 Score =  109 bits (233), Expect(2) = e-101
 Identities = 48/51 (94%), Positives = 48/51 (94%)
 Frame = +1 / +3

                                                              
Query: 100 AMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQV 252
           AMAPTVMASSATSVAPFQGLKSTAGLPVSRRSN A LGSVSNGGRI CMQV
Sbjct: 204 AMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNSAGLGSVSNGGRISCMQV 356



 Score =  196 bits (422), Expect(2) = 2e-61
 Identities = 87/125 (69%), Positives = 95/125 (76%)
 Frame = -3 / -3

                                                                       
Query: 620 PDSSQPGGLKAMKLTHCT*RMLSNPMMRTYASGYXXXXXXXXXXTCVASVHPNIGSFHIV 441
           PDSSQPGGL AMKL +CT   LS PMMRT ASGY          T VASVHPNIGSFH+V
Sbjct: 841 PDSSQPGGL*AMKLINCTCLTLSKPMMRTNASGYAFLASSSSLSTWVASVHPNIGSFHMV 662

                                                                       
Query: 440 QYRPS*YPGDALCSRKMNPTLLNSRQGTHLERIR*STCLRRASVLSGGK*DRVSNFLMPS 261
           QY PS*YPGD   SR  NPTLLNSRQGTHL+R R S C +R+S +SGG+ DRVSNFLMPS
Sbjct: 661 QYLPS*YPGDLWFSR*TNPTLLNSRQGTHLDRSRYSICFKRSSTVSGGRYDRVSNFLMPS 482

                
Query: 260 MGHTC 246
           +GHTC
Sbjct: 481 IGHTC 467



 Score = 63.8 bits (133), Expect(2) = 2e-61
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -3 / -3

                                       
Query: 182 TGRPAVDLSPWKGATEVADEAITVGAMA 99
           TG PAVDLSPWKGATEVADEAITVGA+A
Sbjct: 286 TGSPAVDLSPWKGATEVADEAITVGAIA 203



 Score =  135 bits (289), Expect(3) = 1e-41
 Identities = 56/78 (71%), Positives = 65/78 (83%)
 Frame = -2 / -2

                                                                       
Query: 480 GVGASEHRQLPHCPVPAIVVPRRCVVLTEDEPNLAELEARHPLGADQVVDLLKEGLRAEW 301
           G+ ASEHRQLPH PVPAI+VPRR VVLT DEP+L +LEARHP G +QV+DLL+E L  E 
Sbjct: 701 GISASEHRQLPHGPVPAIIVPRRPVVLTVDEPDLTKLEARHPFGPEQVLDLLQEVLDRER 522

                             
Query: 300 WQVRQGLELLDALDGPHL 247
           WQVRQGL+LLDA + PHL
Sbjct: 521 WQVRQGLKLLDAFNRPHL 468



 Score = 46.0 bits (94), Expect(3) = 1e-41
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = -1 / -1

                                
Query: 160 *APGKERRRWPMRPSRWGPWL 98
           *APG+E+RRWP RPSRW P L
Sbjct: 264 *APGREQRRWPTRPSRWAPLL 202



 Score = 33.1 bits (66), Expect(3) = 1e-41
 Identities = 18/27 (66%), Positives = 19/27 (70%)
 Frame = -1 / -1

                                      
Query: 619 RTPRSLVA*RR*S*RTAPDACCRIR*C 539
           RTPR+  A RR*S* TAP   CR R*C
Sbjct: 840 RTPRNPGACRR*S*STAPA*RCRSR*C 760



 Score =  102 bits (217), Expect(3) = 8e-38
 Identities = 49/79 (62%), Positives = 56/79 (70%)
 Frame = +3 / +2

                                                                       
Query: 246 AGVAHRGHQEVRDPVLLATTQHGGPP*AGRLPDPLQVGALPRVQQGWVHLP*AQRISWVL 425
           AGVA   HQEV DPV+ AT    GP  A R+P P+Q+GALPRV  G V LP*  ++SWVL
Sbjct: 467 AGVAD*RHQEV*DPVVPATAHGRGPLEADRVPAPVQMGALPRV**GRVRLP*EPQVSWVL 646

                              
Query: 426 RWPVLDNVEAAYVRMHRRH 482
            W VLD+VEAAYVRMH  H
Sbjct: 647 *WQVLDHVEAAYVRMH*CH 703



 Score = 51.0 bits (105), Expect(3) = 8e-38
 Identities = 20/34 (58%), Positives = 26/34 (76%)
 Frame = +3 / +2

                                             
Query: 531 VCPHHRIRQHASGAVRQLHRLQATRLRGVRQGIN 632
           +C HHR+RQ  +GAV  LHRLQA  LRGVR+ ++
Sbjct: 752 ICSHHRLRQRQAGAVD*LHRLQAPGLRGVRRKLS 853



 Score = 48.3 bits (99), Expect(3) = 8e-38
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +3 / +2

                                  
Query: 99  SHGPHRDGLIGHLRRSFPGAQVH 167
           S+G HRDGL+GHLR S PGAQ+H
Sbjct: 203 SNGAHRDGLVGHLRCSLPGAQIH 271



 Score = 72.1 bits (151), Expect(3) = 8e-20
 Identities = 31/44 (70%), Positives = 34/44 (77%)
 Frame = -1 / -1

                                                       
Query: 481 WRRCIRT*AASTLSSTGHRSTQEMRCAHGR*TQPC*TRGKAPTW 350
           W +CIRT*AAST SST H STQE   +HGR T+P *TRGKAP W
Sbjct: 702 WHQCIRT*AASTWSSTCHHSTQETCGSHGRRTRPY*TRGKAPIW 571



 Score = 33.1 bits (66), Expect(3) = 8e-20
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = -2 / -2

                              
Query: 591 GDEADALHLTHVVESDDAD 535
           GDEA+ LHL  VVE+DDA+
Sbjct: 812 GDEANQLHLPDVVEADDAN 756



 Score = 29.5 bits (58), Expect(3) = 8e-20
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -1 / -1

                                
Query: 307 *VVASKTGSRTS*CPRWATPA 245
           * VA  TGS+TS*C + ATPA
Sbjct: 528 *AVAGTTGSQTS*CLQSATPA 466



 Score = 52.8 bits (109), Expect(2) = 1e-11
 Identities = 21/26 (80%), Positives = 21/26 (80%)
 Frame = +2 / +1

                                     
Query: 404 TTHLLGTTMAGTGQCGSCLCSDAPTP 481
           TT LLGT MAGTG CGSCLCSDA  P
Sbjct: 625 TTGLLGTMMAGTGPCGSCLCSDALMP 702



 Score = 36.8 bits (74), Expect(2) = 1e-11
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = +2 / +1

                             
Query: 248 RCGPSRASRSSRPCLTCH 301
           RCG  +ASRS RPC TCH
Sbjct: 469 RCGRLKASRSLRPCRTCH 522

>LOC_Os12g19381:12012.t01783:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
           precursor, putative, expressed
          Length = 1193

 Score =  279 bits (604), Expect(2) = e-100
 Identities = 105/126 (83%), Positives = 119/126 (94%)
 Frame = +1 / +2

                                                                       
Query: 244 MQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGY 423
           +QVWPIEGIKKFETLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGY
Sbjct: 344 IQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGY 523

                                                                       
Query: 424 YDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPP 603
           YDGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPP
Sbjct: 524 YDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPP 703

                 
Query: 604 GCEESG 621
           GCEESG
Sbjct: 704 GCEESG 721



 Score =  105 bits (224), Expect(2) = e-100
 Identities = 45/54 (83%), Positives = 49/54 (90%)
 Frame = +1 / +2

                                                                 
Query: 100 AMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPI 261
           AMAPTVMASSATSVAPFQGLKSTAGLPVSRRS  +  G+VSNGGRI+CMQV+ I
Sbjct: 89  AMAPTVMASSATSVAPFQGLKSTAGLPVSRRSTNSGFGNVSNGGRIKCMQVYMI 250



 Score =  139 bits (298), Expect(3) = 2e-53
 Identities = 58/79 (73%), Positives = 67/79 (84%)
 Frame = -2 / -2

                                                                       
Query: 480 GVGASEHRQLPHCPVPAIVVPRRCVVLTEDEPNLAELEARHPLGADQVVDLLKEGLRAEW 301
           G+GA+EH QLPH P+PAIVVP R VVLT DE NLAELEARHPLG+ QV+DLL++ L  EW
Sbjct: 580 GIGAAEHGQLPHGPIPAIVVPGRPVVLTVDESNLAELEARHPLGSKQVLDLLQKILHGEW 401

                              
Query: 300 WQVRQGLELLDALDGPHLH 244
           WQVR GLELLDAL+ PHL+
Sbjct: 400 WQVR*GLELLDALNWPHLN 344



 Score = 59.7 bits (124), Expect(3) = 2e-53
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = -3 / -3

                                       
Query: 182 TGRPAVDLSPWKGATEVADEAITVGAMA 99
           TG PAVDLSPW GATEVA+EAITVGA+A
Sbjct: 171 TGSPAVDLSPWNGATEVAEEAITVGAIA 88



 Score = 54.7 bits (113), Expect(3) = 2e-53
 Identities = 24/33 (72%), Positives = 26/33 (78%)
 Frame = -3 / -3

                                            
Query: 620 PDSSQPGGLKAMKLTHCT*RMLSNPMMRTYASG 522
           PDSSQPGGL AMKL +CT   LS PM+RT ASG
Sbjct: 720 PDSSQPGGL*AMKLINCTCLTLSKPMIRTKASG 622



 Score =  167 bits (360), Expect(3) = 2e-48
 Identities = 72/126 (57%), Positives = 91/126 (72%)
 Frame = +3 / +1

                                                                       
Query: 240 VHAGVAHRGHQEVRDPVLLATTQHGGPP*AGRLPDPLQVGALPRVQQGWVHLP*AQRISW 419
           +++GVA+ GHQEVRDP++ ATT  GG   A R+P  +QVGALPRVQQGW+ LP*  ++S 
Sbjct: 340 IYSGVAN*GHQEVRDPIVPATTHRGGSFEADRVPASIQVGALPRVQQGWIRLP*EPQVSR 519

                                                                       
Query: 420 VLRWPVLDNVEAAYVRMHRRHTXXXXXXXXXXXVP*RVCPHHRIRQHASGAVRQLHRLQA 599
           VLRW VLD+VEAA+VR+HR H            +P  +CP+HR+RQ  +GAV  LHRLQA
Sbjct: 520 VLRWQVLDHVEAAHVRLHRCHPGAQGARGGQEGLPRCLCPYHRLRQRQAGAVD*LHRLQA 699

                 
Query: 600 TRLRGV 617
            RLRGV
Sbjct: 700 PRLRGV 717



 Score = 47.3 bits (97), Expect(3) = 2e-48
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +3 / +1

                                 
Query: 102 HGPHRDGLIGHLRRSFPGAQVH 167
           +GPHRDGL+GHLR S P AQVH
Sbjct: 91  YGPHRDGLLGHLRGSIPRAQVH 156



 Score = 21.7 bits (41), Expect(3) = 2e-48
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +3 / +1

                   
Query: 231 KDQVHAGV 254
           KDQVHAG+
Sbjct: 220 KDQVHAGI 243



 Score =  136 bits (291), Expect(3) = 1e-41
 Identities = 57/78 (73%), Positives = 65/78 (83%)
 Frame = -3 / -3

                                                                       
Query: 482 VASVHPNIGSFHIVQYRPS*YPGDALCSRKMNPTLLNSRQGTHLERIR*STCLRRASVLS 303
           VASV PN+GSFH+VQY PS*YPGD   SR  NPTLLNSRQGTHL+R R S C +R+S +S
Sbjct: 582 VASVQPNMGSFHMVQYLPS*YPGDLWFSR*TNPTLLNSRQGTHLDRSRYSICFKRSSTVS 403

                             
Query: 302 GGK*DRVSNFLMPSMGHT 249
           GG+ DRVSNFLMPS+GHT
Sbjct: 402 GGRYDRVSNFLMPSIGHT 349



 Score = 42.8 bits (87), Expect(3) = 1e-41
 Identities = 16/20 (80%), Positives = 16/20 (80%)
 Frame = -1 / -1

                               
Query: 163 T*APGKERRRWPMRPSRWGP 104
           T*A G E RRWP RPSRWGP
Sbjct: 152 T*ALGMEPRRWPRRPSRWGP 93



 Score = 35.0 bits (70), Expect(3) = 1e-41
 Identities = 19/33 (57%), Positives = 22/33 (66%)
 Frame = -1 / -1

                                            
Query: 619 RTPRSLVA*RR*S*RTAPDACCRIR*CGHTRQG 521
           +TPR+L A RR*S* TAP   CR R* G   +G
Sbjct: 719 QTPRNLGACRR*S*STAPA*RCRSR*YGQRHRG 621



 Score = 74.8 bits (157), Expect(3) = 6e-22
 Identities = 31/44 (70%), Positives = 34/44 (77%)
 Frame = -1 / -1

                                                       
Query: 481 WRRCIRT*AASTLSSTGHRSTQEMRCAHGR*TQPC*TRGKAPTW 350
           W RC RT AAST S+T HRST+E   +HGR  QPC*TRGKAPTW
Sbjct: 581 WHRCSRTWAASTWSNTCHRSTRETCGSHGRRIQPC*TRGKAPTW 450



 Score = 33.6 bits (67), Expect(3) = 6e-22
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -2 / -2

                              
Query: 591 GDEADALHLTHVVESDDAD 535
           GDEA+ LHL  VVE+DD D
Sbjct: 691 GDEANQLHLPDVVEADDTD 635



 Score = 33.6 bits (67), Expect(3) = 6e-22
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = -1 / -1

                               
Query: 307 *VVASKTGSRTS*CPRWATP 248
           *VVA   GSRTS*CP+ ATP
Sbjct: 407 *VVAGTIGSRTS*CPQLATP 348



 Score = 47.3 bits (97), Expect(2) = 6e-11
 Identities = 19/26 (73%), Positives = 19/26 (73%)
 Frame = +2 / +3

                                     
Query: 404 TTHLLGTTMAGTGQCGSCLCSDAPTP 481
           TT L GTTMAG G CGSC CS AP P
Sbjct: 504 TTGLPGTTMAGIGPCGSCPCSAAPMP 581



 Score = 40.0 bits (81), Expect(2) = 6e-11
 Identities = 15/19 (78%), Positives = 15/19 (78%)
 Frame = +2 / +3

                              
Query: 248 RCGPSRASRSSRPCLTCHH 304
           RCG  RASRSSRP  TCHH
Sbjct: 348 RCGQLRASRSSRPYRTCHH 404

>LOC_Os12g19470:12012.t01792:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
           precursor, putative, expressed
          Length = 2281

 Score =  279 bits (603), Expect(2) = 3e-99
 Identities = 105/125 (84%), Positives = 118/125 (94%)
 Frame = +1 / +3

                                                                       
Query: 247 QVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYY 426
           QVWPIEGIKKFETLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYY
Sbjct: 453 QVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYY 632

                                                                       
Query: 427 DGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 606
           DGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPPG
Sbjct: 633 DGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 812

                
Query: 607 CEESG 621
           CEESG
Sbjct: 813 CEESG 827



 Score =  104 bits (221), Expect(2) = 3e-99
 Identities = 44/51 (86%), Positives = 49/51 (96%)
 Frame = +1 / +2

                                                              
Query: 100 AMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQV 252
           AMAP+VMASSATSVAPFQGLKSTAGLPV+RRS+ +S G+VSNGGRIRCMQV
Sbjct: 203 AMAPSVMASSATSVAPFQGLKSTAGLPVNRRSSSSSFGNVSNGGRIRCMQV 355



 Score =  189 bits (407), Expect(2) = 2e-59
 Identities = 84/124 (67%), Positives = 94/124 (75%)
 Frame = -3 / -1

                                                                       
Query: 620 PDSSQPGGLKAMKLTHCT*RMLSNPMMRTYASGYXXXXXXXXXXTCVASVHPNIGSFHIV 441
           PDSSQPGGL AMKL +CT   LS PMMRT ASGY          T VASVHPN+GSFH+V
Sbjct: 826 PDSSQPGGLYAMKLINCTCLTLSKPMMRTKASGYAFFASSSSLSTWVASVHPNMGSFHMV 647

                                                                       
Query: 440 QYRPS*YPGDALCSRKMNPTLLNSRQGTHLERIR*STCLRRASVLSGGK*DRVSNFLMPS 261
           QY PS*YPGD   SR  NPTLLNS+QGTHL+R R S C +R+S ++GGK DRVSNFLMPS
Sbjct: 646 QYLPS*YPGDL*FSR*TNPTLLNSKQGTHLDRSRYSICFKRSSTVNGGKYDRVSNFLMPS 467

               
Query: 260 MGHT 249
           +GHT
Sbjct: 466 IGHT 455



 Score = 64.8 bits (135), Expect(2) = 2e-59
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -3 / -2

                                         
Query: 182 TGRPAVDLSPWKGATEVADEAITVGAMAVL 93
           TGRPAVDLSPWKGATEVADEAIT GA+A L
Sbjct: 285 TGRPAVDLSPWKGATEVADEAITEGAIASL 196



 Score =  118 bits (253), Expect(2) = 1e-30
 Identities = 62/132 (46%), Positives = 82/132 (62%)
 Frame = +3 / +2

                                                                       
Query: 240 VHAGVAHRGHQEVRDPVLLATTQHGGPP*AGRLPDPLQVGALPRVQQGWVHLP*AQRISW 419
           + +GVA  GH EVRD V+LA    GGP  A R+P P+ VGAL  VQQG + LP*  +I+ 
Sbjct: 446 IQSGVAD*GH*EVRDSVVLAAIDSGGPFEADRVPAPI*VGALLGVQQGRIRLP*ESQITR 625

                                                                       
Query: 420 VLRWPVLDNVEAAYVRMHRRHTXXXXXXXXXXXVP*RVCPHHRIRQHASGAVRQLHRLQA 599
           +L   VLD+VE A+V MHR H            +P* +  HH + Q  +GAV QLHR+ A
Sbjct: 626 IL*R*VLDHVETAHVWMHRCHPSAQGARGGKEGIP*CLRSHHWL*QR*AGAVNQLHRV*A 805

                       
Query: 600 TRLRGVRQGINS 635
           T LRGVR+ +++
Sbjct: 806 TGLRGVRRQLSA 841



 Score = 39.1 bits (79), Expect(2) = 1e-30
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = +3 / +1

                                  
Query: 99  SHGPHRDGLIGHLRRSFPGAQVH 167
           S+G   DG +GHLR S PGAQVH
Sbjct: 202 SNGSLGDGFVGHLRGSLPGAQVH 270



 Score =  112 bits (240), Expect(3) = 1e-30
 Identities = 46/78 (58%), Positives = 61/78 (78%)
 Frame = -2 / -3

                                                                       
Query: 480 GVGASEHRQLPHCPVPAIVVPRRCVVLTEDEPNLAELEARHPLGADQVVDLLKEGLRAEW 301
           G+GAS+H Q PH PVP ++V    V+LT DE +LAEL+ARHPL ++QV+DLL++ L  +W
Sbjct: 686 GIGASKHGQFPHGPVPTVIVSG*SVILTVDESDLAELQARHPLRSEQVLDLLQKVLHCQW 507

                             
Query: 300 WQVRQGLELLDALDGPHL 247
            QVRQ LELL+AL+ PHL
Sbjct: 506 RQVRQSLELLNALNRPHL 453



 Score = 35.0 bits (70), Expect(3) = 1e-30
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -1 / -3

                                 
Query: 163 T*APGKERRRWPMRPSRWGPWL 98
           T*APG+E RRWP +PS   P L
Sbjct: 266 T*APGREPRRWPTKPSPREPLL 201



 Score = 30.9 bits (61), Expect(3) = 1e-30
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = -1 / -2

                                           
Query: 616 TPRSLVA*RR*S*RTAPDACCRIR*CGHTRQG 521
           TPR+ VA  R*S* TAP   C+ +*C    QG
Sbjct: 822 TPRNPVAYTR*S*LTAPA*RCQSQ*CERRHQG 727



 Score = 51.5 bits (106), Expect(3) = 5e-13
 Identities = 23/43 (53%), Positives = 28/43 (65%)
 Frame = -1 / -2

                                                      
Query: 481 WRRCIRT*AASTLSSTGHRSTQEMRCAHGR*TQPC*TRGKAPT 353
           W RCI+T A ST SST   S + +  +HGR  +PC*T  KAPT
Sbjct: 687 WHRCIQTWAVSTWSSTYRHSIRVICDSHGRRIRPC*TPSKAPT 559



 Score = 30.4 bits (60), Expect(3) = 5e-13
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -1 / -2

                              
Query: 304 VVASKTGSRTS*CPRWATP 248
           + AS T SRTS*CP+ ATP
Sbjct: 510 MAASTTESRTS*CPQSATP 454



 Score = 29.5 bits (58), Expect(3) = 5e-13
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = -2 / -3

                                 
Query: 588 DEADALHLTHVVESDDADIRVR 523
           DEAD LHL +VV+++DA+  +R
Sbjct: 794 DEAD*LHLPNVVKANDANEGIR 729



 Score = 35.4 bits (71), Expect(2) = 1e-05
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +2 / +1

                               
Query: 422 TTMAGTGQCGSCLCSDAPTP 481
           T   GTG CG+C C DAP P
Sbjct: 628 TMTVGTGPCGNCPCLDAPMP 687



 Score = 33.6 bits (67), Expect(2) = 1e-05
 Identities = 13/19 (68%), Positives = 13/19 (68%)
 Frame = +2 / +1

                              
Query: 248 RCGPSRASRSSRPCLTCHH 304
           RCG  RA RSSR C TC H
Sbjct: 454 RCGRLRALRSSRLCRTCRH 510

>LOC_Os12g17600:12012.t01612:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
           precursor, putative, expressed
          Length = 1248

 Score =  276 bits (598), Expect(2) = 3e-97
 Identities = 104/124 (83%), Positives = 117/124 (94%)
 Frame = +1 / +2

                                                                       
Query: 250 VWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYD 429
           VWPIEGIKKFETLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYYD
Sbjct: 515 VWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYD 694

                                                                       
Query: 430 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGC 609
           GRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPPGC
Sbjct: 695 GRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGC 874

               
Query: 610 EESG 621
           EESG
Sbjct: 875 EESG 886



 Score = 99.6 bits (211), Expect(2) = 3e-97
 Identities = 41/50 (82%), Positives = 47/50 (94%)
 Frame = +1 / +1

                                                             
Query: 103 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQV 252
           MAP+VMASSAT+VAPFQGLKSTAG+PV+RRS  +S G+VSNGGRIRCMQV
Sbjct: 265 MAPSVMASSATTVAPFQGLKSTAGMPVARRSGNSSFGNVSNGGRIRCMQV 414



 Score =  191 bits (411), Expect(3) = 1e-59
 Identities = 86/124 (69%), Positives = 94/124 (75%)
 Frame = -3 / -1

                                                                       
Query: 620 PDSSQPGGLKAMKLTHCT*RMLSNPMMRTYASGYXXXXXXXXXXTCVASVHPNIGSFHIV 441
           PDSSQPGGL AMKL  CT   LS PM+RT ASGY          T VASVHPN+GSFH+V
Sbjct: 885 PDSSQPGGL*AMKLMSCTCLTLSKPMIRTNASGYAFLASSSSLSTWVASVHPNMGSFHMV 706

                                                                       
Query: 440 QYRPS*YPGDALCSRKMNPTLLNSRQGTHLERIR*STCLRRASVLSGGK*DRVSNFLMPS 261
           QY PS*YPGD   SR  NPTLLNSRQGTHLER R S C RR+S +SGG+*+RVSNFLMPS
Sbjct: 705 QYLPS*YPGDLWFSR*TNPTLLNSRQGTHLERSRYSICFRRSSTVSGGR*ERVSNFLMPS 526

               
Query: 260 MGHT 249
           +GHT
Sbjct: 525 IGHT 514



 Score = 55.1 bits (114), Expect(3) = 1e-59
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -3 / -2

                                       
Query: 182 TGRPAVDLSPWKGATEVADEAITVGAMA 99
           TG PAVDLSPWKGAT VAD+AIT GA++
Sbjct: 344 TGMPAVDLSPWKGATVVADDAITEGAIS 261



 Score = 23.5 bits (45), Expect(3) = 1e-59
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2 / -1

                       
Query: 258 GPHLHAPDPSTV 223
           G +LHAPDP+ +
Sbjct: 420 GYYLHAPDPAAI 385



 Score =  165 bits (355), Expect(2) = 3e-46
 Identities = 74/126 (58%), Positives = 87/126 (69%)
 Frame = +3 / +1

                                                                       
Query: 240 VHAGVAHRGHQEVRDPVLLATTQHGGPP*AGRLPDPLQVGALPRVQQGWVHLP*AQRISW 419
           V+ GVA  GHQEVRDP+L AT   GGPP A R+P P QVGALPRVQQG + LP*  +I  
Sbjct: 505 VYLGVAD*GHQEVRDPLLPATAHRGGPPEADRVPAPFQVGALPRVQQGRIRLP*EPQIPR 684

                                                                       
Query: 420 VLRWPVLDNVEAAYVRMHRRHTXXXXXXXXXXXVP*RVCPHHRIRQHASGAVRQLHRLQA 599
           +LRW VLD+VEAA+VR+H RH            VP* + P+HR+RQ  +GA  QLHRLQA
Sbjct: 685 ILRWQVLDHVEAAHVRVH*RHPGAQGARGGQEGVP*CIRPYHRLRQRQAGAAHQLHRLQA 864

                 
Query: 600 TRLRGV 617
             LRGV
Sbjct: 865 PGLRGV 882



 Score = 44.1 bits (90), Expect(2) = 3e-46
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +3 / +3

                                
Query: 105 GPHRDGLIGHLRRSFPGAQVH 167
           GP RDG++GH RRS PGAQVH
Sbjct: 267 GPLRDGVVGHHRRSLPGAQVH 329



 Score =  121 bits (259), Expect(3) = 9e-37
 Identities = 54/79 (68%), Positives = 61/79 (77%)
 Frame = -2 / -3

                                                                       
Query: 480 GVGASEHRQLPHCPVPAIVVPRRCVVLTEDEPNLAELEARHPLGADQVVDLLKEGLRAEW 301
           GV A EH QLPH PVPAIVV    VVLT DE +LAELEA HPLG +QV+DLL+E L  E 
Sbjct: 745 GVSAPEHGQLPHGPVPAIVVSGGSVVLTVDESDLAELEAGHPLGTEQVLDLLQEVLHGER 566

                              
Query: 300 WQVRQGLELLDALDGPHLH 244
           WQV +GLELLDAL+ PHL+
Sbjct: 565 WQVGEGLELLDALNRPHLN 509



 Score = 39.6 bits (80), Expect(3) = 9e-37
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = -1 / -3

                                 
Query: 163 T*APGKERRRWPMRPSRWGPWL 98
           T*APG+ERR WP  PSR GP L
Sbjct: 325 T*APGRERRWWPTTPSRRGPSL 260



 Score = 36.8 bits (74), Expect(3) = 9e-37
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = -2 / -3

                                  
Query: 591 GDEADALHLTHVVESDDADIRVR 523
           GDEAD LHL  VVE+DD D  +R
Sbjct: 856 GDEADELHLPDVVEADDTDECIR 788



 Score = 68.9 bits (144), Expect(3) = 6e-20
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = -1 / -2

                                                       
Query: 481 WRRCIRT*AASTLSSTGHRSTQEMRCAHGR*TQPC*TRGKAPTW 350
           WR+C RT AAST SST HRS + +  +HGR  +PC*TRG+APTW
Sbjct: 746 WRQCTRTWAASTWSSTCHRSIRGICGSHGRRIRPC*TRGRAPTW 615



 Score = 33.6 bits (67), Expect(3) = 6e-20
 Identities = 20/34 (58%), Positives = 21/34 (61%)
 Frame = -1 / -2

                                             
Query: 619 RTPRSLVA*RR*S*RTAPDACCRIR*CGHTRQGT 518
           +TPRS  A RR*S*  AP   CR R* G   QGT
Sbjct: 884 QTPRSPGACRR*S**AAPA*RCRSR*YGRMHQGT 783



 Score = 32.7 bits (65), Expect(3) = 6e-20
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = -1 / -2

                               
Query: 307 *VVASKTGSRTS*CPRWATP 248
           * VA + GSRTS*CP+ ATP
Sbjct: 572 *AVAGRRGSRTS*CPQSATP 513



 Score = 42.8 bits (87), Expect(2) = 2e-08
 Identities = 18/26 (69%), Positives = 18/26 (69%)
 Frame = +2 / +3

                                     
Query: 404 TTHLLGTTMAGTGQCGSCLCSDAPTP 481
           TT    TTMAGTG CGSC CS A TP
Sbjct: 669 TTDPPDTTMAGTGPCGSCPCSGALTP 746



 Score = 35.9 bits (72), Expect(2) = 2e-08
 Identities = 14/18 (77%), Positives = 14/18 (77%)
 Frame = +2 / +3

                             
Query: 248 RCGPSRASRSSRPCLTCH 301
           RCG  RASRSSRP  TCH
Sbjct: 513 RCGRLRASRSSRPSPTCH 566

>LOC_Os02g05830:12002.t00481:unspliced-genomic ribulose bisphosphate carboxylase small chain SSU40B, chloroplast|
           precursor, putative, expressed
          Length = 1519

 Score =  134 bits (288), Expect(3) = 1e-42
 Identities = 48/78 (61%), Positives = 60/78 (76%)
 Frame = +1 / +3

                                                                       
Query: 385 GFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMR 564
           G I R ++  PGYYDGRYWT+WKLPMFGC+DA  VL EVEE ++EYPDA++R+I FD+ R
Sbjct: 750 GEIHRSNSRMPGYYDGRYWTLWKLPMFGCSDAAAVLREVEECRREYPDAFIRLIAFDSSR 929

                             
Query: 565 QVQCVSFIAFKPPGCEES 618
           Q QC+SF+  KPP    S
Sbjct: 930 QCQCMSFVVHKPPSAAAS 983



 Score = 59.3 bits (123), Expect(3) = 1e-42
 Identities = 18/38 (47%), Positives = 31/38 (81%)
 Frame = +1 / +2

                                                 
Query: 271 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV 384
           +++E +SYLPPLS +++ K++++++   WVPCLEF KV
Sbjct: 491 RRYEAMSYLPPLSAKSISKEIEFIMSKGWVPCLEFDKV 604



 Score = 24.0 bits (46), Expect(3) = 1e-42
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1 / +1

                            
Query: 202 ASLGSVSNGGRIRCMQV 252
           A  G+ SNG R  CMQV
Sbjct: 262 ARRGAASNGFRTYCMQV 312



 Score = 72.5 bits (152), Expect(2) = 1e-15
 Identities = 37/79 (46%), Positives = 44/79 (55%)
 Frame = -3 / -1

                                                                       
Query: 617 DSSQPGGLKAMKLTHCT*RMLSNPMMRTYASGYXXXXXXXXXXTCVASVHPNIGSFHIVQ 438
           +++  GGL   K  H   R+LS  M R  ASGY          T  AS HPNIGSFH VQ
Sbjct: 982 EAAADGGLWTTKDMHWHWRLLSKAMRRMKASGYSLRHSSTSRSTAAASEHPNIGSFHSVQ 803

                              
Query: 437 YRPS*YPGDALCSRKMNPT 381
           Y PS*YPG  L  R ++P+
Sbjct: 802 YLPS*YPGIRLLLRWISPS 746



 Score = 34.1 bits (68), Expect(2) = 1e-15
 Identities = 17/34 (50%), Positives = 21/34 (61%)
 Frame = -2 / -1

                                             
Query: 381 LAELEARHPLGADQVVDLLKEGLRAEWWQVRQGL 280
           L +LEAR P      +DLL +GLRA+  QVR  L
Sbjct: 601 LVKLEARDPSFGHDELDLLGDGLRAQGRQVRHRL 500



 Score = 43.7 bits (89), Expect(2) = 1e-06
 Identities = 20/33 (60%), Positives = 21/33 (63%)
 Frame = -2 / -3

                                            
Query: 477 VGASEHRQLPHCPVPAIVVPRRCVVLTEDEPNL 379
           V ASEHRQLP  PVP +VVPR   V   D P L
Sbjct: 842 VRASEHRQLPQRPVPPVVVPRHPAVAPVDLPLL 744



 Score = 32.2 bits (64), Expect(2) = 1e-06
 Identities = 18/39 (46%), Positives = 21/39 (53%)
 Frame = -3 / -2

                                                  
Query: 383 TLLNSRQGTHLERIR*STCLRRASVLSGGK*DRVSNFLM 267
           TL NSRQGTH   +  S  L     L GG+*D  S  L+
Sbjct: 603 TLSNSRQGTHPLDMMNSISLEMDFALRGGR*DIASYLLL 487



 Score = 41.4 bits (84), Expect(2) = 0.005
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = +2 / +1

                               
Query: 419 GTTMAGTGQCGSCLCSDAPT 478
           GTT  GTG+CGSC CSDA T
Sbjct: 784 GTTTGGTGRCGSCRCSDALT 843



 Score = 22.1 bits (42), Expect(2) = 0.005
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2 / +3

                             
Query: 245 CRCGPSRASRSSRPCLTC 298
           CR G    +  +R CLTC
Sbjct: 465 CRHGTLSPTGGTRRCLTC 518



 Score = 33.6 bits (67), Expect = 2.1
 Identities = 16/28 (57%), Positives = 17/28 (60%)
 Frame = -1 / -2

                                       
Query: 478 RRCIRT*AASTLSSTGHRSTQEMRCAHG 395
           R+ IRT AAST SST  RST    C  G
Sbjct: 843 RQSIRTSAASTASSTSRRSTPASGCCSG 760

>LOC_Os07g04180:12007.t00306:unspliced-genomic amino acid permease 6, putative, expressed|
          Length = 6048

 Score = 36.8 bits (74), Expect(2) = 0.21
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +1 / -1

                                                       
Query: 763  PTWLEKACSYVNAIGGYVYAHAHNIIQSVDYVICIRVINEKHL 891
            PTW+ +  + ++++ GYVY   H  I  + Y  CI +I+  +L
Sbjct: 2958 PTWMIQTKTNMSSVPGYVYTFLHASILFLPYQKCIFIISASYL 2830



 Score = 23.1 bits (44), Expect(2) = 0.21
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2 / -1

                                    
Query: 233  GSGACRCGPSRASRSSRPCLTCHH 304
            G G C+   ++  +SS   LTC H
Sbjct: 3141 GVGVCKGNVTK*LKSSPDFLTCRH 3070



 Score = 35.4 bits (71), Expect = 0.58
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2 / +1

                                
Query: 822  CIYIATDSIHIRACFLEPCW 763
            CIYIA D+ H+  C   PCW
Sbjct: 2899 CIYIAWDT*HVGFCLYHPCW 2958

>LOC_Os01g08470:12001.t00725:unspliced-genomic protein binding protein, putative, expressed|
          Length = 2275

 Score = 28.6 bits (56), Expect(3) = 0.78
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +1 / +2

                                                   
Query: 94  STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLG 213
           +TA A T   +SAT  +P    ++TA    SRR++    G
Sbjct: 722 TTASASTSRTTSATRRSPSSSSRTTASAAASRRASATCPG 841



 Score = 23.5 bits (45), Expect(3) = 0.78
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +2 / +2

                      
Query: 260  SRASRSSRPC 289
            S ASRSSRPC
Sbjct: 1232 SSASRSSRPC 1261



 Score = 23.1 bits (44), Expect(3) = 0.78
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3 / +2

                              
Query: 528  RVCPHHRIRQHASGAVRQ 581
            R C HH  R+H + A  Q
Sbjct: 1469 RSCRHHHRRRHPAAAQHQ 1522

>LOC_Os08g23640:12008.t02136:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 1858

 Score = 30.4 bits (60), Expect(2) = 0.79
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = +1 / -2

                                                         
Query: 124  SSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWP 258
            S++   APF   ++TA   ++R ++   + S  +GGR+ C+ + P
Sbjct: 1002 SASPGRAPFGWPRATAPSCLTRGTSNTFVASTPSGGRVSCLGLRP 868



 Score = 25.8 bits (50), Expect(2) = 0.79
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +1 / -3

                                    
Query: 406 NASPGYYDGRYWTMWKLPMFGCTDA 480
           NAS G    + WTMW      C  A
Sbjct: 197 NASRGAVPSKLWTMWSAASRTCARA 123

>LOC_Os09g38640:12009.t03332:unspliced-genomic IBR domain containing protein, expressed|
          Length = 1777

 Score = 34.5 bits (69), Expect = 1.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1 / +3

                               
Query: 142  RRRWPMRPSRWGPWLYYVG 86
            RRRW +RP+RW  W +  G
Sbjct: 1527 RRRWRIRPARWSTWSWLTG 1583

>LOC_Os09g31210:12009.t02763:unspliced-genomic protein kinase domain containing protein, expressed|
          Length = 1734

 Score = 27.2 bits (53), Expect(2) = 1.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2 / +2

                            
Query: 239 GACRCGPSRASRSSRPC 289
           G CRC P   +R+SR C
Sbjct: 275 GRCRCCPGSRTRTSRRC 325



 Score = 24.4 bits (47), Expect(2) = 1.2
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +1 / +2

                                       
Query: 160 KSTAGLPVSRRSNGASLGSVSNGGRIRC 243
           +S+   P SRR  G        GGR RC
Sbjct: 206 RSSTRGPSSRRRRGRGTRRGGRGGRCRC 289

>LOC_Os04g38520:12004.t03423:unspliced-genomic expressed protein|
          Length = 2450

 Score = 33.6 bits (67), Expect(2) = 1.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2 / -3

                              
Query: 251  CGPSRASRSSRPCLTCHH 304
            C P R+  S RPC +CHH
Sbjct: 1758 CSPGRSCCSCRPCTSCHH 1705



 Score = 22.1 bits (42), Expect(2) = 1.4
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1 / -3

                                    
Query: 823  HAHNIIQSVDYVICIRVINEKHLC 894
            H    I S   V+C    + +HLC
Sbjct: 1575 HLRTCIASRHRVLCTEACSPQHLC 1504

>LOC_Os06g08640:12006.t00743:unspliced-genomic anthranilate N-benzoyltransferase protein 1, putative, expressed|
          Length = 1546

 Score = 33.6 bits (67), Expect = 2.1
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2 / +1

                                              
Query: 858  YIVDRLYNIMCMCIYIATDSIHIRACFLEPCWYM 757
            Y+ DR      MC+++ T  I++R C + PC Y+
Sbjct: 1405 YVYDRA*CKSVMCMHVRTVRIYVRTCRMLPCVYI 1506

>LOC_Os02g36000:12002.t03237:unspliced-genomic conserved hypothetical protein|
          Length = 704

 Score = 28.6 bits (56), Expect(2) = 2.6
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3 / +3

                                     
Query: 723 YLFLKMCVCPCSCTNMARESMLVCEC 800
           Y+++ +CVC C C  +     L C C
Sbjct: 192 YIYMCVCVCVCVCVCVCVYVDLCCTC 269



 Score = 24.4 bits (47), Expect(2) = 2.6
 Identities = 9/24 (37%), Positives = 10/24 (41%)
 Frame = +2 / +1

                                   
Query: 233 GSGACRCGPSRASRSSRPCLTCHH 304
           G+  C CG     R    C  CHH
Sbjct: 34  GAVCCMCGDHGLPRELFRCGHCHH 105

>LOC_Os10g36180:12010.t02903:unspliced-genomic expressed protein|
          Length = 1967

 Score = 33.1 bits (66), Expect = 2.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2 / +2

                                          
Query: 659  KCHCSFVNSDIALGFPSPLSFLFVPKNVCM 748
            KC C++ N  +   F S  SF F+  +VCM
Sbjct: 1796 KCQCAWNNKPLCTAFVSMCSFCFLMSSVCM 1885

>LOC_Os08g25240:12008.t02293:unspliced-genomic ATBPM1, putative|
          Length = 1260

 Score = 33.1 bits (66), Expect = 2.9
 Identities = 18/41 (43%), Positives = 21/41 (51%)
 Frame = -2 / -1

                                                    
Query: 480 GVGASEHRQLPHCPVPAIVVPRRCVVLTEDEPNLAELEARH 358
           GVG  EH  L H  V A   PRR  V+ +DE   AE  A +
Sbjct: 489 GVGGEEHGALDHEAVAAEQHPRRGEVVLQDELREAEAAAAY 367

>LOC_Os05g44100:12005.t03899:unspliced-genomic trehalose synthase, putative, expressed|
          Length = 4815

 Score = 33.1 bits (66), Expect = 2.9
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +1 / +2

                                             
Query: 94  STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRS 195
           S+A A    AS ++S APF   +STA  P  RRS
Sbjct: 884 SSAAASIASASGSSSTAPFPHRRSTARCPSERRS 985

>LOC_Os03g57540:12003.t05021:unspliced-genomic conserved hypothetical protein|
          Length = 423

 Score = 33.1 bits (66), Expect = 2.9
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -1 / +3

                       
Query: 142 RRRWPMRPSRWG 107
           RRRWP RP RWG
Sbjct: 18  RRRWPRRPQRWG 53

>LOC_Os06g04560:12006.t00346:unspliced-genomic PAK, putative, expressed|
          Length = 9635

 Score = 26.7 bits (52), Expect(2) = 3.4
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2 / +2

                           
Query: 812  MYMHMHIILYNLSTM 856
            ++ H+H+ILYNL  M
Sbjct: 7127 IFKHLHLILYNLHVM 7171



 Score = 23.1 bits (44), Expect(2) = 3.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3 / +1

                        
Query: 747  CPCSCTNMARES 782
            C CSC+   RES
Sbjct: 6961 CSCSCSESCRES 6996

>LOC_Os04g43800:12004.t03920:unspliced-genomic phenylalanine ammonia-lyase, putative, expressed|
          Length = 2745

 Score = 30.9 bits (61), Expect(2) = 3.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1 / -2

                             
Query: 154 PGKERRRWPMRPSRWGPW 101
           P + RRR P RP+RW  W
Sbjct: 374 PWRRRRRPPPRPARWSGW 321



 Score = 23.5 bits (45), Expect(2) = 3.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3 / -2

                                       
Query: 482  VASVHPNIGSFHIVQYRPS*YPGDALC 402
            +A VH +    H++  RP   PG  LC
Sbjct: 2312 LALVHGDEHLVHLLAGRPRLLPGQVLC 2232

>LOC_Os09g32740:12009.t02887:unspliced-genomic ubiquitin carboxyl-terminal hydrolase family protein, expressed|
          Length = 5676

 Score = 32.7 bits (65), Expect = 3.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3 / +3

                                     
Query: 735  KMCVCPCSCTNMARESMLVCECYRW 809
            + C C  SC ++AR     C C+RW
Sbjct: 2220 RRCSCSSSCFSLARR*CTTCICWRW 2294

>LOC_Os08g02490:12008.t00144:unspliced-genomic DNA-binding protein, putative, expressed|
          Length = 3849

 Score = 32.7 bits (65), Expect = 3.9
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1 / +2

                          
Query: 148 KERRRWPMRPSRWGP 104
           + RRR+P RP RWGP
Sbjct: 803 RSRRRYPWRPPRWGP 847

>LOC_Os07g33400:12007.t03019:unspliced-genomic F-box domain containing protein|
          Length = 4248

 Score = 32.7 bits (65), Expect = 3.9
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -1 / +3

                                                 
Query: 118  SRWGPWLYYVGI*LARRRHSGLRTGALGQQGLYNPWA 8
            SR  P L + G  + RRRH   R G L   G+Y  WA
Sbjct: 2349 SRRNPLLDFDGQTMQRRRHGVPREGVLLADGIYPEWA 2459

>LOC_Os05g32220:12005.t02818:unspliced-genomic 50S ribosomal protein L1, putative, expressed|
          Length = 4135

 Score = 32.7 bits (65), Expect = 3.9
 Identities = 17/38 (44%), Positives = 19/38 (50%)
 Frame = +1 / +1

                                                 
Query: 94  STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGAS 207
           S   APT  A S+ S AP      T   P SRRS G+S
Sbjct: 190 SRRCAPTTRACSSRSAAPPSPPSQTRRAPCSRRSRGSS 303

>LOC_Os03g03860:12003.t00267:unspliced-genomic expressed protein|
          Length = 5337

 Score = 32.7 bits (65), Expect = 3.9
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -1 / -3

                              
Query: 151  GKERRRWPMRPSRWGPWL 98
            G  RRRWP R SRW P L
Sbjct: 4726 GGGRRRWPQRRSRWWPGL 4673

>LOC_Os06g03800:12006.t00271:unspliced-genomic ankyrin repeat domain-containing protein 28, putative, expressed|
          Length = 5339

 Score = 32.2 bits (64), Expect = 5.4
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1 / +3

                                      
Query: 481  WRRCIRT*AASTLSSTGHRSTQEMRC 404
            WRRC  T +AST SST   ++   RC
Sbjct: 2733 WRRCTGTSSASTCSSTSAPASPRRRC 2810

>LOC_Os01g06270:12001.t00510:unspliced-genomic expressed protein|
          Length = 8187

 Score = 32.2 bits (64), Expect = 5.4
 Identities = 17/57 (29%), Positives = 24/57 (42%)
 Frame = +1 / +2

                                                                     
Query: 88   LHSTAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWP 258
            L  TA  P  +A  +   A     ++     VS R NG+ +    NG R+R    WP
Sbjct: 6269 LDGTAALPVAVAHCSPEPAAVAAGEAATASAVSERENGSGVRWSRNGVRLRRHPPWP 6439

>LOC_Os07g49290:12007.t04557:unspliced-genomic DNA binding protein, putative, expressed|
          Length = 2695

 Score = 31.8 bits (63), Expect = 7.4
 Identities = 16/48 (33%), Positives = 19/48 (39%)
 Frame = +3 / -2

                                                            
Query: 237  QVHAGVAHRGHQEVRDPVLLATTQHGGPP*AGRLPDPLQVGALPRVQQ 380
            Q HAG+   G   V    L A   HG       LP PL     P ++Q
Sbjct: 1320 QTHAGMVEHGRTAVAHEQLAAVVAHGAHVVVVLLPFPLHPCTTPHIRQ 1177

>LOC_Os07g27480:12007.t02442:unspliced-genomic ubiquinone biosynthesis protein ubiB, putative, expressed|
          Length = 9548

 Score = 31.8 bits (63), Expect = 7.4
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -2 / +1

                                
Query: 864  TYYIVDRLYNIMCMCIYIAT 805
            T YIV RL N  C+C+Y AT
Sbjct: 4531 TIYIVHRLANCACICLYRAT 4590

>LOC_Os07g07920:12007.t00671:unspliced-genomic lipid binding protein, putative, expressed|
          Length = 1519

 Score = 31.8 bits (63), Expect = 7.4
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1 / +1

                        
Query: 139 RRWPMRPSRWGPW 101
           RRWP R  RW PW
Sbjct: 115 RRWPWRRRRWSPW 153

>LOC_Os05g35240:12005.t03117:unspliced-genomic expressed protein|
          Length = 843

 Score = 31.8 bits (63), Expect = 7.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1 / -3

                         
Query: 136 RWPMRPSRWGPWLY 95
           RWP  P+RW PW +
Sbjct: 259 RWPALPTRWSPWCW 218

>LOC_Os02g02190:12002.t00119:unspliced-genomic high affinity nitrate transporter, putative, expressed|
          Length = 1860

 Score = 31.8 bits (63), Expect = 7.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1 / -2

                               
Query: 154  PGKERRRWPMRPSRWGPWL 98
            P + RRR P R  RWG W+
Sbjct: 1265 PARRRRRGPCRRRRWGGWM 1209

>LOC_Os02g02170:12002.t00117:unspliced-genomic high affinity nitrate transporter, putative, expressed|
          Length = 1922

 Score = 31.8 bits (63), Expect = 7.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1 / -2

                               
Query: 154  PGKERRRWPMRPSRWGPWL 98
            P + RRR P R  RWG W+
Sbjct: 1270 PARRRRRGPCRRRRWGGWM 1214

>LOC_Os01g71690:12001.t06462:unspliced-genomic recA protein, expressed|
          Length = 6171

 Score = 31.8 bits (63), Expect = 7.4
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2 / +2

                                 
Query: 885  FLINYSNTYYIVDRLYNIMCM 823
            FL NYSNT Y++ R   IMC+
Sbjct: 5918 FLKNYSNTEYVLRRTVYIMCL 5980

>LOC_Os01g27740:12001.t02475:unspliced-genomic dnaJ domain containing protein, expressed|
          Length = 4039

 Score = 31.8 bits (63), Expect = 7.4
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2 / +2

                                       
Query: 849 DRLYNIMCMCIYIATDSIHIRACFLEPC 766
           DR++++ C+C Y    SI+I   FL+ C
Sbjct: 377 DRIFSLFCICTYSLWFSIYITFFFLQIC 460

>LOC_Os04g20054:12004.t01745:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4446

 Score = 30.9 bits (61), Expect(2) = 7.4
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = +1 / -2

                                                         
Query: 124  SSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWP 258
            S++   APF   ++TA   ++R ++   + S  +GGR+ C+ + P
Sbjct: 3887 SASPGRAPFGWPRATAQSCLTRGTSNTFVASTPSGGRVSCLGLGP 3753



 Score = 23.1 bits (44), Expect(2) = 7.4
 Identities = 9/25 (36%), Positives = 10/25 (40%)
 Frame = +1 / -2

                                     
Query: 406  NASPGYYDGRYWTMWKLPMFGCTDA 480
            NAS G    + W MW      C  A
Sbjct: 3128 NASRGAVPSKLWMMWSAASRTCARA 3054

>LOC_Os03g11980:12003.t00999:unspliced-genomic beta-hexosaminidase beta chain precursor, putative, expressed|
          Length = 2578

 Score = 27.6 bits (54), Expect(2) = 8.3
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +2 / +3

                            
Query: 245 CRCGPSRASRSSRPCLT 295
           CRCGPSR     RP  T
Sbjct: 195 CRCGPSRRPSRGRPRCT 245



 Score = 25.4 bits (49), Expect(2) = 8.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3 / +1

                                  
Query: 537 PHHRIRQHASGAVRQLHRLQATR 605
           PH R    A+G+ RQLH L   R
Sbjct: 325 PHPRRAPRAAGSPRQLHPLPRPR 393


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 361,267,643
Number of extensions: 5617099
Number of successful extensions: 28884
Number of sequences better than 10.0: 36
Length of query: 305
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 256
Effective length of database: 52,856,264
Effective search space: 13531203584
Effective search space used: 13531203584
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)