| Clone Name | FLbaf64f19 |
|---|---|
| Clone Library Name | barley_pub |
>Q13769:CV019_HUMAN Uncharacterized protein C22orf19 - Homo sapiens (Human)| Length = 683 Score = 145 bits (367), Expect = 4e-34 Identities = 127/469 (27%), Positives = 203/469 (43%), Gaps = 41/469 (8%) Frame = +2 Query: 164 HDLLAETRASVEEVAARILAIKKDGAPKS--ELRELVAQMSLLLITLRQVNREILMEEDK 337 ++L T ++ + A I +K G E+ E Q + +TL+++NR + K Sbjct: 52 YELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKK 111 Query: 338 VKGETEAAKAPVDSTTLRLHNLLYEKNHYVKAIRSCLDFQTKHPGIELVPEEEFHRAAPA 517 + +T AK VD+ L+L NLLYE H K I CL+F++KH I+LV EEF++ AP Sbjct: 112 GRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPP 171 Query: 518 DIRDKTLAADAAHDLMLKRLNFELVQRKELCERHEKLEQQKNSLLGTIANQXXXXXXXXX 697 DI + H L RL++EL QRK L E++ + K +L I + Sbjct: 172 DISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQP 231 Query: 698 XXXXXXXXXXPVQQQLGMLHTKKLKQHHAAELLPSPLYIIYTQLLGQKEAFGENIEVEIN 877 PVQ+ L M + KQ+ A LP PLY+++ Q +A + + V I Sbjct: 232 RLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIE 291 Query: 878 GSTKDAQT-FAQQQAKQEMGTLSNXXXXXXXXXXXXXXXXXXXXXXXXXKTSKEASNPAL 1054 GS +A+ F + Q+ + S+ + + + P L Sbjct: 292 GSVDEAKALFKPPEDSQDDESDSD----------------------AEEEQTTKRRRPTL 329 Query: 1055 AYQL----------HPLKVVLHVYDTEDSGTKRRKLITMKFEYLAKLNVVCVGSEDSEGM 1204 QL HPL V+L + +DS ++ + F YL LN++ V ++ + M Sbjct: 330 GVQLDDKRKEMLKRHPLSVMLDLKCKDDS------VLHLTFYYLMNLNIMTVKAKVTTAM 383 Query: 1205 D-------------SNILCNLFPDDTGLELP-----HQMAKLYAGEAPNFSEKDSRPYKW 1330 + ++L L+P D G + P +Q K+ ++ + PY W Sbjct: 384 ELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQYQFDKVGILTLSDYVLELGHPYLW 443 Query: 1331 VQHLAGIDFLPEVPQS--VGDNSNRASR--------SADLSSGLALYRQ 1447 VQ L G+ F E PQ + D+S AS + S LAL++Q Sbjct: 444 VQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLKTRVQSRLALHKQ 492
>Q8DVP9:IF2_STRMU Translation initiation factor IF-2 - Streptococcus mutans| Length = 916 Score = 37.0 bits (84), Expect = 0.25 Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 3/108 (2%) Frame = +2 Query: 176 AETRASVEEVAARILAIKKDGAPKSELRELVAQMSLLLITLRQVNREILMEEDKVKGETE 355 A+ + SVE +AA +L I +G + + V ++ ITL + + +++ + Sbjct: 724 ADVQGSVEALAASLLKIDVEGVKVNVVHSAVGAINESDITLAEASNAVIIGFNVRPTPQA 783 Query: 356 AAKAPVDSTTLRLHNLLYEKNHYVK-AIRSCLD--FQTKHPGIELVPE 490 +A D +RLH+++Y+ V+ A++ LD F+ K G L+ E Sbjct: 784 RQQAEADEVEIRLHSIIYKVIEEVEDAMKGMLDPEFEEKIIGEALIRE 831
>Q48RU8:IF2_STRPM Translation initiation factor IF-2 - Streptococcus pyogenes serotype| M28 Length = 953 Score = 34.3 bits (77), Expect = 1.6 Identities = 25/108 (23%), Positives = 55/108 (50%), Gaps = 3/108 (2%) Frame = +2 Query: 176 AETRASVEEVAARILAIKKDGAPKSELRELVAQMSLLLITLRQVNREILMEEDKVKGETE 355 A+ + SVE +AA ++ I+ +G + + V ++ +TL + + +++ + Sbjct: 760 ADVQGSVEALAASLVKIEVEGVRVNVVHSAVGAINESDVTLAEASNAVIIGFNVRPTPQA 819 Query: 356 AAKAPVDSTTLRLHNLLYEKNHYV-KAIRSCLD--FQTKHPGIELVPE 490 +A D +RLH+++Y+ V +A++ LD +Q K G ++ E Sbjct: 820 RQQADTDDVEIRLHSIIYKVIEEVEEAMKGKLDPVYQEKILGEAIIRE 867
>Q5XAH1:IF2_STRP6 Translation initiation factor IF-2 - Streptococcus pyogenes serotype| M6 Length = 953 Score = 34.3 bits (77), Expect = 1.6 Identities = 25/108 (23%), Positives = 55/108 (50%), Gaps = 3/108 (2%) Frame = +2 Query: 176 AETRASVEEVAARILAIKKDGAPKSELRELVAQMSLLLITLRQVNREILMEEDKVKGETE 355 A+ + SVE +AA ++ I+ +G + + V ++ +TL + + +++ + Sbjct: 760 ADVQGSVEALAASLVKIEVEGVRVNVVHSAVGAINESDVTLAEASNAVIIGFNVRPTPQA 819 Query: 356 AAKAPVDSTTLRLHNLLYEKNHYV-KAIRSCLD--FQTKHPGIELVPE 490 +A D +RLH+++Y+ V +A++ LD +Q K G ++ E Sbjct: 820 RQQADTDDVEIRLHSIIYKVIEEVEEAMKGKLDPVYQEKILGEAIIRE 867
>Q8K644:IF2_STRP3 Translation initiation factor IF-2 - Streptococcus pyogenes serotype| M3 Length = 953 Score = 34.3 bits (77), Expect = 1.6 Identities = 25/108 (23%), Positives = 55/108 (50%), Gaps = 3/108 (2%) Frame = +2 Query: 176 AETRASVEEVAARILAIKKDGAPKSELRELVAQMSLLLITLRQVNREILMEEDKVKGETE 355 A+ + SVE +AA ++ I+ +G + + V ++ +TL + + +++ + Sbjct: 760 ADVQGSVEALAASLVKIEVEGVRVNVVHSAVGAINESDVTLAEASNAVIIGFNVRPTPQA 819 Query: 356 AAKAPVDSTTLRLHNLLYEKNHYV-KAIRSCLD--FQTKHPGIELVPE 490 +A D +RLH+++Y+ V +A++ LD +Q K G ++ E Sbjct: 820 RQQADTDDVEIRLHSIIYKVIEEVEEAMKGKLDPVYQEKILGEAIIRE 867
>Q99YG1:IF2_STRP1 Translation initiation factor IF-2 - Streptococcus pyogenes serotype| M1 Length = 953 Score = 34.3 bits (77), Expect = 1.6 Identities = 25/108 (23%), Positives = 55/108 (50%), Gaps = 3/108 (2%) Frame = +2 Query: 176 AETRASVEEVAARILAIKKDGAPKSELRELVAQMSLLLITLRQVNREILMEEDKVKGETE 355 A+ + SVE +AA ++ I+ +G + + V ++ +TL + + +++ + Sbjct: 760 ADVQGSVEALAASLVKIEVEGVRVNVVHSAVGAINESDVTLAEASNAVIIGFNVRPTPQA 819 Query: 356 AAKAPVDSTTLRLHNLLYEKNHYV-KAIRSCLD--FQTKHPGIELVPE 490 +A D +RLH+++Y+ V +A++ LD +Q K G ++ E Sbjct: 820 RQQADTDDVEIRLHSIIYKVIEEVEEAMKGKLDPVYQEKILGEAIIRE 867
>Q5M5V5:IF2_STRT2 Translation initiation factor IF-2 - Streptococcus thermophilus| (strain ATCC BAA-250 / LMG 18311) Length = 943 Score = 33.9 bits (76), Expect = 2.1 Identities = 26/108 (24%), Positives = 54/108 (50%), Gaps = 3/108 (2%) Frame = +2 Query: 176 AETRASVEEVAARILAIKKDGAPKSELRELVAQMSLLLITLRQVNREILMEEDKVKGETE 355 A+ + SVE +AA +L I +G + + V ++ ITL + + +++ + Sbjct: 751 ADVQGSVEALAASLLKIDVEGVRVNVVHSAVGAINESDITLAEASDAVVIGFNVRPTPQA 810 Query: 356 AAKAPVDSTTLRLHNLLYEKNHYVK-AIRSCLD--FQTKHPGIELVPE 490 +A D +RLH+++Y+ ++ A++ LD F+ K G ++ E Sbjct: 811 RQQAETDEVEIRLHSIIYKVIEEIEDAMKGMLDPEFEEKIIGEAVIRE 858
>Q5M1B9:IF2_STRT1 Translation initiation factor IF-2 - Streptococcus thermophilus| (strain CNRZ 1066) Length = 943 Score = 33.9 bits (76), Expect = 2.1 Identities = 26/108 (24%), Positives = 54/108 (50%), Gaps = 3/108 (2%) Frame = +2 Query: 176 AETRASVEEVAARILAIKKDGAPKSELRELVAQMSLLLITLRQVNREILMEEDKVKGETE 355 A+ + SVE +AA +L I +G + + V ++ ITL + + +++ + Sbjct: 751 ADVQGSVEALAASLLKIDVEGVRVNVVHSAVGAINESDITLAEASDAVVIGFNVRPTPQA 810 Query: 356 AAKAPVDSTTLRLHNLLYEKNHYVK-AIRSCLD--FQTKHPGIELVPE 490 +A D +RLH+++Y+ ++ A++ LD F+ K G ++ E Sbjct: 811 RQQAETDEVEIRLHSIIYKVIEEIEDAMKGMLDPEFEEKIIGEAVIRE 858
>Q9Y2K3:MYH15_HUMAN Myosin-15 - Homo sapiens (Human)| Length = 1946 Score = 33.5 bits (75), Expect = 2.8 Identities = 38/164 (23%), Positives = 61/164 (37%) Frame = +2 Query: 179 ETRASVEEVAARILAIKKDGAPKSELRELVAQMSLLLITLRQVNREILMEEDKVKGETEA 358 ET A+VEE ++ K +L V ++S + ++N E+ K++ E Sbjct: 908 ETLANVEEQCEWLIK------SKIQLEARVKELSERVEEEEEINSELTARGRKLEDECFE 961 Query: 359 AKAPVDSTTLRLHNLLYEKNHYVKAIRSCLDFQTKHPGIELVPEEEFHRAAPADIRDKTL 538 K +D L EK T+H L E EF + + Sbjct: 962 LKKEIDDLETMLVKSEKEKR------------TTEHKVKNLTEEVEFLNEDISKLNRAAK 1009 Query: 539 AADAAHDLMLKRLNFELVQRKELCERHEKLEQQKNSLLGTIANQ 670 AH L L+ E + L + + KLEQQ + L G + + Sbjct: 1010 VVQEAHQQTLDDLHMEEEKLSSLSKANLKLEQQVDELEGALEQE 1053
>Q8NZU7:IF2_STRP8 Translation initiation factor IF-2 - Streptococcus pyogenes serotype| M18 Length = 953 Score = 33.5 bits (75), Expect = 2.8 Identities = 25/108 (23%), Positives = 54/108 (50%), Gaps = 3/108 (2%) Frame = +2 Query: 176 AETRASVEEVAARILAIKKDGAPKSELRELVAQMSLLLITLRQVNREILMEEDKVKGETE 355 A+ + SVE +AA ++ I +G + + V ++ +TL + + +++ + Sbjct: 760 ADVQGSVEALAASLVKIDVEGVRVNVVHSAVGAINESDVTLAEASNAVIIGFNVRPTPQA 819 Query: 356 AAKAPVDSTTLRLHNLLYEKNHYV-KAIRSCLD--FQTKHPGIELVPE 490 +A D +RLH+++Y+ V +A++ LD +Q K G ++ E Sbjct: 820 RQQADTDDVEIRLHSIIYKVIEEVEEAMKGKLDPVYQEKILGEAIIRE 867
>Q03410:SYCP1_RAT Synaptonemal complex protein 1 - Rattus norvegicus (Rat)| Length = 997 Score = 32.7 bits (73), Expect = 4.8 Identities = 37/175 (21%), Positives = 75/175 (42%), Gaps = 21/175 (12%) Frame = +2 Query: 191 SVEEVAARILAIKKDGAPKSELREL----VAQMSLLLITLRQVNREIL-----------M 325 ++EE+ A+KK + +++ V ++ L L + +Q E++ + Sbjct: 636 NIEELHQENKALKKKSSAENKQLNAYEIKVNKLELELASTKQKFEEMINNYQKEIEIKKI 695 Query: 326 EEDKVKGETEAAKAPVDSTTLRLHNLLYEKNHYVKAIRSCLDFQTKHPGIELVPEEEFHR 505 E+K+ GE E AKA VD + H + + + ++ + KH ++V E + Sbjct: 696 SEEKLLGEVEKAKATVDEAVKLQKEIDLRCQHKIAEMVALME-KHKHQYDKIVEERDSEL 754 Query: 506 AAPADIRDKTLAADAAHDLMLKRLNFELVQRKELCERHE------KLEQQKNSLL 652 + + +A A + L + ELV K+ E + K+EQ+ ++L Sbjct: 755 GLYKNREQEQSSAKVALETELSNIRNELVSLKKQLEVEKEEKEKLKMEQENTAIL 809
>P0A3K7:IF2_STRAG Translation initiation factor IF-2 - Streptococcus agalactiae| Length = 927 Score = 32.7 bits (73), Expect = 4.8 Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 3/108 (2%) Frame = +2 Query: 176 AETRASVEEVAARILAIKKDGAPKSELRELVAQMSLLLITLRQVNREILMEEDKVKGETE 355 A+ + SVE +AA +L I +G + + V ++ +TL + + +++ + Sbjct: 734 ADVQGSVEALAASLLKIDVEGVKVNVVHSAVGAINESDVTLAEASNAVIIGFNVRPTPQA 793 Query: 356 AAKAPVDSTTLRLHNLLYEKNHYV-KAIRSCLD--FQTKHPGIELVPE 490 +A D +R H+++Y+ V +A++ LD +Q K G ++ E Sbjct: 794 RQQADADDVEIRQHSIIYKVIEEVEEAMKGKLDPEYQEKILGEAIIRE 841
>Q8E1H3:IF2_STRA5 Translation initiation factor IF-2 - Streptococcus agalactiae| serotype V Length = 927 Score = 32.7 bits (73), Expect = 4.8 Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 3/108 (2%) Frame = +2 Query: 176 AETRASVEEVAARILAIKKDGAPKSELRELVAQMSLLLITLRQVNREILMEEDKVKGETE 355 A+ + SVE +AA +L I +G + + V ++ +TL + + +++ + Sbjct: 734 ADVQGSVEALAASLLKIDVEGVKVNVVHSAVGAINESDVTLAEASNAVIIGFNVRPTPQA 793 Query: 356 AAKAPVDSTTLRLHNLLYEKNHYV-KAIRSCLD--FQTKHPGIELVPE 490 +A D +R H+++Y+ V +A++ LD +Q K G ++ E Sbjct: 794 RQQADADDVEIRQHSIIYKVIEEVEEAMKGKLDPEYQEKILGEAIIRE 841
>P0A3K6:IF2_STRA3 Translation initiation factor IF-2 - Streptococcus agalactiae| serotype III Length = 927 Score = 32.7 bits (73), Expect = 4.8 Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 3/108 (2%) Frame = +2 Query: 176 AETRASVEEVAARILAIKKDGAPKSELRELVAQMSLLLITLRQVNREILMEEDKVKGETE 355 A+ + SVE +AA +L I +G + + V ++ +TL + + +++ + Sbjct: 734 ADVQGSVEALAASLLKIDVEGVKVNVVHSAVGAINESDVTLAEASNAVIIGFNVRPTPQA 793 Query: 356 AAKAPVDSTTLRLHNLLYEKNHYV-KAIRSCLD--FQTKHPGIELVPE 490 +A D +R H+++Y+ V +A++ LD +Q K G ++ E Sbjct: 794 RQQADADDVEIRQHSIIYKVIEEVEEAMKGKLDPEYQEKILGEAIIRE 841
>Q3K302:IF2_STRA1 Translation initiation factor IF-2 - Streptococcus agalactiae| serotype Ia Length = 927 Score = 32.7 bits (73), Expect = 4.8 Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 3/108 (2%) Frame = +2 Query: 176 AETRASVEEVAARILAIKKDGAPKSELRELVAQMSLLLITLRQVNREILMEEDKVKGETE 355 A+ + SVE +AA +L I +G + + V ++ +TL + + +++ + Sbjct: 734 ADVQGSVEALAASLLKIDVEGVKVNVVHSAVGAINESDVTLAEASNAVIIGFNVRPTPQA 793 Query: 356 AAKAPVDSTTLRLHNLLYEKNHYV-KAIRSCLD--FQTKHPGIELVPE 490 +A D +R H+++Y+ V +A++ LD +Q K G ++ E Sbjct: 794 RQQADADDVEIRQHSIIYKVIEEVEEAMKGKLDPEYQEKILGEAIIRE 841
>P04461:MYH7_RABIT Myosin-7 - Oryctolagus cuniculus (Rabbit)| Length = 736 Score = 32.3 bits (72), Expect = 6.2 Identities = 33/142 (23%), Positives = 59/142 (41%) Frame = +2 Query: 245 KSELRELVAQMSLLLITLRQVNREILMEEDKVKGETEAAKAPVDSTTLRLHNLLYEKNHY 424 K +L V +M+ L ++N E+ ++ K++ E K +D L L + EK+ Sbjct: 476 KIQLEAKVKEMNERLEDEEEMNAELTAKKRKLEDECSELKRDIDDLELTLAKVEKEKHAT 535 Query: 425 VKAIRSCLDFQTKHPGIELVPEEEFHRAAPADIRDKTLAADAAHDLMLKRLNFELVQRKE 604 +++ + E+ +E A + K A AH L L E + Sbjct: 536 ENKVKNLTE--------EMAGLDEII----AKLTKKKKALQEAHQQALDDLQAEEDKVNT 583 Query: 605 LCERHEKLEQQKNSLLGTIANQ 670 L + KLEQQ + L G++ + Sbjct: 584 LTKAKVKLEQQVDDLEGSLEQE 605
>Q9BXF9:TEKT3_HUMAN Tektin-3 - Homo sapiens (Human)| Length = 490 Score = 32.0 bits (71), Expect = 8.1 Identities = 21/60 (35%), Positives = 30/60 (50%) Frame = +2 Query: 314 EILMEEDKVKGETEAAKAPVDSTTLRLHNLLYEKNHYVKAIRSCLDFQTKHPGIELVPEE 493 EI+ E D++ GET A + RL L E ++ R CL + K GI+LV +E Sbjct: 159 EIIHELDEMIGETNA----LTDVKKRLERALMETEAPLQVARECLFHREKRMGIDLVHDE 214
>Q60563:SYCP1_MESAU Synaptonemal complex protein 1 - Mesocricetus auratus (Golden| hamster) Length = 845 Score = 32.0 bits (71), Expect = 8.1 Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 6/116 (5%) Frame = +2 Query: 323 MEEDKVKGETEAAKAPVDSTTLRLHNLLYEKNHYVKAIRSCLDFQTKHPGIELVPEEEFH 502 + E+K+ GE E AKA VD + H + + + ++ + KH ++V E + Sbjct: 547 ISEEKLLGEVEKAKAMVDEAVKLQKEIDLRCQHKIAEMVALME-KHKHQYDKIVEERDSE 605 Query: 503 RAAPADIRDKTLAADAAHDLMLKRLNFELVQRKEL--CERHE----KLEQQKNSLL 652 + + L+ A + L + ELV K+ ER E KLE++ ++L Sbjct: 606 LGLCKNREQEQLSVKTALETELSNIRNELVSLKKQLEIEREEKEKLKLEKENTAIL 661
>Q96MF7:NSE2_HUMAN E3 SUMO-protein ligase NSE2 - Homo sapiens (Human)| Length = 247 Score = 32.0 bits (71), Expect = 8.1 Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 5/126 (3%) Frame = +2 Query: 248 SELRELVAQMSLLLITLRQVNREILMEEDKVKGETEAAKAPVDSTTLRLHNLLYEKNHYV 427 S L+ A ++ + T V +++ + +V E KA V+ TL + NHYV Sbjct: 25 SSLKNFQACINSGMDTASSVALDLVESQTEVSSEYSMDKAMVEFATLDR-----QLNHYV 79 Query: 428 KAIRSCLDF-----QTKHPGIELVPEEEFHRAAPADIRDKTLAADAAHDLMLKRLNFELV 592 KA++S ++ K P ++L+ E++F ++ K AD ++ + +L Sbjct: 80 KAVQSTINHVKEERPEKIPDLKLLVEKKF-----LALQSKNSDADFQNNEKFVQFKQQLK 134 Query: 593 QRKELC 610 + K+ C Sbjct: 135 ELKKQC 140
>Q6FPT7:DBP4_CANGA ATP-dependent RNA helicase DBP4 - Candida glabrata (Yeast)| (Torulopsis glabrata) Length = 765 Score = 32.0 bits (71), Expect = 8.1 Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Frame = +2 Query: 464 HPGIELVPEEEFHRAAPADIRDKTLAADAAHDLMLKRLNFELVQRKELCERHEK-LEQQK 640 HP EL EEEFH+ A+ + K + A + + ++ +++Q+++ E+ K LE + Sbjct: 616 HPVYELEGEEEFHKKGDAEEQKKEFLSKEAEIMADRDVSDKIIQKEKKQEKKRKRLEAMR 675 Query: 641 NSLLGTIANQ 670 + A++ Sbjct: 676 REMEAAYADE 685 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 242,789,088 Number of extensions: 4987498 Number of successful extensions: 14413 Number of sequences better than 10.0: 20 Number of HSP's gapped: 14401 Number of HSP's successfully gapped: 21 Length of query: 568 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 449 Effective length of database: 68,045,334 Effective search space: 30552354966 Effective search space used: 30552354966 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)