ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf64f04 |
|---|---|
| Clone Library Name | barley_pub |
>Q9SC19:UPTG1_SOLTU Alpha-1,4-glucan-protein synthase [UDP-forming] 1 - Solanum tuberosum| (Potato) Length = 365 Score = 670 bits (1729), Expect = 0.0 Identities = 315/364 (86%), Positives = 334/364 (91%) Frame = +2 Query: 68 APSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKVIKVPEGFDYELYN 247 A +TPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDP+K+IKVPEGFDYELYN Sbjct: 2 AAATPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIIKVPEGFDYELYN 61 Query: 248 RNDVNRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHI 427 RND+NRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHI Sbjct: 62 RNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHI 121 Query: 428 KNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQLVK 607 KNLL PSTP FFNTLYDPYR+GADFVRGYPFS+REGAPTAVSHGLWLNIPDYDAPTQLVK Sbjct: 122 KNLLCPSTPHFFNTLYDPYRDGADFVRGYPFSMREGAPTAVSHGLWLNIPDYDAPTQLVK 181 Query: 608 PLERNNRYVDAVLTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGW 787 P ERN RYVDAV+TIPKGTLFPMCGMNLAFDR+LIGPAMYFGLMGDGQPIGRYDDMWAGW Sbjct: 182 PHERNTRYVDAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGW 241 Query: 788 CTKVITDHLSLGIKTGLPYIWHSKASNPFVNLKKEYNGIFWQEELIPFFQSVTLSKEATT 967 CTKVI DHL LGIKTGLPYIWHSKASNPFVNLKKEYNGIFWQEE+IPFFQ+ TL KE TT Sbjct: 242 CTKVICDHLGLGIKTGLPYIWHSKASNPFVNLKKEYNGIFWQEEIIPFFQAATLPKECTT 301 Query: 968 VQKCYLELAKQVKAKLGKVDGYFNKLADAMVTWIEAWDELNPPKGAITTTNSPAVKSK*E 1147 VQ+CYLEL+KQVK KL +D YF KL +AMVTWIEAWDELN + SP V+ + + Sbjct: 302 VQQCYLELSKQVKKKLSSIDPYFTKLGEAMVTWIEAWDELNLLGTTWLSCLSPMVQQRLK 361 Query: 1148 AVAY 1159 + Y Sbjct: 362 SRCY 365
>P80607:UPTG_MAIZE Alpha-1,4-glucan-protein synthase [UDP-forming] - Zea mays (Maize)| Length = 364 Score = 667 bits (1721), Expect = 0.0 Identities = 311/344 (90%), Positives = 325/344 (94%) Frame = +2 Query: 62 AAAPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKVIKVPEGFDYEL 241 ++ PSTPLLKDELDIVIPTIRNLDFLEMWR FFQPYHLIIVQDGDPTK IKVPEGFDYEL Sbjct: 10 SSTPSTPLLKDELDIVIPTIRNLDFLEMWRAFFQPYHLIIVQDGDPTKTIKVPEGFDYEL 69 Query: 242 YNRNDVNRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQ 421 YNRND+NRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQ Sbjct: 70 YNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQ 129 Query: 422 HIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQL 601 HIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGA TAVSHGLWLNIPDYDAPTQL Sbjct: 130 HIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAHTAVSHGLWLNIPDYDAPTQL 189 Query: 602 VKPLERNNRYVDAVLTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWA 781 VKP ERN RYVDAV+TIPKGTLFPMCGMNLAFDR+LIGPAMYFGLMGDGQPIGRYDDMWA Sbjct: 190 VKPKERNERYVDAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWA 249 Query: 782 GWCTKVITDHLSLGIKTGLPYIWHSKASNPFVNLKKEYNGIFWQEELIPFFQSVTLSKEA 961 GWC KVI DHLSLG+KTGLPYIWHSKASNPFVNLKKEY GIFWQE++IPFFQ+VT+ K+ Sbjct: 250 GWCVKVICDHLSLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQNVTIPKDC 309 Query: 962 TTVQKCYLELAKQVKAKLGKVDGYFNKLADAMVTWIEAWDELNP 1093 TVQKCY+ L+ QVK KLG +D YF KL DAMVTWIEAWDELNP Sbjct: 310 DTVQKCYIYLSGQVKEKLGTIDPYFVKLGDAMVTWIEAWDELNP 353
>Q8RU27:UPTG2_SOLTU Alpha-1,4-glucan-protein synthase [UDP-forming] 2 - Solanum tuberosum| (Potato) Length = 366 Score = 660 bits (1704), Expect = 0.0 Identities = 308/346 (89%), Positives = 323/346 (93%) Frame = +2 Query: 56 AMAAAPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKVIKVPEGFDY 235 A ++ TPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDP+K+I VPEGFDY Sbjct: 2 AGSSVTPTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIINVPEGFDY 61 Query: 236 ELYNRNDVNRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINAL 415 ELYNRND+NRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINAL Sbjct: 62 ELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINAL 121 Query: 416 EQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPT 595 EQHIKNLL PSTP FFNTLYDPYREGADFVRGYPFS+REGA TAVSHGLWLNIPDYDAPT Sbjct: 122 EQHIKNLLCPSTPHFFNTLYDPYREGADFVRGYPFSMREGAATAVSHGLWLNIPDYDAPT 181 Query: 596 QLVKPLERNNRYVDAVLTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDM 775 QLVKP ERN RYVDAV+TIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDM Sbjct: 182 QLVKPRERNTRYVDAVMTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDM 241 Query: 776 WAGWCTKVITDHLSLGIKTGLPYIWHSKASNPFVNLKKEYNGIFWQEELIPFFQSVTLSK 955 WAGWC KVI DHL LG+KTGLPYIWHSKASNPFVNLKKEY GI+WQEE+IPF QS TL K Sbjct: 242 WAGWCIKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEEIIPFSQSATLPK 301 Query: 956 EATTVQKCYLELAKQVKAKLGKVDGYFNKLADAMVTWIEAWDELNP 1093 + T+VQ+CYLEL+KQVK KL +D YF KLADAMVTWIEAWDELNP Sbjct: 302 DCTSVQQCYLELSKQVKEKLSTIDPYFTKLADAMVTWIEAWDELNP 347
>O04300:UPTG_PEA Alpha-1,4-glucan-protein synthase [UDP-forming] - Pisum sativum| (Garden pea) Length = 364 Score = 660 bits (1702), Expect = 0.0 Identities = 309/354 (87%), Positives = 329/354 (92%), Gaps = 1/354 (0%) Frame = +2 Query: 59 MAAAPS-TPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKVIKVPEGFDY 235 MA+ P TPLLKDELDIVIPTIRNLDFLEMWRPFF+ YHLIIVQDGDP+KVIKVPEGFDY Sbjct: 1 MASLPKPTPLLKDELDIVIPTIRNLDFLEMWRPFFEQYHLIIVQDGDPSKVIKVPEGFDY 60 Query: 236 ELYNRNDVNRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINAL 415 ELYNRND+NRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDP+G +INAL Sbjct: 61 ELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGHEINAL 120 Query: 416 EQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPT 595 EQHIKNLLSPSTPFFFNTLYDPYREG DFVRGYPFSLREG PTAVSHGLWLNIPDYDAPT Sbjct: 121 EQHIKNLLSPSTPFFFNTLYDPYREGTDFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPT 180 Query: 596 QLVKPLERNNRYVDAVLTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDM 775 QLVKP ERN R+VDAVLTIPKG+LFPMCGMNLAF+RELIGPAMYFGLMGDGQPIGRYDDM Sbjct: 181 QLVKPHERNTRFVDAVLTIPKGSLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDM 240 Query: 776 WAGWCTKVITDHLSLGIKTGLPYIWHSKASNPFVNLKKEYNGIFWQEELIPFFQSVTLSK 955 WAGWC KVI DHL G+KTGLPYIWHSKASNPFVNLKKEY GIFWQEE+IPFFQ+ TLSK Sbjct: 241 WAGWCIKVICDHLGYGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQAATLSK 300 Query: 956 EATTVQKCYLELAKQVKAKLGKVDGYFNKLADAMVTWIEAWDELNPPKGAITTT 1117 + T+VQKCY+EL+KQVK KLG +D YF KLADAMVTW+EAWDE+N K TT+ Sbjct: 301 DCTSVQKCYIELSKQVKEKLGTIDPYFIKLADAMVTWVEAWDEINNNKSEETTS 354
>P11088:FILA_MOUSE Filaggrin - Mus musculus (Mouse)| Length = 336 Score = 34.3 bits (77), Expect = 1.3 Identities = 29/92 (31%), Positives = 38/92 (41%) Frame = -1 Query: 707 AHGQTRGSFHTWETRYPSGL*EQHPHTYYFSQEA*QAG*GHHSLEC*ARAHEKQQLGHPH 528 AH Q+ G+ E R G QH YY+ QE HS E + + Q GH H Sbjct: 128 AHRQS-GAGQRHEQRSSRG---QHGSGYYYEQE--------HSEE---ESDSQHQHGHQH 172 Query: 527 EG*RGTHEQNQHPHGMGRTEY*RKMELKGSEG 432 E RG Q+QH H + E + + G Sbjct: 173 EQQRGHQHQHQHQHEHEQPESGHRQQQSSGRG 204
>P98160:PGBM_HUMAN Basement membrane-specific heparan sulfate proteoglycan core protein| precursor - Homo sapiens (Human) Length = 4391 Score = 33.1 bits (74), Expect = 2.9 Identities = 29/106 (27%), Positives = 38/106 (35%), Gaps = 10/106 (9%) Frame = +1 Query: 850 AQQSKQPVCELKEGIQRHLLAG---GADPLLPV----CDPLKGGHHCPEVLP*AGQASEG 1008 A ++QP GI + G DP L V C P G C + G Sbjct: 1091 ASYAQQPAESRVSGISMDVAVPEETGQDPALEVEQCSCPPGYRGPSCQD-------CDTG 1143 Query: 1009 EARQGGWLLQ---QAC*CHGHMDRGLGRA*PTKGCNHHHKQPCCEE 1137 R L + C CHGH + +GC HH + P CE+ Sbjct: 1144 YTRTPSGLYLGTCERCSCHGHSEACEPETGACQGCQHHTEGPRCEQ 1189
>P43635:CISY3_YEAST Citrate synthase 3 - Saccharomyces cerevisiae (Baker's yeast)| Length = 486 Score = 33.1 bits (74), Expect = 2.9 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%) Frame = +2 Query: 683 MNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVIT-DHLSLGIKTGLPYIWHSK 859 +NL L+ +Y + +G P+G+Y + WCT + + ++ G + S+ Sbjct: 202 LNLIASLPLLTGRIYSNITNEGHPLGQYSEE-VDWCTNICSLLGMTNGTNSSNTCNLTSQ 260 Query: 860 ASNPFVNLKKEYNGIFWQEE 919 S F+NL + Y GI E Sbjct: 261 QSLDFINLMRLYTGIHVDHE 280
>P34751:DDC_CAEEL Probable aromatic-L-amino-acid decarboxylase - Caenorhabditis| elegans Length = 905 Score = 32.7 bits (73), Expect = 3.8 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 7/74 (9%) Frame = +2 Query: 479 PYREGADFVRGYPFS---LREGAPTAVSHGLWLNIPDYDAPTQLVKP----LERNNRYVD 637 P+ GA+F P S L E P HG WL++ A T L+ P L R + D Sbjct: 581 PFFVGANFGTSGPCSFDHLHELGPVCREHGTWLHVDAAYAGTALICPEIRGLMRGIDWAD 640 Query: 638 AVLTIPKGTLFPMC 679 + T P + +C Sbjct: 641 SFCTTPSKLIIAVC 654
>P29642:CYB_THRDO Cytochrome b - Thripophaga dorbignyi (Creamy-breasted canastero)| Length = 308 Score = 32.7 bits (73), Expect = 3.8 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 2/106 (1%) Frame = -3 Query: 927 GISSSCQKMPLYSFF--KFTNGLLALLCQM*GRPVLIPRLK*SVITLVHHPAHISS*RPI 754 GISS+C K+P + +F K G LA+L + + P L+ P + + P+ Sbjct: 178 GISSNCDKIPFHPYFSTKDILGFLAMLVPLTALAMFSP-------NLLGDPENFTPANPL 230 Query: 753 GWPSPIRPKYIAGPMSSRSNARFIPHMGNKVPFGIVRTASTYLLFL 616 P I+P++ + + + R IP NK+ + AS +LFL Sbjct: 231 VTPPHIKPEWYF--LFAYAILRSIP---NKLGGVLALAASVLILFL 271
>Q822I4:EFTU_CHLCV Elongation factor Tu - Chlamydophila caviae| Length = 394 Score = 32.3 bits (72), Expect = 4.9 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 5/62 (8%) Frame = +2 Query: 632 VDAVLTIPKGTLFPMCGMNLAFDRELIGP-----AMYFGLMGDGQPIGRYDDMWAGWCTK 796 V V+T+P+GT M G N+ F+ +LI P M F + G+ IG AG +K Sbjct: 338 VTGVVTLPEGTEMVMPGDNVEFEVQLISPVALEEGMRFAIREGGRTIG------AGTISK 391 Query: 797 VI 802 +I Sbjct: 392 II 393
>P26035:C_MEASI Protein C - Measles virus (strain IP-3-Ca) (Subacute sclerose| panencephalitis virus) Length = 186 Score = 32.3 bits (72), Expect = 4.9 Identities = 19/42 (45%), Positives = 22/42 (52%) Frame = -1 Query: 1022 PCRASPSLAWPAQGNTSGQWWPPLRGSQTGRRGSAPPARRCR 897 P R SPS WP SG+ W + QT + S PPARR R Sbjct: 11 PSRPSPSAHWP-----SGKLWQHGQKYQTTQDRSRPPARRRR 47
>P20892:POL_HV1OY Gag-Pol polyprotein - Human immunodeficiency virus type 1 (isolate| OYI group M subtype B) (HIV-1) Length = 1434 Score = 32.0 bits (71), Expect = 6.4 Identities = 24/101 (23%), Positives = 40/101 (39%) Frame = -2 Query: 760 TNRLAITHKAKVHCRTNELTVKREVHSTHGKQGTLRDCKNSIHIPIISLKRLDKLGRGII 581 T + +T +A++ N +K VH G D + + L K G+G Sbjct: 876 TEVIPLTEEAELELAENREILKEPVH------GVYYDPSKDL------VAELQKQGQGQW 923 Query: 580 VWNVKPEPMRNSSWGTLTKAEGVPTNKISTLTVWVVQSIEE 458 + + EP +N G + G TN + LT V + +E Sbjct: 924 TYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITQE 964
>O94166:CREA_ASPAC DNA-binding protein creA - Aspergillus aculeatus| Length = 431 Score = 32.0 bits (71), Expect = 6.4 Identities = 23/57 (40%), Positives = 29/57 (50%) Frame = +3 Query: 987 SWPSK*RRSSARWMATSTSLLMPWSHGSRPGTSLTHQRVQSPPQTALL*RASERQ*H 1157 S PS + +S+ MA+S SLL P GSRP T Q + P + L RA R H Sbjct: 39 STPSSAQSTSS--MASSVSLLPPLMKGSRPATEEVRQDLPRPYKCPLCDRAFHRLEH 93
>P54760:EPHB4_HUMAN Ephrin type-B receptor 4 precursor - Homo sapiens (Human)| Length = 987 Score = 31.6 bits (70), Expect = 8.4 Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 6/87 (6%) Frame = -1 Query: 1022 PCRASPSLAWPAQGNTSG-----QWWPPLRGSQTGRRGSAPPARRCR-CIPSLSSQTGCL 861 PC PS +G +W PL ++G R A RCR C P S Sbjct: 319 PCTTPPSAPRSVVSRLNGSSLHLEWSAPL---ESGGREDLTYALRCRECRPGGS------ 369 Query: 860 LCCARCRADQS*YPGSNDQ*SPWCTIQ 780 CA C D + PG D PW ++ Sbjct: 370 --CAPCGGDLTFDPGPRDLVEPWVVVR 394
>Q9MLI3:CYB_CYAFO Cytochrome b - Cyanoramphus forbesi (Forbes' parakeet) (Chatham| parakeet) Length = 379 Score = 31.6 bits (70), Expect = 8.4 Identities = 29/105 (27%), Positives = 50/105 (47%) Frame = -3 Query: 927 GISSSCQKMPLYSFFKFTNGLLALLCQM*GRPVLIPRLK*SVITLVHHPAHISS*RPIGW 748 GISS+C K+P + +F + LL + + L+ L L+ P + + P+ Sbjct: 211 GISSNCDKIPFHPYFSLKD-LLGFMIML----FLLTTLALFSPNLLGDPENFTPANPLVT 265 Query: 747 PSPIRPKYIAGPMSSRSNARFIPHMGNKVPFGIVRTASTYLLFLS 613 P I+P++ + + + R IP NK+ + AS +LFLS Sbjct: 266 PPHIKPEWYF--LFAYAILRSIP---NKLGGVLALAASVLILFLS 305 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 245,631,303 Number of extensions: 5925854 Number of successful extensions: 17237 Number of sequences better than 10.0: 15 Number of HSP's gapped: 17229 Number of HSP's successfully gapped: 15 Length of query: 467 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 350 Effective length of database: 68,593,924 Effective search space: 24007873400 Effective search space used: 24007873400 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
