| Clone Name | FLbaf64e06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Q9CR67:TMM33_MOUSE Transmembrane protein 33 - Mus musculus (Mouse) | 42 | 0.011 | 2 | P57088:TMM33_HUMAN Transmembrane protein 33 - Homo sapiens (Human) | 41 | 0.024 | 3 | Q9Z142:TMM33_RAT Transmembrane protein 33 - Rattus norvegicus (Rat) | 40 | 0.031 | 4 | Q9XWV0:TMM33_CAEEL UPF0121 protein Y37D8A.17 - Caenorhabditis el... | 34 | 2.2 | 5 | Q8BKD6:IBRD2_MOUSE E3 ubiquitin-protein ligase IBRDC2 - Mus musc... | 33 | 6.5 |
|---|
>Q9CR67:TMM33_MOUSE Transmembrane protein 33 - Mus musculus (Mouse)| Length = 247 Score = 42.0 bits (97), Expect = 0.011 Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 5/107 (4%) Frame = +3 Query: 1470 MYCLMFVTSKLHLKLVLVPVICWALEHVARFLRRHF----TNS-SLYRAYLEPLCTWVEA 1634 +Y L+FV S + + + PV+ ++L H A + ++ +NS L R++L+ L T Sbjct: 97 LYSLIFVNS-YPVTMSIFPVLLFSLLHAATYTKKVLDAKGSNSLPLLRSFLDKLST---- 151 Query: 1635 NTTAVNFLIANAEILLGFLMILSLFSKQRNAMQTFMYWQLLKLMYHS 1775 N + IA EI L + LFS Q + +Q F+Y++ L L Y S Sbjct: 152 NQQNILKFIACNEIFLMPATVFMLFSGQGSLLQPFIYYRFLTLRYSS 198
>P57088:TMM33_HUMAN Transmembrane protein 33 - Homo sapiens (Human)| Length = 247 Score = 40.8 bits (94), Expect = 0.024 Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 5/107 (4%) Frame = +3 Query: 1470 MYCLMFVTSKLHLKLVLVPVICWALEHVARFLR-----RHFTNSSLYRAYLEPLCTWVEA 1634 +Y L+FV S + + + PV+ ++L H A + + R + L R+ L+ L A Sbjct: 97 LYSLIFVNS-YPVTMSIFPVLLFSLLHAATYTKKVLDARGSNSLPLLRSVLDKL----SA 151 Query: 1635 NTTAVNFLIANAEILLGFLMILSLFSKQRNAMQTFMYWQLLKLMYHS 1775 N + IA EI L + LFS Q + +Q F+Y++ L L Y S Sbjct: 152 NQQNILKFIACNEIFLMPATVFMLFSGQGSLLQPFIYYRFLTLRYSS 198
>Q9Z142:TMM33_RAT Transmembrane protein 33 - Rattus norvegicus (Rat)| Length = 247 Score = 40.4 bits (93), Expect = 0.031 Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 5/107 (4%) Frame = +3 Query: 1470 MYCLMFVTSKLHLKLVLVPVICWALEHVARFLRRHF----TNS-SLYRAYLEPLCTWVEA 1634 +Y L+FV S + + + PV+ ++L H A + ++ +NS L R+ L+ L T Sbjct: 97 LYSLIFVNS-YPVTMSIFPVLLFSLLHAATYTKKVLDAKGSNSLPLLRSVLDKLST---- 151 Query: 1635 NTTAVNFLIANAEILLGFLMILSLFSKQRNAMQTFMYWQLLKLMYHS 1775 N + IA EI L + LFS Q + +Q F+Y++ L L Y S Sbjct: 152 NQQNILKFIACNEIFLMPATVFMLFSGQGSLLQPFIYYRFLTLRYSS 198
>Q9XWV0:TMM33_CAEEL UPF0121 protein Y37D8A.17 - Caenorhabditis elegans| Length = 271 Score = 34.3 bits (77), Expect = 2.2 Identities = 28/129 (21%), Positives = 56/129 (43%) Frame = +3 Query: 1470 MYCLMFVTSKLHLKLVLVPVICWALEHVARFLRRHFTNSSLYRAYLEPLCTWVEANTTAV 1649 +Y ++F+ + + + +PV +A H F+ + + + + L + T Sbjct: 122 VYSVVFLMAA-PVSMAALPVTIYAALHACTFMTKILRETGHTSSIIPKLEQFTAHQTQNA 180 Query: 1650 NFLIANAEILLGFLMILSLFSKQRNAMQTFMYWQLLKLMYHSPLTAGYHRAIWLKIGRTA 1829 +IA +EI L L++ +FS + + + F Y++ L L Y S +A G Sbjct: 181 LGIIACSEIFLVPLLVSLIFSGKGSLLLPFAYYRFLSLRYASRRNPSTRQAFAQMRGSLQ 240 Query: 1830 NPYINSYTP 1856 N ++S P Sbjct: 241 NVAMSSSCP 249
>Q8BKD6:IBRD2_MOUSE E3 ubiquitin-protein ligase IBRDC2 - Mus musculus (Mouse)| Length = 301 Score = 32.7 bits (73), Expect = 6.5 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 7/39 (17%) Frame = -3 Query: 1673 LCICNQKVD-------CSCVCLNPCAKRLQVCPVQRGIG 1578 LC+C Q +D C C+ PC K+ V ++ G G Sbjct: 32 LCLCEQSLDKMTMLQECQCIFCTPCLKQYMVLSIREGCG 70 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 362,712,415 Number of extensions: 7498250 Number of successful extensions: 15170 Number of sequences better than 10.0: 5 Number of HSP's gapped: 15169 Number of HSP's successfully gapped: 5 Length of query: 736 Length of database: 100,686,439 Length adjustment: 121 Effective length of query: 615 Effective length of database: 67,496,744 Effective search space: 41510497560 Effective search space used: 41510497560 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)