ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf61n17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 48.1 bits (24), Expect = 0.042 Identities = 24/24 (100%) Strand = Plus / Plus Query: 71 tgctgctgctgctgcaggttgggc 94 |||||||||||||||||||||||| Sbjct: 2793899 tgctgctgctgctgcaggttgggc 2793922
>ref|NM_139493.2| Drosophila melanogaster CG2083-RA (CG2083), mRNA Length = 7187 Score = 48.1 bits (24), Expect = 0.042 Identities = 24/24 (100%) Strand = Plus / Minus Query: 71 tgctgctgctgctgcaggttgggc 94 |||||||||||||||||||||||| Sbjct: 1751 tgctgctgctgctgcaggttgggc 1728
>gb|AC010110.7| Drosophila melanogaster 3L BAC RP98-9N2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172372 Score = 48.1 bits (24), Expect = 0.042 Identities = 24/24 (100%) Strand = Plus / Plus Query: 71 tgctgctgctgctgcaggttgggc 94 |||||||||||||||||||||||| Sbjct: 142073 tgctgctgctgctgcaggttgggc 142096
>emb|AL672095.6| Mouse DNA sequence from clone RP23-387N22 on chromosome X, complete sequence Length = 165970 Score = 48.1 bits (24), Expect = 0.042 Identities = 24/24 (100%) Strand = Plus / Plus Query: 523 tttaatttagcccaaagcacattg 546 |||||||||||||||||||||||| Sbjct: 133707 tttaatttagcccaaagcacattg 133730
>gb|AC148878.2| Chlamydomonas reinhardtii clone cr-29B2, complete sequence Length = 64153 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 50 ggctgcggcggccggtgggggtgctgc 76 ||||||||||||| ||||||||||||| Sbjct: 24402 ggctgcggcggcctgtgggggtgctgc 24428
>ref|XM_503007.1| Yarrowia lipolytica CLIB122, YALI0D18898g predicted mRNA Length = 1758 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 63 ggtgggggtgctgctgctgctgc 85 ||||||||||||||||||||||| Sbjct: 397 ggtgggggtgctgctgctgctgc 375
>gb|AC158367.3| Gallus gallus BAC clone CH261-50N13 from chromosome unknown, complete sequence Length = 230079 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 69 ggtgctgctgctgctgcaggttg 91 ||||||||||||||||||||||| Sbjct: 102667 ggtgctgctgctgctgcaggttg 102689
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 63 ggtgggggtgctgctgctgctgc 85 ||||||||||||||||||||||| Sbjct: 2388013 ggtgggggtgctgctgctgctgc 2388035
>ref|XM_369551.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG05913.4) partial mRNA Length = 657 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 62 cggtgggggtgctgctgctgct 83 |||||||||||||||||||||| Sbjct: 319 cggtgggggtgctgctgctgct 298
>gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1764_D01, complete sequence Length = 164709 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Plus Query: 57 gcggccggtgggggtgctgctgctgctgca 86 ||||||||||||| |||||||||| ||||| Sbjct: 126292 gcggccggtggggttgctgctgctactgca 126321
>gb|BC042287.1| Xenopus laevis carbonic anhydrase II, mRNA (cDNA clone MGC:53534 IMAGE:5572784), complete cds Length = 1834 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 585 agggcatatttgtcaaaaggtg 606 |||||||||||||||||||||| Sbjct: 1013 agggcatatttgtcaaaaggtg 1034
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Plus Query: 568 ttagagatgaaatgtgaagggcatatttgt 597 ||||||||||| || ||||||||||||||| Sbjct: 20855054 ttagagatgaagtgagaagggcatatttgt 20855083 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ggtgctgctgctgctgcaggt 89 ||||||||||||||||||||| Sbjct: 108705 ggtgctgctgctgctgcaggt 108685
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Plus Query: 57 gcggccggtgggggtgctgctgctgctgca 86 ||||||||||||| |||||||||| ||||| Sbjct: 18958914 gcggccggtggggttgctgctgctactgca 18958943
>emb|BX321864.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 9/10 Length = 326050 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 223 gcgttgctggtgatggataccg 244 |||||||||||||||||||||| Sbjct: 182707 gcgttgctggtgatggataccg 182686
>dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0039D04 Length = 184408 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Plus Query: 568 ttagagatgaaatgtgaagggcatatttgt 597 ||||||||||| || ||||||||||||||| Sbjct: 65844 ttagagatgaagtgagaagggcatatttgt 65873
>gb|AC010980.8| Homo sapiens BAC clone RP11-384O8 from 2, complete sequence Length = 171374 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 ggtgggggtgctgctgctgctg 84 |||||||||||||||||||||| Sbjct: 6283 ggtgggggtgctgctgctgctg 6262
>dbj|D00402.1|STMSI Streptomyces albogriseolus gene for putative subtilisin inhibitor precursor, complete cds Length = 1792 Score = 44.1 bits (22), Expect = 0.65 Identities = 34/38 (89%) Strand = Plus / Minus Query: 50 ggctgcggcggccggtgggggtgctgctgctgctgcag 87 |||||| |||||||| ||||||||||||||| ||||| Sbjct: 1553 ggctgctgcggccgggcggggtgctgctgctggtgcag 1516
>emb|CT836111.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA103M23, full insert sequence Length = 1219 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ggtgctgctgctgctgcaggt 89 ||||||||||||||||||||| Sbjct: 405 ggtgctgctgctgctgcaggt 385
>dbj|AK237146.1| Sus scrofa mRNA, clone:SPL010004F03, expressed in spleen Length = 1419 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tgggggtgctgctgctgctgc 85 ||||||||||||||||||||| Sbjct: 129 tgggggtgctgctgctgctgc 149
>dbj|AK238194.1| Sus scrofa mRNA, clone:TCH010060E07, expressed in trachea Length = 1530 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tgggggtgctgctgctgctgc 85 ||||||||||||||||||||| Sbjct: 131 tgggggtgctgctgctgctgc 151
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tgggggtgctgctgctgctgc 85 ||||||||||||||||||||| Sbjct: 19466365 tgggggtgctgctgctgctgc 19466345
>gb|AC183691.3| Echinops telfairi clone CH238-284L8, complete sequence Length = 190334 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tgggggtgctgctgctgctgc 85 ||||||||||||||||||||| Sbjct: 90455 tgggggtgctgctgctgctgc 90435
>ref|NW_001509355.1| Eimeria tenella str. Houghton chromosome 1 emb|AM269894.1| Eimeria tenella chromosome 1, ordered contigs Length = 1347714 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 62 cggtgggggtgctgctgctgctgcaggtt 90 |||||| | |||||||||||||||||||| Sbjct: 596963 cggtggtgctgctgctgctgctgcaggtt 596935 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tgggggtgctgctgctgctgc 85 ||||||||||||||||||||| Sbjct: 677564 tgggggtgctgctgctgctgc 677584
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 gctgctgctgctgcaggttgg 92 ||||||||||||||||||||| Sbjct: 4097547 gctgctgctgctgcaggttgg 4097567
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 52 ctgcggcggccggtgggggtgctgctgctgctgcagg 88 ||||||| ||||||| || |||||| ||||||||||| Sbjct: 2838815 ctgcggcagccggtgcggatgctgcggctgctgcagg 2838779
>ref|XM_500458.1| Yarrowia lipolytica CLIB122, YALI0B03366g predicted mRNA Length = 585 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 296 ccgaggccgaggctgctgctgtcga 320 |||||||||||| |||||||||||| Sbjct: 317 ccgaggccgagggtgctgctgtcga 341
>gb|AC136754.4| Mus musculus chromosome 1, clone RP23-176K16, complete sequence Length = 212071 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tgggggtgctgctgctgctgc 85 ||||||||||||||||||||| Sbjct: 180329 tgggggtgctgctgctgctgc 180349
>ref|XM_540526.1| PREDICTED: Canis familiaris similar to Interferon regulatory factor 7 (IRF-7) (LOC483406), mRNA Length = 855 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 gaggccgaggctgctgctgtc 318 ||||||||||||||||||||| Sbjct: 783 gaggccgaggctgctgctgtc 763
>gb|AY325814.1| Drosophila melanogaster traffic jam mRNA, complete cds Length = 3183 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tgggggtgctgctgctgctgc 85 ||||||||||||||||||||| Sbjct: 1786 tgggggtgctgctgctgctgc 1766
>gb|AC121861.3| Mus musculus BAC clone RP24-108P23 from chromosome 1, complete sequence Length = 185558 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tgggggtgctgctgctgctgc 85 ||||||||||||||||||||| Sbjct: 110087 tgggggtgctgctgctgctgc 110067
>emb|AL451015.1|NCB13O20 Neurospora crassa DNA linkage group V BAC clone B13O20 Length = 65076 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 tgggggtgctgctgctgctgcaggt 89 ||||| ||||||||||||||||||| Sbjct: 26167 tggggctgctgctgctgctgcaggt 26191
>ref|XM_756445.1| Ustilago maydis 521 hypothetical protein (UM05391.1) partial mRNA Length = 1758 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 63 ggtgggggtgctgctgctgctgcag 87 ||||| ||||||||||||||||||| Sbjct: 52 ggtggtggtgctgctgctgctgcag 28
>emb|CR545462.25| Zebrafish DNA sequence from clone DKEYP-88F5 in linkage group 20, complete sequence Length = 199482 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ggtgctgctgctgctgcaggt 89 ||||||||||||||||||||| Sbjct: 89170 ggtgctgctgctgctgcaggt 89150
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 2.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 565 aaattagagatgaaatgtgaagggcatatttgt 597 |||||||||||||| || | ||||||||||||| Sbjct: 1238596 aaattagagatgaagtgaggagggcatatttgt 1238628
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 agtcttcttgcatctttcctt 443 ||||||||||||||||||||| Sbjct: 212849 agtcttcttgcatctttcctt 212869
>emb|AL158046.12| Human DNA sequence from clone RP5-1092K5 on chromosome 10 Contains part of the gene for a novel protein (KIAA1617) and a cytochrome c oxidase subunit VIc (COX6) pseudogene, complete sequence Length = 119265 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ggtgctgctgctgctgcaggt 89 ||||||||||||||||||||| Sbjct: 81294 ggtgctgctgctgctgcaggt 81314
>ref|XM_689837.1| PREDICTED: Danio rerio similar to Sterile alpha motif domain containing protein 4 (LOC566561), mRNA Length = 999 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ggccggtgggggtgctgctgctgct 83 ||||||| ||||||||||||||||| Sbjct: 706 ggccggtcggggtgctgctgctgct 682
>emb|AL049593.10|HSDJ654A7 Human DNA sequence from clone RP4-654A7 on chromosome 20 Contains the 3' end of two variants of the PLCB1 gene for phospholipase C beta 1 (phosphoinositide-specific), complete sequence Length = 71257 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 433 catctttcctttgatatgtta 453 ||||||||||||||||||||| Sbjct: 70199 catctttcctttgatatgtta 70179
>gb|AC099017.1| Drosophila melanogaster, chromosome 2L, region 37D-37E, BAC clone BACR27M12, complete sequence Length = 157766 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tgggggtgctgctgctgctgc 85 ||||||||||||||||||||| Sbjct: 53324 tgggggtgctgctgctgctgc 53304
>emb|BX063465.1|CNS09L4T Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC45BB04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 936 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tgggggtgctgctgctgctgc 85 ||||||||||||||||||||| Sbjct: 392 tgggggtgctgctgctgctgc 412
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 ccgaggccgaggctgctgctg 316 ||||||||||||||||||||| Sbjct: 712193 ccgaggccgaggctgctgctg 712213
>emb|BX511039.1|UMPLOC Ustilago maydis p-locus on chromosome 19 Length = 24500 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 ggtgggggtgctgctgctgctgcag 87 ||||| ||||||||||||||||||| Sbjct: 5296 ggtggtggtgctgctgctgctgcag 5320
>emb|AL807371.1|NC5F3 Neurospora crassa DNA linkage group V cosmid contig 5F3 Length = 83192 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tgggggtgctgctgctgctgc 85 ||||||||||||||||||||| Sbjct: 4175 tgggggtgctgctgctgctgc 4155
>emb|AJ245903.1|GGA245903 Gallus gallus partial mRNA for putative NK receptor (b-NK gene) Length = 703 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tgggggtgctgctgctgctgc 85 ||||||||||||||||||||| Sbjct: 132 tgggggtgctgctgctgctgc 152
>ref|NM_001044682.1| Gallus gallus putative NK receptor (B-NK), mRNA emb|AJ634338.1| Gallus gallus mRNA for NK receptor (B-NK gene), B12 allele, clone 160.3B Length = 678 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tgggggtgctgctgctgctgc 85 ||||||||||||||||||||| Sbjct: 104 tgggggtgctgctgctgctgc 124
>gb|AC007082.5|AC007082 Drosophila melanogaster, chromosome 2L, region 37D, BAC clone BACR28G24, complete sequence Length = 171375 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tgggggtgctgctgctgctgc 85 ||||||||||||||||||||| Sbjct: 159516 tgggggtgctgctgctgctgc 159496
>dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1203H11 Length = 156561 Score = 42.1 bits (21), Expect = 2.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 565 aaattagagatgaaatgtgaagggcatatttgt 597 |||||||||||||| || | ||||||||||||| Sbjct: 151833 aaattagagatgaagtgaggagggcatatttgt 151865
>dbj|AP005730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0073J19 Length = 165174 Score = 42.1 bits (21), Expect = 2.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 565 aaattagagatgaaatgtgaagggcatatttgt 597 |||||||||||||| || | ||||||||||||| Sbjct: 67903 aaattagagatgaagtgaggagggcatatttgt 67935
>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1026C12 Length = 170240 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ggtgctgctgctgctgcaggt 89 ||||||||||||||||||||| Sbjct: 108004 ggtgctgctgctgctgcaggt 107984
>gb|AC138656.1| Homo sapiens BAC clone RP11-421F20 from 4, complete sequence Length = 57169 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 618 tatggttatgattttcctggt 638 ||||||||||||||||||||| Sbjct: 23990 tatggttatgattttcctggt 24010
>dbj|AP006617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091F23 Length = 147699 Score = 42.1 bits (21), Expect = 2.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 565 aaattagagatgaaatgtgaagggcatatttgt 597 |||||||||||||| || | ||||||||||||| Sbjct: 105675 aaattagagatgaagtgaggagggcatatttgt 105707
>ref|XM_956050.1| Neurospora crassa OR74A hypothetical protein (NCU04183.1) partial mRNA Length = 135 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 tgggggtgctgctgctgctgcaggt 89 ||||| ||||||||||||||||||| Sbjct: 2 tggggctgctgctgctgctgcaggt 26
>ref|XM_954082.1| Neurospora crassa OR74A hypothetical protein (NCU04632.1) partial mRNA Length = 2682 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tgggggtgctgctgctgctgc 85 ||||||||||||||||||||| Sbjct: 522 tgggggtgctgctgctgctgc 542
>gb|AC023593.14| Homo sapiens 3 BAC RP11-427I6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 189757 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tgggggtgctgctgctgctgc 85 ||||||||||||||||||||| Sbjct: 6782 tgggggtgctgctgctgctgc 6802
>emb|AL118557.5|CNS01DRT Human chromosome 14 DNA sequence BAC R-1033H12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 214175 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tgggggtgctgctgctgctgc 85 ||||||||||||||||||||| Sbjct: 184944 tgggggtgctgctgctgctgc 184924
>emb|AL023516.3|GGBLOCUS Gallus gallus (chicken) DNA sequence from a contig of cosmids cB12, c4.5 and cBF23. Contains two Butyrophilin like genes, a gene coding for two isoforms of a B locus G (Zipper protein) like protein, genes coding for B locus Lectin like Natural Killer cell surface protein, C type Lectin, TAP Binding Protein (Tapasin) like protein, L Beta chain 1 and 2, M Alpha chain 1, B Beta chain 1 and 2, F Alpha chain 1 and 2, Transport Associated Proteins TAP1 and 2 and complement C4, a Histone H3 like gene, a Leu-tRNA gene and the RING3 kinase gene Length = 92863 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tgggggtgctgctgctgctgc 85 ||||||||||||||||||||| Sbjct: 27653 tgggggtgctgctgctgctgc 27633
>gb|AC005428.1|AC005428 Drosophila melanogaster DNA sequence (P1 DS05231 (D342)), complete sequence Length = 87835 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tgggggtgctgctgctgctgc 85 ||||||||||||||||||||| Sbjct: 62971 tgggggtgctgctgctgctgc 62991
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 296 ccgaggccgaggctgctgctgtcga 320 |||||||||||| |||||||||||| Sbjct: 481406 ccgaggccgagggtgctgctgtcga 481382
>dbj|AB057677.1| Oryzias latipes GnRH-R1 gene for gonadotropin-releasing hormone receptor 1, complete cds Length = 7185 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 ggtgggggtgctgctgctgct 83 ||||||||||||||||||||| Sbjct: 33 ggtgggggtgctgctgctgct 53
>dbj|AB057675.1| Oryzias latipes GnRH-R1 mRNA for gonadotropin-releasing hormone receptor 1, complete cds Length = 2755 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 ggtgggggtgctgctgctgct 83 ||||||||||||||||||||| Sbjct: 33 ggtgggggtgctgctgctgct 53 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 120,448,924 Number of extensions: 8039636 Number of successful extensions: 397222 Number of sequences better than 10.0: 60 Number of HSP's gapped: 397219 Number of HSP's successfully gapped: 62 Length of query: 687 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 665 Effective length of database: 18,508,616,841 Effective search space: 12308230199265 Effective search space used: 12308230199265 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
