ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf61n17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os02g0743100:Os02g0743100 30 2.0
2AK108060:Os06g0233200 29 3.4
3AK100240:Os06g0167200 28 4.5
4Os11g0247800:Os11g0247800 28 7.6
5AK121979:Os04g0450400 28 7.6
6AK070565:Os02g0173500 27 9.9

>Os02g0743100:Os02g0743100 |
          Length = 396
 Score = 29.6 bits (65), Expect = 2.0
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -1

Query: 429 ED*KRIPPAAGRRFHV-VASVWLICSLNCCLCHSRSFIDSSSLGLGFFEF 283
           ED  R+ P  G  FH+     WL+ +  C LC    ++   ++    F+F
Sbjct: 162 EDRLRLLPVCGHAFHLHCIDTWLLSNSTCPLCRGTLYVPGLTIESLMFDF 211



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>AK108060:Os06g0233200 |
          Length = 436

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = -1

Query: 429 ED*KRIPPAAGRRFHV-VASVWLICSLNCCLCHSRSFIDSSSLGLGFFEF 283
           ED  R+ P  G  FH+     WL+ +  C LC    F+   +     F+F
Sbjct: 200 EDRLRLLPLCGHAFHLHCIDTWLLSNSTCPLCRGVLFVPGLTENNPMFDF 249



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>AK100240:Os06g0167200 |
          Length = 363

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -1

Query: 429 ED*KRIPPAAGRRFHV-VASVWLICSLNCCLCHSRSFIDSSSL 304
           +D  R+ P  G  FH+     WL+ +  C LC +    D+++L
Sbjct: 141 DDRLRLLPVCGHAFHIDCIDTWLLSNSTCPLCRAALGADAAAL 183



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>Os11g0247800:Os11g0247800 |
          Length = 1050

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = +3

Query: 486 ELVPFDVVGHSHI*FSPKHIEEYATLEIRDEM*RAYLSKGVDHLYGYDFPGTRFG 650
           EL P D+V    +    K IE++  ++IRD + R YLS+G     G+ +P    G
Sbjct: 270 ELNPADIVADPGL---RKPIEQFH-IDIRDAVRREYLSRGPCQPIGHKYPQKLMG 320



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>AK121979:Os04g0450400 |
          Length = 415

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -1

Query: 417 RIPPAAGRRFHVVA-SVWLICSLNCCLCHS 331
           R+ P  G  FHV     WL   +NC LC S
Sbjct: 216 RLLPKCGHAFHVPCIDTWLRAHVNCPLCRS 245



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>AK070565:Os02g0173500 |
          Length = 315

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 155 DSEGLQGDVLMLEVGPGGGATVGRCW*WIPVRMWIGWVY 271
           ++EG  GDV + + G GGGA  G      P+R++   +Y
Sbjct: 23  EAEGGDGDVEVADRGGGGGAANGGIPEGRPIRVYADGIY 61


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 17,121,851
Number of extensions: 342701
Number of successful extensions: 759
Number of sequences better than 10.0: 6
Number of HSP's gapped: 759
Number of HSP's successfully gapped: 6
Length of query: 229
Length of database: 15,399,855
Length adjustment: 97
Effective length of query: 132
Effective length of database: 11,515,878
Effective search space: 1520095896
Effective search space used: 1520095896
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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