ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf61m23 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT829500.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA014M21, full insert sequence Length = 2742 Score = 1136 bits (573), Expect = 0.0 Identities = 1340/1595 (84%), Gaps = 3/1595 (0%) Strand = Plus / Plus Query: 931 atgaggttgcgctttcttgcttcagagaaacgccgaccggatcagttcactgttcttgta 990 ||||| ||||| |||||||||||||||||||| ||||| || ||||| || |||||||| Sbjct: 784 atgagattgcggtttcttgcttcagagaaacggcgaccagaccagtttacagttcttgtg 843 Query: 991 cggaacataccaccagaccctgatgaatcagttagcgagcttgtggaacatttcttcctt 1050 ||||| ||||| ||||| |||||||||||| |||| ||||| ||||| |||||||||||| Sbjct: 844 cggaatatacctccagatcctgatgaatcaattagtgagctcgtggagcatttcttcctt 903 Query: 1051 gtcaatcatcctgatcattatctgaaacatcagacagtttacaatgcaaataagcttgct 1110 || |||||||||||||||||||| | ||| ||| ||||||||||||||||| |||||| Sbjct: 904 gttaatcatcctgatcattatctaagacaccaggtggtttacaatgcaaataaacttgct 963 Query: 1111 gacctggttgaaaagaagaagaaaatgcggaattggcttgattactaccaaaacaagctt 1170 || |||||||| |||||||||||| ||| |||||||||||||||||||| |||| | Sbjct: 964 gatctggttgagaagaagaagaaactgcaaaattggcttgattactaccagctcaagtat 1023 Query: 1171 gagcgaaa---atccaaaaggccaacaactaagactggctttcttggatgttttggttct 1227 || |||| ||| |||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 1024 gaaagaaatccatcaaaaaggcccaccactaagactggctttcttggctgttttggttcc 1083 Query: 1228 gaagtggatgctattgatcactgcaaatcagagattgagaagataggaaaggaagaagtt 1287 || |||||||| ||||| ||| |||| |||||||||||||||| || || ||||||| | Sbjct: 1084 gaggtggatgccattgaatactacaaagcagagattgagaagattgggaaagaagaagct 1143 Query: 1288 gaagagcgtaaaaaggtcatgaaggatcccaagtcaattatgccagcagcctttgtttct 1347 || |||||| ||||| |||||||||||||| ||||| | | ||||||||||||||||| Sbjct: 1144 gatgagcgtcaaaagatcatgaaggatccccagtcagctgttccagcagcctttgtttca 1203 Query: 1348 tttcgttcacggtggggtgcagctgtttgtgctcagacacaacaaacaagcaacccaacc 1407 ||||||||||||||||| || |||||||||||||||||||| ||||| || || ||||| Sbjct: 1204 tttcgttcacggtggggggctgctgtttgtgctcagacacagcaaaccagtaatccaaca 1263 Query: 1408 ctttggctgactgaatgggctccagaacctcgtgatgtctactggagtaatctatctatt 1467 | ||| | ||||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 1264 gtctggataactgaatgggctccagaacctcgtgatgtctactggaataatctatccatt 1323 Query: 1468 ccctttgtctccctgacggtcaggaggttgataattggcgtggccttcttcttcctcaac 1527 || ||||| ||||| || || |||||| ||||| ||| ||||| ||||||||||||||| Sbjct: 1324 ccatttgtgtccctcacagttaggaggctgatagttgctgtggcattcttcttcctcaac 1383 Query: 1528 ttcttctatgtcattccaatagcattcgtacagactcttgcaaatcttgaaggcatagag 1587 || || ||||||||||||||||||||||| || ||||||||| |||||||| ||||| Sbjct: 1384 tttttttatgtcattccaatagcattcgtgcaatctcttgcaagccttgaaggaatagaa 1443 Query: 1588 aaggcactaccatttctaaaacctttaattgaagcagataccattaaatcattcatccaa 1647 ||||| || |||||||| ||||| ||||| || ||| ||| ||||||||||||||| Sbjct: 1444 aaggcgcttccatttctgaaacccttaatcaaaattgatgtcatcaaatcattcatccaa 1503 Query: 1648 gggtttcttcctggacttgctctgaagatcttcctcatagtgcttccaactatactgatg 1707 || |||||||| ||| ||||| ||||| ||||||| ||| |||||||||||||||||||| Sbjct: 1504 ggttttcttccaggaattgctttgaaggtcttccttatattgcttccaactatactgatg 1563 Query: 1708 ttcatgtcacagtttgaaggattgatatcacagtcatcactagagcgaagaactgcgtcc 1767 || ||||| ||||||||||||| ||||||||||||||||| ||||||||| |||| || Sbjct: 1564 tttatgtctaagtttgaaggattaatatcacagtcatcactggagcgaagatctgcatct 1623 Query: 1768 aagtattttatattcttgttcttcaatgtatttttggggagcattgttacaggatctgct 1827 || |||| ||| |||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 1624 aaatattatatcttcttgttcttcaatgtatttttgggaagcatcgttacaggatctgct 1683 Query: 1828 ttggagcagcttaatacctacctccatgcgtcagctaatgacataccaaggatcattggt 1887 || || |||||||| | ||| | ||| ||| || ||||| ||||| || | ||| ||| Sbjct: 1684 ttagatcagcttaaggcatacattcatcagtcggcaaatgaaataccgagaaccatcggt 1743 Query: 1888 gtagccataccaatgaaggcaacatttttcataacatacgtaatggtcgatggttggact 1947 |||||||| ||||||| ||| || |||||||||||||| |||||||| || ||||||||| Sbjct: 1744 gtagccattccaatgagggcgacttttttcataacatatgtaatggttgacggttggact 1803 Query: 1948 ggtgtagctcttgaaatactgagaataagggcatttgtactataccacttgaaaaacttt 2007 ||||||||| ||||||| ||||| | |||||| || || | | ||| |||||||||||| Sbjct: 1804 ggtgtagctggtgaaatattgagattgagggcacttataatcttccatttgaaaaacttt 1863 Query: 2008 ttcttggtcaagacggagaaggacagagaagaggcaatggatccgggcagtatctgtttt 2067 |||||||| ||||| || |||||||||||||||||||||||||| || |||||||||||| Sbjct: 1864 ttcttggtgaagactgaaaaggacagagaagaggcaatggatcctggtagtatctgtttt 1923 Query: 2068 tactggtctgagcctcgaatacagctatatttcttgcttggtcttgtgtatgctgcagtg 2127 | |||| ||| || || ||||||||||||||||| ||||| ||||| ||||||| ||| Sbjct: 1924 gattggtgtgaaccacgtatacagctatatttcttacttggccttgtctatgctgtggtg 1983 Query: 2128 acaccgctcttgctaccttttatactggtgttctttgcgttgggatacgttgtctaccgc 2187 |||||| | ||||| ||||| ||| |||| ||||| | | ||| ||| |||||||||||| Sbjct: 1984 acaccgttattgcttcctttcatattggtattcttcgggctggcatatgttgtctaccgc 2043 Query: 2188 catcagatcattaatgtctacaatcaacgatacgagagtggtgcgcagttctggcccaac 2247 || ||||| || |||||||||||||||| ||||||||||||||| ||||| ||||| | Sbjct: 2044 caccagataataaatgtctacaatcaacaatacgagagtggtgcacagttttggccgagt 2103 Query: 2248 gtgcatctacgcataatcgtagcctcgattgcatcgcagctgcttctccttgggctactg 2307 ||||| ||||||||| | || | ||| | ||| ||||| ||||| |||| || || Sbjct: 2104 gtgcacgggcgcataatcattgcattgatcgtatcacagctacttcttattggactgttg 2163 Query: 2308 agcacaaagggtttggaggaggcgacgccagttcttctcgttcttcccatactaaccttt 2367 || ||||| ||||| |||||| |||| ||||||||| | |||||||| | | || ||| Sbjct: 2164 agtacaaaaggtttcgaggagacgacaccagttcttgttgttcttcctgtgttgacgttt 2223 Query: 2368 tggttccacaagtactgcacgcaccggtacaaacctgcgttcgtgaggaacccgctgcag 2427 ||||| |||||||||||| | |||||| | ||||| || ||||||||||| || ||| Sbjct: 2224 tggttttacaagtactgcaagaaccggtttgagcctgcatttgtgaggaacccactacag 2283 Query: 2428 gaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaagtcg 2487 || ||||||||||| ||||| ||||| | || |||||||| | |||||| || || || Sbjct: 2284 gaagcgatgaggaaagacaccctggaacgggcaagggagccaaccttcgatctgaaagcg 2343 Query: 2488 tacctggcggactcgtacctgcacccggtgttcaa 2522 |||||||| | |||||||||||||||||||||| Sbjct: 2344 tacctggccaatgcgtacctgcacccggtgttcaa 2378 Score = 236 bits (119), Expect = 4e-58 Identities = 268/315 (85%), Gaps = 2/315 (0%) Strand = Plus / Plus Query: 589 tacttgaagttcttaagctggatgccggctgctctcaagatgcccgaggaggagttgatc 648 |||||||| || ||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 442 tacttgaaatttttaagttggatgccggctgctctcaagatgccagaggatgagttgatc 501 Query: 649 gagcatgcgggcctcgattccgttgtctatctacggatatacctcacaggactgaagata 708 | ||||| ||||| ||||||| ||||||||||||||||||||| ||||| | |||||| Sbjct: 502 aatcatgcaggccttgattccgctgtctatctacggatatacctaacagggatcaagata 561 Query: 709 tttgttccgattacgattcttgctttcgct-gttttggtccctgtgaactggaccaatga 767 || ||||| || | ||| | |||| |||| ||| || |||||||||||||||| ||||| Sbjct: 562 ttcgttccaatatcaattttagctt-cgcttgttctgttccctgtgaactggacaaatga 620 Query: 768 tacgctagaaggtttgaaggtagtccacagtgatattgacaaactttcaatatccaacat 827 || ||||| | ||||||||||||||||| | |||||||||||||||||||| ||||| Sbjct: 621 caccctagacagcatgaaggtagtccacagtaaaattgacaaactttcaatatcaaacat 680 Query: 828 accttatggatctaagaggtttattgctcacttggttacggcctatgtatttacattttg 887 ||||||||| || || |||||| || |||||||||||| ||| |||| | || ||||| Sbjct: 681 accttatgggtcaaacaggtttgttactcacttggttatggcttatgctgtcacgttttg 740 Query: 888 gacctgctatgtact 902 ||||||||||||||| Sbjct: 741 gacctgctatgtact 755 Score = 50.1 bits (25), Expect = 0.049 Identities = 64/77 (83%) Strand = Plus / Plus Query: 460 gctttcctacggctacagcccatcaacgacaggatcttcttcccgaaatggtacctcaag 519 ||||| ||||| |||||||||||||||| ||| | | ||| || ||||||||||||| Sbjct: 313 gcttttctacgattacagcccatcaacgatagggtttactttccaaaatggtacctcaga 372 Query: 520 ggaatgcgggacagccc 536 |||||| | |||||||| Sbjct: 373 ggaatgagagacagccc 389 Score = 50.1 bits (25), Expect = 0.049 Identities = 64/77 (83%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||||||| |||||||||| || || | ||| ||| |||| | |||||| Sbjct: 2427 ggaggaggtgatcgtgccgaccaagcgtcaatctcgccggaacactcccgcccagagcaa 2486 Query: 2628 gtacgacggctccgaca 2644 |||||| |||||||||| Sbjct: 2487 gtacgaaggctccgaca 2503
>ref|NM_001063043.1| Oryza sativa (japonica cultivar-group) Os05g0594700 (Os05g0594700) mRNA, complete cds Length = 2848 Score = 1136 bits (573), Expect = 0.0 Identities = 1340/1595 (84%), Gaps = 3/1595 (0%) Strand = Plus / Plus Query: 931 atgaggttgcgctttcttgcttcagagaaacgccgaccggatcagttcactgttcttgta 990 ||||| ||||| |||||||||||||||||||| ||||| || ||||| || |||||||| Sbjct: 778 atgagattgcggtttcttgcttcagagaaacggcgaccagaccagtttacagttcttgtg 837 Query: 991 cggaacataccaccagaccctgatgaatcagttagcgagcttgtggaacatttcttcctt 1050 ||||| ||||| ||||| |||||||||||| |||| ||||| ||||| |||||||||||| Sbjct: 838 cggaatatacctccagatcctgatgaatcaattagtgagctcgtggagcatttcttcctt 897 Query: 1051 gtcaatcatcctgatcattatctgaaacatcagacagtttacaatgcaaataagcttgct 1110 || |||||||||||||||||||| | ||| ||| ||||||||||||||||| |||||| Sbjct: 898 gttaatcatcctgatcattatctaagacaccaggtggtttacaatgcaaataaacttgct 957 Query: 1111 gacctggttgaaaagaagaagaaaatgcggaattggcttgattactaccaaaacaagctt 1170 || |||||||| |||||||||||| ||| |||||||||||||||||||| |||| | Sbjct: 958 gatctggttgagaagaagaagaaactgcaaaattggcttgattactaccagctcaagtat 1017 Query: 1171 gagcgaaa---atccaaaaggccaacaactaagactggctttcttggatgttttggttct 1227 || |||| ||| |||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 1018 gaaagaaatccatcaaaaaggcccaccactaagactggctttcttggctgttttggttcc 1077 Query: 1228 gaagtggatgctattgatcactgcaaatcagagattgagaagataggaaaggaagaagtt 1287 || |||||||| ||||| ||| |||| |||||||||||||||| || || ||||||| | Sbjct: 1078 gaggtggatgccattgaatactacaaagcagagattgagaagattgggaaagaagaagct 1137 Query: 1288 gaagagcgtaaaaaggtcatgaaggatcccaagtcaattatgccagcagcctttgtttct 1347 || |||||| ||||| |||||||||||||| ||||| | | ||||||||||||||||| Sbjct: 1138 gatgagcgtcaaaagatcatgaaggatccccagtcagctgttccagcagcctttgtttca 1197 Query: 1348 tttcgttcacggtggggtgcagctgtttgtgctcagacacaacaaacaagcaacccaacc 1407 ||||||||||||||||| || |||||||||||||||||||| ||||| || || ||||| Sbjct: 1198 tttcgttcacggtggggggctgctgtttgtgctcagacacagcaaaccagtaatccaaca 1257 Query: 1408 ctttggctgactgaatgggctccagaacctcgtgatgtctactggagtaatctatctatt 1467 | ||| | ||||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 1258 gtctggataactgaatgggctccagaacctcgtgatgtctactggaataatctatccatt 1317 Query: 1468 ccctttgtctccctgacggtcaggaggttgataattggcgtggccttcttcttcctcaac 1527 || ||||| ||||| || || |||||| ||||| ||| ||||| ||||||||||||||| Sbjct: 1318 ccatttgtgtccctcacagttaggaggctgatagttgctgtggcattcttcttcctcaac 1377 Query: 1528 ttcttctatgtcattccaatagcattcgtacagactcttgcaaatcttgaaggcatagag 1587 || || ||||||||||||||||||||||| || ||||||||| |||||||| ||||| Sbjct: 1378 tttttttatgtcattccaatagcattcgtgcaatctcttgcaagccttgaaggaatagaa 1437 Query: 1588 aaggcactaccatttctaaaacctttaattgaagcagataccattaaatcattcatccaa 1647 ||||| || |||||||| ||||| ||||| || ||| ||| ||||||||||||||| Sbjct: 1438 aaggcgcttccatttctgaaacccttaatcaaaattgatgtcatcaaatcattcatccaa 1497 Query: 1648 gggtttcttcctggacttgctctgaagatcttcctcatagtgcttccaactatactgatg 1707 || |||||||| ||| ||||| ||||| ||||||| ||| |||||||||||||||||||| Sbjct: 1498 ggttttcttccaggaattgctttgaaggtcttccttatattgcttccaactatactgatg 1557 Query: 1708 ttcatgtcacagtttgaaggattgatatcacagtcatcactagagcgaagaactgcgtcc 1767 || ||||| ||||||||||||| ||||||||||||||||| ||||||||| |||| || Sbjct: 1558 tttatgtctaagtttgaaggattaatatcacagtcatcactggagcgaagatctgcatct 1617 Query: 1768 aagtattttatattcttgttcttcaatgtatttttggggagcattgttacaggatctgct 1827 || |||| ||| |||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 1618 aaatattatatcttcttgttcttcaatgtatttttgggaagcatcgttacaggatctgct 1677 Query: 1828 ttggagcagcttaatacctacctccatgcgtcagctaatgacataccaaggatcattggt 1887 || || |||||||| | ||| | ||| ||| || ||||| ||||| || | ||| ||| Sbjct: 1678 ttagatcagcttaaggcatacattcatcagtcggcaaatgaaataccgagaaccatcggt 1737 Query: 1888 gtagccataccaatgaaggcaacatttttcataacatacgtaatggtcgatggttggact 1947 |||||||| ||||||| ||| || |||||||||||||| |||||||| || ||||||||| Sbjct: 1738 gtagccattccaatgagggcgacttttttcataacatatgtaatggttgacggttggact 1797 Query: 1948 ggtgtagctcttgaaatactgagaataagggcatttgtactataccacttgaaaaacttt 2007 ||||||||| ||||||| ||||| | |||||| || || | | ||| |||||||||||| Sbjct: 1798 ggtgtagctggtgaaatattgagattgagggcacttataatcttccatttgaaaaacttt 1857 Query: 2008 ttcttggtcaagacggagaaggacagagaagaggcaatggatccgggcagtatctgtttt 2067 |||||||| ||||| || |||||||||||||||||||||||||| || |||||||||||| Sbjct: 1858 ttcttggtgaagactgaaaaggacagagaagaggcaatggatcctggtagtatctgtttt 1917 Query: 2068 tactggtctgagcctcgaatacagctatatttcttgcttggtcttgtgtatgctgcagtg 2127 | |||| ||| || || ||||||||||||||||| ||||| ||||| ||||||| ||| Sbjct: 1918 gattggtgtgaaccacgtatacagctatatttcttacttggccttgtctatgctgtggtg 1977 Query: 2128 acaccgctcttgctaccttttatactggtgttctttgcgttgggatacgttgtctaccgc 2187 |||||| | ||||| ||||| ||| |||| ||||| | | ||| ||| |||||||||||| Sbjct: 1978 acaccgttattgcttcctttcatattggtattcttcgggctggcatatgttgtctaccgc 2037 Query: 2188 catcagatcattaatgtctacaatcaacgatacgagagtggtgcgcagttctggcccaac 2247 || ||||| || |||||||||||||||| ||||||||||||||| ||||| ||||| | Sbjct: 2038 caccagataataaatgtctacaatcaacaatacgagagtggtgcacagttttggccgagt 2097 Query: 2248 gtgcatctacgcataatcgtagcctcgattgcatcgcagctgcttctccttgggctactg 2307 ||||| ||||||||| | || | ||| | ||| ||||| ||||| |||| || || Sbjct: 2098 gtgcacgggcgcataatcattgcattgatcgtatcacagctacttcttattggactgttg 2157 Query: 2308 agcacaaagggtttggaggaggcgacgccagttcttctcgttcttcccatactaaccttt 2367 || ||||| ||||| |||||| |||| ||||||||| | |||||||| | | || ||| Sbjct: 2158 agtacaaaaggtttcgaggagacgacaccagttcttgttgttcttcctgtgttgacgttt 2217 Query: 2368 tggttccacaagtactgcacgcaccggtacaaacctgcgttcgtgaggaacccgctgcag 2427 ||||| |||||||||||| | |||||| | ||||| || ||||||||||| || ||| Sbjct: 2218 tggttttacaagtactgcaagaaccggtttgagcctgcatttgtgaggaacccactacag 2277 Query: 2428 gaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaagtcg 2487 || ||||||||||| ||||| ||||| | || |||||||| | |||||| || || || Sbjct: 2278 gaagcgatgaggaaagacaccctggaacgggcaagggagccaaccttcgatctgaaagcg 2337 Query: 2488 tacctggcggactcgtacctgcacccggtgttcaa 2522 |||||||| | |||||||||||||||||||||| Sbjct: 2338 tacctggccaatgcgtacctgcacccggtgttcaa 2372 Score = 236 bits (119), Expect = 4e-58 Identities = 268/315 (85%), Gaps = 2/315 (0%) Strand = Plus / Plus Query: 589 tacttgaagttcttaagctggatgccggctgctctcaagatgcccgaggaggagttgatc 648 |||||||| || ||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 436 tacttgaaatttttaagttggatgccggctgctctcaagatgccagaggatgagttgatc 495 Query: 649 gagcatgcgggcctcgattccgttgtctatctacggatatacctcacaggactgaagata 708 | ||||| ||||| ||||||| ||||||||||||||||||||| ||||| | |||||| Sbjct: 496 aatcatgcaggccttgattccgctgtctatctacggatatacctaacagggatcaagata 555 Query: 709 tttgttccgattacgattcttgctttcgct-gttttggtccctgtgaactggaccaatga 767 || ||||| || | ||| | |||| |||| ||| || |||||||||||||||| ||||| Sbjct: 556 ttcgttccaatatcaattttagctt-cgcttgttctgttccctgtgaactggacaaatga 614 Query: 768 tacgctagaaggtttgaaggtagtccacagtgatattgacaaactttcaatatccaacat 827 || ||||| | ||||||||||||||||| | |||||||||||||||||||| ||||| Sbjct: 615 caccctagacagcatgaaggtagtccacagtaaaattgacaaactttcaatatcaaacat 674 Query: 828 accttatggatctaagaggtttattgctcacttggttacggcctatgtatttacattttg 887 ||||||||| || || |||||| || |||||||||||| ||| |||| | || ||||| Sbjct: 675 accttatgggtcaaacaggtttgttactcacttggttatggcttatgctgtcacgttttg 734 Query: 888 gacctgctatgtact 902 ||||||||||||||| Sbjct: 735 gacctgctatgtact 749 Score = 50.1 bits (25), Expect = 0.049 Identities = 64/77 (83%) Strand = Plus / Plus Query: 460 gctttcctacggctacagcccatcaacgacaggatcttcttcccgaaatggtacctcaag 519 ||||| ||||| |||||||||||||||| ||| | | ||| || ||||||||||||| Sbjct: 307 gcttttctacgattacagcccatcaacgatagggtttactttccaaaatggtacctcaga 366 Query: 520 ggaatgcgggacagccc 536 |||||| | |||||||| Sbjct: 367 ggaatgagagacagccc 383 Score = 50.1 bits (25), Expect = 0.049 Identities = 64/77 (83%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||||||| |||||||||| || || | ||| ||| |||| | |||||| Sbjct: 2421 ggaggaggtgatcgtgccgaccaagcgtcaatctcgccggaacactcccgcccagagcaa 2480 Query: 2628 gtacgacggctccgaca 2644 |||||| |||||||||| Sbjct: 2481 gtacgaaggctccgaca 2497
>dbj|AK073648.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M19, full insert sequence Length = 2681 Score = 1136 bits (573), Expect = 0.0 Identities = 1340/1595 (84%), Gaps = 3/1595 (0%) Strand = Plus / Plus Query: 931 atgaggttgcgctttcttgcttcagagaaacgccgaccggatcagttcactgttcttgta 990 ||||| ||||| |||||||||||||||||||| ||||| || ||||| || |||||||| Sbjct: 724 atgagattgcggtttcttgcttcagagaaacggcgaccagaccagtttacagttcttgtg 783 Query: 991 cggaacataccaccagaccctgatgaatcagttagcgagcttgtggaacatttcttcctt 1050 ||||| ||||| ||||| |||||||||||| |||| ||||| ||||| |||||||||||| Sbjct: 784 cggaatatacctccagatcctgatgaatcaattagtgagctcgtggagcatttcttcctt 843 Query: 1051 gtcaatcatcctgatcattatctgaaacatcagacagtttacaatgcaaataagcttgct 1110 || |||||||||||||||||||| | ||| ||| ||||||||||||||||| |||||| Sbjct: 844 gttaatcatcctgatcattatctaagacaccaggtggtttacaatgcaaataaacttgct 903 Query: 1111 gacctggttgaaaagaagaagaaaatgcggaattggcttgattactaccaaaacaagctt 1170 || |||||||| |||||||||||| ||| |||||||||||||||||||| |||| | Sbjct: 904 gatctggttgagaagaagaagaaactgcaaaattggcttgattactaccagctcaagtat 963 Query: 1171 gagcgaaa---atccaaaaggccaacaactaagactggctttcttggatgttttggttct 1227 || |||| ||| |||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 964 gaaagaaatccatcaaaaaggcccaccactaagactggctttcttggctgttttggttcc 1023 Query: 1228 gaagtggatgctattgatcactgcaaatcagagattgagaagataggaaaggaagaagtt 1287 || |||||||| ||||| ||| |||| |||||||||||||||| || || ||||||| | Sbjct: 1024 gaggtggatgccattgaatactacaaagcagagattgagaagattgggaaagaagaagct 1083 Query: 1288 gaagagcgtaaaaaggtcatgaaggatcccaagtcaattatgccagcagcctttgtttct 1347 || |||||| ||||| |||||||||||||| ||||| | | ||||||||||||||||| Sbjct: 1084 gatgagcgtcaaaagatcatgaaggatccccagtcagctgttccagcagcctttgtttca 1143 Query: 1348 tttcgttcacggtggggtgcagctgtttgtgctcagacacaacaaacaagcaacccaacc 1407 ||||||||||||||||| || |||||||||||||||||||| ||||| || || ||||| Sbjct: 1144 tttcgttcacggtggggggctgctgtttgtgctcagacacagcaaaccagtaatccaaca 1203 Query: 1408 ctttggctgactgaatgggctccagaacctcgtgatgtctactggagtaatctatctatt 1467 | ||| | ||||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 1204 gtctggataactgaatgggctccagaacctcgtgatgtctactggaataatctatccatt 1263 Query: 1468 ccctttgtctccctgacggtcaggaggttgataattggcgtggccttcttcttcctcaac 1527 || ||||| ||||| || || |||||| ||||| ||| ||||| ||||||||||||||| Sbjct: 1264 ccatttgtgtccctcacagttaggaggctgatagttgctgtggcattcttcttcctcaac 1323 Query: 1528 ttcttctatgtcattccaatagcattcgtacagactcttgcaaatcttgaaggcatagag 1587 || || ||||||||||||||||||||||| || ||||||||| |||||||| ||||| Sbjct: 1324 tttttttatgtcattccaatagcattcgtgcaatctcttgcaagccttgaaggaatagaa 1383 Query: 1588 aaggcactaccatttctaaaacctttaattgaagcagataccattaaatcattcatccaa 1647 ||||| || |||||||| ||||| ||||| || ||| ||| ||||||||||||||| Sbjct: 1384 aaggcgcttccatttctgaaacccttaatcaaaattgatgtcatcaaatcattcatccaa 1443 Query: 1648 gggtttcttcctggacttgctctgaagatcttcctcatagtgcttccaactatactgatg 1707 || |||||||| ||| ||||| ||||| ||||||| ||| |||||||||||||||||||| Sbjct: 1444 ggttttcttccaggaattgctttgaaggtcttccttatattgcttccaactatactgatg 1503 Query: 1708 ttcatgtcacagtttgaaggattgatatcacagtcatcactagagcgaagaactgcgtcc 1767 || ||||| ||||||||||||| ||||||||||||||||| ||||||||| |||| || Sbjct: 1504 tttatgtctaagtttgaaggattaatatcacagtcatcactggagcgaagatctgcatct 1563 Query: 1768 aagtattttatattcttgttcttcaatgtatttttggggagcattgttacaggatctgct 1827 || |||| ||| |||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 1564 aaatattatatcttcttgttcttcaatgtatttttgggaagcatcgttacaggatctgct 1623 Query: 1828 ttggagcagcttaatacctacctccatgcgtcagctaatgacataccaaggatcattggt 1887 || || |||||||| | ||| | ||| ||| || ||||| ||||| || | ||| ||| Sbjct: 1624 ttagatcagcttaaggcatacattcatcagtcggcaaatgaaataccgagaaccatcggt 1683 Query: 1888 gtagccataccaatgaaggcaacatttttcataacatacgtaatggtcgatggttggact 1947 |||||||| ||||||| ||| || |||||||||||||| |||||||| || ||||||||| Sbjct: 1684 gtagccattccaatgagggcgacttttttcataacatatgtaatggttgacggttggact 1743 Query: 1948 ggtgtagctcttgaaatactgagaataagggcatttgtactataccacttgaaaaacttt 2007 ||||||||| ||||||| ||||| | |||||| || || | | ||| |||||||||||| Sbjct: 1744 ggtgtagctggtgaaatattgagattgagggcacttataatcttccatttgaaaaacttt 1803 Query: 2008 ttcttggtcaagacggagaaggacagagaagaggcaatggatccgggcagtatctgtttt 2067 |||||||| ||||| || |||||||||||||||||||||||||| || |||||||||||| Sbjct: 1804 ttcttggtgaagactgaaaaggacagagaagaggcaatggatcctggtagtatctgtttt 1863 Query: 2068 tactggtctgagcctcgaatacagctatatttcttgcttggtcttgtgtatgctgcagtg 2127 | |||| ||| || || ||||||||||||||||| ||||| ||||| ||||||| ||| Sbjct: 1864 gattggtgtgaaccacgtatacagctatatttcttacttggccttgtctatgctgtggtg 1923 Query: 2128 acaccgctcttgctaccttttatactggtgttctttgcgttgggatacgttgtctaccgc 2187 |||||| | ||||| ||||| ||| |||| ||||| | | ||| ||| |||||||||||| Sbjct: 1924 acaccgttattgcttcctttcatattggtattcttcgggctggcatatgttgtctaccgc 1983 Query: 2188 catcagatcattaatgtctacaatcaacgatacgagagtggtgcgcagttctggcccaac 2247 || ||||| || |||||||||||||||| ||||||||||||||| ||||| ||||| | Sbjct: 1984 caccagataataaatgtctacaatcaacaatacgagagtggtgcacagttttggccgagt 2043 Query: 2248 gtgcatctacgcataatcgtagcctcgattgcatcgcagctgcttctccttgggctactg 2307 ||||| ||||||||| | || | ||| | ||| ||||| ||||| |||| || || Sbjct: 2044 gtgcacgggcgcataatcattgcattgatcgtatcacagctacttcttattggactgttg 2103 Query: 2308 agcacaaagggtttggaggaggcgacgccagttcttctcgttcttcccatactaaccttt 2367 || ||||| ||||| |||||| |||| ||||||||| | |||||||| | | || ||| Sbjct: 2104 agtacaaaaggtttcgaggagacgacaccagttcttgttgttcttcctgtgttgacgttt 2163 Query: 2368 tggttccacaagtactgcacgcaccggtacaaacctgcgttcgtgaggaacccgctgcag 2427 ||||| |||||||||||| | |||||| | ||||| || ||||||||||| || ||| Sbjct: 2164 tggttttacaagtactgcaagaaccggtttgagcctgcatttgtgaggaacccactacag 2223 Query: 2428 gaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaagtcg 2487 || ||||||||||| ||||| ||||| | || |||||||| | |||||| || || || Sbjct: 2224 gaagcgatgaggaaagacaccctggaacgggcaagggagccaaccttcgatctgaaagcg 2283 Query: 2488 tacctggcggactcgtacctgcacccggtgttcaa 2522 |||||||| | |||||||||||||||||||||| Sbjct: 2284 tacctggccaatgcgtacctgcacccggtgttcaa 2318 Score = 236 bits (119), Expect = 4e-58 Identities = 268/315 (85%), Gaps = 2/315 (0%) Strand = Plus / Plus Query: 589 tacttgaagttcttaagctggatgccggctgctctcaagatgcccgaggaggagttgatc 648 |||||||| || ||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 382 tacttgaaatttttaagttggatgccggctgctctcaagatgccagaggatgagttgatc 441 Query: 649 gagcatgcgggcctcgattccgttgtctatctacggatatacctcacaggactgaagata 708 | ||||| ||||| ||||||| ||||||||||||||||||||| ||||| | |||||| Sbjct: 442 aatcatgcaggccttgattccgctgtctatctacggatatacctaacagggatcaagata 501 Query: 709 tttgttccgattacgattcttgctttcgct-gttttggtccctgtgaactggaccaatga 767 || ||||| || | ||| | |||| |||| ||| || |||||||||||||||| ||||| Sbjct: 502 ttcgttccaatatcaattttagctt-cgcttgttctgttccctgtgaactggacaaatga 560 Query: 768 tacgctagaaggtttgaaggtagtccacagtgatattgacaaactttcaatatccaacat 827 || ||||| | ||||||||||||||||| | |||||||||||||||||||| ||||| Sbjct: 561 caccctagacagcatgaaggtagtccacagtaaaattgacaaactttcaatatcaaacat 620 Query: 828 accttatggatctaagaggtttattgctcacttggttacggcctatgtatttacattttg 887 ||||||||| || || |||||| || |||||||||||| ||| |||| | || ||||| Sbjct: 621 accttatgggtcaaacaggtttgttactcacttggttatggcttatgctgtcacgttttg 680 Query: 888 gacctgctatgtact 902 ||||||||||||||| Sbjct: 681 gacctgctatgtact 695 Score = 50.1 bits (25), Expect = 0.049 Identities = 64/77 (83%) Strand = Plus / Plus Query: 460 gctttcctacggctacagcccatcaacgacaggatcttcttcccgaaatggtacctcaag 519 ||||| ||||| |||||||||||||||| ||| | | ||| || ||||||||||||| Sbjct: 253 gcttttctacgattacagcccatcaacgatagggtttactttccaaaatggtacctcaga 312 Query: 520 ggaatgcgggacagccc 536 |||||| | |||||||| Sbjct: 313 ggaatgagagacagccc 329 Score = 50.1 bits (25), Expect = 0.049 Identities = 64/77 (83%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||||||| |||||||||| || || | ||| ||| |||| | |||||| Sbjct: 2367 ggaggaggtgatcgtgccgaccaagcgtcaatctcgccggaacactcccgcccagagcaa 2426 Query: 2628 gtacgacggctccgaca 2644 |||||| |||||||||| Sbjct: 2427 gtacgaaggctccgaca 2443
>dbj|AK067992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122B14, full insert sequence Length = 2850 Score = 1136 bits (573), Expect = 0.0 Identities = 1340/1595 (84%), Gaps = 3/1595 (0%) Strand = Plus / Plus Query: 931 atgaggttgcgctttcttgcttcagagaaacgccgaccggatcagttcactgttcttgta 990 ||||| ||||| |||||||||||||||||||| ||||| || ||||| || |||||||| Sbjct: 779 atgagattgcggtttcttgcttcagagaaacggcgaccagaccagtttacagttcttgtg 838 Query: 991 cggaacataccaccagaccctgatgaatcagttagcgagcttgtggaacatttcttcctt 1050 ||||| ||||| ||||| |||||||||||| |||| ||||| ||||| |||||||||||| Sbjct: 839 cggaatatacctccagatcctgatgaatcaattagtgagctcgtggagcatttcttcctt 898 Query: 1051 gtcaatcatcctgatcattatctgaaacatcagacagtttacaatgcaaataagcttgct 1110 || |||||||||||||||||||| | ||| ||| ||||||||||||||||| |||||| Sbjct: 899 gttaatcatcctgatcattatctaagacaccaggtggtttacaatgcaaataaacttgct 958 Query: 1111 gacctggttgaaaagaagaagaaaatgcggaattggcttgattactaccaaaacaagctt 1170 || |||||||| |||||||||||| ||| |||||||||||||||||||| |||| | Sbjct: 959 gatctggttgagaagaagaagaaactgcaaaattggcttgattactaccagctcaagtat 1018 Query: 1171 gagcgaaa---atccaaaaggccaacaactaagactggctttcttggatgttttggttct 1227 || |||| ||| |||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 1019 gaaagaaatccatcaaaaaggcccaccactaagactggctttcttggctgttttggttcc 1078 Query: 1228 gaagtggatgctattgatcactgcaaatcagagattgagaagataggaaaggaagaagtt 1287 || |||||||| ||||| ||| |||| |||||||||||||||| || || ||||||| | Sbjct: 1079 gaggtggatgccattgaatactacaaagcagagattgagaagattgggaaagaagaagct 1138 Query: 1288 gaagagcgtaaaaaggtcatgaaggatcccaagtcaattatgccagcagcctttgtttct 1347 || |||||| ||||| |||||||||||||| ||||| | | ||||||||||||||||| Sbjct: 1139 gatgagcgtcaaaagatcatgaaggatccccagtcagctgttccagcagcctttgtttca 1198 Query: 1348 tttcgttcacggtggggtgcagctgtttgtgctcagacacaacaaacaagcaacccaacc 1407 ||||||||||||||||| || |||||||||||||||||||| ||||| || || ||||| Sbjct: 1199 tttcgttcacggtggggggctgctgtttgtgctcagacacagcaaaccagtaatccaaca 1258 Query: 1408 ctttggctgactgaatgggctccagaacctcgtgatgtctactggagtaatctatctatt 1467 | ||| | ||||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 1259 gtctggataactgaatgggctccagaacctcgtgatgtctactggaataatctatccatt 1318 Query: 1468 ccctttgtctccctgacggtcaggaggttgataattggcgtggccttcttcttcctcaac 1527 || ||||| ||||| || || |||||| ||||| ||| ||||| ||||||||||||||| Sbjct: 1319 ccatttgtgtccctcacagttaggaggctgatagttgctgtggcattcttcttcctcaac 1378 Query: 1528 ttcttctatgtcattccaatagcattcgtacagactcttgcaaatcttgaaggcatagag 1587 || || ||||||||||||||||||||||| || ||||||||| |||||||| ||||| Sbjct: 1379 tttttttatgtcattccaatagcattcgtgcaatctcttgcaagccttgaaggaatagaa 1438 Query: 1588 aaggcactaccatttctaaaacctttaattgaagcagataccattaaatcattcatccaa 1647 ||||| || |||||||| ||||| ||||| || ||| ||| ||||||||||||||| Sbjct: 1439 aaggcgcttccatttctgaaacccttaatcaaaattgatgtcatcaaatcattcatccaa 1498 Query: 1648 gggtttcttcctggacttgctctgaagatcttcctcatagtgcttccaactatactgatg 1707 || |||||||| ||| ||||| ||||| ||||||| ||| |||||||||||||||||||| Sbjct: 1499 ggttttcttccaggaattgctttgaaggtcttccttatattgcttccaactatactgatg 1558 Query: 1708 ttcatgtcacagtttgaaggattgatatcacagtcatcactagagcgaagaactgcgtcc 1767 || ||||| ||||||||||||| ||||||||||||||||| ||||||||| |||| || Sbjct: 1559 tttatgtctaagtttgaaggattaatatcacagtcatcactggagcgaagatctgcatct 1618 Query: 1768 aagtattttatattcttgttcttcaatgtatttttggggagcattgttacaggatctgct 1827 || |||| ||| |||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 1619 aaatattatatcttcttgttcttcaatgtatttttgggaagcatcgttacaggatctgct 1678 Query: 1828 ttggagcagcttaatacctacctccatgcgtcagctaatgacataccaaggatcattggt 1887 || || |||||||| | ||| | ||| ||| || ||||| ||||| || | ||| ||| Sbjct: 1679 ttagatcagcttaaggcatacattcatcagtcggcaaatgaaataccgagaaccatcggt 1738 Query: 1888 gtagccataccaatgaaggcaacatttttcataacatacgtaatggtcgatggttggact 1947 |||||||| ||||||| ||| || |||||||||||||| |||||||| || ||||||||| Sbjct: 1739 gtagccattccaatgagggcgacttttttcataacatatgtaatggttgacggttggact 1798 Query: 1948 ggtgtagctcttgaaatactgagaataagggcatttgtactataccacttgaaaaacttt 2007 ||||||||| ||||||| ||||| | |||||| || || | | ||| |||||||||||| Sbjct: 1799 ggtgtagctggtgaaatattgagattgagggcacttataatcttccatttgaaaaacttt 1858 Query: 2008 ttcttggtcaagacggagaaggacagagaagaggcaatggatccgggcagtatctgtttt 2067 |||||||| ||||| || |||||||||||||||||||||||||| || |||||||||||| Sbjct: 1859 ttcttggtgaagactgaaaaggacagagaagaggcaatggatcctggtagtatctgtttt 1918 Query: 2068 tactggtctgagcctcgaatacagctatatttcttgcttggtcttgtgtatgctgcagtg 2127 | |||| ||| || || ||||||||||||||||| ||||| ||||| ||||||| ||| Sbjct: 1919 gattggtgtgaaccacgtatacagctatatttcttacttggccttgtctatgctgtggtg 1978 Query: 2128 acaccgctcttgctaccttttatactggtgttctttgcgttgggatacgttgtctaccgc 2187 |||||| | ||||| ||||| ||| |||| ||||| | | ||| ||| |||||||||||| Sbjct: 1979 acaccgttattgcttcctttcatattggtattcttcgggctggcatatgttgtctaccgc 2038 Query: 2188 catcagatcattaatgtctacaatcaacgatacgagagtggtgcgcagttctggcccaac 2247 || ||||| || |||||||||||||||| ||||||||||||||| ||||| ||||| | Sbjct: 2039 caccagataataaatgtctacaatcaacaatacgagagtggtgcacagttttggccgagt 2098 Query: 2248 gtgcatctacgcataatcgtagcctcgattgcatcgcagctgcttctccttgggctactg 2307 ||||| ||||||||| | || | ||| | ||| ||||| ||||| |||| || || Sbjct: 2099 gtgcacgggcgcataatcattgcattgatcgtatcacagctacttcttattggactgttg 2158 Query: 2308 agcacaaagggtttggaggaggcgacgccagttcttctcgttcttcccatactaaccttt 2367 || ||||| ||||| |||||| |||| ||||||||| | |||||||| | | || ||| Sbjct: 2159 agtacaaaaggtttcgaggagacgacaccagttcttgttgttcttcctgtgttgacgttt 2218 Query: 2368 tggttccacaagtactgcacgcaccggtacaaacctgcgttcgtgaggaacccgctgcag 2427 ||||| |||||||||||| | |||||| | ||||| || ||||||||||| || ||| Sbjct: 2219 tggttttacaagtactgcaagaaccggtttgagcctgcatttgtgaggaacccactacag 2278 Query: 2428 gaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaagtcg 2487 || ||||||||||| ||||| ||||| | || |||||||| | |||||| || || || Sbjct: 2279 gaagcgatgaggaaagacaccctggaacgggcaagggagccaaccttcgatctgaaagcg 2338 Query: 2488 tacctggcggactcgtacctgcacccggtgttcaa 2522 |||||||| | |||||||||||||||||||||| Sbjct: 2339 tacctggccaatgcgtacctgcacccggtgttcaa 2373 Score = 236 bits (119), Expect = 4e-58 Identities = 268/315 (85%), Gaps = 2/315 (0%) Strand = Plus / Plus Query: 589 tacttgaagttcttaagctggatgccggctgctctcaagatgcccgaggaggagttgatc 648 |||||||| || ||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 437 tacttgaaatttttaagttggatgccggctgctctcaagatgccagaggatgagttgatc 496 Query: 649 gagcatgcgggcctcgattccgttgtctatctacggatatacctcacaggactgaagata 708 | ||||| ||||| ||||||| ||||||||||||||||||||| ||||| | |||||| Sbjct: 497 aatcatgcaggccttgattccgctgtctatctacggatatacctaacagggatcaagata 556 Query: 709 tttgttccgattacgattcttgctttcgct-gttttggtccctgtgaactggaccaatga 767 || ||||| || | ||| | |||| |||| ||| || |||||||||||||||| ||||| Sbjct: 557 ttcgttccaatatcaattttagctt-cgcttgttctgttccctgtgaactggacaaatga 615 Query: 768 tacgctagaaggtttgaaggtagtccacagtgatattgacaaactttcaatatccaacat 827 || ||||| | ||||||||||||||||| | |||||||||||||||||||| ||||| Sbjct: 616 caccctagacagcatgaaggtagtccacagtaaaattgacaaactttcaatatcaaacat 675 Query: 828 accttatggatctaagaggtttattgctcacttggttacggcctatgtatttacattttg 887 ||||||||| || || |||||| || |||||||||||| ||| |||| | || ||||| Sbjct: 676 accttatgggtcaaacaggtttgttactcacttggttatggcttatgctgtcacgttttg 735 Query: 888 gacctgctatgtact 902 ||||||||||||||| Sbjct: 736 gacctgctatgtact 750 Score = 50.1 bits (25), Expect = 0.049 Identities = 64/77 (83%) Strand = Plus / Plus Query: 460 gctttcctacggctacagcccatcaacgacaggatcttcttcccgaaatggtacctcaag 519 ||||| ||||| |||||||||||||||| ||| | | ||| || ||||||||||||| Sbjct: 308 gcttttctacgattacagcccatcaacgatagggtttactttccaaaatggtacctcaga 367 Query: 520 ggaatgcgggacagccc 536 |||||| | |||||||| Sbjct: 368 ggaatgagagacagccc 384 Score = 50.1 bits (25), Expect = 0.049 Identities = 64/77 (83%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||||||| |||||||||| || || | ||| ||| |||| | |||||| Sbjct: 2422 ggaggaggtgatcgtgccgaccaagcgtcaatctcgccggaacactcccgcccagagcaa 2481 Query: 2628 gtacgacggctccgaca 2644 |||||| |||||||||| Sbjct: 2482 gtacgaaggctccgaca 2498
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 729 bits (368), Expect = 0.0 Identities = 368/368 (100%) Strand = Plus / Minus Query: 331 caggccgtgttctctgtcaacttgacttgttaagctatctgaaggaggacagccatggct 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2952 caggccgtgttctctgtcaacttgacttgttaagctatctgaaggaggacagccatggct 2893 Query: 391 accatctatgacattggcctcggggcggggttcaacatattgatggcgaccatcttcctg 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2892 accatctatgacattggcctcggggcggggttcaacatattgatggcgaccatcttcctg 2833 Query: 451 ctcatattcgctttcctacggctacagcccatcaacgacaggatcttcttcccgaaatgg 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2832 ctcatattcgctttcctacggctacagcccatcaacgacaggatcttcttcccgaaatgg 2773 Query: 511 tacctcaagggaatgcgggacagcccgtcctccgccggcgccgctgtcaccaagtatgtc 570 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2772 tacctcaagggaatgcgggacagcccgtcctccgccggcgccgctgtcaccaagtatgtc 2713 Query: 571 aacctgaacgtgaggtcctacttgaagttcttaagctggatgccggctgctctcaagatg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2712 aacctgaacgtgaggtcctacttgaagttcttaagctggatgccggctgctctcaagatg 2653 Query: 631 cccgaggaggagttgatcgagcatgcgggcctcgattccgttgtctatctacggatatac 690 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2652 cccgaggaggagttgatcgagcatgcgggcctcgattccgttgtctatctacggatatac 2593 Query: 691 ctcacagg 698 |||||||| Sbjct: 2592 ctcacagg 2585 Score = 507 bits (256), Expect = e-140 Identities = 306/320 (95%), Gaps = 7/320 (2%) Strand = Plus / Minus Query: 2 actagctcagcccaagccgaggcgaccgttgcgctccggactccatccatatctcttctt 61 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4718 actagctcagcccaagccgaggcgaccgttgcgctccggactctatccatatctcttctt 4659 Query: 62 cctccctttcccttttaaaacggaagcagagctccccccgtcccgtccagatactgttac 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4658 cctccctttcccttttaaaacggaagcagagctccccccgtcccgtccagatactgttgc 4599 Query: 122 cagcacaaggaaggaagga----aggagttggagaggggagggcgtccaatccgggctgc 177 ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 4598 cagcacaaggaaggaaggaaggaaggagttggagaggggagggcgtcgaatccgggctgc 4539 Query: 178 cccgccgccacgccgcgcttgcc-cggacaccaatccaggaagcaagcaatcaagcaagc 236 ||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||| Sbjct: 4538 cccgccgccacgccgcgcttgccacgaaaaccaatccaggaagcaagcaatcaagcaagc 4479 Query: 237 aggggaggactgttaccccccaccctgggcgaggccacctc--cccccaccaggaggaag 294 ||||||||||||||||||||||||||||||||||||||| | || |||||||||||||| Sbjct: 4478 aggggaggactgttaccccccaccctgggcgaggccaccaccaccaccaccaggaggaag 4419 Query: 295 gaacacgccgccgccgccga 314 |||||||||||||||||||| Sbjct: 4418 gaacacgccgccgccgccga 4399 Score = 297 bits (150), Expect = 1e-76 Identities = 150/150 (100%) Strand = Plus / Minus Query: 698 gactgaagatatttgttccgattacgattcttgctttcgctgttttggtccctgtgaact 757 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2045 gactgaagatatttgttccgattacgattcttgctttcgctgttttggtccctgtgaact 1986 Query: 758 ggaccaatgatacgctagaaggtttgaaggtagtccacagtgatattgacaaactttcaa 817 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1985 ggaccaatgatacgctagaaggtttgaaggtagtccacagtgatattgacaaactttcaa 1926 Query: 818 tatccaacataccttatggatctaagaggt 847 |||||||||||||||||||||||||||||| Sbjct: 1925 tatccaacataccttatggatctaagaggt 1896 Score = 270 bits (136), Expect = 3e-68 Identities = 139/140 (99%) Strand = Plus / Minus Query: 844 aggtttattgctcacttggttacggcctatgtatttacattttggacctgctatgtactt 903 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1166 aggtttattgctcacttggttatggcctatgtatttacattttggacctgctatgtactt 1107 Query: 904 aagaatgagtatgaaagagtcgcgactatgaggttgcgctttcttgcttcagagaaacgc 963 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1106 aagaatgagtatgaaagagtcgcgactatgaggttgcgctttcttgcttcagagaaacgc 1047 Query: 964 cgaccggatcagttcactgt 983 |||||||||||||||||||| Sbjct: 1046 cgaccggatcagttcactgt 1027 Score = 202 bits (102), Expect = 6e-48 Identities = 102/102 (100%) Strand = Plus / Minus Query: 982 gttcttgtacggaacataccaccagaccctgatgaatcagttagcgagcttgtggaacat 1041 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 gttcttgtacggaacataccaccagaccctgatgaatcagttagcgagcttgtggaacat 522 Query: 1042 ttcttccttgtcaatcatcctgatcattatctgaaacatcag 1083 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 ttcttccttgtcaatcatcctgatcattatctgaaacatcag 480 Score = 52.0 bits (26), Expect = 0.013 Identities = 26/26 (100%) Strand = Plus / Minus Query: 1082 agacagtttacaatgcaaataagctt 1107 |||||||||||||||||||||||||| Sbjct: 26 agacagtttacaatgcaaataagctt 1
>ref|NM_001049791.1| Oryza sativa (japonica cultivar-group) Os01g0534900 (Os01g0534900) mRNA, complete cds Length = 2858 Score = 406 bits (205), Expect = e-109 Identities = 763/949 (80%) Strand = Plus / Plus Query: 1184 aaaggccaacaactaagactggctttcttggatgttttggttctgaagtggatgctattg 1243 ||||||| || || |||||||| |||||||||||||||||||| | ||||||||||||| Sbjct: 1218 aaaggcctactacaaagactggttttcttggatgttttggttcaaaggtggatgctattg 1277 Query: 1244 atcactgcaaatcagagattgagaagataggaaaggaagaagttgaagagcgtaaaaagg 1303 | ||| || ||| || ||||||| ||||| |||||||||| ||| || ||| |||| Sbjct: 1278 aatactacacatctgaaattgagaggatagaaaaggaagaaactgatgaacgtggaaaga 1337 Query: 1304 tcatgaaggatcccaagtcaattatgccagcagcctttgtttcttttcgttcacggtggg 1363 | ||||||||||| || ||| || ||||||||||||||||||| || || || ||||||| Sbjct: 1338 ttatgaaggatccaaaatcagttgtgccagcagcctttgtttccttccgatcgcggtggg 1397 Query: 1364 gtgcagctgtttgtgctcagacacaacaaacaagcaacccaaccctttggctgactgaat 1423 | ||||| || |||||||||||||| ||||| || || ||||| | ||| |||| || | Sbjct: 1398 gagcagcagtgtgtgctcagacacagcaaaccagtaatccaactgtctggttgaccgagt 1457 Query: 1424 gggctccagaacctcgtgatgtctactggagtaatctatctattccctttgtctccctga 1483 |||| |||||||||||||||||||| ||| ||| || |||||||| ||||| | ||||| Sbjct: 1458 gggccccagaacctcgtgatgtctattgggataacctctctattccttttgtttacctga 1517 Query: 1484 cggtcaggaggttgataattggcgtggccttcttcttcctcaacttcttctatgtcattc 1543 | | |||||| ||||||||| || || ||||||||||| |||||||| ||||| | | Sbjct: 1518 caattaggaggctgataattgcggttgcattcttcttcctgaacttcttttatgtgctcc 1577 Query: 1544 caatagcattcgtacagactcttgcaaatcttgaaggcatagagaaggcactaccatttc 1603 | || ||||| || ||| | ||||||||| ||||||| || ||||||||| ||||||| Sbjct: 1578 cgattgcatttgttcagtcccttgcaaatattgaagggattgagaaggcagctccatttc 1637 Query: 1604 taaaacctttaattgaagcagataccattaaatcattcatccaagggtttcttcctggac 1663 | || ||||| |||||| ||| |||||||||||||||||||| ||||| || ||| Sbjct: 1638 tgaagcctttgattgaaatgcgtactattaaatcattcatccaaggatttctgccaggaa 1697 Query: 1664 ttgctctgaagatcttcctcatagtgcttccaactatactgatgttcatgtcacagtttg 1723 ||||||||||||| ||||| ||| |||| || | ||| | ||||| ||||| | ||| Sbjct: 1698 ttgctctgaagattttccttatattgctccctagcatattaatgtttatgtctaaagttg 1757 Query: 1724 aaggattgatatcacagtcatcactagagcgaagaactgcgtccaagtattttatattct 1783 ||||||||| ||| ||| ||||| ||| | ||| |||| | ||||| | ||| |||| Sbjct: 1758 aaggattgacatcggtgtcctcactggagaggagatctgcttttaagtactatatcttct 1817 Query: 1784 tgttcttcaatgtatttttggggagcattgttacaggatctgctttggagcagcttaata 1843 ||||||| |||||||| ||||| |||||| || ||||||||||||| |||||||| || | Sbjct: 1818 tgttctttaatgtattcttgggaagcattattgcaggatctgctttagagcagctcaaaa 1877 Query: 1844 cctacctccatgcgtcagctaatgacataccaaggatcattggtgtagccataccaatga 1903 | | || || ||||| ||||| |||||||||| ||||||| ||| || ||||||| Sbjct: 1878 catttcttcaccaatcagcaaatgaaataccaaggacaattggtgaagcaattccaatga 1937 Query: 1904 aggcaacatttttcataacatacgtaatggtcgatggttggactggtgtagctcttgaaa 1963 | ||||| ||||| |||||||| |||||||| ||||||||| |||| |||||| ||||| Sbjct: 1938 aagcaaccttttttataacatatgtaatggttgatggttgggctggggtagctggtgaaa 1997 Query: 1964 tactgagaataagggcatttgtactataccacttgaaaaactttttcttggtcaagacgg 2023 | | ||| | | |||| || | | |||||||||||||||||||||||||||||| | Sbjct: 1998 ttttaagattgaaaccattgataatcttccacttgaaaaactttttcttggtcaagactg 2057 Query: 2024 agaaggacagagaagaggcaatggatccgggcagtatctgtttttactggtctgagcctc 2083 |||| ||||||||||| |||||||| || || || || ||||| ||| |||||||| Sbjct: 2058 agaaagacagagaagaagcaatggaccctggaagcattggttttgactcaaatgagcctc 2117 Query: 2084 gaatacagctatatttcttgcttggtcttgtgtatgctgcagtgacacc 2132 ||||||||| ||||||||||| || ||||| ||||||| |||||||| Sbjct: 2118 aaatacagctctatttcttgctcggacttgtctatgctgtggtgacacc 2166 Score = 167 bits (84), Expect = 3e-37 Identities = 186/220 (84%) Strand = Plus / Plus Query: 938 tgcgctttcttgcttcagagaaacgccgaccggatcagttcactgttcttgtacggaaca 997 ||||||||||||| |||||||| ||||| || ||||||||||| || ||||| ||||| | Sbjct: 969 tgcgctttcttgcatcagagaagcgccgcccagatcagttcacggtccttgtgcggaata 1028 Query: 998 taccaccagaccctgatgaatcagttagcgagcttgtggaacatttcttccttgtcaatc 1057 |||| || || |||||||||||| || | |||||||||||||||||||||||||| || | Sbjct: 1029 taccgcctgatcctgatgaatcaattggtgagcttgtggaacatttcttccttgtaaacc 1088 Query: 1058 atcctgatcattatctgaaacatcagacagtttacaatgcaaataagcttgctgacctgg 1117 ||||||| |||||||| | || ||| || || |||||||||||||||| | | ||| Sbjct: 1089 atcctgaccattatcttacgcaccaggttgtctataatgcaaataagcttgataagatgg 1148 Query: 1118 ttgaaaagaagaagaaaatgcggaattggcttgattacta 1157 | || ||||||||||||||| |||||||||||||||||| Sbjct: 1149 tcaaagagaagaagaaaatgcagaattggcttgattacta 1188 Score = 77.8 bits (39), Expect = 2e-10 Identities = 39/39 (100%) Strand = Plus / Plus Query: 793 cacagtgatattgacaaactttcaatatccaacatacct 831 ||||||||||||||||||||||||||||||||||||||| Sbjct: 824 cacagtgatattgacaaactttcaatatccaacatacct 862 Score = 67.9 bits (34), Expect = 2e-07 Identities = 82/98 (83%) Strand = Plus / Plus Query: 589 tacttgaagttcttaagctggatgccggctgctctcaagatgcccgaggaggagttgatc 648 ||||||||| ||||||| |||||||| ||||||||||| ||||| ||||| ||||| || Sbjct: 620 tacttgaaggtcttaagttggatgcctgctgctctcaaaatgccagaggatgagttaatt 679 Query: 649 gagcatgcgggcctcgattccgttgtctatctacggat 686 ||||| ||||| ||||| | ||||||||| ||||| Sbjct: 680 agccatgcaggccttgattcagctgtctatctgcggat 717 Score = 46.1 bits (23), Expect = 0.77 Identities = 50/59 (84%) Strand = Plus / Plus Query: 460 gctttcctacggctacagcccatcaacgacaggatcttcttcccgaaatggtacctcaa 518 |||||||| || ||||||||||||||||| ||| | | |||||| || ||||| ||||| Sbjct: 491 gctttcctgcgactacagcccatcaacgatagggtttacttcccaaagtggtatctcaa 549
>dbj|AK103608.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133I03, full insert sequence Length = 2859 Score = 406 bits (205), Expect = e-109 Identities = 763/949 (80%) Strand = Plus / Plus Query: 1184 aaaggccaacaactaagactggctttcttggatgttttggttctgaagtggatgctattg 1243 ||||||| || || |||||||| |||||||||||||||||||| | ||||||||||||| Sbjct: 1219 aaaggcctactacaaagactggttttcttggatgttttggttcaaaggtggatgctattg 1278 Query: 1244 atcactgcaaatcagagattgagaagataggaaaggaagaagttgaagagcgtaaaaagg 1303 | ||| || ||| || ||||||| ||||| |||||||||| ||| || ||| |||| Sbjct: 1279 aatactacacatctgaaattgagaggatagaaaaggaagaaactgatgaacgtggaaaga 1338 Query: 1304 tcatgaaggatcccaagtcaattatgccagcagcctttgtttcttttcgttcacggtggg 1363 | ||||||||||| || ||| || ||||||||||||||||||| || || || ||||||| Sbjct: 1339 ttatgaaggatccaaaatcagttgtgccagcagcctttgtttccttccgatcgcggtggg 1398 Query: 1364 gtgcagctgtttgtgctcagacacaacaaacaagcaacccaaccctttggctgactgaat 1423 | ||||| || |||||||||||||| ||||| || || ||||| | ||| |||| || | Sbjct: 1399 gagcagcagtgtgtgctcagacacagcaaaccagtaatccaactgtctggttgaccgagt 1458 Query: 1424 gggctccagaacctcgtgatgtctactggagtaatctatctattccctttgtctccctga 1483 |||| |||||||||||||||||||| ||| ||| || |||||||| ||||| | ||||| Sbjct: 1459 gggccccagaacctcgtgatgtctattgggataacctctctattccttttgtttacctga 1518 Query: 1484 cggtcaggaggttgataattggcgtggccttcttcttcctcaacttcttctatgtcattc 1543 | | |||||| ||||||||| || || ||||||||||| |||||||| ||||| | | Sbjct: 1519 caattaggaggctgataattgcggttgcattcttcttcctgaacttcttttatgtgctcc 1578 Query: 1544 caatagcattcgtacagactcttgcaaatcttgaaggcatagagaaggcactaccatttc 1603 | || ||||| || ||| | ||||||||| ||||||| || ||||||||| ||||||| Sbjct: 1579 cgattgcatttgttcagtcccttgcaaatattgaagggattgagaaggcagctccatttc 1638 Query: 1604 taaaacctttaattgaagcagataccattaaatcattcatccaagggtttcttcctggac 1663 | || ||||| |||||| ||| |||||||||||||||||||| ||||| || ||| Sbjct: 1639 tgaagcctttgattgaaatgcgtactattaaatcattcatccaaggatttctgccaggaa 1698 Query: 1664 ttgctctgaagatcttcctcatagtgcttccaactatactgatgttcatgtcacagtttg 1723 ||||||||||||| ||||| ||| |||| || | ||| | ||||| ||||| | ||| Sbjct: 1699 ttgctctgaagattttccttatattgctccctagcatattaatgtttatgtctaaagttg 1758 Query: 1724 aaggattgatatcacagtcatcactagagcgaagaactgcgtccaagtattttatattct 1783 ||||||||| ||| ||| ||||| ||| | ||| |||| | ||||| | ||| |||| Sbjct: 1759 aaggattgacatcggtgtcctcactggagaggagatctgcttttaagtactatatcttct 1818 Query: 1784 tgttcttcaatgtatttttggggagcattgttacaggatctgctttggagcagcttaata 1843 ||||||| |||||||| ||||| |||||| || ||||||||||||| |||||||| || | Sbjct: 1819 tgttctttaatgtattcttgggaagcattattgcaggatctgctttagagcagctcaaaa 1878 Query: 1844 cctacctccatgcgtcagctaatgacataccaaggatcattggtgtagccataccaatga 1903 | | || || ||||| ||||| |||||||||| ||||||| ||| || ||||||| Sbjct: 1879 catttcttcaccaatcagcaaatgaaataccaaggacaattggtgaagcaattccaatga 1938 Query: 1904 aggcaacatttttcataacatacgtaatggtcgatggttggactggtgtagctcttgaaa 1963 | ||||| ||||| |||||||| |||||||| ||||||||| |||| |||||| ||||| Sbjct: 1939 aagcaaccttttttataacatatgtaatggttgatggttgggctggggtagctggtgaaa 1998 Query: 1964 tactgagaataagggcatttgtactataccacttgaaaaactttttcttggtcaagacgg 2023 | | ||| | | |||| || | | |||||||||||||||||||||||||||||| | Sbjct: 1999 ttttaagattgaaaccattgataatcttccacttgaaaaactttttcttggtcaagactg 2058 Query: 2024 agaaggacagagaagaggcaatggatccgggcagtatctgtttttactggtctgagcctc 2083 |||| ||||||||||| |||||||| || || || || ||||| ||| |||||||| Sbjct: 2059 agaaagacagagaagaagcaatggaccctggaagcattggttttgactcaaatgagcctc 2118 Query: 2084 gaatacagctatatttcttgcttggtcttgtgtatgctgcagtgacacc 2132 ||||||||| ||||||||||| || ||||| ||||||| |||||||| Sbjct: 2119 aaatacagctctatttcttgctcggacttgtctatgctgtggtgacacc 2167 Score = 167 bits (84), Expect = 3e-37 Identities = 186/220 (84%) Strand = Plus / Plus Query: 938 tgcgctttcttgcttcagagaaacgccgaccggatcagttcactgttcttgtacggaaca 997 ||||||||||||| |||||||| ||||| || ||||||||||| || ||||| ||||| | Sbjct: 970 tgcgctttcttgcatcagagaagcgccgcccagatcagttcacggtccttgtgcggaata 1029 Query: 998 taccaccagaccctgatgaatcagttagcgagcttgtggaacatttcttccttgtcaatc 1057 |||| || || |||||||||||| || | |||||||||||||||||||||||||| || | Sbjct: 1030 taccgcctgatcctgatgaatcaattggtgagcttgtggaacatttcttccttgtaaacc 1089 Query: 1058 atcctgatcattatctgaaacatcagacagtttacaatgcaaataagcttgctgacctgg 1117 ||||||| |||||||| | || ||| || || |||||||||||||||| | | ||| Sbjct: 1090 atcctgaccattatcttacgcaccaggttgtctataatgcaaataagcttgataagatgg 1149 Query: 1118 ttgaaaagaagaagaaaatgcggaattggcttgattacta 1157 | || ||||||||||||||| |||||||||||||||||| Sbjct: 1150 tcaaagagaagaagaaaatgcagaattggcttgattacta 1189 Score = 77.8 bits (39), Expect = 2e-10 Identities = 39/39 (100%) Strand = Plus / Plus Query: 793 cacagtgatattgacaaactttcaatatccaacatacct 831 ||||||||||||||||||||||||||||||||||||||| Sbjct: 825 cacagtgatattgacaaactttcaatatccaacatacct 863 Score = 67.9 bits (34), Expect = 2e-07 Identities = 82/98 (83%) Strand = Plus / Plus Query: 589 tacttgaagttcttaagctggatgccggctgctctcaagatgcccgaggaggagttgatc 648 ||||||||| ||||||| |||||||| ||||||||||| ||||| ||||| ||||| || Sbjct: 621 tacttgaaggtcttaagttggatgcctgctgctctcaaaatgccagaggatgagttaatt 680 Query: 649 gagcatgcgggcctcgattccgttgtctatctacggat 686 ||||| ||||| ||||| | ||||||||| ||||| Sbjct: 681 agccatgcaggccttgattcagctgtctatctgcggat 718 Score = 46.1 bits (23), Expect = 0.77 Identities = 50/59 (84%) Strand = Plus / Plus Query: 460 gctttcctacggctacagcccatcaacgacaggatcttcttcccgaaatggtacctcaa 518 |||||||| || ||||||||||||||||| ||| | | |||||| || ||||| ||||| Sbjct: 492 gctttcctgcgactacagcccatcaacgatagggtttacttcccaaagtggtatctcaa 550
>gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0030I14, complete sequence Length = 159035 Score = 299 bits (151), Expect = 3e-77 Identities = 289/335 (86%) Strand = Plus / Plus Query: 1282 gaagttgaagagcgtaaaaaggtcatgaaggatcccaagtcaattatgccagcagccttt 1341 |||| ||| |||||| ||||| |||||||||||||| ||||| | | |||||||||||| Sbjct: 40603 gaagctgatgagcgtcaaaagatcatgaaggatccccagtcagctgttccagcagccttt 40662 Query: 1342 gtttcttttcgttcacggtggggtgcagctgtttgtgctcagacacaacaaacaagcaac 1401 ||||| ||||||||||||||||| || |||||||||||||||||||| ||||| || || Sbjct: 40663 gtttcatttcgttcacggtggggggctgctgtttgtgctcagacacagcaaaccagtaat 40722 Query: 1402 ccaaccctttggctgactgaatgggctccagaacctcgtgatgtctactggagtaatcta 1461 ||||| | ||| | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 40723 ccaacagtctggataactgaatgggctccagaacctcgtgatgtctactggaataatcta 40782 Query: 1462 tctattccctttgtctccctgacggtcaggaggttgataattggcgtggccttcttcttc 1521 || ||||| ||||| ||||| || || |||||| ||||| ||| ||||| ||||||||| Sbjct: 40783 tccattccatttgtgtccctcacagttaggaggctgatagttgctgtggcattcttcttc 40842 Query: 1522 ctcaacttcttctatgtcattccaatagcattcgtacagactcttgcaaatcttgaaggc 1581 |||||||| || ||||||||||||||||||||||| || ||||||||| |||||||| Sbjct: 40843 ctcaactttttttatgtcattccaatagcattcgtgcaatctcttgcaagccttgaagga 40902 Query: 1582 atagagaaggcactaccatttctaaaacctttaat 1616 ||||| ||||| || |||||||| ||||| ||||| Sbjct: 40903 atagaaaaggcgcttccatttctgaaacccttaat 40937 Score = 248 bits (125), Expect = 1e-61 Identities = 260/305 (85%) Strand = Plus / Plus Query: 1885 ggtgtagccataccaatgaaggcaacatttttcataacatacgtaatggtcgatggttgg 1944 ||||||||||| ||||||| ||| || |||||||||||||| |||||||| || |||||| Sbjct: 42236 ggtgtagccattccaatgagggcgacttttttcataacatatgtaatggttgacggttgg 42295 Query: 1945 actggtgtagctcttgaaatactgagaataagggcatttgtactataccacttgaaaaac 2004 |||||||||||| ||||||| ||||| | |||||| || || | | ||| ||||||||| Sbjct: 42296 actggtgtagctggtgaaatattgagattgagggcacttataatcttccatttgaaaaac 42355 Query: 2005 tttttcttggtcaagacggagaaggacagagaagaggcaatggatccgggcagtatctgt 2064 ||||||||||| ||||| || |||||||||||||||||||||||||| || ||||||||| Sbjct: 42356 tttttcttggtgaagactgaaaaggacagagaagaggcaatggatcctggtagtatctgt 42415 Query: 2065 ttttactggtctgagcctcgaatacagctatatttcttgcttggtcttgtgtatgctgca 2124 ||| | |||| ||| || || ||||||||||||||||| ||||| ||||| ||||||| Sbjct: 42416 tttgattggtgtgaaccacgtatacagctatatttcttacttggccttgtctatgctgtg 42475 Query: 2125 gtgacaccgctcttgctaccttttatactggtgttctttgcgttgggatacgttgtctac 2184 ||||||||| | ||||| ||||| ||| |||| ||||| | | ||| ||| ||||||||| Sbjct: 42476 gtgacaccgttattgcttcctttcatattggtattcttcgggctggcatatgttgtctac 42535 Query: 2185 cgcca 2189 ||||| Sbjct: 42536 cgcca 42540 Score = 240 bits (121), Expect = 3e-59 Identities = 187/209 (89%) Strand = Plus / Plus Query: 1633 aaatcattcatccaagggtttcttcctggacttgctctgaagatcttcctcatagtgctt 1692 ||||||||||||||||| |||||||| ||| ||||| ||||| ||||||| ||| ||||| Sbjct: 41104 aaatcattcatccaaggttttcttccaggaattgctttgaaggtcttccttatattgctt 41163 Query: 1693 ccaactatactgatgttcatgtcacagtttgaaggattgatatcacagtcatcactagag 1752 ||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||| ||| Sbjct: 41164 ccaactatactgatgtttatgtctaagtttgaaggattaatatcacagtcatcactggag 41223 Query: 1753 cgaagaactgcgtccaagtattttatattcttgttcttcaatgtatttttggggagcatt 1812 |||||| |||| || || |||| ||| |||||||||||||||||||||||||| ||||| Sbjct: 41224 cgaagatctgcatctaaatattatatcttcttgttcttcaatgtatttttgggaagcatc 41283 Query: 1813 gttacaggatctgctttggagcagcttaa 1841 ||||||||||||||||| || |||||||| Sbjct: 41284 gttacaggatctgctttagatcagcttaa 41312 Score = 131 bits (66), Expect = 2e-26 Identities = 99/110 (90%) Strand = Plus / Plus Query: 589 tacttgaagttcttaagctggatgccggctgctctcaagatgcccgaggaggagttgatc 648 |||||||| || ||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 37543 tacttgaaatttttaagttggatgccggctgctctcaagatgccagaggatgagttgatc 37602 Query: 649 gagcatgcgggcctcgattccgttgtctatctacggatatacctcacagg 698 | ||||| ||||| ||||||| ||||||||||||||||||||| ||||| Sbjct: 37603 aatcatgcaggccttgattccgctgtctatctacggatatacctaacagg 37652 Score = 111 bits (56), Expect = 2e-20 Identities = 83/92 (90%) Strand = Plus / Plus Query: 982 gttcttgtacggaacataccaccagaccctgatgaatcagttagcgagcttgtggaacat 1041 |||||||| ||||| ||||| ||||| |||||||||||| |||| ||||| ||||| ||| Sbjct: 39123 gttcttgtgcggaatatacctccagatcctgatgaatcaattagtgagctcgtggagcat 39182 Query: 1042 ttcttccttgtcaatcatcctgatcattatct 1073 ||||||||||| |||||||||||||||||||| Sbjct: 39183 ttcttccttgttaatcatcctgatcattatct 39214 Score = 101 bits (51), Expect = 2e-17 Identities = 81/91 (89%) Strand = Plus / Plus Query: 746 tccctgtgaactggaccaatgatacgctagaaggtttgaaggtagtccacagtgatattg 805 |||||||||||||||| ||||| || ||||| | ||||||||||||||||| | |||| Sbjct: 38038 tccctgtgaactggacaaatgacaccctagacagcatgaaggtagtccacagtaaaattg 38097 Query: 806 acaaactttcaatatccaacataccttatgg 836 |||||||||||||||| |||||||||||||| Sbjct: 38098 acaaactttcaatatcaaacataccttatgg 38128 Score = 99.6 bits (50), Expect = 6e-17 Identities = 68/74 (91%) Strand = Plus / Plus Query: 1087 gtttacaatgcaaataagcttgctgacctggttgaaaagaagaagaaaatgcggaattgg 1146 ||||||||||||||||| |||||||| |||||||| |||||||||||| ||| |||||| Sbjct: 39829 gtttacaatgcaaataaacttgctgatctggttgagaagaagaagaaactgcaaaattgg 39888 Query: 1147 cttgattactacca 1160 |||||||||||||| Sbjct: 39889 cttgattactacca 39902 Score = 81.8 bits (41), Expect = 1e-11 Identities = 65/73 (89%) Strand = Plus / Plus Query: 1199 agactggctttcttggatgttttggttctgaagtggatgctattgatcactgcaaatcag 1258 |||||||||||||||| ||||||||||| || |||||||| ||||| ||| |||| ||| Sbjct: 40056 agactggctttcttggctgttttggttccgaggtggatgccattgaatactacaaagcag 40115 Query: 1259 agattgagaagat 1271 ||||||||||||| Sbjct: 40116 agattgagaagat 40128 Score = 73.8 bits (37), Expect = 3e-09 Identities = 175/221 (79%) Strand = Plus / Plus Query: 2200 aatgtctacaatcaacgatacgagagtggtgcgcagttctggcccaacgtgcatctacgc 2259 |||||||||||||||| ||||||||||||||| ||||| ||||| | ||||| ||| Sbjct: 43154 aatgtctacaatcaacaatacgagagtggtgcacagttttggccgagtgtgcacgggcgc 43213 Query: 2260 ataatcgtagcctcgattgcatcgcagctgcttctccttgggctactgagcacaaagggt 2319 |||||| | || | ||| | ||| ||||| ||||| |||| || |||| ||||| ||| Sbjct: 43214 ataatcattgcattgatcgtatcacagctacttcttattggactgttgagtacaaaaggt 43273 Query: 2320 ttggaggaggcgacgccagttcttctcgttcttcccatactaaccttttggttccacaag 2379 || |||||| |||| ||||||||| | |||||||| | | || |||||||| ||||| Sbjct: 43274 ttcgaggagacgacaccagttcttgttgttcttcctgtgttgacgttttggttttacaag 43333 Query: 2380 tactgcacgcaccggtacaaacctgcgttcgtgaggaaccc 2420 ||||||| | |||||| | ||||| || ||||||||||| Sbjct: 43334 tactgcaagaaccggtttgagcctgcatttgtgaggaaccc 43374 Score = 63.9 bits (32), Expect = 3e-06 Identities = 83/100 (83%) Strand = Plus / Plus Query: 2423 tgcaggaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctca 2482 ||||||| ||||||||||| ||||| ||||| | || |||||||| | |||||| || | Sbjct: 43457 tgcaggaagcgatgaggaaagacaccctggaacgggcaagggagccaaccttcgatctga 43516 Query: 2483 agtcgtacctggcggactcgtacctgcacccggtgttcaa 2522 | |||||||||| | |||||||||||||||||||||| Sbjct: 43517 aagcgtacctggccaatgcgtacctgcacccggtgttcaa 43556 Score = 54.0 bits (27), Expect = 0.003 Identities = 42/47 (89%) Strand = Plus / Plus Query: 931 atgaggttgcgctttcttgcttcagagaaacgccgaccggatcagtt 977 ||||| ||||| |||||||||||||||||||| ||||| || ||||| Sbjct: 38764 atgagattgcggtttcttgcttcagagaaacggcgaccagaccagtt 38810 Score = 50.1 bits (25), Expect = 0.049 Identities = 64/77 (83%) Strand = Plus / Plus Query: 460 gctttcctacggctacagcccatcaacgacaggatcttcttcccgaaatggtacctcaag 519 ||||| ||||| |||||||||||||||| ||| | | ||| || ||||||||||||| Sbjct: 37414 gcttttctacgattacagcccatcaacgatagggtttactttccaaaatggtacctcaga 37473 Query: 520 ggaatgcgggacagccc 536 |||||| | |||||||| Sbjct: 37474 ggaatgagagacagccc 37490 Score = 50.1 bits (25), Expect = 0.049 Identities = 64/77 (83%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||||||| |||||||||| || || | ||| ||| |||| | |||||| Sbjct: 43605 ggaggaggtgatcgtgccgaccaagcgtcaatctcgccggaacactcccgcccagagcaa 43664 Query: 2628 gtacgacggctccgaca 2644 |||||| |||||||||| Sbjct: 43665 gtacgaaggctccgaca 43681 Score = 46.1 bits (23), Expect = 0.77 Identities = 50/59 (84%) Strand = Plus / Plus Query: 844 aggtttattgctcacttggttacggcctatgtatttacattttggacctgctatgtact 902 |||||| || |||||||||||| ||| |||| | || |||||||||||||||||||| Sbjct: 38677 aggtttgttactcacttggttatggcttatgctgtcacgttttggacctgctatgtact 38735
>gb|AC130727.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560F03, complete sequence Length = 45160 Score = 299 bits (151), Expect = 3e-77 Identities = 289/335 (86%) Strand = Plus / Minus Query: 1282 gaagttgaagagcgtaaaaaggtcatgaaggatcccaagtcaattatgccagcagccttt 1341 |||| ||| |||||| ||||| |||||||||||||| ||||| | | |||||||||||| Sbjct: 687 gaagctgatgagcgtcaaaagatcatgaaggatccccagtcagctgttccagcagccttt 628 Query: 1342 gtttcttttcgttcacggtggggtgcagctgtttgtgctcagacacaacaaacaagcaac 1401 ||||| ||||||||||||||||| || |||||||||||||||||||| ||||| || || Sbjct: 627 gtttcatttcgttcacggtggggggctgctgtttgtgctcagacacagcaaaccagtaat 568 Query: 1402 ccaaccctttggctgactgaatgggctccagaacctcgtgatgtctactggagtaatcta 1461 ||||| | ||| | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 567 ccaacagtctggataactgaatgggctccagaacctcgtgatgtctactggaataatcta 508 Query: 1462 tctattccctttgtctccctgacggtcaggaggttgataattggcgtggccttcttcttc 1521 || ||||| ||||| ||||| || || |||||| ||||| ||| ||||| ||||||||| Sbjct: 507 tccattccatttgtgtccctcacagttaggaggctgatagttgctgtggcattcttcttc 448 Query: 1522 ctcaacttcttctatgtcattccaatagcattcgtacagactcttgcaaatcttgaaggc 1581 |||||||| || ||||||||||||||||||||||| || ||||||||| |||||||| Sbjct: 447 ctcaactttttttatgtcattccaatagcattcgtgcaatctcttgcaagccttgaagga 388 Query: 1582 atagagaaggcactaccatttctaaaacctttaat 1616 ||||| ||||| || |||||||| ||||| ||||| Sbjct: 387 atagaaaaggcgcttccatttctgaaacccttaat 353 Score = 210 bits (106), Expect = 2e-50 Identities = 166/186 (89%) Strand = Plus / Minus Query: 1633 aaatcattcatccaagggtttcttcctggacttgctctgaagatcttcctcatagtgctt 1692 ||||||||||||||||| |||||||| ||| ||||| ||||| ||||||| ||| ||||| Sbjct: 186 aaatcattcatccaaggttttcttccaggaattgctttgaaggtcttccttatattgctt 127 Query: 1693 ccaactatactgatgttcatgtcacagtttgaaggattgatatcacagtcatcactagag 1752 ||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||| ||| Sbjct: 126 ccaactatactgatgtttatgtctaagtttgaaggattaatatcacagtcatcactggag 67 Query: 1753 cgaagaactgcgtccaagtattttatattcttgttcttcaatgtatttttggggagcatt 1812 |||||| |||| || || |||| ||| |||||||||||||||||||||||||| ||||| Sbjct: 66 cgaagatctgcatctaaatattatatcttcttgttcttcaatgtatttttgggaagcatc 7 Query: 1813 gttaca 1818 |||||| Sbjct: 6 gttaca 1 Score = 131 bits (66), Expect = 2e-26 Identities = 99/110 (90%) Strand = Plus / Minus Query: 589 tacttgaagttcttaagctggatgccggctgctctcaagatgcccgaggaggagttgatc 648 |||||||| || ||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 3747 tacttgaaatttttaagttggatgccggctgctctcaagatgccagaggatgagttgatc 3688 Query: 649 gagcatgcgggcctcgattccgttgtctatctacggatatacctcacagg 698 | ||||| ||||| ||||||| ||||||||||||||||||||| ||||| Sbjct: 3687 aatcatgcaggccttgattccgctgtctatctacggatatacctaacagg 3638 Score = 111 bits (56), Expect = 2e-20 Identities = 83/92 (90%) Strand = Plus / Minus Query: 982 gttcttgtacggaacataccaccagaccctgatgaatcagttagcgagcttgtggaacat 1041 |||||||| ||||| ||||| ||||| |||||||||||| |||| ||||| ||||| ||| Sbjct: 2167 gttcttgtgcggaatatacctccagatcctgatgaatcaattagtgagctcgtggagcat 2108 Query: 1042 ttcttccttgtcaatcatcctgatcattatct 1073 ||||||||||| |||||||||||||||||||| Sbjct: 2107 ttcttccttgttaatcatcctgatcattatct 2076 Score = 101 bits (51), Expect = 2e-17 Identities = 81/91 (89%) Strand = Plus / Minus Query: 746 tccctgtgaactggaccaatgatacgctagaaggtttgaaggtagtccacagtgatattg 805 |||||||||||||||| ||||| || ||||| | ||||||||||||||||| | |||| Sbjct: 3252 tccctgtgaactggacaaatgacaccctagacagcatgaaggtagtccacagtaaaattg 3193 Query: 806 acaaactttcaatatccaacataccttatgg 836 |||||||||||||||| |||||||||||||| Sbjct: 3192 acaaactttcaatatcaaacataccttatgg 3162 Score = 99.6 bits (50), Expect = 6e-17 Identities = 68/74 (91%) Strand = Plus / Minus Query: 1087 gtttacaatgcaaataagcttgctgacctggttgaaaagaagaagaaaatgcggaattgg 1146 ||||||||||||||||| |||||||| |||||||| |||||||||||| ||| |||||| Sbjct: 1461 gtttacaatgcaaataaacttgctgatctggttgagaagaagaagaaactgcaaaattgg 1402 Query: 1147 cttgattactacca 1160 |||||||||||||| Sbjct: 1401 cttgattactacca 1388 Score = 81.8 bits (41), Expect = 1e-11 Identities = 65/73 (89%) Strand = Plus / Minus Query: 1199 agactggctttcttggatgttttggttctgaagtggatgctattgatcactgcaaatcag 1258 |||||||||||||||| ||||||||||| || |||||||| ||||| ||| |||| ||| Sbjct: 1234 agactggctttcttggctgttttggttccgaggtggatgccattgaatactacaaagcag 1175 Query: 1259 agattgagaagat 1271 ||||||||||||| Sbjct: 1174 agattgagaagat 1162 Score = 54.0 bits (27), Expect = 0.003 Identities = 42/47 (89%) Strand = Plus / Minus Query: 931 atgaggttgcgctttcttgcttcagagaaacgccgaccggatcagtt 977 ||||| ||||| |||||||||||||||||||| ||||| || ||||| Sbjct: 2526 atgagattgcggtttcttgcttcagagaaacggcgaccagaccagtt 2480 Score = 50.1 bits (25), Expect = 0.049 Identities = 64/77 (83%) Strand = Plus / Minus Query: 460 gctttcctacggctacagcccatcaacgacaggatcttcttcccgaaatggtacctcaag 519 ||||| ||||| |||||||||||||||| ||| | | ||| || ||||||||||||| Sbjct: 3876 gcttttctacgattacagcccatcaacgatagggtttactttccaaaatggtacctcaga 3817 Query: 520 ggaatgcgggacagccc 536 |||||| | |||||||| Sbjct: 3816 ggaatgagagacagccc 3800 Score = 46.1 bits (23), Expect = 0.77 Identities = 50/59 (84%) Strand = Plus / Minus Query: 844 aggtttattgctcacttggttacggcctatgtatttacattttggacctgctatgtact 902 |||||| || |||||||||||| ||| |||| | || |||||||||||||||||||| Sbjct: 2613 aggtttgttactcacttggttatggcttatgctgtcacgttttggacctgctatgtact 2555
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 299 bits (151), Expect = 3e-77 Identities = 289/335 (86%) Strand = Plus / Plus Query: 1282 gaagttgaagagcgtaaaaaggtcatgaaggatcccaagtcaattatgccagcagccttt 1341 |||| ||| |||||| ||||| |||||||||||||| ||||| | | |||||||||||| Sbjct: 29392578 gaagctgatgagcgtcaaaagatcatgaaggatccccagtcagctgttccagcagccttt 29392637 Query: 1342 gtttcttttcgttcacggtggggtgcagctgtttgtgctcagacacaacaaacaagcaac 1401 ||||| ||||||||||||||||| || |||||||||||||||||||| ||||| || || Sbjct: 29392638 gtttcatttcgttcacggtggggggctgctgtttgtgctcagacacagcaaaccagtaat 29392697 Query: 1402 ccaaccctttggctgactgaatgggctccagaacctcgtgatgtctactggagtaatcta 1461 ||||| | ||| | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 29392698 ccaacagtctggataactgaatgggctccagaacctcgtgatgtctactggaataatcta 29392757 Query: 1462 tctattccctttgtctccctgacggtcaggaggttgataattggcgtggccttcttcttc 1521 || ||||| ||||| ||||| || || |||||| ||||| ||| ||||| ||||||||| Sbjct: 29392758 tccattccatttgtgtccctcacagttaggaggctgatagttgctgtggcattcttcttc 29392817 Query: 1522 ctcaacttcttctatgtcattccaatagcattcgtacagactcttgcaaatcttgaaggc 1581 |||||||| || ||||||||||||||||||||||| || ||||||||| |||||||| Sbjct: 29392818 ctcaactttttttatgtcattccaatagcattcgtgcaatctcttgcaagccttgaagga 29392877 Query: 1582 atagagaaggcactaccatttctaaaacctttaat 1616 ||||| ||||| || |||||||| ||||| ||||| Sbjct: 29392878 atagaaaaggcgcttccatttctgaaacccttaat 29392912 Score = 248 bits (125), Expect = 1e-61 Identities = 260/305 (85%) Strand = Plus / Plus Query: 1885 ggtgtagccataccaatgaaggcaacatttttcataacatacgtaatggtcgatggttgg 1944 ||||||||||| ||||||| ||| || |||||||||||||| |||||||| || |||||| Sbjct: 29394211 ggtgtagccattccaatgagggcgacttttttcataacatatgtaatggttgacggttgg 29394270 Query: 1945 actggtgtagctcttgaaatactgagaataagggcatttgtactataccacttgaaaaac 2004 |||||||||||| ||||||| ||||| | |||||| || || | | ||| ||||||||| Sbjct: 29394271 actggtgtagctggtgaaatattgagattgagggcacttataatcttccatttgaaaaac 29394330 Query: 2005 tttttcttggtcaagacggagaaggacagagaagaggcaatggatccgggcagtatctgt 2064 ||||||||||| ||||| || |||||||||||||||||||||||||| || ||||||||| Sbjct: 29394331 tttttcttggtgaagactgaaaaggacagagaagaggcaatggatcctggtagtatctgt 29394390 Query: 2065 ttttactggtctgagcctcgaatacagctatatttcttgcttggtcttgtgtatgctgca 2124 ||| | |||| ||| || || ||||||||||||||||| ||||| ||||| ||||||| Sbjct: 29394391 tttgattggtgtgaaccacgtatacagctatatttcttacttggccttgtctatgctgtg 29394450 Query: 2125 gtgacaccgctcttgctaccttttatactggtgttctttgcgttgggatacgttgtctac 2184 ||||||||| | ||||| ||||| ||| |||| ||||| | | ||| ||| ||||||||| Sbjct: 29394451 gtgacaccgttattgcttcctttcatattggtattcttcgggctggcatatgttgtctac 29394510 Query: 2185 cgcca 2189 ||||| Sbjct: 29394511 cgcca 29394515 Score = 240 bits (121), Expect = 3e-59 Identities = 187/209 (89%) Strand = Plus / Plus Query: 1633 aaatcattcatccaagggtttcttcctggacttgctctgaagatcttcctcatagtgctt 1692 ||||||||||||||||| |||||||| ||| ||||| ||||| ||||||| ||| ||||| Sbjct: 29393079 aaatcattcatccaaggttttcttccaggaattgctttgaaggtcttccttatattgctt 29393138 Query: 1693 ccaactatactgatgttcatgtcacagtttgaaggattgatatcacagtcatcactagag 1752 ||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||| ||| Sbjct: 29393139 ccaactatactgatgtttatgtctaagtttgaaggattaatatcacagtcatcactggag 29393198 Query: 1753 cgaagaactgcgtccaagtattttatattcttgttcttcaatgtatttttggggagcatt 1812 |||||| |||| || || |||| ||| |||||||||||||||||||||||||| ||||| Sbjct: 29393199 cgaagatctgcatctaaatattatatcttcttgttcttcaatgtatttttgggaagcatc 29393258 Query: 1813 gttacaggatctgctttggagcagcttaa 1841 ||||||||||||||||| || |||||||| Sbjct: 29393259 gttacaggatctgctttagatcagcttaa 29393287 Score = 131 bits (66), Expect = 2e-26 Identities = 99/110 (90%) Strand = Plus / Plus Query: 589 tacttgaagttcttaagctggatgccggctgctctcaagatgcccgaggaggagttgatc 648 |||||||| || ||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 29389518 tacttgaaatttttaagttggatgccggctgctctcaagatgccagaggatgagttgatc 29389577 Query: 649 gagcatgcgggcctcgattccgttgtctatctacggatatacctcacagg 698 | ||||| ||||| ||||||| ||||||||||||||||||||| ||||| Sbjct: 29389578 aatcatgcaggccttgattccgctgtctatctacggatatacctaacagg 29389627 Score = 111 bits (56), Expect = 2e-20 Identities = 83/92 (90%) Strand = Plus / Plus Query: 982 gttcttgtacggaacataccaccagaccctgatgaatcagttagcgagcttgtggaacat 1041 |||||||| ||||| ||||| ||||| |||||||||||| |||| ||||| ||||| ||| Sbjct: 29391098 gttcttgtgcggaatatacctccagatcctgatgaatcaattagtgagctcgtggagcat 29391157 Query: 1042 ttcttccttgtcaatcatcctgatcattatct 1073 ||||||||||| |||||||||||||||||||| Sbjct: 29391158 ttcttccttgttaatcatcctgatcattatct 29391189 Score = 101 bits (51), Expect = 2e-17 Identities = 81/91 (89%) Strand = Plus / Plus Query: 746 tccctgtgaactggaccaatgatacgctagaaggtttgaaggtagtccacagtgatattg 805 |||||||||||||||| ||||| || ||||| | ||||||||||||||||| | |||| Sbjct: 29390013 tccctgtgaactggacaaatgacaccctagacagcatgaaggtagtccacagtaaaattg 29390072 Query: 806 acaaactttcaatatccaacataccttatgg 836 |||||||||||||||| |||||||||||||| Sbjct: 29390073 acaaactttcaatatcaaacataccttatgg 29390103 Score = 99.6 bits (50), Expect = 6e-17 Identities = 68/74 (91%) Strand = Plus / Plus Query: 1087 gtttacaatgcaaataagcttgctgacctggttgaaaagaagaagaaaatgcggaattgg 1146 ||||||||||||||||| |||||||| |||||||| |||||||||||| ||| |||||| Sbjct: 29391804 gtttacaatgcaaataaacttgctgatctggttgagaagaagaagaaactgcaaaattgg 29391863 Query: 1147 cttgattactacca 1160 |||||||||||||| Sbjct: 29391864 cttgattactacca 29391877 Score = 81.8 bits (41), Expect = 1e-11 Identities = 65/73 (89%) Strand = Plus / Plus Query: 1199 agactggctttcttggatgttttggttctgaagtggatgctattgatcactgcaaatcag 1258 |||||||||||||||| ||||||||||| || |||||||| ||||| ||| |||| ||| Sbjct: 29392031 agactggctttcttggctgttttggttccgaggtggatgccattgaatactacaaagcag 29392090 Query: 1259 agattgagaagat 1271 ||||||||||||| Sbjct: 29392091 agattgagaagat 29392103 Score = 73.8 bits (37), Expect = 3e-09 Identities = 175/221 (79%) Strand = Plus / Plus Query: 2200 aatgtctacaatcaacgatacgagagtggtgcgcagttctggcccaacgtgcatctacgc 2259 |||||||||||||||| ||||||||||||||| ||||| ||||| | ||||| ||| Sbjct: 29395129 aatgtctacaatcaacaatacgagagtggtgcacagttttggccgagtgtgcacgggcgc 29395188 Query: 2260 ataatcgtagcctcgattgcatcgcagctgcttctccttgggctactgagcacaaagggt 2319 |||||| | || | ||| | ||| ||||| ||||| |||| || |||| ||||| ||| Sbjct: 29395189 ataatcattgcattgatcgtatcacagctacttcttattggactgttgagtacaaaaggt 29395248 Query: 2320 ttggaggaggcgacgccagttcttctcgttcttcccatactaaccttttggttccacaag 2379 || |||||| |||| ||||||||| | |||||||| | | || |||||||| ||||| Sbjct: 29395249 ttcgaggagacgacaccagttcttgttgttcttcctgtgttgacgttttggttttacaag 29395308 Query: 2380 tactgcacgcaccggtacaaacctgcgttcgtgaggaaccc 2420 ||||||| | |||||| | ||||| || ||||||||||| Sbjct: 29395309 tactgcaagaaccggtttgagcctgcatttgtgaggaaccc 29395349 Score = 63.9 bits (32), Expect = 3e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 2192 agatcattaatgtctacaatcaacgatacgagagtggtgcgcagttctggcc 2243 |||||||||||||||||||||| | ||| |||||||| ||||| |||||||| Sbjct: 19021165 agatcattaatgtctacaatcagcaatatgagagtggcgcgcaattctggcc 19021216 Score = 63.9 bits (32), Expect = 3e-06 Identities = 83/100 (83%) Strand = Plus / Plus Query: 2423 tgcaggaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctca 2482 ||||||| ||||||||||| ||||| ||||| | || |||||||| | |||||| || | Sbjct: 29395432 tgcaggaagcgatgaggaaagacaccctggaacgggcaagggagccaaccttcgatctga 29395491 Query: 2483 agtcgtacctggcggactcgtacctgcacccggtgttcaa 2522 | |||||||||| | |||||||||||||||||||||| Sbjct: 29395492 aagcgtacctggccaatgcgtacctgcacccggtgttcaa 29395531 Score = 58.0 bits (29), Expect = 2e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1900 atgaaggcaacatttttcataacatacgtaatggtcgatggttggactggtgt 1952 ||||| |||||||||||||| ||||| |||||||| ||||| ||| ||||||| Sbjct: 19020732 atgaaagcaacatttttcatcacatatgtaatggttgatggctgggctggtgt 19020784 Score = 56.0 bits (28), Expect = 8e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 998 taccaccagaccctgatgaatcagttagcgagcttgtggaacatttcttccttgtcaatc 1057 ||||||| ||||| |||||| ||||||| |||| ||| || || ||||| |||||||| Sbjct: 19018238 taccacctgacccagatgaaacagttagtgagcatgttgagcacttctttgctgtcaatc 19018297 Query: 1058 atcctgatcattatct 1073 ||| |||||||||||| Sbjct: 19018298 atcgtgatcattatct 19018313 Score = 54.0 bits (27), Expect = 0.003 Identities = 42/47 (89%) Strand = Plus / Plus Query: 931 atgaggttgcgctttcttgcttcagagaaacgccgaccggatcagtt 977 ||||| ||||| |||||||||||||||||||| ||||| || ||||| Sbjct: 29390739 atgagattgcggtttcttgcttcagagaaacggcgaccagaccagtt 29390785 Score = 52.0 bits (26), Expect = 0.013 Identities = 41/46 (89%) Strand = Plus / Plus Query: 473 tacagcccatcaacgacaggatcttcttcccgaaatggtacctcaa 518 ||||||| |||||||||||| ||| ||| || |||||||||||||| Sbjct: 19016635 tacagcctatcaacgacagggtctactttcccaaatggtacctcaa 19016680 Score = 50.1 bits (25), Expect = 0.049 Identities = 73/89 (82%) Strand = Plus / Plus Query: 1357 cggtggggtgcagctgtttgtgctcagacacaacaaacaagcaacccaaccctttggctg 1416 |||||||| || |||||||| ||||| || ||||| || ||||| ||||| | ||||| Sbjct: 19019116 cggtggggagctgctgtttgcgctcaaacgcaacagacgagcaatccaacgttgtggctt 19019175 Query: 1417 actgaatgggctccagaacctcgtgatgt 1445 || || ||||| ||||||||||| ||||| Sbjct: 19019176 accgagtgggccccagaacctcgggatgt 19019204 Score = 50.1 bits (25), Expect = 0.049 Identities = 64/77 (83%) Strand = Plus / Plus Query: 460 gctttcctacggctacagcccatcaacgacaggatcttcttcccgaaatggtacctcaag 519 ||||| ||||| |||||||||||||||| ||| | | ||| || ||||||||||||| Sbjct: 29389389 gcttttctacgattacagcccatcaacgatagggtttactttccaaaatggtacctcaga 29389448 Query: 520 ggaatgcgggacagccc 536 |||||| | |||||||| Sbjct: 29389449 ggaatgagagacagccc 29389465 Score = 50.1 bits (25), Expect = 0.049 Identities = 64/77 (83%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||||||| |||||||||| || || | ||| ||| |||| | |||||| Sbjct: 29395580 ggaggaggtgatcgtgccgaccaagcgtcaatctcgccggaacactcccgcccagagcaa 29395639 Query: 2628 gtacgacggctccgaca 2644 |||||| |||||||||| Sbjct: 29395640 gtacgaaggctccgaca 29395656 Score = 46.1 bits (23), Expect = 0.77 Identities = 50/59 (84%) Strand = Plus / Plus Query: 844 aggtttattgctcacttggttacggcctatgtatttacattttggacctgctatgtact 902 |||||| || |||||||||||| ||| |||| | || |||||||||||||||||||| Sbjct: 29390652 aggtttgttactcacttggttatggcttatgctgtcacgttttggacctgctatgtact 29390710
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 165 bits (83), Expect = 1e-36 Identities = 257/315 (81%) Strand = Plus / Minus Query: 1306 atgaaggatcccaagtcaattatgccagcagcctttgtttcttttcgttcacggtggggt 1365 ||||||||||| || ||| || ||||||||||||||||||| || || || |||||||| Sbjct: 19396097 atgaaggatccaaaatcagttgtgccagcagcctttgtttccttccgatcgcggtgggga 19396038 Query: 1366 gcagctgtttgtgctcagacacaacaaacaagcaacccaaccctttggctgactgaatgg 1425 ||||| || |||||||||||||| ||||| || || ||||| | ||| |||| || ||| Sbjct: 19396037 gcagcagtgtgtgctcagacacagcaaaccagtaatccaactgtctggttgaccgagtgg 19395978 Query: 1426 gctccagaacctcgtgatgtctactggagtaatctatctattccctttgtctccctgacg 1485 || |||||||||||||||||||| ||| ||| || |||||||| ||||| | |||||| Sbjct: 19395977 gccccagaacctcgtgatgtctattgggataacctctctattccttttgtttacctgaca 19395918 Query: 1486 gtcaggaggttgataattggcgtggccttcttcttcctcaacttcttctatgtcattcca 1545 | |||||| ||||||||| || || ||||||||||| |||||||| ||||| | || Sbjct: 19395917 attaggaggctgataattgcggttgcattcttcttcctgaacttcttttatgtgctcccg 19395858 Query: 1546 atagcattcgtacagactcttgcaaatcttgaaggcatagagaaggcactaccatttcta 1605 || ||||| || ||| | ||||||||| ||||||| || ||||||||| |||||||| Sbjct: 19395857 attgcatttgttcagtcccttgcaaatattgaagggattgagaaggcagctccatttctg 19395798 Query: 1606 aaacctttaattgaa 1620 || ||||| |||||| Sbjct: 19395797 aagcctttgattgaa 19395783 Score = 141 bits (71), Expect = 2e-29 Identities = 215/263 (81%) Strand = Plus / Minus Query: 1870 ataccaaggatcattggtgtagccataccaatgaaggcaacatttttcataacatacgta 1929 |||||||||| ||||||| ||| || |||||||| ||||| ||||| |||||||| ||| Sbjct: 19393797 ataccaaggacaattggtgaagcaattccaatgaaagcaaccttttttataacatatgta 19393738 Query: 1930 atggtcgatggttggactggtgtagctcttgaaatactgagaataagggcatttgtacta 1989 ||||| ||||||||| |||| |||||| |||||| | ||| | | |||| || | Sbjct: 19393737 atggttgatggttgggctggggtagctggtgaaattttaagattgaaaccattgataatc 19393678 Query: 1990 taccacttgaaaaactttttcttggtcaagacggagaaggacagagaagaggcaatggat 2049 | |||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| Sbjct: 19393677 ttccacttgaaaaactttttcttggtcaagactgagaaagacagagaagaagcaatggac 19393618 Query: 2050 ccgggcagtatctgtttttactggtctgagcctcgaatacagctatatttcttgcttggt 2109 || || || || ||||| ||| |||||||| ||||||||| ||||||||||| || Sbjct: 19393617 cctggaagcattggttttgactcaaatgagcctcaaatacagctctatttcttgctcgga 19393558 Query: 2110 cttgtgtatgctgcagtgacacc 2132 ||||| ||||||| |||||||| Sbjct: 19393557 cttgtctatgctgtggtgacacc 19393535 Score = 105 bits (53), Expect = 1e-18 Identities = 170/209 (81%) Strand = Plus / Minus Query: 1630 attaaatcattcatccaagggtttcttcctggacttgctctgaagatcttcctcatagtg 1689 |||||||||||||||||||| ||||| || ||| ||||||||||||| ||||| ||| || Sbjct: 19394750 attaaatcattcatccaaggatttctgccaggaattgctctgaagattttccttatattg 19394691 Query: 1690 cttccaactatactgatgttcatgtcacagtttgaaggattgatatcacagtcatcacta 1749 || || | ||| | ||||| ||||| | |||||||||||| ||| ||| ||||| Sbjct: 19394690 ctccctagcatattaatgtttatgtctaaagttgaaggattgacatcggtgtcctcactg 19394631 Query: 1750 gagcgaagaactgcgtccaagtattttatattcttgttcttcaatgtatttttggggagc 1809 ||| | ||| |||| | ||||| | ||| ||||||||||| |||||||| ||||| ||| Sbjct: 19394630 gagaggagatctgcttttaagtactatatcttcttgttctttaatgtattcttgggaagc 19394571 Query: 1810 attgttacaggatctgctttggagcagct 1838 ||| || ||||||||||||| |||||||| Sbjct: 19394570 attattgcaggatctgctttagagcagct 19394542 Score = 89.7 bits (45), Expect = 6e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 985 cttgtacggaacataccaccagaccctgatgaatcagttagcgagcttgtggaacatttc 1044 ||||| ||||| ||||| || || |||||||||||| || | |||||||||||||||||| Sbjct: 19397126 cttgtgcggaatataccgcctgatcctgatgaatcaattggtgagcttgtggaacatttc 19397067 Query: 1045 ttccttgtcaatcatcctgatcattatct 1073 |||||||| || |||||||| |||||||| Sbjct: 19397066 ttccttgtaaaccatcctgaccattatct 19397038 Score = 77.8 bits (39), Expect = 2e-10 Identities = 39/39 (100%) Strand = Plus / Minus Query: 793 cacagtgatattgacaaactttcaatatccaacatacct 831 ||||||||||||||||||||||||||||||||||||||| Sbjct: 19398560 cacagtgatattgacaaactttcaatatccaacatacct 19398522 Score = 71.9 bits (36), Expect = 1e-08 Identities = 72/84 (85%) Strand = Plus / Minus Query: 1199 agactggctttcttggatgttttggttctgaagtggatgctattgatcactgcaaatcag 1258 ||||||| |||||||||||||||||||| | |||||||||||||| ||| || ||| | Sbjct: 19396504 agactggttttcttggatgttttggttcaaaggtggatgctattgaatactacacatctg 19396445 Query: 1259 agattgagaagataggaaaggaag 1282 | ||||||| ||||| |||||||| Sbjct: 19396444 aaattgagaggatagaaaaggaag 19396421 Score = 67.9 bits (34), Expect = 2e-07 Identities = 82/98 (83%) Strand = Plus / Minus Query: 589 tacttgaagttcttaagctggatgccggctgctctcaagatgcccgaggaggagttgatc 648 ||||||||| ||||||| |||||||| ||||||||||| ||||| ||||| ||||| || Sbjct: 19399133 tacttgaaggtcttaagttggatgcctgctgctctcaaaatgccagaggatgagttaatt 19399074 Query: 649 gagcatgcgggcctcgattccgttgtctatctacggat 686 ||||| ||||| ||||| | ||||||||| ||||| Sbjct: 19399073 agccatgcaggccttgattcagctgtctatctgcggat 19399036 Score = 65.9 bits (33), Expect = 8e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 1093 aatgcaaataagcttgctgacctggttgaaaagaagaagaaaatgcggaattggcttgat 1152 |||||||||||||||| | | |||| || ||||||||||||||| ||||||||||||| Sbjct: 19396750 aatgcaaataagcttgataagatggtcaaagagaagaagaaaatgcagaattggcttgat 19396691 Query: 1153 tacta 1157 ||||| Sbjct: 19396690 tacta 19396686 Score = 54.0 bits (27), Expect = 0.003 Identities = 39/43 (90%) Strand = Plus / Minus Query: 938 tgcgctttcttgcttcagagaaacgccgaccggatcagttcac 980 ||||||||||||| |||||||| ||||| || ||||||||||| Sbjct: 19397854 tgcgctttcttgcatcagagaagcgccgcccagatcagttcac 19397812 Score = 46.1 bits (23), Expect = 0.77 Identities = 50/59 (84%) Strand = Plus / Minus Query: 460 gctttcctacggctacagcccatcaacgacaggatcttcttcccgaaatggtacctcaa 518 |||||||| || ||||||||||||||||| ||| | | |||||| || ||||| ||||| Sbjct: 19399262 gctttcctgcgactacagcccatcaacgatagggtttacttcccaaagtggtatctcaa 19399204
>dbj|AP003449.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086A10 Length = 151071 Score = 165 bits (83), Expect = 1e-36 Identities = 257/315 (81%) Strand = Plus / Minus Query: 1306 atgaaggatcccaagtcaattatgccagcagcctttgtttcttttcgttcacggtggggt 1365 ||||||||||| || ||| || ||||||||||||||||||| || || || |||||||| Sbjct: 4913 atgaaggatccaaaatcagttgtgccagcagcctttgtttccttccgatcgcggtgggga 4854 Query: 1366 gcagctgtttgtgctcagacacaacaaacaagcaacccaaccctttggctgactgaatgg 1425 ||||| || |||||||||||||| ||||| || || ||||| | ||| |||| || ||| Sbjct: 4853 gcagcagtgtgtgctcagacacagcaaaccagtaatccaactgtctggttgaccgagtgg 4794 Query: 1426 gctccagaacctcgtgatgtctactggagtaatctatctattccctttgtctccctgacg 1485 || |||||||||||||||||||| ||| ||| || |||||||| ||||| | |||||| Sbjct: 4793 gccccagaacctcgtgatgtctattgggataacctctctattccttttgtttacctgaca 4734 Query: 1486 gtcaggaggttgataattggcgtggccttcttcttcctcaacttcttctatgtcattcca 1545 | |||||| ||||||||| || || ||||||||||| |||||||| ||||| | || Sbjct: 4733 attaggaggctgataattgcggttgcattcttcttcctgaacttcttttatgtgctcccg 4674 Query: 1546 atagcattcgtacagactcttgcaaatcttgaaggcatagagaaggcactaccatttcta 1605 || ||||| || ||| | ||||||||| ||||||| || ||||||||| |||||||| Sbjct: 4673 attgcatttgttcagtcccttgcaaatattgaagggattgagaaggcagctccatttctg 4614 Query: 1606 aaacctttaattgaa 1620 || ||||| |||||| Sbjct: 4613 aagcctttgattgaa 4599 Score = 141 bits (71), Expect = 2e-29 Identities = 215/263 (81%) Strand = Plus / Minus Query: 1870 ataccaaggatcattggtgtagccataccaatgaaggcaacatttttcataacatacgta 1929 |||||||||| ||||||| ||| || |||||||| ||||| ||||| |||||||| ||| Sbjct: 2613 ataccaaggacaattggtgaagcaattccaatgaaagcaaccttttttataacatatgta 2554 Query: 1930 atggtcgatggttggactggtgtagctcttgaaatactgagaataagggcatttgtacta 1989 ||||| ||||||||| |||| |||||| |||||| | ||| | | |||| || | Sbjct: 2553 atggttgatggttgggctggggtagctggtgaaattttaagattgaaaccattgataatc 2494 Query: 1990 taccacttgaaaaactttttcttggtcaagacggagaaggacagagaagaggcaatggat 2049 | |||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| Sbjct: 2493 ttccacttgaaaaactttttcttggtcaagactgagaaagacagagaagaagcaatggac 2434 Query: 2050 ccgggcagtatctgtttttactggtctgagcctcgaatacagctatatttcttgcttggt 2109 || || || || ||||| ||| |||||||| ||||||||| ||||||||||| || Sbjct: 2433 cctggaagcattggttttgactcaaatgagcctcaaatacagctctatttcttgctcgga 2374 Query: 2110 cttgtgtatgctgcagtgacacc 2132 ||||| ||||||| |||||||| Sbjct: 2373 cttgtctatgctgtggtgacacc 2351 Score = 105 bits (53), Expect = 1e-18 Identities = 170/209 (81%) Strand = Plus / Minus Query: 1630 attaaatcattcatccaagggtttcttcctggacttgctctgaagatcttcctcatagtg 1689 |||||||||||||||||||| ||||| || ||| ||||||||||||| ||||| ||| || Sbjct: 3566 attaaatcattcatccaaggatttctgccaggaattgctctgaagattttccttatattg 3507 Query: 1690 cttccaactatactgatgttcatgtcacagtttgaaggattgatatcacagtcatcacta 1749 || || | ||| | ||||| ||||| | |||||||||||| ||| ||| ||||| Sbjct: 3506 ctccctagcatattaatgtttatgtctaaagttgaaggattgacatcggtgtcctcactg 3447 Query: 1750 gagcgaagaactgcgtccaagtattttatattcttgttcttcaatgtatttttggggagc 1809 ||| | ||| |||| | ||||| | ||| ||||||||||| |||||||| ||||| ||| Sbjct: 3446 gagaggagatctgcttttaagtactatatcttcttgttctttaatgtattcttgggaagc 3387 Query: 1810 attgttacaggatctgctttggagcagct 1838 ||| || ||||||||||||| |||||||| Sbjct: 3386 attattgcaggatctgctttagagcagct 3358 Score = 89.7 bits (45), Expect = 6e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 985 cttgtacggaacataccaccagaccctgatgaatcagttagcgagcttgtggaacatttc 1044 ||||| ||||| ||||| || || |||||||||||| || | |||||||||||||||||| Sbjct: 5942 cttgtgcggaatataccgcctgatcctgatgaatcaattggtgagcttgtggaacatttc 5883 Query: 1045 ttccttgtcaatcatcctgatcattatct 1073 |||||||| || |||||||| |||||||| Sbjct: 5882 ttccttgtaaaccatcctgaccattatct 5854 Score = 77.8 bits (39), Expect = 2e-10 Identities = 39/39 (100%) Strand = Plus / Minus Query: 793 cacagtgatattgacaaactttcaatatccaacatacct 831 ||||||||||||||||||||||||||||||||||||||| Sbjct: 7376 cacagtgatattgacaaactttcaatatccaacatacct 7338 Score = 71.9 bits (36), Expect = 1e-08 Identities = 72/84 (85%) Strand = Plus / Minus Query: 1199 agactggctttcttggatgttttggttctgaagtggatgctattgatcactgcaaatcag 1258 ||||||| |||||||||||||||||||| | |||||||||||||| ||| || ||| | Sbjct: 5320 agactggttttcttggatgttttggttcaaaggtggatgctattgaatactacacatctg 5261 Query: 1259 agattgagaagataggaaaggaag 1282 | ||||||| ||||| |||||||| Sbjct: 5260 aaattgagaggatagaaaaggaag 5237 Score = 67.9 bits (34), Expect = 2e-07 Identities = 82/98 (83%) Strand = Plus / Minus Query: 589 tacttgaagttcttaagctggatgccggctgctctcaagatgcccgaggaggagttgatc 648 ||||||||| ||||||| |||||||| ||||||||||| ||||| ||||| ||||| || Sbjct: 7949 tacttgaaggtcttaagttggatgcctgctgctctcaaaatgccagaggatgagttaatt 7890 Query: 649 gagcatgcgggcctcgattccgttgtctatctacggat 686 ||||| ||||| ||||| | ||||||||| ||||| Sbjct: 7889 agccatgcaggccttgattcagctgtctatctgcggat 7852 Score = 65.9 bits (33), Expect = 8e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 1093 aatgcaaataagcttgctgacctggttgaaaagaagaagaaaatgcggaattggcttgat 1152 |||||||||||||||| | | |||| || ||||||||||||||| ||||||||||||| Sbjct: 5566 aatgcaaataagcttgataagatggtcaaagagaagaagaaaatgcagaattggcttgat 5507 Query: 1153 tacta 1157 ||||| Sbjct: 5506 tacta 5502 Score = 54.0 bits (27), Expect = 0.003 Identities = 39/43 (90%) Strand = Plus / Minus Query: 938 tgcgctttcttgcttcagagaaacgccgaccggatcagttcac 980 ||||||||||||| |||||||| ||||| || ||||||||||| Sbjct: 6670 tgcgctttcttgcatcagagaagcgccgcccagatcagttcac 6628 Score = 46.1 bits (23), Expect = 0.77 Identities = 50/59 (84%) Strand = Plus / Minus Query: 460 gctttcctacggctacagcccatcaacgacaggatcttcttcccgaaatggtacctcaa 518 |||||||| || ||||||||||||||||| ||| | | |||||| || ||||| ||||| Sbjct: 8078 gctttcctgcgactacagcccatcaacgatagggtttacttcccaaagtggtatctcaa 8020
>dbj|AP003445.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1029_F04 Length = 141834 Score = 165 bits (83), Expect = 1e-36 Identities = 257/315 (81%) Strand = Plus / Minus Query: 1306 atgaaggatcccaagtcaattatgccagcagcctttgtttcttttcgttcacggtggggt 1365 ||||||||||| || ||| || ||||||||||||||||||| || || || |||||||| Sbjct: 124102 atgaaggatccaaaatcagttgtgccagcagcctttgtttccttccgatcgcggtgggga 124043 Query: 1366 gcagctgtttgtgctcagacacaacaaacaagcaacccaaccctttggctgactgaatgg 1425 ||||| || |||||||||||||| ||||| || || ||||| | ||| |||| || ||| Sbjct: 124042 gcagcagtgtgtgctcagacacagcaaaccagtaatccaactgtctggttgaccgagtgg 123983 Query: 1426 gctccagaacctcgtgatgtctactggagtaatctatctattccctttgtctccctgacg 1485 || |||||||||||||||||||| ||| ||| || |||||||| ||||| | |||||| Sbjct: 123982 gccccagaacctcgtgatgtctattgggataacctctctattccttttgtttacctgaca 123923 Query: 1486 gtcaggaggttgataattggcgtggccttcttcttcctcaacttcttctatgtcattcca 1545 | |||||| ||||||||| || || ||||||||||| |||||||| ||||| | || Sbjct: 123922 attaggaggctgataattgcggttgcattcttcttcctgaacttcttttatgtgctcccg 123863 Query: 1546 atagcattcgtacagactcttgcaaatcttgaaggcatagagaaggcactaccatttcta 1605 || ||||| || ||| | ||||||||| ||||||| || ||||||||| |||||||| Sbjct: 123862 attgcatttgttcagtcccttgcaaatattgaagggattgagaaggcagctccatttctg 123803 Query: 1606 aaacctttaattgaa 1620 || ||||| |||||| Sbjct: 123802 aagcctttgattgaa 123788 Score = 141 bits (71), Expect = 2e-29 Identities = 215/263 (81%) Strand = Plus / Minus Query: 1870 ataccaaggatcattggtgtagccataccaatgaaggcaacatttttcataacatacgta 1929 |||||||||| ||||||| ||| || |||||||| ||||| ||||| |||||||| ||| Sbjct: 121802 ataccaaggacaattggtgaagcaattccaatgaaagcaaccttttttataacatatgta 121743 Query: 1930 atggtcgatggttggactggtgtagctcttgaaatactgagaataagggcatttgtacta 1989 ||||| ||||||||| |||| |||||| |||||| | ||| | | |||| || | Sbjct: 121742 atggttgatggttgggctggggtagctggtgaaattttaagattgaaaccattgataatc 121683 Query: 1990 taccacttgaaaaactttttcttggtcaagacggagaaggacagagaagaggcaatggat 2049 | |||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| Sbjct: 121682 ttccacttgaaaaactttttcttggtcaagactgagaaagacagagaagaagcaatggac 121623 Query: 2050 ccgggcagtatctgtttttactggtctgagcctcgaatacagctatatttcttgcttggt 2109 || || || || ||||| ||| |||||||| ||||||||| ||||||||||| || Sbjct: 121622 cctggaagcattggttttgactcaaatgagcctcaaatacagctctatttcttgctcgga 121563 Query: 2110 cttgtgtatgctgcagtgacacc 2132 ||||| ||||||| |||||||| Sbjct: 121562 cttgtctatgctgtggtgacacc 121540 Score = 105 bits (53), Expect = 1e-18 Identities = 170/209 (81%) Strand = Plus / Minus Query: 1630 attaaatcattcatccaagggtttcttcctggacttgctctgaagatcttcctcatagtg 1689 |||||||||||||||||||| ||||| || ||| ||||||||||||| ||||| ||| || Sbjct: 122755 attaaatcattcatccaaggatttctgccaggaattgctctgaagattttccttatattg 122696 Query: 1690 cttccaactatactgatgttcatgtcacagtttgaaggattgatatcacagtcatcacta 1749 || || | ||| | ||||| ||||| | |||||||||||| ||| ||| ||||| Sbjct: 122695 ctccctagcatattaatgtttatgtctaaagttgaaggattgacatcggtgtcctcactg 122636 Query: 1750 gagcgaagaactgcgtccaagtattttatattcttgttcttcaatgtatttttggggagc 1809 ||| | ||| |||| | ||||| | ||| ||||||||||| |||||||| ||||| ||| Sbjct: 122635 gagaggagatctgcttttaagtactatatcttcttgttctttaatgtattcttgggaagc 122576 Query: 1810 attgttacaggatctgctttggagcagct 1838 ||| || ||||||||||||| |||||||| Sbjct: 122575 attattgcaggatctgctttagagcagct 122547 Score = 89.7 bits (45), Expect = 6e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 985 cttgtacggaacataccaccagaccctgatgaatcagttagcgagcttgtggaacatttc 1044 ||||| ||||| ||||| || || |||||||||||| || | |||||||||||||||||| Sbjct: 125131 cttgtgcggaatataccgcctgatcctgatgaatcaattggtgagcttgtggaacatttc 125072 Query: 1045 ttccttgtcaatcatcctgatcattatct 1073 |||||||| || |||||||| |||||||| Sbjct: 125071 ttccttgtaaaccatcctgaccattatct 125043 Score = 77.8 bits (39), Expect = 2e-10 Identities = 39/39 (100%) Strand = Plus / Minus Query: 793 cacagtgatattgacaaactttcaatatccaacatacct 831 ||||||||||||||||||||||||||||||||||||||| Sbjct: 126565 cacagtgatattgacaaactttcaatatccaacatacct 126527 Score = 71.9 bits (36), Expect = 1e-08 Identities = 72/84 (85%) Strand = Plus / Minus Query: 1199 agactggctttcttggatgttttggttctgaagtggatgctattgatcactgcaaatcag 1258 ||||||| |||||||||||||||||||| | |||||||||||||| ||| || ||| | Sbjct: 124509 agactggttttcttggatgttttggttcaaaggtggatgctattgaatactacacatctg 124450 Query: 1259 agattgagaagataggaaaggaag 1282 | ||||||| ||||| |||||||| Sbjct: 124449 aaattgagaggatagaaaaggaag 124426 Score = 67.9 bits (34), Expect = 2e-07 Identities = 82/98 (83%) Strand = Plus / Minus Query: 589 tacttgaagttcttaagctggatgccggctgctctcaagatgcccgaggaggagttgatc 648 ||||||||| ||||||| |||||||| ||||||||||| ||||| ||||| ||||| || Sbjct: 127138 tacttgaaggtcttaagttggatgcctgctgctctcaaaatgccagaggatgagttaatt 127079 Query: 649 gagcatgcgggcctcgattccgttgtctatctacggat 686 ||||| ||||| ||||| | ||||||||| ||||| Sbjct: 127078 agccatgcaggccttgattcagctgtctatctgcggat 127041 Score = 65.9 bits (33), Expect = 8e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 1093 aatgcaaataagcttgctgacctggttgaaaagaagaagaaaatgcggaattggcttgat 1152 |||||||||||||||| | | |||| || ||||||||||||||| ||||||||||||| Sbjct: 124755 aatgcaaataagcttgataagatggtcaaagagaagaagaaaatgcagaattggcttgat 124696 Query: 1153 tacta 1157 ||||| Sbjct: 124695 tacta 124691 Score = 54.0 bits (27), Expect = 0.003 Identities = 39/43 (90%) Strand = Plus / Minus Query: 938 tgcgctttcttgcttcagagaaacgccgaccggatcagttcac 980 ||||||||||||| |||||||| ||||| || ||||||||||| Sbjct: 125859 tgcgctttcttgcatcagagaagcgccgcccagatcagttcac 125817 Score = 46.1 bits (23), Expect = 0.77 Identities = 50/59 (84%) Strand = Plus / Minus Query: 460 gctttcctacggctacagcccatcaacgacaggatcttcttcccgaaatggtacctcaa 518 |||||||| || ||||||||||||||||| ||| | | |||||| || ||||| ||||| Sbjct: 127267 gctttcctgcgactacagcccatcaacgatagggtttacttcccaaagtggtatctcaa 127209
>gb|AY108543.1| Zea mays PCO120949 mRNA sequence Length = 544 Score = 129 bits (65), Expect = 7e-26 Identities = 104/117 (88%) Strand = Plus / Plus Query: 2407 ttcgtgaggaacccgctgcaggaggcgatgaggaaggacacgctggagcacgcgagggag 2466 ||||||||||||||||||||||||||||||| ||||||||| || || | ||| ||||| Sbjct: 131 ttcgtgaggaacccgctgcaggaggcgatgaagaaggacaccctagaacgcgcccgggag 190 Query: 2467 cccaacttcgacctcaagtcgtacctggcggactcgtacctgcacccggtgttcaag 2523 |||||||| || || ||| |||||||||| |||||||||||||||||||||||||| Sbjct: 191 cccaacttggatctgaaggcgtacctggccaactcgtacctgcacccggtgttcaag 247 Score = 73.8 bits (37), Expect = 3e-09 Identities = 55/61 (90%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||||||| |||| |||||||| ||||||||||| ||||||| || |||||| Sbjct: 301 ggaggaggtgatcgtgccgacgaagcggcattcgaggaggacgacgcccgcgcagagcaa 360 Query: 2628 g 2628 | Sbjct: 361 g 361
>gb|DQ430119.1| Sorghum propinquum locus pSB1757 genomic sequence Length = 702 Score = 103 bits (52), Expect = 4e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 2424 gcaggaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaa 2483 |||||||||||||| ||||||||| ||||| | || |||||||||||||||| || || Sbjct: 28 gcaggaggcgatgaagaaggacaccctggaacgtgcccgggagcccaacttcgatctgaa 87 Query: 2484 gtcgtacctggcggactcgtacctgcacccggtgttcaag 2523 | |||||||||| |||||||||||||||||||||||||| Sbjct: 88 ggcgtacctggccaactcgtacctgcacccggtgttcaag 127 Score = 60.0 bits (30), Expect = 5e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||| ||| |||| |||||||| || |||||||| ||||||| || |||||| Sbjct: 181 ggaggaggtgattgtgccgacgaagcggcattcaaggaggacgacgcccgcgcagagcaa 240 Query: 2628 gtacga 2633 | |||| Sbjct: 241 gcacga 246
>gb|DQ430118.1| Sorghum bicolor voucher PI585454 locus pSB1757 genomic sequence Length = 700 Score = 103 bits (52), Expect = 4e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 2424 gcaggaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaa 2483 |||||||||||||| ||||||||| ||||| | || |||||||||||||||| || || Sbjct: 28 gcaggaggcgatgaagaaggacaccctggaacgtgcccgggagcccaacttcgatctgaa 87 Query: 2484 gtcgtacctggcggactcgtacctgcacccggtgttcaag 2523 | |||||||||| |||||||||||||||||||||||||| Sbjct: 88 ggcgtacctggccaactcgtacctgcacccggtgttcaag 127 Score = 60.0 bits (30), Expect = 5e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||| ||| |||| |||||||| || |||||||| ||||||| || |||||| Sbjct: 181 ggaggaggtgattgtgccgacgaagcggcattcaaggaggacgacgcccgcgcagagcaa 240 Query: 2628 gtacga 2633 | |||| Sbjct: 241 gcacga 246
>gb|DQ430117.1| Sorghum bicolor voucher PI267539 locus pSB1757 genomic sequence Length = 700 Score = 103 bits (52), Expect = 4e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 2424 gcaggaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaa 2483 |||||||||||||| ||||||||| ||||| | || |||||||||||||||| || || Sbjct: 28 gcaggaggcgatgaagaaggacaccctggaacgtgcccgggagcccaacttcgatctgaa 87 Query: 2484 gtcgtacctggcggactcgtacctgcacccggtgttcaag 2523 | |||||||||| |||||||||||||||||||||||||| Sbjct: 88 ggcgtacctggccaactcgtacctgcacccggtgttcaag 127 Score = 60.0 bits (30), Expect = 5e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||| ||| |||| |||||||| || |||||||| ||||||| || |||||| Sbjct: 181 ggaggaggtgattgtgccgacgaagcggcattcaaggaggacgacgcccgcgcagagcaa 240 Query: 2628 gtacga 2633 | |||| Sbjct: 241 gcacga 246
>gb|DQ430116.1| Sorghum bicolor voucher PI267408 locus pSB1757 genomic sequence Length = 701 Score = 103 bits (52), Expect = 4e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 2424 gcaggaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaa 2483 |||||||||||||| ||||||||| ||||| | || |||||||||||||||| || || Sbjct: 28 gcaggaggcgatgaagaaggacaccctggaacgtgcccgggagcccaacttcgatctgaa 87 Query: 2484 gtcgtacctggcggactcgtacctgcacccggtgttcaag 2523 | |||||||||| |||||||||||||||||||||||||| Sbjct: 88 ggcgtacctggccaactcgtacctgcacccggtgttcaag 127 Score = 60.0 bits (30), Expect = 5e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||| ||| |||| |||||||| || |||||||| ||||||| || |||||| Sbjct: 181 ggaggaggtgattgtgccgacgaagcggcattcaaggaggacgacgcccgcgcagagcaa 240 Query: 2628 gtacga 2633 | |||| Sbjct: 241 gcacga 246
>gb|DQ430115.1| Sorghum bicolor voucher PI152702 locus pSB1757 genomic sequence Length = 701 Score = 103 bits (52), Expect = 4e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 2424 gcaggaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaa 2483 |||||||||||||| ||||||||| ||||| | || |||||||||||||||| || || Sbjct: 28 gcaggaggcgatgaagaaggacaccctggaacgtgcccgggagcccaacttcgatctgaa 87 Query: 2484 gtcgtacctggcggactcgtacctgcacccggtgttcaag 2523 | |||||||||| |||||||||||||||||||||||||| Sbjct: 88 ggcgtacctggccaactcgtacctgcacccggtgttcaag 127 Score = 60.0 bits (30), Expect = 5e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||| ||| |||| |||||||| || |||||||| ||||||| || |||||| Sbjct: 181 ggaggaggtgattgtgccgacgaagcggcattcaaggaggacgacgcccgcgcagagcaa 240 Query: 2628 gtacga 2633 | |||| Sbjct: 241 gcacga 246
>gb|DQ430114.1| Sorghum bicolor voucher NSL92371 locus pSB1757 genomic sequence Length = 701 Score = 103 bits (52), Expect = 4e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 2424 gcaggaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaa 2483 |||||||||||||| ||||||||| ||||| | || |||||||||||||||| || || Sbjct: 28 gcaggaggcgatgaagaaggacaccctggaacgtgcccgggagcccaacttcgatctgaa 87 Query: 2484 gtcgtacctggcggactcgtacctgcacccggtgttcaag 2523 | |||||||||| |||||||||||||||||||||||||| Sbjct: 88 ggcgtacctggccaactcgtacctgcacccggtgttcaag 127 Score = 60.0 bits (30), Expect = 5e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||| ||| |||| |||||||| || |||||||| ||||||| || |||||| Sbjct: 181 ggaggaggtgattgtgccgacgaagcggcattcaaggaggacgacgcccgcgcagagcaa 240 Query: 2628 gtacga 2633 | |||| Sbjct: 241 gcacga 246
>gb|DQ430113.1| Sorghum bicolor voucher NSL87902 locus pSB1757 genomic sequence Length = 700 Score = 103 bits (52), Expect = 4e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 2424 gcaggaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaa 2483 |||||||||||||| ||||||||| ||||| | || |||||||||||||||| || || Sbjct: 28 gcaggaggcgatgaagaaggacaccctggaacgtgcccgggagcccaacttcgatctgaa 87 Query: 2484 gtcgtacctggcggactcgtacctgcacccggtgttcaag 2523 | |||||||||| |||||||||||||||||||||||||| Sbjct: 88 ggcgtacctggccaactcgtacctgcacccggtgttcaag 127 Score = 60.0 bits (30), Expect = 5e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||| ||| |||| |||||||| || |||||||| ||||||| || |||||| Sbjct: 181 ggaggaggtgattgtgccgacgaagcggcattcaaggaggacgacgcccgcgcagagcaa 240 Query: 2628 gtacga 2633 | |||| Sbjct: 241 gcacga 246
>gb|DQ430112.1| Sorghum bicolor voucher NSL87666 locus pSB1757 genomic sequence Length = 701 Score = 103 bits (52), Expect = 4e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 2424 gcaggaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaa 2483 |||||||||||||| ||||||||| ||||| | || |||||||||||||||| || || Sbjct: 28 gcaggaggcgatgaagaaggacaccctggaacgtgcccgggagcccaacttcgatctgaa 87 Query: 2484 gtcgtacctggcggactcgtacctgcacccggtgttcaag 2523 | |||||||||| |||||||||||||||||||||||||| Sbjct: 88 ggcgtacctggccaactcgtacctgcacccggtgttcaag 127 Score = 60.0 bits (30), Expect = 5e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||| ||| |||| |||||||| || |||||||| ||||||| || |||||| Sbjct: 181 ggaggaggtgattgtgccgacgaagcggcattcaaggaggacgacgcccgcgcagagcaa 240 Query: 2628 gtacga 2633 | |||| Sbjct: 241 gcacga 246
>gb|DQ430111.1| Sorghum bicolor voucher NSL77217 locus pSB1757 genomic sequence Length = 701 Score = 103 bits (52), Expect = 4e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 2424 gcaggaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaa 2483 |||||||||||||| ||||||||| ||||| | || |||||||||||||||| || || Sbjct: 28 gcaggaggcgatgaagaaggacaccctggaacgtgcccgggagcccaacttcgatctgaa 87 Query: 2484 gtcgtacctggcggactcgtacctgcacccggtgttcaag 2523 | |||||||||| |||||||||||||||||||||||||| Sbjct: 88 ggcgtacctggccaactcgtacctgcacccggtgttcaag 127 Score = 60.0 bits (30), Expect = 5e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||| ||| |||| |||||||| || |||||||| ||||||| || |||||| Sbjct: 181 ggaggaggtgattgtgccgacgaagcggcattcaaggaggacgacgcccgcgcagagcaa 240 Query: 2628 gtacga 2633 | |||| Sbjct: 241 gcacga 246
>gb|DQ430110.1| Sorghum bicolor voucher NSL77034 locus pSB1757 genomic sequence Length = 701 Score = 103 bits (52), Expect = 4e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 2424 gcaggaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaa 2483 |||||||||||||| ||||||||| ||||| | || |||||||||||||||| || || Sbjct: 28 gcaggaggcgatgaagaaggacaccctggaacgtgcccgggagcccaacttcgatctgaa 87 Query: 2484 gtcgtacctggcggactcgtacctgcacccggtgttcaag 2523 | |||||||||| |||||||||||||||||||||||||| Sbjct: 88 ggcgtacctggccaactcgtacctgcacccggtgttcaag 127 Score = 60.0 bits (30), Expect = 5e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||| ||| |||| |||||||| || |||||||| ||||||| || |||||| Sbjct: 181 ggaggaggtgattgtgccgacgaagcggcattcaaggaggacgacgcccgcgcagagcaa 240 Query: 2628 gtacga 2633 | |||| Sbjct: 241 gcacga 246
>gb|DQ430109.1| Sorghum bicolor voucher NSL56174 locus pSB1757 genomic sequence Length = 701 Score = 103 bits (52), Expect = 4e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 2424 gcaggaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaa 2483 |||||||||||||| ||||||||| ||||| | || |||||||||||||||| || || Sbjct: 28 gcaggaggcgatgaagaaggacaccctggaacgtgcccgggagcccaacttcgatctgaa 87 Query: 2484 gtcgtacctggcggactcgtacctgcacccggtgttcaag 2523 | |||||||||| |||||||||||||||||||||||||| Sbjct: 88 ggcgtacctggccaactcgtacctgcacccggtgttcaag 127 Score = 60.0 bits (30), Expect = 5e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||| ||| |||| |||||||| || |||||||| ||||||| || |||||| Sbjct: 181 ggaggaggtgattgtgccgacgaagcggcattcaaggaggacgacgcccgcgcagagcaa 240 Query: 2628 gtacga 2633 | |||| Sbjct: 241 gcacga 246
>gb|DQ430108.1| Sorghum bicolor voucher NSL56003 locus pSB1757 genomic sequence Length = 701 Score = 103 bits (52), Expect = 4e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 2424 gcaggaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaa 2483 |||||||||||||| ||||||||| ||||| | || |||||||||||||||| || || Sbjct: 28 gcaggaggcgatgaagaaggacaccctggaacgtgcccgggagcccaacttcgatctgaa 87 Query: 2484 gtcgtacctggcggactcgtacctgcacccggtgttcaag 2523 | |||||||||| |||||||||||||||||||||||||| Sbjct: 88 ggcgtacctggccaactcgtacctgcacccggtgttcaag 127 Score = 60.0 bits (30), Expect = 5e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||| ||| |||| |||||||| || |||||||| ||||||| || |||||| Sbjct: 181 ggaggaggtgattgtgccgacgaagcggcattcaaggaggacgacgcccgcgcagagcaa 240 Query: 2628 gtacga 2633 | |||| Sbjct: 241 gcacga 246
>gb|DQ430107.1| Sorghum bicolor voucher NSL55243 locus pSB1757 genomic sequence Length = 701 Score = 103 bits (52), Expect = 4e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 2424 gcaggaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaa 2483 |||||||||||||| ||||||||| ||||| | || |||||||||||||||| || || Sbjct: 28 gcaggaggcgatgaagaaggacaccctggaacgtgcccgggagcccaacttcgatctgaa 87 Query: 2484 gtcgtacctggcggactcgtacctgcacccggtgttcaag 2523 | |||||||||| |||||||||||||||||||||||||| Sbjct: 88 ggcgtacctggccaactcgtacctgcacccggtgttcaag 127 Score = 60.0 bits (30), Expect = 5e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||| ||| |||| |||||||| || |||||||| ||||||| || |||||| Sbjct: 181 ggaggaggtgattgtgccgacgaagcggcattcaaggaggacgacgcccgcgcagagcaa 240 Query: 2628 gtacga 2633 | |||| Sbjct: 241 gcacga 246
>gb|DQ430106.1| Sorghum bicolor voucher NSL51365 locus pSB1757 genomic sequence Length = 701 Score = 103 bits (52), Expect = 4e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 2424 gcaggaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaa 2483 |||||||||||||| ||||||||| ||||| | || |||||||||||||||| || || Sbjct: 28 gcaggaggcgatgaagaaggacaccctggaacgtgcccgggagcccaacttcgatctgaa 87 Query: 2484 gtcgtacctggcggactcgtacctgcacccggtgttcaag 2523 | |||||||||| |||||||||||||||||||||||||| Sbjct: 88 ggcgtacctggccaactcgtacctgcacccggtgttcaag 127 Score = 60.0 bits (30), Expect = 5e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||| ||| |||| |||||||| || |||||||| ||||||| || |||||| Sbjct: 181 ggaggaggtgattgtgccgacgaagcggcattcaaggaggacgacgcccgcgcagagcaa 240 Query: 2628 gtacga 2633 | |||| Sbjct: 241 gcacga 246
>gb|DQ430105.1| Sorghum bicolor voucher NSL51030 locus pSB1757 genomic sequence Length = 700 Score = 103 bits (52), Expect = 4e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 2424 gcaggaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaa 2483 |||||||||||||| ||||||||| ||||| | || |||||||||||||||| || || Sbjct: 28 gcaggaggcgatgaagaaggacaccctggaacgtgcccgggagcccaacttcgatctgaa 87 Query: 2484 gtcgtacctggcggactcgtacctgcacccggtgttcaag 2523 | |||||||||| |||||||||||||||||||||||||| Sbjct: 88 ggcgtacctggccaactcgtacctgcacccggtgttcaag 127 Score = 60.0 bits (30), Expect = 5e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||| ||| |||| |||||||| || |||||||| ||||||| || |||||| Sbjct: 181 ggaggaggtgattgtgccgacgaagcggcattcaaggaggacgacgcccgcgcagagcaa 240 Query: 2628 gtacga 2633 | |||| Sbjct: 241 gcacga 246
>gb|DQ430104.1| Sorghum bicolor voucher NSL50875 locus pSB1757 genomic sequence Length = 700 Score = 103 bits (52), Expect = 4e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 2424 gcaggaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaa 2483 |||||||||||||| ||||||||| ||||| | || |||||||||||||||| || || Sbjct: 28 gcaggaggcgatgaagaaggacaccctggaacgtgcccgggagcccaacttcgatctgaa 87 Query: 2484 gtcgtacctggcggactcgtacctgcacccggtgttcaag 2523 | |||||||||| |||||||||||||||||||||||||| Sbjct: 88 ggcgtacctggccaactcgtacctgcacccggtgttcaag 127 Score = 60.0 bits (30), Expect = 5e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||| ||| |||| |||||||| || |||||||| ||||||| || |||||| Sbjct: 181 ggaggaggtgattgtgccgacgaagcggcattcaaggaggacgacgcccgcgcagagcaa 240 Query: 2628 gtacga 2633 | |||| Sbjct: 241 gcacga 246
>gb|DQ430103.1| Sorghum bicolor voucher BTx623 locus pSB1757 genomic sequence Length = 701 Score = 103 bits (52), Expect = 4e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 2424 gcaggaggcgatgaggaaggacacgctggagcacgcgagggagcccaacttcgacctcaa 2483 |||||||||||||| ||||||||| ||||| | || |||||||||||||||| || || Sbjct: 28 gcaggaggcgatgaagaaggacaccctggaacgtgcccgggagcccaacttcgatctgaa 87 Query: 2484 gtcgtacctggcggactcgtacctgcacccggtgttcaag 2523 | |||||||||| |||||||||||||||||||||||||| Sbjct: 88 ggcgtacctggccaactcgtacctgcacccggtgttcaag 127 Score = 60.0 bits (30), Expect = 5e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 2568 ggaggaggtgatcgtggcgaccaagcggcagtcgaggaggaccacgcccgtgccgagcaa 2627 |||||||||||| ||| |||| |||||||| || |||||||| ||||||| || |||||| Sbjct: 181 ggaggaggtgattgtgccgacgaagcggcattcaaggaggacgacgcccgcgcagagcaa 240 Query: 2628 gtacga 2633 | |||| Sbjct: 241 gcacga 246
>dbj|AP006535.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT02D13, TM0546, complete sequence Length = 107979 Score = 91.7 bits (46), Expect = 1e-14 Identities = 103/122 (84%) Strand = Plus / Plus Query: 1324 attatgccagcagcctttgtttcttttcgttcacggtggggtgcagctgtttgtgctcag 1383 ||||||||||| || |||||||| || || | || |||||||||||||||||||| || Sbjct: 44888 attatgccagctgcatttgtttccttccgaactcgctggggtgcagctgtttgtgcacaa 44947 Query: 1384 acacaacaaacaagcaacccaaccctttggctgactgaatgggctccagaacctcgtgat 1443 || |||||||| || |||||||| | ||| ||||||| |||||||||||||||||||| Sbjct: 44948 actcaacaaaccagaaacccaactatatggttgactgagggggctccagaacctcgtgat 45007 Query: 1444 gt 1445 || Sbjct: 45008 gt 45009 Score = 58.0 bits (29), Expect = 2e-04 Identities = 44/49 (89%) Strand = Plus / Plus Query: 998 taccaccagaccctgatgaatcagttagcgagcttgtggaacatttctt 1046 ||||||| || |||||||||||||| || ||||| |||||||||||||| Sbjct: 43430 taccacctgatcctgatgaatcagtaagtgagctagtggaacatttctt 43478 Score = 50.1 bits (25), Expect = 0.049 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1999 aaaaactttttcttggtcaagacggagaaggacagagaagaggcaatggatcc 2051 |||||||| |||||||| ||||| || |||||| | ||||| ||||||||||| Sbjct: 46693 aaaaacttcttcttggtgaagactgaaaaggaccgcgaagaagcaatggatcc 46745 Score = 46.1 bits (23), Expect = 0.77 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1123 aagaagaagaaaatgcggaattggcttgattacta 1157 ||||||||||||| || |||||||||||| ||||| Sbjct: 44355 aagaagaagaaaaagcagaattggcttgactacta 44389
>ref|NM_118333.2| Arabidopsis thaliana unknown protein (AT4G22120) mRNA, complete cds Length = 2572 Score = 87.7 bits (44), Expect = 2e-13 Identities = 182/228 (79%) Strand = Plus / Plus Query: 1307 tgaaggatcccaagtcaattatgccagcagcctttgtttcttttcgttcacggtggggtg 1366 |||| ||||| ||| | |||||||||||||| ||||| || ||| |||| |||| || Sbjct: 1042 tgaatgatcctaaggccattatgccagcagcgtttgtctcctttaaaacacgatgggctg 1101 Query: 1367 cagctgtttgtgctcagacacaacaaacaagcaacccaaccctttggctgactgaatggg 1426 | || |||||||||||||| ||||| || | |||||||||| |||||||| ||||||| Sbjct: 1102 ctgcggtttgtgctcagactcaacagacccgaaacccaacccaatggctgaccgaatggg 1161 Query: 1427 ctccagaacctcgtgatgtctactggagtaatctatctattccctttgtctccctgacgg 1486 |||||||||| |||||||| | ||| ||||| ||||||| | ||| || ||||| | Sbjct: 1162 ctccagaaccgcgtgatgtgttttggtcaaatcttgctattccatatgtttctctgacag 1221 Query: 1487 tcaggaggttgataattggcgtggccttcttcttcctcaacttcttct 1534 | ||||||||||| || || |||||||||||||| | |||||||| Sbjct: 1222 taaggaggttgatcatgcatgttgccttcttcttcctaaccttcttct 1269 Score = 73.8 bits (37), Expect = 3e-09 Identities = 157/197 (79%) Strand = Plus / Plus Query: 964 cgaccggatcagttcactgttcttgtacggaacataccaccagaccctgatgaatcagtt 1023 ||||| || ||||||||||| ||||| |||| |||| || ||| | |||||||| || Sbjct: 696 cgacctgaccagttcactgtccttgttaggaatgtacctccggacgcagatgaatctgta 755 Query: 1024 agcgagcttgtggaacatttcttccttgtcaatcatcctgatcattatctgaaacatcag 1083 || || || || || ||||| ||||| ||||||||||||||||| || || | ||||||| Sbjct: 756 agtgaactggtagagcattttttcctggtcaatcatcctgatcactacctaacacatcag 815 Query: 1084 acagtttacaatgcaaataagcttgctgacctggttgaaaagaagaagaaaatgcggaat 1143 || | ||||||||| ||||| || || |||| |||||||||| || ||| |||| Sbjct: 816 gttgtatgcaatgcaaacaagctggccgatttggtgaaaaagaagaaaaagctgcagaat 875 Query: 1144 tggcttgattactacca 1160 ||||||||||||||||| Sbjct: 876 tggcttgattactacca 892
>gb|BT020529.1| Arabidopsis thaliana At4g22120 mRNA, complete cds Length = 2316 Score = 87.7 bits (44), Expect = 2e-13 Identities = 182/228 (79%) Strand = Plus / Plus Query: 1307 tgaaggatcccaagtcaattatgccagcagcctttgtttcttttcgttcacggtggggtg 1366 |||| ||||| ||| | |||||||||||||| ||||| || ||| |||| |||| || Sbjct: 938 tgaatgatcctaaggccattatgccagcagcgtttgtctcctttaaaacacgatgggctg 997 Query: 1367 cagctgtttgtgctcagacacaacaaacaagcaacccaaccctttggctgactgaatggg 1426 | || |||||||||||||| ||||| || | |||||||||| |||||||| ||||||| Sbjct: 998 ctgcggtttgtgctcagactcaacagacccgaaacccaacccaatggctgaccgaatggg 1057 Query: 1427 ctccagaacctcgtgatgtctactggagtaatctatctattccctttgtctccctgacgg 1486 |||||||||| |||||||| | ||| ||||| ||||||| | ||| || ||||| | Sbjct: 1058 ctccagaaccgcgtgatgtgttttggtcaaatcttgctattccatatgtttctctgacag 1117 Query: 1487 tcaggaggttgataattggcgtggccttcttcttcctcaacttcttct 1534 | ||||||||||| || || |||||||||||||| | |||||||| Sbjct: 1118 taaggaggttgatcatgcatgttgccttcttcttcctaaccttcttct 1165 Score = 73.8 bits (37), Expect = 3e-09 Identities = 157/197 (79%) Strand = Plus / Plus Query: 964 cgaccggatcagttcactgttcttgtacggaacataccaccagaccctgatgaatcagtt 1023 ||||| || ||||||||||| ||||| |||| |||| || ||| | |||||||| || Sbjct: 592 cgacctgaccagttcactgtccttgttaggaatgtacctccggacgcagatgaatctgta 651 Query: 1024 agcgagcttgtggaacatttcttccttgtcaatcatcctgatcattatctgaaacatcag 1083 || || || || || ||||| ||||| ||||||||||||||||| || || | ||||||| Sbjct: 652 agtgaactggtagagcattttttcctggtcaatcatcctgatcactacctaacacatcag 711 Query: 1084 acagtttacaatgcaaataagcttgctgacctggttgaaaagaagaagaaaatgcggaat 1143 || | ||||||||| ||||| || || |||| |||||||||| || ||| |||| Sbjct: 712 gttgtatgcaatgcaaacaagctggccgatttggtgaaaaagaagaaaaagctgcagaat 771 Query: 1144 tggcttgattactacca 1160 ||||||||||||||||| Sbjct: 772 tggcttgattactacca 788
>gb|BT015821.1| Arabidopsis thaliana At4g22120 gene, complete cds Length = 2532 Score = 87.7 bits (44), Expect = 2e-13 Identities = 182/228 (79%) Strand = Plus / Plus Query: 1307 tgaaggatcccaagtcaattatgccagcagcctttgtttcttttcgttcacggtggggtg 1366 |||| ||||| ||| | |||||||||||||| ||||| || ||| |||| |||| || Sbjct: 1004 tgaatgatcctaaggccattatgccagcagcgtttgtctcctttaaaacacgatgggctg 1063 Query: 1367 cagctgtttgtgctcagacacaacaaacaagcaacccaaccctttggctgactgaatggg 1426 | || |||||||||||||| ||||| || | |||||||||| |||||||| ||||||| Sbjct: 1064 ctgcggtttgtgctcagactcaacagacccgaaacccaacccaatggctgaccgaatggg 1123 Query: 1427 ctccagaacctcgtgatgtctactggagtaatctatctattccctttgtctccctgacgg 1486 |||||||||| |||||||| | ||| ||||| ||||||| | ||| || ||||| | Sbjct: 1124 ctccagaaccgcgtgatgtgttttggtcaaatcttgctattccatatgtttctctgacag 1183 Query: 1487 tcaggaggttgataattggcgtggccttcttcttcctcaacttcttct 1534 | ||||||||||| || || |||||||||||||| | |||||||| Sbjct: 1184 taaggaggttgatcatgcatgttgccttcttcttcctaaccttcttct 1231 Score = 73.8 bits (37), Expect = 3e-09 Identities = 157/197 (79%) Strand = Plus / Plus Query: 964 cgaccggatcagttcactgttcttgtacggaacataccaccagaccctgatgaatcagtt 1023 ||||| || ||||||||||| ||||| |||| |||| || ||| | |||||||| || Sbjct: 658 cgacctgaccagttcactgtccttgttaggaatgtacctccggacgcagatgaatctgta 717 Query: 1024 agcgagcttgtggaacatttcttccttgtcaatcatcctgatcattatctgaaacatcag 1083 || || || || || ||||| ||||| ||||||||||||||||| || || | ||||||| Sbjct: 718 agtgaactggtagagcattttttcctggtcaatcatcctgatcactacctaacacatcag 777 Query: 1084 acagtttacaatgcaaataagcttgctgacctggttgaaaagaagaagaaaatgcggaat 1143 || | ||||||||| ||||| || || |||| |||||||||| || ||| |||| Sbjct: 778 gttgtatgcaatgcaaacaagctggccgatttggtgaaaaagaagaaaaagctgcagaat 837 Query: 1144 tggcttgattactacca 1160 ||||||||||||||||| Sbjct: 838 tggcttgattactacca 854
>dbj|AK221219.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL23-16-B18 Length = 3148 Score = 87.7 bits (44), Expect = 2e-13 Identities = 182/228 (79%) Strand = Plus / Plus Query: 1307 tgaaggatcccaagtcaattatgccagcagcctttgtttcttttcgttcacggtggggtg 1366 |||| ||||| ||| | |||||||||||||| ||||| || ||| |||| |||| || Sbjct: 1560 tgaatgatcctaaggccattatgccagcagcgtttgtctcctttaaaacacgatgggctg 1619 Query: 1367 cagctgtttgtgctcagacacaacaaacaagcaacccaaccctttggctgactgaatggg 1426 | || |||||||||||||| ||||| || | |||||||||| |||||||| ||||||| Sbjct: 1620 ctgcggtttgtgctcagactcaacagacccgaaacccaacccaatggctgaccgaatggg 1679 Query: 1427 ctccagaacctcgtgatgtctactggagtaatctatctattccctttgtctccctgacgg 1486 |||||||||| |||||||| | ||| ||||| ||||||| | ||| || ||||| | Sbjct: 1680 ctccagaaccgcgtgatgtgttttggtcaaatcttgctattccatatgtttctctgacag 1739 Query: 1487 tcaggaggttgataattggcgtggccttcttcttcctcaacttcttct 1534 | ||||||||||| || || |||||||||||||| | |||||||| Sbjct: 1740 taaggaggttgatcatgcatgttgccttcttcttcctaaccttcttct 1787 Score = 73.8 bits (37), Expect = 3e-09 Identities = 157/197 (79%) Strand = Plus / Plus Query: 964 cgaccggatcagttcactgttcttgtacggaacataccaccagaccctgatgaatcagtt 1023 ||||| || ||||||||||| ||||| |||| |||| || ||| | |||||||| || Sbjct: 1214 cgacctgaccagttcactgtccttgttaggaatgtacctccggacgcagatgaatctgta 1273 Query: 1024 agcgagcttgtggaacatttcttccttgtcaatcatcctgatcattatctgaaacatcag 1083 || || || || || ||||| ||||| ||||||||||||||||| || || | ||||||| Sbjct: 1274 agtgaactggtagagcattttttcctggtcaatcatcctgatcactacctaacacatcag 1333 Query: 1084 acagtttacaatgcaaataagcttgctgacctggttgaaaagaagaagaaaatgcggaat 1143 || | ||||||||| ||||| || || |||| |||||||||| || ||| |||| Sbjct: 1334 gttgtatgcaatgcaaacaagctggccgatttggtgaaaaagaagaaaaagctgcagaat 1393 Query: 1144 tggcttgattactacca 1160 ||||||||||||||||| Sbjct: 1394 tggcttgattactacca 1410
>emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 56 Length = 196247 Score = 87.7 bits (44), Expect = 2e-13 Identities = 182/228 (79%) Strand = Plus / Minus Query: 1307 tgaaggatcccaagtcaattatgccagcagcctttgtttcttttcgttcacggtggggtg 1366 |||| ||||| ||| | |||||||||||||| ||||| || ||| |||| |||| || Sbjct: 145569 tgaatgatcctaaggccattatgccagcagcgtttgtctcctttaaaacacgatgggctg 145510 Query: 1367 cagctgtttgtgctcagacacaacaaacaagcaacccaaccctttggctgactgaatggg 1426 | || |||||||||||||| ||||| || | |||||||||| |||||||| ||||||| Sbjct: 145509 ctgcggtttgtgctcagactcaacagacccgaaacccaacccaatggctgaccgaatggg 145450 Query: 1427 ctccagaacctcgtgatgtctactggagtaatctatctattccctttgtctccctgacgg 1486 |||||||||| |||||||| | ||| ||||| ||||||| | ||| || ||||| | Sbjct: 145449 ctccagaaccgcgtgatgtgttttggtcaaatcttgctattccatatgtttctctgacag 145390 Query: 1487 tcaggaggttgataattggcgtggccttcttcttcctcaacttcttct 1534 | ||||||||||| || || |||||||||||||| | |||||||| Sbjct: 145389 taaggaggttgatcatgcatgttgccttcttcttcctaaccttcttct 145342 Score = 50.1 bits (25), Expect = 0.049 Identities = 58/69 (84%) Strand = Plus / Minus Query: 1092 caatgcaaataagcttgctgacctggttgaaaagaagaagaaaatgcggaattggcttga 1151 ||||||||| ||||| || || |||| |||||||||| || ||| |||||||||||| Sbjct: 145869 caatgcaaacaagctggccgatttggtgaaaaagaagaaaaagctgcagaattggcttga 145810 Query: 1152 ttactacca 1160 ||||||||| Sbjct: 145809 ttactacca 145801 Score = 44.1 bits (22), Expect = 3.1 Identities = 34/38 (89%) Strand = Plus / Minus Query: 2190 tcagatcattaatgtctacaatcaacgatacgagagtg 2227 |||||||||||| || ||||||||| ||||||||||| Sbjct: 144517 tcagatcattaacgtatacaatcaagaatacgagagtg 144480
>emb|AL022140.1|ATF1N20 Arabidopsis thaliana DNA chromosome 4, BAC clone F1N20 (ESSA project) Length = 103270 Score = 87.7 bits (44), Expect = 2e-13 Identities = 182/228 (79%) Strand = Plus / Minus Query: 1307 tgaaggatcccaagtcaattatgccagcagcctttgtttcttttcgttcacggtggggtg 1366 |||| ||||| ||| | |||||||||||||| ||||| || ||| |||| |||| || Sbjct: 91250 tgaatgatcctaaggccattatgccagcagcgtttgtctcctttaaaacacgatgggctg 91191 Query: 1367 cagctgtttgtgctcagacacaacaaacaagcaacccaaccctttggctgactgaatggg 1426 | || |||||||||||||| ||||| || | |||||||||| |||||||| ||||||| Sbjct: 91190 ctgcggtttgtgctcagactcaacagacccgaaacccaacccaatggctgaccgaatggg 91131 Query: 1427 ctccagaacctcgtgatgtctactggagtaatctatctattccctttgtctccctgacgg 1486 |||||||||| |||||||| | ||| ||||| ||||||| | ||| || ||||| | Sbjct: 91130 ctccagaaccgcgtgatgtgttttggtcaaatcttgctattccatatgtttctctgacag 91071 Query: 1487 tcaggaggttgataattggcgtggccttcttcttcctcaacttcttct 1534 | ||||||||||| || || |||||||||||||| | |||||||| Sbjct: 91070 taaggaggttgatcatgcatgttgccttcttcttcctaaccttcttct 91023 Score = 50.1 bits (25), Expect = 0.049 Identities = 58/69 (84%) Strand = Plus / Minus Query: 1092 caatgcaaataagcttgctgacctggttgaaaagaagaagaaaatgcggaattggcttga 1151 ||||||||| ||||| || || |||| |||||||||| || ||| |||||||||||| Sbjct: 91550 caatgcaaacaagctggccgatttggtgaaaaagaagaaaaagctgcagaattggcttga 91491 Query: 1152 ttactacca 1160 ||||||||| Sbjct: 91490 ttactacca 91482 Score = 44.1 bits (22), Expect = 3.1 Identities = 34/38 (89%) Strand = Plus / Minus Query: 2190 tcagatcattaatgtctacaatcaacgatacgagagtg 2227 |||||||||||| || ||||||||| ||||||||||| Sbjct: 90198 tcagatcattaacgtatacaatcaagaatacgagagtg 90161
>emb|BX826369.1|CNS0A2H1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB1ZD10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2576 Score = 87.7 bits (44), Expect = 2e-13 Identities = 182/228 (79%) Strand = Plus / Plus Query: 1307 tgaaggatcccaagtcaattatgccagcagcctttgtttcttttcgttcacggtggggtg 1366 |||| ||||| ||| | |||||||||||||| ||||| || ||| |||| |||| || Sbjct: 1043 tgaatgatcctaaggccattatgccagcagcgtttgtctcctttaaaacacgatgggctg 1102 Query: 1367 cagctgtttgtgctcagacacaacaaacaagcaacccaaccctttggctgactgaatggg 1426 | || |||||||||||||| ||||| || | |||||||||| |||||||| ||||||| Sbjct: 1103 ctgcggtttgtgctcagactcaacagacccgaaacccaacccaatggctgaccgaatggg 1162 Query: 1427 ctccagaacctcgtgatgtctactggagtaatctatctattccctttgtctccctgacgg 1486 |||||||||| |||||||| | ||| ||||| ||||||| | ||| || ||||| | Sbjct: 1163 ctccagaaccgcgtgatgtgttttggtcaaatcttgctattccatatgtttctctgacag 1222 Query: 1487 tcaggaggttgataattggcgtggccttcttcttcctcaacttcttct 1534 | ||||||||||| || || |||||||||||||| | |||||||| Sbjct: 1223 taaggaggttgatcatgcatgttgccttcttcttcctaaccttcttct 1270 Score = 73.8 bits (37), Expect = 3e-09 Identities = 157/197 (79%) Strand = Plus / Plus Query: 964 cgaccggatcagttcactgttcttgtacggaacataccaccagaccctgatgaatcagtt 1023 ||||| || ||||||||||| ||||| |||| |||| || ||| | |||||||| || Sbjct: 697 cgacctgaccagttcactgtccttgtcaggaatgtacctccggacgcagatgaatctgta 756 Query: 1024 agcgagcttgtggaacatttcttccttgtcaatcatcctgatcattatctgaaacatcag 1083 || || || || || ||||| ||||| ||||||||||||||||| || || | ||||||| Sbjct: 757 agtgaactggtagagcattttttcctggtcaatcatcctgatcactacctaacacatcag 816 Query: 1084 acagtttacaatgcaaataagcttgctgacctggttgaaaagaagaagaaaatgcggaat 1143 || | ||||||||| ||||| || || |||| |||||||||| || ||| |||| Sbjct: 817 gttgtatgcaatgcaaacaagctggccgatttggtgaaaaagaagaaaaagctgcagaat 876 Query: 1144 tggcttgattactacca 1160 ||||||||||||||||| Sbjct: 877 tggcttgattactacca 893
>gb|BT013808.1| Lycopersicon esculentum clone 132729F, mRNA sequence Length = 2674 Score = 83.8 bits (42), Expect = 4e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1990 taccacttgaaaaactttttcttggtcaagacggagaaggacagagaagaggcaatggat 2049 ||||||||||| |||||||||||||| |||||||| || || |||||||||||||||||| Sbjct: 1666 taccacttgaagaactttttcttggttaagacggaaaaagatagagaagaggcaatggat 1725 Query: 2050 cc 2051 || Sbjct: 1726 cc 1727 Score = 65.9 bits (33), Expect = 8e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 1357 cggtggggtgcagctgtttgtgctcagacacaacaaacaagcaacccaaccctttggctg 1416 ||||||||||| ||||||||||| || ||||| ||| | || || |||||| | ||| || Sbjct: 1033 cggtggggtgctgctgtttgtgcacaaacacagcaatccagaaatccaaccttgtggttg 1092 Query: 1417 actgaatgggctccagaacctcgtgatgt 1445 || |||||||||||||| || |||||||| Sbjct: 1093 acagaatgggctccagagccacgtgatgt 1121 Score = 58.0 bits (29), Expect = 2e-04 Identities = 59/69 (85%) Strand = Plus / Plus Query: 1639 ttcatccaagggtttcttcctggacttgctctgaagatcttcctcatagtgcttccaact 1698 ||||||||||| ||||| ||||| ||||| |||||||||| |||||| | || |||||| Sbjct: 1315 ttcatccaaggttttctacctgggattgctttgaagatctttctcatatttctgccaact 1374 Query: 1699 atactgatg 1707 ||| ||||| Sbjct: 1375 atattgatg 1383
>ref|NM_113057.1| Arabidopsis thaliana unknown protein (AT3G21620) mRNA, complete cds Length = 2271 Score = 67.9 bits (34), Expect = 2e-07 Identities = 64/74 (86%) Strand = Plus / Plus Query: 973 cagttcactgttcttgtacggaacataccaccagaccctgatgaatcagttagcgagctt 1032 ||||| |||||||||||| ||||||| || ||||| |||||||||||||| || ||||| Sbjct: 592 cagtttactgttcttgtaaggaacattcctccagatcctgatgaatcagtaagtgagctc 651 Query: 1033 gtggaacatttctt 1046 || || |||||||| Sbjct: 652 gttgagcatttctt 665 Score = 50.1 bits (25), Expect = 0.049 Identities = 28/29 (96%) Strand = Plus / Plus Query: 2023 gagaaggacagagaagaggcaatggatcc 2051 ||||||||||||||||| ||||||||||| Sbjct: 1645 gagaaggacagagaagaagcaatggatcc 1673 Score = 48.1 bits (24), Expect = 0.20 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1131 gaaaatgcggaattggcttgattactaccaaaacaa 1166 |||| ||| |||||||||||||||||| |||||||| Sbjct: 750 gaaattgcagaattggcttgattactatcaaaacaa 785
>dbj|AK220939.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-52-J03 Length = 2555 Score = 67.9 bits (34), Expect = 2e-07 Identities = 64/74 (86%) Strand = Plus / Plus Query: 973 cagttcactgttcttgtacggaacataccaccagaccctgatgaatcagttagcgagctt 1032 ||||| |||||||||||| ||||||| || ||||| |||||||||||||| || ||||| Sbjct: 779 cagtttactgttcttgtaaggaacattcctccagatcctgatgaatcagtaagtgagctc 838 Query: 1033 gtggaacatttctt 1046 || || |||||||| Sbjct: 839 gttgagcatttctt 852 Score = 50.1 bits (25), Expect = 0.049 Identities = 28/29 (96%) Strand = Plus / Plus Query: 2023 gagaaggacagagaagaggcaatggatcc 2051 ||||||||||||||||| ||||||||||| Sbjct: 1832 gagaaggacagagaagaagcaatggatcc 1860 Score = 48.1 bits (24), Expect = 0.20 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1131 gaaaatgcggaattggcttgattactaccaaaacaa 1166 |||| ||| |||||||||||||||||| |||||||| Sbjct: 937 gaaattgcagaattggcttgattactatcaaaacaa 972
>gb|AC159536.21| Medicago truncatula chromosome 8 clone mth2-187n4, complete sequence Length = 120612 Score = 65.9 bits (33), Expect = 8e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 1360 tggggtgcagctgtttgtgctcagacacaacaaacaagcaacccaaccctttggctgact 1419 |||||||| || ||||||||||| || |||||||| || || ||||| ||||| ||||| Sbjct: 91994 tggggtgctgcagtttgtgctcaaacccaacaaaccagaaatccaacaatttggttgact 91935 Query: 1420 gaatgggctccagaacctcgtgatgtcta 1448 || ||||||||||| || || |||||||| Sbjct: 91934 gagtgggctccagagccacgggatgtcta 91906 Score = 48.1 bits (24), Expect = 0.20 Identities = 57/68 (83%) Strand = Plus / Minus Query: 994 aacataccaccagaccctgatgaatcagttagcgagcttgtggaacatttcttccttgtc 1053 ||||| |||||||| |||||||||| || | ||||||||||| || ||||| || ||| Sbjct: 93208 aacattccaccagatactgatgaatctgtcggtgagcttgtggagcacttctttctggtc 93149 Query: 1054 aatcatcc 1061 |||||||| Sbjct: 93148 aatcatcc 93141 Score = 44.1 bits (22), Expect = 3.1 Identities = 34/38 (89%) Strand = Plus / Minus Query: 2095 tatttcttgcttggtcttgtgtatgctgcagtgacacc 2132 ||||| ||||| ||||| || ||||||||||||||||| Sbjct: 90818 tattttttgctgggtctagtctatgctgcagtgacacc 90781
>ref|NM_001072036.1| Oryza sativa (japonica cultivar-group) Os10g0579100 (Os10g0579100) mRNA, complete cds Length = 2711 Score = 65.9 bits (33), Expect = 8e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 1870 ataccaaggatcattggtgtagccataccaatgaaggcaacatttttcataacatacgta 1929 |||||||||| |||||| ||||| ||||||||||| || |||||||| || |||||| || Sbjct: 1612 ataccaaggaccattggagtagctataccaatgaaagctacattttttatgacatacata 1671 Query: 1930 atggt 1934 ||||| Sbjct: 1672 atggt 1676
>ref|NM_001061992.1| Oryza sativa (japonica cultivar-group) Os05g0393800 (Os05g0393800) mRNA, complete cds Length = 2703 Score = 65.9 bits (33), Expect = 8e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 2191 cagatcattaatgtctacaatcaacgatacgagagtggtgcgcagttctggcc 2243 ||||||||||||||||||||||| | ||| |||||||| ||||| |||||||| Sbjct: 2116 cagatcattaatgtctacaatcagcaatatgagagtggcgcgcaattctggcc 2168 Score = 61.9 bits (31), Expect = 1e-05 Identities = 85/103 (82%) Strand = Plus / Plus Query: 998 taccaccagaccctgatgaatcagttagcgagcttgtggaacatttcttccttgtcaatc 1057 ||||||| ||||| |||||| ||||||| |||| ||| || || ||||| |||||||| Sbjct: 920 taccacctgacccagatgaaacagttagtgagcatgttgagcacttctttgctgtcaatc 979 Query: 1058 atcctgatcattatctgaaacatcagacagtttacaatgcaaa 1100 ||| |||||||||||| | || ||||| || ||||||||||| Sbjct: 980 atcgtgatcattatctcagtcaccagaccgtatacaatgcaaa 1022 Score = 58.0 bits (29), Expect = 2e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1900 atgaaggcaacatttttcataacatacgtaatggtcgatggttggactggtgt 1952 ||||| |||||||||||||| ||||| |||||||| ||||| ||| ||||||| Sbjct: 1825 atgaaagcaacatttttcatcacatatgtaatggttgatggctgggctggtgt 1877 Score = 52.0 bits (26), Expect = 0.013 Identities = 41/46 (89%) Strand = Plus / Plus Query: 473 tacagcccatcaacgacaggatcttcttcccgaaatggtacctcaa 518 ||||||| |||||||||||| ||| ||| || |||||||||||||| Sbjct: 392 tacagcctatcaacgacagggtctactttcccaaatggtacctcaa 437 Score = 50.1 bits (25), Expect = 0.049 Identities = 73/89 (82%) Strand = Plus / Plus Query: 1357 cggtggggtgcagctgtttgtgctcagacacaacaaacaagcaacccaaccctttggctg 1416 |||||||| || |||||||| ||||| || ||||| || ||||| ||||| | ||||| Sbjct: 1282 cggtggggagctgctgtttgcgctcaaacgcaacagacgagcaatccaacgttgtggctt 1341 Query: 1417 actgaatgggctccagaacctcgtgatgt 1445 || || ||||| ||||||||||| ||||| Sbjct: 1342 accgagtgggccccagaacctcgggatgt 1370
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 65.9 bits (33), Expect = 8e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 1870 ataccaaggatcattggtgtagccataccaatgaaggcaacatttttcataacatacgta 1929 |||||||||| |||||| ||||| ||||||||||| || |||||||| || |||||| || Sbjct: 22569110 ataccaaggaccattggagtagctataccaatgaaagctacattttttatgacatacata 22569051 Query: 1930 atggt 1934 ||||| Sbjct: 22569050 atggt 22569046
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence Length = 139999 Score = 65.9 bits (33), Expect = 8e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 1870 ataccaaggatcattggtgtagccataccaatgaaggcaacatttttcataacatacgta 1929 |||||||||| |||||| ||||| ||||||||||| || |||||||| || |||||| || Sbjct: 23779 ataccaaggaccattggagtagctataccaatgaaagctacattttttatgacatacata 23720 Query: 1930 atggt 1934 ||||| Sbjct: 23719 atggt 23715
>dbj|AK102587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098F01, full insert sequence Length = 2714 Score = 65.9 bits (33), Expect = 8e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 1870 ataccaaggatcattggtgtagccataccaatgaaggcaacatttttcataacatacgta 1929 |||||||||| |||||| ||||| ||||||||||| || |||||||| || |||||| || Sbjct: 1615 ataccaaggaccattggagtagctataccaatgaaagctacattttttatgacatacata 1674 Query: 1930 atggt 1934 ||||| Sbjct: 1675 atggt 1679
>dbj|AK069074.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023005F15, full insert sequence Length = 2704 Score = 65.9 bits (33), Expect = 8e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 2191 cagatcattaatgtctacaatcaacgatacgagagtggtgcgcagttctggcc 2243 ||||||||||||||||||||||| | ||| |||||||| ||||| |||||||| Sbjct: 2117 cagatcattaatgtctacaatcagcaatatgagagtggcgcgcaattctggcc 2169 Score = 61.9 bits (31), Expect = 1e-05 Identities = 85/103 (82%) Strand = Plus / Plus Query: 998 taccaccagaccctgatgaatcagttagcgagcttgtggaacatttcttccttgtcaatc 1057 ||||||| ||||| |||||| ||||||| |||| ||| || || ||||| |||||||| Sbjct: 921 taccacctgacccagatgaaacagttagtgagcatgttgagcacttctttgctgtcaatc 980 Query: 1058 atcctgatcattatctgaaacatcagacagtttacaatgcaaa 1100 ||| |||||||||||| | || ||||| || ||||||||||| Sbjct: 981 atcgtgatcattatctcagtcaccagaccgtatacaatgcaaa 1023 Score = 58.0 bits (29), Expect = 2e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1900 atgaaggcaacatttttcataacatacgtaatggtcgatggttggactggtgt 1952 ||||| |||||||||||||| ||||| |||||||| ||||| ||| ||||||| Sbjct: 1826 atgaaagcaacatttttcatcacatatgtaatggttgatggctgggctggtgt 1878 Score = 52.0 bits (26), Expect = 0.013 Identities = 41/46 (89%) Strand = Plus / Plus Query: 473 tacagcccatcaacgacaggatcttcttcccgaaatggtacctcaa 518 ||||||| |||||||||||| ||| ||| || |||||||||||||| Sbjct: 393 tacagcctatcaacgacagggtctactttcccaaatggtacctcaa 438 Score = 50.1 bits (25), Expect = 0.049 Identities = 73/89 (82%) Strand = Plus / Plus Query: 1357 cggtggggtgcagctgtttgtgctcagacacaacaaacaagcaacccaaccctttggctg 1416 |||||||| || |||||||| ||||| || ||||| || ||||| ||||| | ||||| Sbjct: 1283 cggtggggagctgctgtttgcgctcaaacgcaacagacgagcaatccaacgttgtggctt 1342 Query: 1417 actgaatgggctccagaacctcgtgatgt 1445 || || ||||| ||||||||||| ||||| Sbjct: 1343 accgagtgggccccagaacctcgggatgt 1371
>gb|AC189464.1| Brassica rapa subsp. pekinensis clone KBrB075L03, complete sequence Length = 132081 Score = 63.9 bits (32), Expect = 3e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 2008 ttcttggtcaagacggagaaggacagagaagaggcaatggatcc 2051 |||||||||||||| |||||||||||||| ||||| |||||||| Sbjct: 8259 ttcttggtcaagactgagaaggacagagaggaggcgatggatcc 8216 Score = 58.0 bits (29), Expect = 2e-04 Identities = 59/69 (85%) Strand = Plus / Minus Query: 1092 caatgcaaataagcttgctgacctggttgaaaagaagaagaaaatgcggaattggcttga 1151 ||||||||| ||||| ||||| |||| |||||||||||||| ||| ||| |||||||| Sbjct: 9321 caatgcaaacaagctcgctgatttggtggaaaagaagaagaagctgcagaactggcttga 9262 Query: 1152 ttactacca 1160 ||| ||||| Sbjct: 9261 ttattacca 9253 Score = 58.0 bits (29), Expect = 2e-04 Identities = 62/73 (84%) Strand = Plus / Minus Query: 998 taccaccagaccctgatgaatcagttagcgagcttgtggaacatttcttccttgtcaatc 1057 |||| |||||| | |||||| | ||||| || || ||||| ||||||||||| ||||||| Sbjct: 9494 tacctccagacgcagatgaaactgttagtgaactggtggagcatttcttcctggtcaatc 9435 Query: 1058 atcctgatcatta 1070 | ||||||||||| Sbjct: 9434 accctgatcatta 9422 Score = 52.0 bits (26), Expect = 0.013 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1411 tggctgactgaatgggctccagaacctcgtgatgtcta 1448 ||||| || |||||||||||||| |||||||||||||| Sbjct: 8927 tggctaaccgaatgggctccagagcctcgtgatgtcta 8890
>gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0014C03, complete sequence Length = 143739 Score = 63.9 bits (32), Expect = 3e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 2192 agatcattaatgtctacaatcaacgatacgagagtggtgcgcagttctggcc 2243 |||||||||||||||||||||| | ||| |||||||| ||||| |||||||| Sbjct: 33808 agatcattaatgtctacaatcagcaatatgagagtggcgcgcaattctggcc 33859 Score = 58.0 bits (29), Expect = 2e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1900 atgaaggcaacatttttcataacatacgtaatggtcgatggttggactggtgt 1952 ||||| |||||||||||||| ||||| |||||||| ||||| ||| ||||||| Sbjct: 33375 atgaaagcaacatttttcatcacatatgtaatggttgatggctgggctggtgt 33427 Score = 56.0 bits (28), Expect = 8e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 998 taccaccagaccctgatgaatcagttagcgagcttgtggaacatttcttccttgtcaatc 1057 ||||||| ||||| |||||| ||||||| |||| ||| || || ||||| |||||||| Sbjct: 30881 taccacctgacccagatgaaacagttagtgagcatgttgagcacttctttgctgtcaatc 30940 Query: 1058 atcctgatcattatct 1073 ||| |||||||||||| Sbjct: 30941 atcgtgatcattatct 30956 Score = 52.0 bits (26), Expect = 0.013 Identities = 41/46 (89%) Strand = Plus / Plus Query: 473 tacagcccatcaacgacaggatcttcttcccgaaatggtacctcaa 518 ||||||| |||||||||||| ||| ||| || |||||||||||||| Sbjct: 29278 tacagcctatcaacgacagggtctactttcccaaatggtacctcaa 29323 Score = 50.1 bits (25), Expect = 0.049 Identities = 73/89 (82%) Strand = Plus / Plus Query: 1357 cggtggggtgcagctgtttgtgctcagacacaacaaacaagcaacccaaccctttggctg 1416 |||||||| || |||||||| ||||| || ||||| || ||||| ||||| | ||||| Sbjct: 31759 cggtggggagctgctgtttgcgctcaaacgcaacagacgagcaatccaacgttgtggctt 31818 Query: 1417 actgaatgggctccagaacctcgtgatgt 1445 || || ||||| ||||||||||| ||||| Sbjct: 31819 accgagtgggccccagaacctcgggatgt 31847
>ref|NM_116524.1| Arabidopsis thaliana unknown protein (AT4G02900) mRNA, complete cds Length = 2358 Score = 61.9 bits (31), Expect = 1e-05 Identities = 76/91 (83%) Strand = Plus / Plus Query: 1298 aaaaggtcatgaaggatcccaagtcaattatgccagcagcctttgtttcttttcgttcac 1357 ||||| ||||||| ||||| ||| | || ||||| ||||| |||||||| || | |||| Sbjct: 920 aaaagatcatgaacgatcctaaggctatcatgccggcagcatttgtttccttcagatcac 979 Query: 1358 ggtggggtgcagctgtttgtgctcagacaca 1388 ||||||| |||||||||||||||| ||||| Sbjct: 980 ggtggggaacagctgtttgtgctcaaacaca 1010 Score = 58.0 bits (29), Expect = 2e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1897 ccaatgaaggcaacatttttcataacatacgtaatggtcgatggttggactgg 1949 ||||||||||| ||||||||||| ||||| | ||||||||||||||| |||| Sbjct: 1519 ccaatgaaggccacatttttcatcacatatatcatggtcgatggttgggctgg 1571 Score = 46.1 bits (23), Expect = 0.77 Identities = 59/71 (83%) Strand = Plus / Plus Query: 1003 ccagaccctgatgaatcagttagcgagcttgtggaacatttcttccttgtcaatcatcct 1062 ||||| |||||||||||||| | ||||| ||| || || ||||| ||| |||||||| Sbjct: 622 ccagatcctgatgaatcagtaaacgagcatgttgagcacttcttttgtgtaaatcatcca 681 Query: 1063 gatcattatct 1073 ||||||||||| Sbjct: 682 gatcattatct 692
>gb|AC004044.1| Arabidopsis thaliana BAC T5J8 from chromosome IV, top arm, complete sequence Length = 98527 Score = 61.9 bits (31), Expect = 1e-05 Identities = 76/91 (83%) Strand = Plus / Plus Query: 1298 aaaaggtcatgaaggatcccaagtcaattatgccagcagcctttgtttcttttcgttcac 1357 ||||| ||||||| ||||| ||| | || ||||| ||||| |||||||| || | |||| Sbjct: 82966 aaaagatcatgaacgatcctaaggctatcatgccggcagcatttgtttccttcagatcac 83025 Query: 1358 ggtggggtgcagctgtttgtgctcagacaca 1388 ||||||| |||||||||||||||| ||||| Sbjct: 83026 ggtggggaacagctgtttgtgctcaaacaca 83056 Score = 58.0 bits (29), Expect = 2e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1897 ccaatgaaggcaacatttttcataacatacgtaatggtcgatggttggactgg 1949 ||||||||||| ||||||||||| ||||| | ||||||||||||||| |||| Sbjct: 83736 ccaatgaaggccacatttttcatcacatatatcatggtcgatggttgggctgg 83788 Score = 46.1 bits (23), Expect = 0.77 Identities = 59/71 (83%) Strand = Plus / Plus Query: 1003 ccagaccctgatgaatcagttagcgagcttgtggaacatttcttccttgtcaatcatcct 1062 ||||| |||||||||||||| | ||||| ||| || || ||||| ||| |||||||| Sbjct: 82324 ccagatcctgatgaatcagtaaacgagcatgttgagcacttcttttgtgtaaatcatcca 82383 Query: 1063 gatcattatct 1073 ||||||||||| Sbjct: 82384 gatcattatct 82394
>gb|AF069442.1| Arabidopsis thaliana BAC T4I9, chromosome IV, near 17 cM, complete sequence Length = 98913 Score = 61.9 bits (31), Expect = 1e-05 Identities = 76/91 (83%) Strand = Plus / Minus Query: 1298 aaaaggtcatgaaggatcccaagtcaattatgccagcagcctttgtttcttttcgttcac 1357 ||||| ||||||| ||||| ||| | || ||||| ||||| |||||||| || | |||| Sbjct: 97465 aaaagatcatgaacgatcctaaggctatcatgccggcagcatttgtttccttcagatcac 97406 Query: 1358 ggtggggtgcagctgtttgtgctcagacaca 1388 ||||||| |||||||||||||||| ||||| Sbjct: 97405 ggtggggaacagctgtttgtgctcaaacaca 97375 Score = 58.0 bits (29), Expect = 2e-04 Identities = 47/53 (88%) Strand = Plus / Minus Query: 1897 ccaatgaaggcaacatttttcataacatacgtaatggtcgatggttggactgg 1949 ||||||||||| ||||||||||| ||||| | ||||||||||||||| |||| Sbjct: 96695 ccaatgaaggccacatttttcatcacatatatcatggtcgatggttgggctgg 96643 Score = 46.1 bits (23), Expect = 0.77 Identities = 59/71 (83%) Strand = Plus / Minus Query: 1003 ccagaccctgatgaatcagttagcgagcttgtggaacatttcttccttgtcaatcatcct 1062 ||||| |||||||||||||| | ||||| ||| || || ||||| ||| |||||||| Sbjct: 98107 ccagatcctgatgaatcagtaaacgagcatgttgagcacttcttttgtgtaaatcatcca 98048 Query: 1063 gatcattatct 1073 ||||||||||| Sbjct: 98047 gatcattatct 98037
>emb|AL161495.2|ATCHRIV7 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 7 Length = 199615 Score = 61.9 bits (31), Expect = 1e-05 Identities = 76/91 (83%) Strand = Plus / Plus Query: 1298 aaaaggtcatgaaggatcccaagtcaattatgccagcagcctttgtttcttttcgttcac 1357 ||||| ||||||| ||||| ||| | || ||||| ||||| |||||||| || | |||| Sbjct: 131636 aaaagatcatgaacgatcctaaggctatcatgccggcagcatttgtttccttcagatcac 131695 Query: 1358 ggtggggtgcagctgtttgtgctcagacaca 1388 ||||||| |||||||||||||||| ||||| Sbjct: 131696 ggtggggaacagctgtttgtgctcaaacaca 131726 Score = 58.0 bits (29), Expect = 2e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1897 ccaatgaaggcaacatttttcataacatacgtaatggtcgatggttggactgg 1949 ||||||||||| ||||||||||| ||||| | ||||||||||||||| |||| Sbjct: 132406 ccaatgaaggccacatttttcatcacatatatcatggtcgatggttgggctgg 132458 Score = 46.1 bits (23), Expect = 0.77 Identities = 59/71 (83%) Strand = Plus / Plus Query: 1003 ccagaccctgatgaatcagttagcgagcttgtggaacatttcttccttgtcaatcatcct 1062 ||||| |||||||||||||| | ||||| ||| || || ||||| ||| |||||||| Sbjct: 130994 ccagatcctgatgaatcagtaaacgagcatgttgagcacttcttttgtgtaaatcatcca 131053 Query: 1063 gatcattatct 1073 ||||||||||| Sbjct: 131054 gatcattatct 131064
>dbj|AB019232.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MIL23 Length = 80818 Score = 58.0 bits (29), Expect = 2e-04 Identities = 56/65 (86%) Strand = Plus / Minus Query: 982 gttcttgtacggaacataccaccagaccctgatgaatcagttagcgagcttgtggaacat 1041 ||||||||| ||||||| || ||||| |||||||||||||| || ||||| || || ||| Sbjct: 50893 gttcttgtaaggaacattcctccagatcctgatgaatcagtaagtgagctcgttgagcat 50834 Query: 1042 ttctt 1046 ||||| Sbjct: 50833 ttctt 50829 Score = 50.1 bits (25), Expect = 0.049 Identities = 28/29 (96%) Strand = Plus / Minus Query: 2023 gagaaggacagagaagaggcaatggatcc 2051 ||||||||||||||||| ||||||||||| Sbjct: 49525 gagaaggacagagaagaagcaatggatcc 49497 Score = 48.1 bits (24), Expect = 0.20 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1131 gaaaatgcggaattggcttgattactaccaaaacaa 1166 |||| ||| |||||||||||||||||| |||||||| Sbjct: 50669 gaaattgcagaattggcttgattactatcaaaacaa 50634
>gb|AY372423.1| Medicago truncatula B gene, partial sequence Length = 6574 Score = 56.0 bits (28), Expect = 8e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 1327 atgccagcagcctttgtttcttttcgttcacggtggggtgcagctgtttgtgctcagaca 1386 |||||||||||||||||||| || | || |||||||| || |||||||| || || Sbjct: 885 atgccagcagcctttgtttccttcaaaactcgttggggtgctgcagtttgtgcacaaact 944 Query: 1387 caacaaacaagcaacccaaccctttggctgactgaatgggctccagaacctcgtga 1442 |||||||| || || ||||| | ||| ||||||||||||||||||| || ||||| Sbjct: 945 caacaaactagaaatccaacaatatggttgactgaatgggctccagagccccgtga 1000 Score = 50.1 bits (25), Expect = 0.049 Identities = 46/53 (86%) Strand = Plus / Plus Query: 2080 cctcgaatacagctatatttcttgcttggtcttgtgtatgctgcagtgacacc 2132 |||| |||||| || |||||||||||||| ||||||||| ||| ||| ||||| Sbjct: 2456 cctcaaatacaactttatttcttgcttggccttgtgtattctgtagtcacacc 2508 Score = 48.1 bits (24), Expect = 0.20 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1897 ccaatgaaggcaacatttttcataacatacgtaatggtcgatgg 1940 |||||||| ||||| || |||||||||||| ||||||| ||||| Sbjct: 2273 ccaatgaaagcaactttcttcataacatacataatggttgatgg 2316
>emb|CR936945.2| Medicago truncatula chromosome 5 clone mte1-67e6, COMPLETE SEQUENCE Length = 127675 Score = 56.0 bits (28), Expect = 8e-04 Identities = 94/116 (81%) Strand = Plus / Minus Query: 1327 atgccagcagcctttgtttcttttcgttcacggtggggtgcagctgtttgtgctcagaca 1386 |||||||||||||||||||| || | || |||||||| || |||||||| || || Sbjct: 42357 atgccagcagcctttgtttccttcaaaactcgttggggtgctgcagtttgtgcacaaact 42298 Query: 1387 caacaaacaagcaacccaaccctttggctgactgaatgggctccagaacctcgtga 1442 |||||||| || || ||||| | ||| ||||||||||||||||||| || ||||| Sbjct: 42297 caacaaactagaaatccaacaatatggttgactgaatgggctccagagccccgtga 42242 Score = 50.1 bits (25), Expect = 0.049 Identities = 46/53 (86%) Strand = Plus / Minus Query: 2080 cctcgaatacagctatatttcttgcttggtcttgtgtatgctgcagtgacacc 2132 |||| |||||| || |||||||||||||| ||||||||| ||| ||| ||||| Sbjct: 40786 cctcaaatacaactttatttcttgcttggccttgtgtattctgtagtcacacc 40734 Score = 48.1 bits (24), Expect = 0.20 Identities = 39/44 (88%) Strand = Plus / Minus Query: 1897 ccaatgaaggcaacatttttcataacatacgtaatggtcgatgg 1940 |||||||| ||||| || |||||||||||| ||||||| ||||| Sbjct: 40969 ccaatgaaagcaactttcttcataacatacataatggttgatgg 40926 Score = 48.1 bits (24), Expect = 0.20 Identities = 54/64 (84%) Strand = Plus / Minus Query: 1010 ctgatgaatcagttagcgagcttgtggaacatttcttccttgtcaatcatcctgatcatt 1069 ||||||||||||| || || || || ||||||||||| | ||||| ||||||||||| | Sbjct: 43687 ctgatgaatcagtcagtgaactagttgaacatttctttttggtcaaccatcctgatcaat 43628 Query: 1070 atct 1073 |||| Sbjct: 43627 atct 43624
>gb|AY105729.1| Zea mays PCO132095 mRNA sequence Length = 759 Score = 56.0 bits (28), Expect = 8e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 2256 acgcataatcgtagcctcgattgcatcgcagctgcttctccttgggctactgagcacaaa 2315 |||||||||| ||| | ||||| ||| |||||||||||||||||| |||| |||||||| Sbjct: 25 acgcataatcacagcgttgattgtatcacagctgcttctccttgggttacttagcacaaa 84
>gb|AC129162.5| Rattus norvegicus 9 BAC CH230-108L13 (Children's Hospital Oakland Research Institute) complete sequence Length = 245677 Score = 54.0 bits (27), Expect = 0.003 Identities = 27/27 (100%) Strand = Plus / Minus Query: 128 aaggaaggaaggaaggagttggagagg 154 ||||||||||||||||||||||||||| Sbjct: 218985 aaggaaggaaggaaggagttggagagg 218959
>ref|NM_178965.1| Arabidopsis thaliana unknown protein (AT4G04340) mRNA, complete cds Length = 2790 Score = 52.0 bits (26), Expect = 0.013 Identities = 83/102 (81%) Strand = Plus / Plus Query: 964 cgaccggatcagttcactgttcttgtacggaacataccaccagaccctgatgaatcagtt 1023 ||||| || ||||||||||||||||| |||| |||| || ||||| || ||| | || Sbjct: 843 cgacctgaccagttcactgttcttgttaggaatgtacctccggacccagacgaaactgtg 902 Query: 1024 agcgagcttgtggaacatttcttccttgtcaatcatcctgat 1065 || ||||||||||| ||||| ||||| || ||||| |||||| Sbjct: 903 agtgagcttgtggagcattttttcctagttaatcaccctgat 944
>ref|NM_116672.2| Arabidopsis thaliana unknown protein (AT4G04340) mRNA, complete cds Length = 2788 Score = 52.0 bits (26), Expect = 0.013 Identities = 83/102 (81%) Strand = Plus / Plus Query: 964 cgaccggatcagttcactgttcttgtacggaacataccaccagaccctgatgaatcagtt 1023 ||||| || ||||||||||||||||| |||| |||| || ||||| || ||| | || Sbjct: 841 cgacctgaccagttcactgttcttgttaggaatgtacctccggacccagacgaaactgtg 900 Query: 1024 agcgagcttgtggaacatttcttccttgtcaatcatcctgat 1065 || ||||||||||| ||||| ||||| || ||||| |||||| Sbjct: 901 agtgagcttgtggagcattttttcctagttaatcaccctgat 942
>ref|NM_178966.1| Arabidopsis thaliana unknown protein (AT4G04340) mRNA, complete cds Length = 3086 Score = 52.0 bits (26), Expect = 0.013 Identities = 83/102 (81%) Strand = Plus / Plus Query: 964 cgaccggatcagttcactgttcttgtacggaacataccaccagaccctgatgaatcagtt 1023 ||||| || ||||||||||||||||| |||| |||| || ||||| || ||| | || Sbjct: 1139 cgacctgaccagttcactgttcttgttaggaatgtacctccggacccagacgaaactgtg 1198 Query: 1024 agcgagcttgtggaacatttcttccttgtcaatcatcctgat 1065 || ||||||||||| ||||| ||||| || ||||| |||||| Sbjct: 1199 agtgagcttgtggagcattttttcctagttaatcaccctgat 1240
>gb|AY056305.1| Arabidopsis thaliana unknown protein (At4g04340) mRNA, complete cds Length = 2721 Score = 52.0 bits (26), Expect = 0.013 Identities = 83/102 (81%) Strand = Plus / Plus Query: 964 cgaccggatcagttcactgttcttgtacggaacataccaccagaccctgatgaatcagtt 1023 ||||| || ||||||||||||||||| |||| |||| || ||||| || ||| | || Sbjct: 822 cgacctgaccagttcactgttcttgttaggaatgtacctccggacccagacgaaactgtg 881 Query: 1024 agcgagcttgtggaacatttcttccttgtcaatcatcctgat 1065 || ||||||||||| ||||| ||||| || ||||| |||||| Sbjct: 882 agtgagcttgtggagcattttttcctagttaatcaccctgat 923
>gb|AY093209.1| Arabidopsis thaliana unknown protein (At4g04340) mRNA, complete cds Length = 2735 Score = 52.0 bits (26), Expect = 0.013 Identities = 83/102 (81%) Strand = Plus / Plus Query: 964 cgaccggatcagttcactgttcttgtacggaacataccaccagaccctgatgaatcagtt 1023 ||||| || ||||||||||||||||| |||| |||| || ||||| || ||| | || Sbjct: 841 cgacctgaccagttcactgttcttgttaggaatgtacctccggacccagacgaaactgtg 900 Query: 1024 agcgagcttgtggaacatttcttccttgtcaatcatcctgat 1065 || ||||||||||| ||||| ||||| || ||||| |||||| Sbjct: 901 agtgagcttgtggagcattttttcctagttaatcaccctgat 942
>emb|CT030732.13| Mouse DNA sequence from clone RP23-27D5 on chromosome 17, complete sequence Length = 220163 Score = 50.1 bits (25), Expect = 0.049 Identities = 25/25 (100%) Strand = Plus / Plus Query: 128 aaggaaggaaggaaggagttggaga 152 ||||||||||||||||||||||||| Sbjct: 206834 aaggaaggaaggaaggagttggaga 206858
>gb|AF110520.1|MMHC425O18 Mus musculus major histocompatibility complex region NG27, NG28, RPS28, NADH oxidoreductase, NG29, KIFC1, Fas-binding protein, BING1, tapasin, RalGDS-like, KE2, BING4, beta 1,3-galactosyl transferase, and RPS18 genes, complete cds; Sacm21 gene, partial cds; and unknown gene Length = 213245 Score = 50.1 bits (25), Expect = 0.049 Identities = 25/25 (100%) Strand = Plus / Plus Query: 128 aaggaaggaaggaaggagttggaga 152 ||||||||||||||||||||||||| Sbjct: 144267 aaggaaggaaggaaggagttggaga 144291
>gb|AC108401.19| Mus musculus chromosome 12, clone RP24-98A23, complete sequence Length = 213381 Score = 50.1 bits (25), Expect = 0.049 Identities = 31/33 (93%) Strand = Plus / Minus Query: 128 aaggaaggaaggaaggagttggagaggggaggg 160 |||||||||||||||||| ||||| |||||||| Sbjct: 121517 aaggaaggaaggaaggagatggaggggggaggg 121485
>ref|NM_059155.4| Caenorhabditis elegans human CLN (neuronal ceroid lipofuscinosis) related family member (cln-3.2) (cln-3.2) mRNA, complete cds Length = 1391 Score = 48.1 bits (24), Expect = 0.20 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1511 ccttcttcttcctcaacttcttct 1534 |||||||||||||||||||||||| Sbjct: 731 ccttcttcttcctcaacttcttct 708
>dbj|AK229383.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-62-O08 Length = 2669 Score = 48.1 bits (24), Expect = 0.20 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2179 gtctaccgccatcagatcattaatgtctacaatcaacgatacgagagt 2226 ||||| ||||||||||| || ||||| ||||| |||| |||||||||| Sbjct: 1834 gtctatcgccatcagataatcaatgtttacaaccaacaatacgagagt 1881
>gb|AC185106.8| Canis Familiaris chromosome 7, clone XX-39N16, complete sequence Length = 214731 Score = 48.1 bits (24), Expect = 0.20 Identities = 30/32 (93%) Strand = Plus / Plus Query: 128 aaggaaggaaggaaggagttggagaggggagg 159 ||||||||||||||||||| || ||||||||| Sbjct: 23012 aaggaaggaaggaaggagtaggggaggggagg 23043
>ref|NM_102943.3| Arabidopsis thaliana unknown protein (AT1G32090) mRNA, complete cds Length = 2532 Score = 48.1 bits (24), Expect = 0.20 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2179 gtctaccgccatcagatcattaatgtctacaatcaacgatacgagagt 2226 ||||| ||||||||||| || ||||| ||||| |||| |||||||||| Sbjct: 1845 gtctatcgccatcagataatcaatgtttacaaccaacaatacgagagt 1892
>gb|AY372422.1| Medicago truncatula B gene, partial sequence Length = 941 Score = 48.1 bits (24), Expect = 0.20 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1010 ctgatgaatcagttagcgagcttgtggaacatttcttccttgtcaatcatcctgatcatt 1069 ||||||||||||| || || || || ||||||||||| | ||||| ||||||||||| | Sbjct: 666 ctgatgaatcagtcagtgaactagttgaacatttctttttggtcaaccatcctgatcaat 725 Query: 1070 atct 1073 |||| Sbjct: 726 atct 729
>gb|U80439.1| Caenorhabditis elegans cosmid C01G8, complete sequence Length = 38487 Score = 48.1 bits (24), Expect = 0.20 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1511 ccttcttcttcctcaacttcttct 1534 |||||||||||||||||||||||| Sbjct: 4770 ccttcttcttcctcaacttcttct 4793
>gb|AC158355.2| Mus musculus BAC clone RP24-374N16 from chromosome 9, complete sequence Length = 172612 Score = 48.1 bits (24), Expect = 0.20 Identities = 24/24 (100%) Strand = Plus / Plus Query: 137 aggaaggagttggagaggggaggg 160 |||||||||||||||||||||||| Sbjct: 123695 aggaaggagttggagaggggaggg 123718
>emb|AJ571686.1|PDA571686 Phoenix dactylifera microsatellite DNA, clone CIR085 Length = 375 Score = 48.1 bits (24), Expect = 0.20 Identities = 24/24 (100%) Strand = Plus / Minus Query: 53 tctcttcttcctccctttcccttt 76 |||||||||||||||||||||||| Sbjct: 98 tctcttcttcctccctttcccttt 75
>gb|AF326786.1| Caenorhabditis elegans CLN-3.2 (cln-3.2) mRNA, complete cds Length = 1419 Score = 48.1 bits (24), Expect = 0.20 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1511 ccttcttcttcctcaacttcttct 1534 |||||||||||||||||||||||| Sbjct: 754 ccttcttcttcctcaacttcttct 731
>emb|BX816846.1|CNS0AE0S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH71ZA08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2533 Score = 48.1 bits (24), Expect = 0.20 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2179 gtctaccgccatcagatcattaatgtctacaatcaacgatacgagagt 2226 ||||| ||||||||||| || ||||| ||||| |||| |||||||||| Sbjct: 1846 gtctatcgccatcagataatcaatgtttacaaccaacaatacgagagt 1893
>ref|NM_104912.1| Arabidopsis thaliana unknown protein (AT1G62320) mRNA, complete cds Length = 2310 Score = 46.1 bits (23), Expect = 0.77 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1126 aagaagaaaatgcggaattggcttgattactacca 1160 ||||||||||||| ||||||| | ||||||||||| Sbjct: 751 aagaagaaaatgcagaattggttagattactacca 785
>ref|NM_117632.3| Arabidopsis thaliana unknown protein (AT4G15430) mRNA, complete cds Length = 2573 Score = 46.1 bits (23), Expect = 0.77 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1360 tggggtgcagctgtttgtgctcagacacaacaaacaagcaacccaac 1406 ||||| ||||| ||||||||||| || ||||| ||||| |||||||| Sbjct: 1125 tggggagcagcggtttgtgctcaaactcaacagacaagaaacccaac 1171 Score = 44.1 bits (22), Expect = 3.1 Identities = 64/78 (82%) Strand = Plus / Plus Query: 1515 cttcttcctcaacttcttctatgtcattccaatagcattcgtacagactcttgcaaatct 1574 ||||||||||| |||||||| | || ||||||||||| |||||| | || || || | Sbjct: 1280 cttcttcctcaccttcttcttcatgataccaatagcatttgtacagtcactcgccaacat 1339 Query: 1575 tgaaggcatagagaaggc 1592 ||||||||||||||||| Sbjct: 1340 cgaaggcatagagaaggc 1357
>gb|AC107700.12| Mus musculus chromosome 3, clone RP23-288N9, complete sequence Length = 194390 Score = 46.1 bits (23), Expect = 0.77 Identities = 23/23 (100%) Strand = Plus / Plus Query: 53 tctcttcttcctccctttccctt 75 ||||||||||||||||||||||| Sbjct: 83162 tctcttcttcctccctttccctt 83184
>gb|AF254983.3| Homo sapiens chromosome 21 clone RP11-589M2 map p11-q21.1, complete sequence Length = 190711 Score = 46.1 bits (23), Expect = 0.77 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1512 cttcttcttcctcaacttcttct 1534 ||||||||||||||||||||||| Sbjct: 167783 cttcttcttcctcaacttcttct 167805
>gb|AC119395.2| Mus musculus chromosome 8 clone MGS1-178N23 map A3, complete sequence Length = 92300 Score = 46.1 bits (23), Expect = 0.77 Identities = 23/23 (100%) Strand = Plus / Plus Query: 123 agcacaaggaaggaaggaaggag 145 ||||||||||||||||||||||| Sbjct: 14197 agcacaaggaaggaaggaaggag 14219
>gb|AY064008.1| Arabidopsis thaliana unknown protein (At4g15430) mRNA, complete cds Length = 2600 Score = 46.1 bits (23), Expect = 0.77 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1360 tggggtgcagctgtttgtgctcagacacaacaaacaagcaacccaac 1406 ||||| ||||| ||||||||||| || ||||| ||||| |||||||| Sbjct: 1140 tggggagcagcggtttgtgctcaaactcaacagacaagaaacccaac 1186 Score = 44.1 bits (22), Expect = 3.1 Identities = 64/78 (82%) Strand = Plus / Plus Query: 1515 cttcttcctcaacttcttctatgtcattccaatagcattcgtacagactcttgcaaatct 1574 ||||||||||| |||||||| | || ||||||||||| |||||| | || || || | Sbjct: 1295 cttcttcctcaccttcttcttcatgataccaatagcatttgtacagtcactcgccaacat 1354 Query: 1575 tgaaggcatagagaaggc 1592 ||||||||||||||||| Sbjct: 1355 cgaaggcatagagaaggc 1372
>gb|AC145163.5| Mus musculus BAC clone RP24-238C5 from chromosome 12, complete sequence Length = 194429 Score = 46.1 bits (23), Expect = 0.77 Identities = 26/27 (96%) Strand = Plus / Minus Query: 214 aggaagcaagcaatcaagcaagcaggg 240 ||||||||||||| ||||||||||||| Sbjct: 153992 aggaagcaagcaagcaagcaagcaggg 153966
>emb|AL163201.2|HS21C001 Homo sapiens chromosome 21 segment HS21C001 Length = 281116 Score = 46.1 bits (23), Expect = 0.77 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1512 cttcttcttcctcaacttcttct 1534 ||||||||||||||||||||||| Sbjct: 215919 cttcttcttcctcaacttcttct 215941
>gb|AC093911.2| Homo sapiens BAC clone RP11-765B12 from 2, complete sequence Length = 186199 Score = 46.1 bits (23), Expect = 0.77 Identities = 23/23 (100%) Strand = Plus / Minus Query: 128 aaggaaggaaggaaggagttgga 150 ||||||||||||||||||||||| Sbjct: 5910 aaggaaggaaggaaggagttgga 5888
>gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complete sequence Length = 209156 Score = 46.1 bits (23), Expect = 0.77 Identities = 29/31 (93%) Strand = Plus / Minus Query: 128 aaggaaggaaggaaggagttggagaggggag 158 |||||||||||||||||| ||||||| |||| Sbjct: 32403 aaggaaggaaggaaggagatggagagaggag 32373
>gb|AC003113.2|AC003113 Genomic sequence for Arabidopsis thaliana BAC F24O1 from chromosome I, complete sequence Length = 86372 Score = 46.1 bits (23), Expect = 0.77 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1126 aagaagaaaatgcggaattggcttgattactacca 1160 ||||||||||||| ||||||| | ||||||||||| Sbjct: 10138 aagaagaaaatgcagaattggttagattactacca 10104
>dbj|AP003900.1| Homo sapiens genomic DNA, chromosome 21q, clone:CMP21-T171+S39, complete sequences Length = 85444 Score = 46.1 bits (23), Expect = 0.77 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1512 cttcttcttcctcaacttcttct 1534 ||||||||||||||||||||||| Sbjct: 20232 cttcttcttcctcaacttcttct 20254
>emb|Z97338.2|ATFCA3 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 3 Length = 200252 Score = 46.1 bits (23), Expect = 0.77 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1360 tggggtgcagctgtttgtgctcagacacaacaaacaagcaacccaac 1406 ||||| ||||| ||||||||||| || ||||| ||||| |||||||| Sbjct: 194368 tggggagcagcggtttgtgctcaaactcaacagacaagaaacccaac 194414 Score = 44.1 bits (22), Expect = 3.1 Identities = 64/78 (82%) Strand = Plus / Plus Query: 1515 cttcttcctcaacttcttctatgtcattccaatagcattcgtacagactcttgcaaatct 1574 ||||||||||| |||||||| | || ||||||||||| |||||| | || || || | Sbjct: 194523 cttcttcctcaccttcttcttcatgataccaatagcatttgtacagtcactcgccaacat 194582 Query: 1575 tgaaggcatagagaaggc 1592 ||||||||||||||||| Sbjct: 194583 cgaaggcatagagaaggc 194600
>emb|AL161541.2|ATCHRIV41 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 41 Length = 197419 Score = 46.1 bits (23), Expect = 0.77 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1360 tggggtgcagctgtttgtgctcagacacaacaaacaagcaacccaac 1406 ||||| ||||| ||||||||||| || ||||| ||||| |||||||| Sbjct: 147845 tggggagcagcggtttgtgctcaaactcaacagacaagaaacccaac 147891 Score = 44.1 bits (22), Expect = 3.1 Identities = 64/78 (82%) Strand = Plus / Plus Query: 1515 cttcttcctcaacttcttctatgtcattccaatagcattcgtacagactcttgcaaatct 1574 ||||||||||| |||||||| | || ||||||||||| |||||| | || || || | Sbjct: 148000 cttcttcctcaccttcttcttcatgataccaatagcatttgtacagtcactcgccaacat 148059 Query: 1575 tgaaggcatagagaaggc 1592 ||||||||||||||||| Sbjct: 148060 cgaaggcatagagaaggc 148077
>emb|AL078472.3| Homo sapiens chromosome 21 BAC B11L7C8, complete sequence Length = 75657 Score = 46.1 bits (23), Expect = 0.77 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1512 cttcttcttcctcaacttcttct 1534 ||||||||||||||||||||||| Sbjct: 37963 cttcttcttcctcaacttcttct 37985
>gb|DQ485452.1| Homo sapiens protein kinase D1 (PRKD1) gene, complete cds Length = 355200 Score = 44.1 bits (22), Expect = 3.1 Identities = 31/33 (93%), Gaps = 2/33 (6%) Strand = Plus / Minus Query: 128 aaggaaggaaggaaggagttggagaggggaggg 160 |||||||||||||||||| ||||||||||||| Sbjct: 166289 aaggaaggaaggaaggag--ggagaggggaggg 166259
>ref|XM_631700.1| Dictyostelium discoideum AX4 myb domain-containing protein (DDB_0220513) mRNA, complete cds Length = 4863 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1513 ttcttcttcctcaacttcttctatgtcatt 1542 ||||||||||||||||||||| || ||||| Sbjct: 4434 ttcttcttcctcaacttcttccatttcatt 4405
>gb|AC167973.4| Mus musculus BAC clone RP23-453B4 from chromosome 9, complete sequence Length = 182190 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 128 aaggaaggaaggaaggagttggagag 153 |||||||||||||||||| ||||||| Sbjct: 3669 aaggaaggaaggaaggagctggagag 3694
>gb|AC163339.5| Mus musculus BAC clone RP24-447O5 from chromosome 14, complete sequence Length = 180291 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1270 ataggaaaggaagaagttgaag 1291 |||||||||||||||||||||| Sbjct: 8786 ataggaaaggaagaagttgaag 8807
>gb|AF259074.1| Mus musculus T-cell receptor alpha locus BAC clone MBAC519 from 14D1-D2, complete sequence Length = 72831 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1270 ataggaaaggaagaagttgaag 1291 |||||||||||||||||||||| Sbjct: 10833 ataggaaaggaagaagttgaag 10812
>gb|AC102614.11| Mus musculus chromosome 8, clone RP23-421L10, complete sequence Length = 197194 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1517 tcttcctcaacttcttctatgt 1538 |||||||||||||||||||||| Sbjct: 86748 tcttcctcaacttcttctatgt 86727
>gb|AC146189.3| Pan troglodytes BAC clone CH251-490L21 from Y, complete sequence Length = 180597 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1116 ggttgaaaagaagaagaaaatg 1137 |||||||||||||||||||||| Sbjct: 17445 ggttgaaaagaagaagaaaatg 17466
>gb|AC132122.2| Mus musculus chromosome 7 clone RP24-78F23, complete sequence Length = 203549 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 agcacaaggaaggaaggaagga 144 |||||||||||||||||||||| Sbjct: 136546 agcacaaggaaggaaggaagga 136525
>gb|AC146174.2| Pan troglodytes BAC clone CH251-549F12 from Y, complete sequence Length = 191823 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1116 ggttgaaaagaagaagaaaatg 1137 |||||||||||||||||||||| Sbjct: 154707 ggttgaaaagaagaagaaaatg 154728
>gb|AC117581.8| Mus musculus chromosome 3, clone RP23-105M18, complete sequence Length = 215747 Score = 44.1 bits (22), Expect = 3.1 Identities = 31/34 (91%) Strand = Plus / Minus Query: 128 aaggaaggaaggaaggagttggagaggggagggc 161 ||||||||||||||||| |||||||||||||| Sbjct: 29914 aaggaaggaaggaaggatgaggagaggggagggc 29881
>gb|AC119848.8| Mus musculus chromosome 7, clone RP23-73B20, complete sequence Length = 239297 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 214 aggaagcaagcaatcaagcaagcagg 239 ||||||||||||| |||||||||||| Sbjct: 118572 aggaagcaagcaagcaagcaagcagg 118547
>ref|XM_381562.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01386.1) partial mRNA Length = 1857 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1512 cttcttcttcctcaacttcttc 1533 |||||||||||||||||||||| Sbjct: 1774 cttcttcttcctcaacttcttc 1753
>emb|AL391277.16| Human DNA sequence from clone RP11-357C3 on chromosome X, complete sequence Length = 194456 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1942 tggactggtgtagctcttgaaatactgaga 1971 |||||||| ||||||| ||||||||||||| Sbjct: 40419 tggactggagtagctcatgaaatactgaga 40448
>emb|AL390234.13| Human DNA sequence from clone RP5-1032G3 on chromosome 1p31.3-32.3 Contains part of a novel gene (FLJ10986), complete sequence Length = 126470 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 214 aggaagcaagcaatcaagcaagcagg 239 ||||||||||||| |||||||||||| Sbjct: 106677 aggaagcaagcaagcaagcaagcagg 106702
>emb|AL360018.13| Human DNA sequence from clone RP11-386L12 on chromosome 9, complete sequence Length = 20922 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1033 gtggaacatttcttccttgtca 1054 |||||||||||||||||||||| Sbjct: 12839 gtggaacatttcttccttgtca 12860
>gb|AE008683.1|AE008683 Mus musculus T-cell receptor alpha/delta locus section 1 of 4 of the complete region Length = 404892 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1270 ataggaaaggaagaagttgaag 1291 |||||||||||||||||||||| Sbjct: 175514 ataggaaaggaagaagttgaag 175493
>emb|AL645739.9| Mouse DNA sequence from clone RP23-213I10 on chromosome 11 Contains the Trpv3 gene for transient receptor potential cation channel subfamily V member 3, the Aspa gene for aspartoacylase (aminoacylase) 2, a novel gene, the genes for olfactory receptor MOR135-11, 12, 13, 2, 1, three olfactory receptor MOR135 pseudogenes and a CpG island, complete sequence Length = 208137 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1731 gatatcacagtcatcactagag 1752 |||||||||||||||||||||| Sbjct: 38059 gatatcacagtcatcactagag 38080
>gb|AF352841.1|AF352841 Takifugu rubripes ATP7b gene, complete sequence Length = 12000 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1201 actggctttcttggatgttttggttc 1226 ||||||||||||||||||||| |||| Sbjct: 6151 actggctttcttggatgtttttgttc 6176
>gb|AC132343.3| Mus musculus BAC clone RP24-175J11 from chromosome unknown, complete sequence Length = 166197 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 agcacaaggaaggaaggaagga 144 |||||||||||||||||||||| Sbjct: 142824 agcacaaggaaggaaggaagga 142803
>gb|AC104407.3| Homo sapiens BAC clone RP11-92A5 from 4, complete sequence Length = 102822 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 128 aaggaaggaaggaaggagttggagagggga 157 ||||||||||||||| ||| |||||||||| Sbjct: 65023 aaggaaggaaggaagaagtgggagagggga 64994
>gb|AC126599.10| Mus musculus chromosome 3, clone RP24-487F9, complete sequence Length = 186281 Score = 44.1 bits (22), Expect = 3.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 128 aaggaaggaaggaaggagttggagaggggagggc 161 ||||||||||||||||| |||||||||||||| Sbjct: 59911 aaggaaggaaggaaggatgaggagaggggagggc 59944
>dbj|BS000614.1| Pan troglodytes chromosome Y clone:PTBY-009K01, complete sequences Length = 63466 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1116 ggttgaaaagaagaagaaaatg 1137 |||||||||||||||||||||| Sbjct: 264 ggttgaaaagaagaagaaaatg 243
>dbj|BS000556.1| Pan troglodytes chromosome Y clone:PTB-461C11, complete sequences Length = 148964 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1116 ggttgaaaagaagaagaaaatg 1137 |||||||||||||||||||||| Sbjct: 94900 ggttgaaaagaagaagaaaatg 94879
>emb|BX119996.7| Mouse DNA sequence from clone RP23-352G15 on chromosome X, complete sequence Length = 191635 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 agcacaaggaaggaaggaagga 144 |||||||||||||||||||||| Sbjct: 151226 agcacaaggaaggaaggaagga 151247
>dbj|AP004488.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT02F05, TM0020, complete sequence Length = 80920 Score = 44.1 bits (22), Expect = 3.1 Identities = 61/74 (82%) Strand = Plus / Plus Query: 2092 ctatatttcttgcttggtcttgtgtatgctgcagtgacaccgctcttgctaccttttata 2151 ||||||||| | ||||| |||||||||||| ||||| ||| || | || ||||| ||| Sbjct: 33862 ctatatttccttcttggaattgtgtatgctgtggtgactccgatccttctgcctttcata 33921 Query: 2152 ctggtgttctttgc 2165 ||||| |||||||| Sbjct: 33922 ctggtcttctttgc 33935
>emb|AL663026.13| Mouse DNA sequence from clone RP23-224M19 on chromosome X, complete sequence Length = 237481 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 217 aagcaagcaatcaagcaagcag 238 |||||||||||||||||||||| Sbjct: 72462 aagcaagcaatcaagcaagcag 72483
>gb|AC004827.1|AC004827 Homo sapiens PAC clone RP1-44L15 from Xq23, complete sequence Length = 129690 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 128 aaggaaggaaggaaggagttgg 149 |||||||||||||||||||||| Sbjct: 110912 aaggaaggaaggaaggagttgg 110891
>dbj|AP001458.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-831H9, complete sequence Length = 177433 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 214 aggaagcaagcaatcaagcaagcagg 239 ||||||||||||| |||||||||||| Sbjct: 45908 aggaagcaagcaaacaagcaagcagg 45933
>emb|AL356756.4|CNS05TDG Human chromosome 14 DNA sequence BAC C-2503I6 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 191965 Score = 44.1 bits (22), Expect = 3.1 Identities = 31/33 (93%), Gaps = 2/33 (6%) Strand = Plus / Minus Query: 128 aaggaaggaaggaaggagttggagaggggaggg 160 |||||||||||||||||| ||||||||||||| Sbjct: 53492 aaggaaggaaggaaggag--ggagaggggaggg 53462
>gb|AF070718.1|AF070718 Homo sapiens BAC clone 529F11 from 8q21, complete sequence Length = 166832 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 128 aaggaaggaaggaaggagttgg 149 |||||||||||||||||||||| Sbjct: 105590 aaggaaggaaggaaggagttgg 105569
>emb|CR376852.17| Zebrafish DNA sequence from clone CH211-181B18 in linkage group 21, complete sequence Length = 157717 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 208 caatccaggaagcaagcaatcaagcaagca 237 ||||| || ||||||||||||||||||||| Sbjct: 105951 caatcaagcaagcaagcaatcaagcaagca 105922
>gb|AC173346.1| Mus musculus BAC clone RP23-42N8 from chromosome 9, complete sequence Length = 219266 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 128 aaggaaggaaggaaggagttggagag 153 |||||||||||||||||| ||||||| Sbjct: 173391 aaggaaggaaggaaggagctggagag 173416
>emb|AL445884.4|CNS07EER Human chromosome 14 DNA sequence BAC R-419C10 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 146828 Score = 44.1 bits (22), Expect = 3.1 Identities = 31/33 (93%), Gaps = 2/33 (6%) Strand = Plus / Minus Query: 128 aaggaaggaaggaaggagttggagaggggaggg 160 |||||||||||||||||| ||||||||||||| Sbjct: 100813 aaggaaggaaggaaggag--ggagaggggaggg 100783
>gb|AC161459.5| Mus musculus BAC clone RP23-117I19 from chromosome 14, complete sequence Length = 212988 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1270 ataggaaaggaagaagttgaag 1291 |||||||||||||||||||||| Sbjct: 108804 ataggaaaggaagaagttgaag 108825
>gb|L01791.1|RABMUSGLY Oryctolagus cuniculus glycogenin mRNA, complete cds Length = 1730 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 aagcaagcaatcaagcaagcagggga 242 |||||||||| ||||||||||||||| Sbjct: 1502 aagcaagcaagcaagcaagcagggga 1477 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 565,505,767 Number of extensions: 33397637 Number of successful extensions: 792130 Number of sequences better than 10.0: 128 Number of HSP's gapped: 792076 Number of HSP's successfully gapped: 324 Length of query: 3143 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 3120 Effective length of database: 18,503,978,556 Effective search space: 57732413094720 Effective search space used: 57732413094720 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
