ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf64e06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT830825.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA128K09, full insert sequence Length = 1269 Score = 589 bits (297), Expect = e-164 Identities = 563/651 (86%), Gaps = 3/651 (0%) Strand = Plus / Plus Query: 1265 ggttcttattgttgcgctgatcggcatcattccactggcaacacgacaactgcaactcaa 1324 ||||||||||||||| |||| || ||| |||||||| || |||||||||||||| || Sbjct: 373 ggttcttattgttgcattgattggaatccttccactgacaccacgacaactgcaatataa 432 Query: 1325 gggatatcgtttgtcacttcttggcacaacctgtaccacaggttataccatatttgctct 1384 ||||||||||||||||||||| ||||||||||| |||||||| ||| | | |||||| | Sbjct: 433 gggatatcgtttgtcacttctcggcacaacctgcaccacaggctatgctttgtttgcttt 492 Query: 1385 ttatgggctacccagagtagggaacgtgcaggctgttcaggcctggtgccaccatgtaac 1444 |||| ||||||| |||| ||| ||| |||| |||| |||| || ||||||||| | Sbjct: 493 ttatcggctaccaagagcaggaaacatgcatgctgctcagatcttt---caccatgtagc 549 Query: 1445 ttcatcaaaggattttatacctttcatgtactgccttatgtttgttacatctaaactaca 1504 ||| ||||||||||||||||| ||||||||||| ||||||||||| | |||||||| || Sbjct: 550 ttcgtcaaaggattttataccattcatgtactgtcttatgtttgtcatgtctaaactgca 609 Query: 1505 cttgaagcttgttttggtaccggtaatttgttgggcacttgaacatgtggccagatttct 1564 ||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| Sbjct: 610 cttgaagcttgttttggtaccagtgatttgctgggcacttgaacatgtggccagatttct 669 Query: 1565 acggcgccattttaccaattcctctctgtacagggcatacctggagccgctttgcacatg 1624 ||||||||||||||| ||||||||||| |||||| |||| |||||| | ||||||||| Sbjct: 670 acggcgccattttactaattcctctctatacaggacatatctggagaaaccttgcacatg 729 Query: 1625 ggttgaggcaaacacaactgcagtcaactttctgattgcaaatgcagagattttgttggg 1684 ||||||| ||||||||||||||||||| || |||| | ||||||| |||||||||||||| Sbjct: 730 ggttgagacaaacacaactgcagtcaaattcctgagttcaaatgcggagattttgttggg 789 Query: 1685 ctttcttatgatcttatccctgttctcgaaacaacgcaatgctatgcaaacattcatgta 1744 |||||| |||| || || ||||||||| |||||||||| |||||||||| |||||||| Sbjct: 790 atttcttttgattttgtctctgttctcgcgacaacgcaatcctatgcaaacgttcatgta 849 Query: 1745 ctggcagttgttgaagctaatgtatcattctcctttaactgctggctaccacagagctat 1804 ||||||||| ||||||| |||||||| |||||||| ||||| || || ||||||||||| Sbjct: 850 ctggcagttactgaagctcatgtatcactctcctttcactgccggttatcacagagctat 909 Query: 1805 ctggctaaagattggccggacagctaacccctacatcaacagttacaccccttttcttca 1864 |||||| || |||||||| |||| ||| ||||| ||| | | ||||| ||||||||||| Sbjct: 910 ctggcttaaaattggccgtacagttaatccctatatccatcgctacactccttttcttca 969 Query: 1865 tgacccgataaacgccggcatgagatggtggttcaggtaggatggatatgg 1915 |||||||||||| || |||||||||||||||||||||||| |||||||||| Sbjct: 970 tgacccgataaatgctggcatgagatggtggttcaggtagcatggatatgg 1020 Score = 87.7 bits (44), Expect = 2e-13 Identities = 68/76 (89%) Strand = Plus / Plus Query: 441 ctgctggaccagcacaaagcagactttcgctgcagttggatcagcggtcattacattttt 500 |||||||||| ||| ||||||| || | ||||||||||||||||||||||| ||||||| Sbjct: 300 ctgctggacccgcaagaagcagaattgcactgcagttggatcagcggtcattgcattttt 359 Query: 501 ctgttaatgcttgggt 516 |||||| ||||||||| Sbjct: 360 ctgttactgcttgggt 375
>ref|NM_001050221.1| Oryza sativa (japonica cultivar-group) Os01g0641700 (Os01g0641700) mRNA, complete cds Length = 1359 Score = 589 bits (297), Expect = e-164 Identities = 563/651 (86%), Gaps = 3/651 (0%) Strand = Plus / Plus Query: 1265 ggttcttattgttgcgctgatcggcatcattccactggcaacacgacaactgcaactcaa 1324 ||||||||||||||| |||| || ||| |||||||| || |||||||||||||| || Sbjct: 465 ggttcttattgttgcattgattggaatccttccactgacaccacgacaactgcaatataa 524 Query: 1325 gggatatcgtttgtcacttcttggcacaacctgtaccacaggttataccatatttgctct 1384 ||||||||||||||||||||| ||||||||||| |||||||| ||| | | |||||| | Sbjct: 525 gggatatcgtttgtcacttctcggcacaacctgcaccacaggctatgctttgtttgcttt 584 Query: 1385 ttatgggctacccagagtagggaacgtgcaggctgttcaggcctggtgccaccatgtaac 1444 |||| ||||||| |||| ||| ||| |||| |||| |||| || ||||||||| | Sbjct: 585 ttatcggctaccaagagcaggaaacatgcatgctgctcagatcttt---caccatgtagc 641 Query: 1445 ttcatcaaaggattttatacctttcatgtactgccttatgtttgttacatctaaactaca 1504 ||| ||||||||||||||||| ||||||||||| ||||||||||| | |||||||| || Sbjct: 642 ttcgtcaaaggattttataccattcatgtactgtcttatgtttgtcatgtctaaactgca 701 Query: 1505 cttgaagcttgttttggtaccggtaatttgttgggcacttgaacatgtggccagatttct 1564 ||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| Sbjct: 702 cttgaagcttgttttggtaccagtgatttgctgggcacttgaacatgtggccagatttct 761 Query: 1565 acggcgccattttaccaattcctctctgtacagggcatacctggagccgctttgcacatg 1624 ||||||||||||||| ||||||||||| |||||| |||| |||||| | ||||||||| Sbjct: 762 acggcgccattttactaattcctctctatacaggacatatctggagaaaccttgcacatg 821 Query: 1625 ggttgaggcaaacacaactgcagtcaactttctgattgcaaatgcagagattttgttggg 1684 ||||||| ||||||||||||||||||| || |||| | ||||||| |||||||||||||| Sbjct: 822 ggttgagacaaacacaactgcagtcaaattcctgagttcaaatgcggagattttgttggg 881 Query: 1685 ctttcttatgatcttatccctgttctcgaaacaacgcaatgctatgcaaacattcatgta 1744 |||||| |||| || || ||||||||| |||||||||| |||||||||| |||||||| Sbjct: 882 atttcttttgattttgtctctgttctcgcgacaacgcaatcctatgcaaacgttcatgta 941 Query: 1745 ctggcagttgttgaagctaatgtatcattctcctttaactgctggctaccacagagctat 1804 ||||||||| ||||||| |||||||| |||||||| ||||| || || ||||||||||| Sbjct: 942 ctggcagttactgaagctcatgtatcactctcctttcactgccggttatcacagagctat 1001 Query: 1805 ctggctaaagattggccggacagctaacccctacatcaacagttacaccccttttcttca 1864 |||||| || |||||||| |||| ||| ||||| ||| | | ||||| ||||||||||| Sbjct: 1002 ctggcttaaaattggccgtacagttaatccctatatccatcgctacactccttttcttca 1061 Query: 1865 tgacccgataaacgccggcatgagatggtggttcaggtaggatggatatgg 1915 |||||||||||| || |||||||||||||||||||||||| |||||||||| Sbjct: 1062 tgacccgataaatgctggcatgagatggtggttcaggtagcatggatatgg 1112 Score = 87.7 bits (44), Expect = 2e-13 Identities = 68/76 (89%) Strand = Plus / Plus Query: 441 ctgctggaccagcacaaagcagactttcgctgcagttggatcagcggtcattacattttt 500 |||||||||| ||| ||||||| || | ||||||||||||||||||||||| ||||||| Sbjct: 392 ctgctggacccgcaagaagcagaattgcactgcagttggatcagcggtcattgcattttt 451 Query: 501 ctgttaatgcttgggt 516 |||||| ||||||||| Sbjct: 452 ctgttactgcttgggt 467
>dbj|AK103294.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125A17, full insert sequence Length = 1361 Score = 589 bits (297), Expect = e-164 Identities = 563/651 (86%), Gaps = 3/651 (0%) Strand = Plus / Plus Query: 1265 ggttcttattgttgcgctgatcggcatcattccactggcaacacgacaactgcaactcaa 1324 ||||||||||||||| |||| || ||| |||||||| || |||||||||||||| || Sbjct: 466 ggttcttattgttgcattgattggaatccttccactgacaccacgacaactgcaatataa 525 Query: 1325 gggatatcgtttgtcacttcttggcacaacctgtaccacaggttataccatatttgctct 1384 ||||||||||||||||||||| ||||||||||| |||||||| ||| | | |||||| | Sbjct: 526 gggatatcgtttgtcacttctcggcacaacctgcaccacaggctatgctttgtttgcttt 585 Query: 1385 ttatgggctacccagagtagggaacgtgcaggctgttcaggcctggtgccaccatgtaac 1444 |||| ||||||| |||| ||| ||| |||| |||| |||| || ||||||||| | Sbjct: 586 ttatcggctaccaagagcaggaaacatgcatgctgctcagatcttt---caccatgtagc 642 Query: 1445 ttcatcaaaggattttatacctttcatgtactgccttatgtttgttacatctaaactaca 1504 ||| ||||||||||||||||| ||||||||||| ||||||||||| | |||||||| || Sbjct: 643 ttcgtcaaaggattttataccattcatgtactgtcttatgtttgtcatgtctaaactgca 702 Query: 1505 cttgaagcttgttttggtaccggtaatttgttgggcacttgaacatgtggccagatttct 1564 ||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| Sbjct: 703 cttgaagcttgttttggtaccagtgatttgctgggcacttgaacatgtggccagatttct 762 Query: 1565 acggcgccattttaccaattcctctctgtacagggcatacctggagccgctttgcacatg 1624 ||||||||||||||| ||||||||||| |||||| |||| |||||| | ||||||||| Sbjct: 763 acggcgccattttactaattcctctctatacaggacatatctggagaaaccttgcacatg 822 Query: 1625 ggttgaggcaaacacaactgcagtcaactttctgattgcaaatgcagagattttgttggg 1684 ||||||| ||||||||||||||||||| || |||| | ||||||| |||||||||||||| Sbjct: 823 ggttgagacaaacacaactgcagtcaaattcctgagttcaaatgcggagattttgttggg 882 Query: 1685 ctttcttatgatcttatccctgttctcgaaacaacgcaatgctatgcaaacattcatgta 1744 |||||| |||| || || ||||||||| |||||||||| |||||||||| |||||||| Sbjct: 883 atttcttttgattttgtctctgttctcgcgacaacgcaatcctatgcaaacgttcatgta 942 Query: 1745 ctggcagttgttgaagctaatgtatcattctcctttaactgctggctaccacagagctat 1804 ||||||||| ||||||| |||||||| |||||||| ||||| || || ||||||||||| Sbjct: 943 ctggcagttactgaagctcatgtatcactctcctttcactgccggttatcacagagctat 1002 Query: 1805 ctggctaaagattggccggacagctaacccctacatcaacagttacaccccttttcttca 1864 |||||| || |||||||| |||| ||| ||||| ||| | | ||||| ||||||||||| Sbjct: 1003 ctggcttaaaattggccgtacagttaatccctatatccatcgctacactccttttcttca 1062 Query: 1865 tgacccgataaacgccggcatgagatggtggttcaggtaggatggatatgg 1915 |||||||||||| || |||||||||||||||||||||||| |||||||||| Sbjct: 1063 tgacccgataaatgctggcatgagatggtggttcaggtagcatggatatgg 1113 Score = 87.7 bits (44), Expect = 2e-13 Identities = 68/76 (89%) Strand = Plus / Plus Query: 441 ctgctggaccagcacaaagcagactttcgctgcagttggatcagcggtcattacattttt 500 |||||||||| ||| ||||||| || | ||||||||||||||||||||||| ||||||| Sbjct: 393 ctgctggacccgcaagaagcagaattgcactgcagttggatcagcggtcattgcattttt 452 Query: 501 ctgttaatgcttgggt 516 |||||| ||||||||| Sbjct: 453 ctgttactgcttgggt 468
>emb|CT830826.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN059F19, full insert sequence Length = 1577 Score = 418 bits (211), Expect = e-113 Identities = 355/403 (88%) Strand = Plus / Plus Query: 1513 ttgttttggtaccggtaatttgttgggcacttgaacatgtggccagatttctacggcgcc 1572 ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 931 ttgttttggtaccagtgatttgctgggcacttgaacatgtggccagatttctacggcgcc 990 Query: 1573 attttaccaattcctctctgtacagggcatacctggagccgctttgcacatgggttgagg 1632 ||||||| ||||||||||| |||||| |||| |||||| | |||||||||||||||| Sbjct: 991 attttactaattcctctctatacaggacatatctggagaaaccttgcacatgggttgaga 1050 Query: 1633 caaacacaactgcagtcaactttctgattgcaaatgcagagattttgttgggctttctta 1692 ||||||||||||||||||| || |||| | ||||||| |||||||||||||| |||||| Sbjct: 1051 caaacacaactgcagtcaaattcctgagttcaaatgcggagattttgttgggatttcttt 1110 Query: 1693 tgatcttatccctgttctcgaaacaacgcaatgctatgcaaacattcatgtactggcagt 1752 |||| || || ||||||||| |||||||||| |||||||||| |||||||||||||||| Sbjct: 1111 tgattttgtctctgttctcgcgacaacgcaatcctatgcaaacgttcatgtactggcagt 1170 Query: 1753 tgttgaagctaatgtatcattctcctttaactgctggctaccacagagctatctggctaa 1812 | ||||||| |||||||| |||||||| ||||| || || ||||||||||||||||| | Sbjct: 1171 tactgaagctcatgtatcactctcctttcactgccggttatcacagagctatctggctta 1230 Query: 1813 agattggccggacagctaacccctacatcaacagttacaccccttttcttcatgacccga 1872 | |||||||| |||| ||| ||||| ||| | | ||||| ||||||||||||||||||| Sbjct: 1231 aaattggccgtacagttaatccctatatccatcgctacactccttttcttcatgacccga 1290 Query: 1873 taaacgccggcatgagatggtggttcaggtaggatggatatgg 1915 |||| || |||||||||||||||||||||||| |||||||||| Sbjct: 1291 taaatgctggcatgagatggtggttcaggtagcatggatatgg 1333 Score = 172 bits (87), Expect = 3e-39 Identities = 209/249 (83%), Gaps = 3/249 (1%) Strand = Plus / Plus Query: 1264 aggttcttattgttgcgctgatcggcatcattccactggcaacacgacaactgcaactca 1323 |||||||||||||||| |||| || ||| |||||||| || |||||||||||||| | Sbjct: 593 aggttcttattgttgcattgattggaatccttccactgacaccacgacaactgcaatata 652 Query: 1324 agggatatcgtttgtcacttcttggcacaacctgtaccacaggttataccatatttgctc 1383 |||||||||||||||||||||| ||||||||||| |||||||| ||| | | |||||| Sbjct: 653 agggatatcgtttgtcacttctcggcacaacctgcaccacaggctatgctttgtttgctt 712 Query: 1384 tttatgggctacccagagtagggaacgtgcaggctgttcaggcctggtgccaccatgtaa 1443 ||||| ||||||| |||| ||| ||| |||| |||| |||| | | ||||||||| Sbjct: 713 tttatcggctaccaagagcaggaaacatgcatgctgctcagatc---tttcaccatgtag 769 Query: 1444 cttcatcaaaggattttatacctttcatgtactgccttatgtttgttacatctaaactac 1503 |||| ||||||||||||||||| ||||||||||| ||||||||||| | |||||||| | Sbjct: 770 cttcgtcaaaggattttataccattcatgtactgtcttatgtttgtcatgtctaaactgc 829 Query: 1504 acttgaagc 1512 ||||||||| Sbjct: 830 acttgaagc 838 Score = 101 bits (51), Expect = 1e-17 Identities = 78/87 (89%) Strand = Plus / Plus Query: 441 ctgctggaccagcacaaagcagactttcgctgcagttggatcagcggtcattacattttt 500 |||||||||| ||| ||||||| || | ||||||||||||||||||||||| ||||||| Sbjct: 351 ctgctggacccgcaagaagcagaattgcactgcagttggatcagcggtcattgcattttt 410 Query: 501 ctgttaatgcttgggtaaatggcttaa 527 |||||| ||||||||||||||| |||| Sbjct: 411 ctgttactgcttgggtaaatggattaa 437
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 159 bits (80), Expect = 5e-35 Identities = 140/160 (87%) Strand = Plus / Minus Query: 1756 tgaagctaatgtatcattctcctttaactgctggctaccacagagctatctggctaaaga 1815 ||||||| |||||||| |||||||| ||||| || || ||||||||||||||||| || | Sbjct: 25771730 tgaagctcatgtatcactctcctttcactgccggttatcacagagctatctggcttaaaa 25771671 Query: 1816 ttggccggacagctaacccctacatcaacagttacaccccttttcttcatgacccgataa 1875 ||||||| |||| ||| ||||| ||| | | ||||| |||||||||||||||||||||| Sbjct: 25771670 ttggccgtacagttaatccctatatccatcgctacactccttttcttcatgacccgataa 25771611 Query: 1876 acgccggcatgagatggtggttcaggtaggatggatatgg 1915 | || |||||||||||||||||||||||| |||||||||| Sbjct: 25771610 atgctggcatgagatggtggttcaggtagcatggatatgg 25771571 Score = 131 bits (66), Expect = 1e-26 Identities = 81/86 (94%) Strand = Plus / Minus Query: 1513 ttgttttggtaccggtaatttgttgggcacttgaacatgtggccagatttctacggcgcc 1572 ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 25773274 ttgttttggtaccagtgatttgctgggcacttgaacatgtggccagatttctacggcgcc 25773215 Query: 1573 attttaccaattcctctctgtacagg 1598 ||||||| ||||||||||| |||||| Sbjct: 25773214 attttactaattcctctctatacagg 25773189 Score = 111 bits (56), Expect = 1e-20 Identities = 92/104 (88%) Strand = Plus / Minus Query: 1263 taggttcttattgttgcgctgatcggcatcattccactggcaacacgacaactgcaactc 1322 ||||||||||||||||| |||| || ||| |||||||| || |||||||||||||| Sbjct: 25773691 taggttcttattgttgcattgattggaatccttccactgacaccacgacaactgcaatat 25773632 Query: 1323 aagggatatcgtttgtcacttcttggcacaacctgtaccacagg 1366 ||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 25773631 aagggatatcgtttgtcacttctcggcacaacctgcaccacagg 25773588 Score = 105 bits (53), Expect = 7e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 1616 ttgcacatgggttgaggcaaacacaactgcagtcaactttctgattgcaaatgcagagat 1675 |||||||||||||||| ||||||||||||||||||| || |||| | ||||||| ||||| Sbjct: 25772552 ttgcacatgggttgagacaaacacaactgcagtcaaattcctgagttcaaatgcggagat 25772493 Query: 1676 tttgttgggctttcttatgatcttatccctgttctcg 1712 ||||||||| |||||| |||| || || ||||||||| Sbjct: 25772492 tttgttgggatttcttttgattttgtctctgttctcg 25772456 Score = 101 bits (51), Expect = 1e-17 Identities = 78/87 (89%) Strand = Plus / Minus Query: 441 ctgctggaccagcacaaagcagactttcgctgcagttggatcagcggtcattacattttt 500 |||||||||| ||| ||||||| || | ||||||||||||||||||||||| ||||||| Sbjct: 25774309 ctgctggacccgcaagaagcagaattgcactgcagttggatcagcggtcattgcattttt 25774250 Query: 501 ctgttaatgcttgggtaaatggcttaa 527 |||||| ||||||||||||||| |||| Sbjct: 25774249 ctgttactgcttgggtaaatggattaa 25774223 Score = 93.7 bits (47), Expect = 3e-15 Identities = 71/79 (89%) Strand = Plus / Minus Query: 1434 caccatgtaacttcatcaaaggattttatacctttcatgtactgccttatgtttgttaca 1493 ||||||||| |||| ||||||||||||||||| ||||||||||| ||||||||||| | Sbjct: 25773445 caccatgtagcttcgtcaaaggattttataccattcatgtactgtcttatgtttgtcatg 25773386 Query: 1494 tctaaactacacttgaagc 1512 |||||||| |||||||||| Sbjct: 25773385 tctaaactgcacttgaagc 25773367 Score = 58.0 bits (29), Expect = 1e-04 Identities = 35/37 (94%) Strand = Plus / Minus Query: 1715 acaacgcaatgctatgcaaacattcatgtactggcag 1751 |||||||||| |||||||||| ||||||||||||||| Sbjct: 25772362 acaacgcaatcctatgcaaacgttcatgtactggcag 25772326 Score = 50.1 bits (25), Expect = 0.035 Identities = 37/41 (90%) Strand = Plus / Minus Query: 1149 ttgtatgctttcttttagcttgcatgtattaatgatgagca 1189 |||||||| || ||||||||| ||||||||||| ||||||| Sbjct: 25773832 ttgtatgccttgttttagcttccatgtattaatcatgagca 25773792
>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039G05 Length = 138429 Score = 159 bits (80), Expect = 5e-35 Identities = 140/160 (87%) Strand = Plus / Minus Query: 1756 tgaagctaatgtatcattctcctttaactgctggctaccacagagctatctggctaaaga 1815 ||||||| |||||||| |||||||| ||||| || || ||||||||||||||||| || | Sbjct: 74194 tgaagctcatgtatcactctcctttcactgccggttatcacagagctatctggcttaaaa 74135 Query: 1816 ttggccggacagctaacccctacatcaacagttacaccccttttcttcatgacccgataa 1875 ||||||| |||| ||| ||||| ||| | | ||||| |||||||||||||||||||||| Sbjct: 74134 ttggccgtacagttaatccctatatccatcgctacactccttttcttcatgacccgataa 74075 Query: 1876 acgccggcatgagatggtggttcaggtaggatggatatgg 1915 | || |||||||||||||||||||||||| |||||||||| Sbjct: 74074 atgctggcatgagatggtggttcaggtagcatggatatgg 74035 Score = 131 bits (66), Expect = 1e-26 Identities = 81/86 (94%) Strand = Plus / Minus Query: 1513 ttgttttggtaccggtaatttgttgggcacttgaacatgtggccagatttctacggcgcc 1572 ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75738 ttgttttggtaccagtgatttgctgggcacttgaacatgtggccagatttctacggcgcc 75679 Query: 1573 attttaccaattcctctctgtacagg 1598 ||||||| ||||||||||| |||||| Sbjct: 75678 attttactaattcctctctatacagg 75653 Score = 111 bits (56), Expect = 1e-20 Identities = 92/104 (88%) Strand = Plus / Minus Query: 1263 taggttcttattgttgcgctgatcggcatcattccactggcaacacgacaactgcaactc 1322 ||||||||||||||||| |||| || ||| |||||||| || |||||||||||||| Sbjct: 76155 taggttcttattgttgcattgattggaatccttccactgacaccacgacaactgcaatat 76096 Query: 1323 aagggatatcgtttgtcacttcttggcacaacctgtaccacagg 1366 ||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 76095 aagggatatcgtttgtcacttctcggcacaacctgcaccacagg 76052 Score = 105 bits (53), Expect = 7e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 1616 ttgcacatgggttgaggcaaacacaactgcagtcaactttctgattgcaaatgcagagat 1675 |||||||||||||||| ||||||||||||||||||| || |||| | ||||||| ||||| Sbjct: 75016 ttgcacatgggttgagacaaacacaactgcagtcaaattcctgagttcaaatgcggagat 74957 Query: 1676 tttgttgggctttcttatgatcttatccctgttctcg 1712 ||||||||| |||||| |||| || || ||||||||| Sbjct: 74956 tttgttgggatttcttttgattttgtctctgttctcg 74920 Score = 101 bits (51), Expect = 1e-17 Identities = 78/87 (89%) Strand = Plus / Minus Query: 441 ctgctggaccagcacaaagcagactttcgctgcagttggatcagcggtcattacattttt 500 |||||||||| ||| ||||||| || | ||||||||||||||||||||||| ||||||| Sbjct: 76773 ctgctggacccgcaagaagcagaattgcactgcagttggatcagcggtcattgcattttt 76714 Query: 501 ctgttaatgcttgggtaaatggcttaa 527 |||||| ||||||||||||||| |||| Sbjct: 76713 ctgttactgcttgggtaaatggattaa 76687 Score = 93.7 bits (47), Expect = 3e-15 Identities = 71/79 (89%) Strand = Plus / Minus Query: 1434 caccatgtaacttcatcaaaggattttatacctttcatgtactgccttatgtttgttaca 1493 ||||||||| |||| ||||||||||||||||| ||||||||||| ||||||||||| | Sbjct: 75909 caccatgtagcttcgtcaaaggattttataccattcatgtactgtcttatgtttgtcatg 75850 Query: 1494 tctaaactacacttgaagc 1512 |||||||| |||||||||| Sbjct: 75849 tctaaactgcacttgaagc 75831 Score = 58.0 bits (29), Expect = 1e-04 Identities = 35/37 (94%) Strand = Plus / Minus Query: 1715 acaacgcaatgctatgcaaacattcatgtactggcag 1751 |||||||||| |||||||||| ||||||||||||||| Sbjct: 74826 acaacgcaatcctatgcaaacgttcatgtactggcag 74790 Score = 50.1 bits (25), Expect = 0.035 Identities = 37/41 (90%) Strand = Plus / Minus Query: 1149 ttgtatgctttcttttagcttgcatgtattaatgatgagca 1189 |||||||| || ||||||||| ||||||||||| ||||||| Sbjct: 76296 ttgtatgccttgttttagcttccatgtattaatcatgagca 76256
>dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510C12 Length = 177049 Score = 159 bits (80), Expect = 5e-35 Identities = 140/160 (87%) Strand = Plus / Minus Query: 1756 tgaagctaatgtatcattctcctttaactgctggctaccacagagctatctggctaaaga 1815 ||||||| |||||||| |||||||| ||||| || || ||||||||||||||||| || | Sbjct: 11654 tgaagctcatgtatcactctcctttcactgccggttatcacagagctatctggcttaaaa 11595 Query: 1816 ttggccggacagctaacccctacatcaacagttacaccccttttcttcatgacccgataa 1875 ||||||| |||| ||| ||||| ||| | | ||||| |||||||||||||||||||||| Sbjct: 11594 ttggccgtacagttaatccctatatccatcgctacactccttttcttcatgacccgataa 11535 Query: 1876 acgccggcatgagatggtggttcaggtaggatggatatgg 1915 | || |||||||||||||||||||||||| |||||||||| Sbjct: 11534 atgctggcatgagatggtggttcaggtagcatggatatgg 11495 Score = 131 bits (66), Expect = 1e-26 Identities = 81/86 (94%) Strand = Plus / Minus Query: 1513 ttgttttggtaccggtaatttgttgggcacttgaacatgtggccagatttctacggcgcc 1572 ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 13198 ttgttttggtaccagtgatttgctgggcacttgaacatgtggccagatttctacggcgcc 13139 Query: 1573 attttaccaattcctctctgtacagg 1598 ||||||| ||||||||||| |||||| Sbjct: 13138 attttactaattcctctctatacagg 13113 Score = 111 bits (56), Expect = 1e-20 Identities = 92/104 (88%) Strand = Plus / Minus Query: 1263 taggttcttattgttgcgctgatcggcatcattccactggcaacacgacaactgcaactc 1322 ||||||||||||||||| |||| || ||| |||||||| || |||||||||||||| Sbjct: 13615 taggttcttattgttgcattgattggaatccttccactgacaccacgacaactgcaatat 13556 Query: 1323 aagggatatcgtttgtcacttcttggcacaacctgtaccacagg 1366 ||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 13555 aagggatatcgtttgtcacttctcggcacaacctgcaccacagg 13512 Score = 105 bits (53), Expect = 7e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 1616 ttgcacatgggttgaggcaaacacaactgcagtcaactttctgattgcaaatgcagagat 1675 |||||||||||||||| ||||||||||||||||||| || |||| | ||||||| ||||| Sbjct: 12476 ttgcacatgggttgagacaaacacaactgcagtcaaattcctgagttcaaatgcggagat 12417 Query: 1676 tttgttgggctttcttatgatcttatccctgttctcg 1712 ||||||||| |||||| |||| || || ||||||||| Sbjct: 12416 tttgttgggatttcttttgattttgtctctgttctcg 12380 Score = 101 bits (51), Expect = 1e-17 Identities = 78/87 (89%) Strand = Plus / Minus Query: 441 ctgctggaccagcacaaagcagactttcgctgcagttggatcagcggtcattacattttt 500 |||||||||| ||| ||||||| || | ||||||||||||||||||||||| ||||||| Sbjct: 14233 ctgctggacccgcaagaagcagaattgcactgcagttggatcagcggtcattgcattttt 14174 Query: 501 ctgttaatgcttgggtaaatggcttaa 527 |||||| ||||||||||||||| |||| Sbjct: 14173 ctgttactgcttgggtaaatggattaa 14147 Score = 93.7 bits (47), Expect = 3e-15 Identities = 71/79 (89%) Strand = Plus / Minus Query: 1434 caccatgtaacttcatcaaaggattttatacctttcatgtactgccttatgtttgttaca 1493 ||||||||| |||| ||||||||||||||||| ||||||||||| ||||||||||| | Sbjct: 13369 caccatgtagcttcgtcaaaggattttataccattcatgtactgtcttatgtttgtcatg 13310 Query: 1494 tctaaactacacttgaagc 1512 |||||||| |||||||||| Sbjct: 13309 tctaaactgcacttgaagc 13291 Score = 58.0 bits (29), Expect = 1e-04 Identities = 35/37 (94%) Strand = Plus / Minus Query: 1715 acaacgcaatgctatgcaaacattcatgtactggcag 1751 |||||||||| |||||||||| ||||||||||||||| Sbjct: 12286 acaacgcaatcctatgcaaacgttcatgtactggcag 12250 Score = 50.1 bits (25), Expect = 0.035 Identities = 37/41 (90%) Strand = Plus / Minus Query: 1149 ttgtatgctttcttttagcttgcatgtattaatgatgagca 1189 |||||||| || ||||||||| ||||||||||| ||||||| Sbjct: 13756 ttgtatgccttgttttagcttccatgtattaatcatgagca 13716
>ref|NM_001063014.1| Oryza sativa (japonica cultivar-group) Os05g0589000 (Os05g0589000) mRNA, complete cds Length = 1499 Score = 61.9 bits (31), Expect = 9e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 1734 acattcatgtactggcagttgttgaagctaatgtatcattctcctttaactgctggctac 1793 |||||||||||||||||| ||||||||| ||||| ||| ||||| |||| ||| ||||| Sbjct: 968 acattcatgtactggcaggtgttgaagcagatgtaccatgctcctgtaaccgctagctac 1027 Query: 1794 cac 1796 ||| Sbjct: 1028 cac 1030
>dbj|AK099181.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099O12, full insert sequence Length = 1503 Score = 61.9 bits (31), Expect = 9e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 1734 acattcatgtactggcagttgttgaagctaatgtatcattctcctttaactgctggctac 1793 |||||||||||||||||| ||||||||| ||||| ||| ||||| |||| ||| ||||| Sbjct: 970 acattcatgtactggcaggtgttgaagcagatgtaccatgctcctgtaaccgctagctac 1029 Query: 1794 cac 1796 ||| Sbjct: 1030 cac 1032
>dbj|AK061980.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A08, full insert sequence Length = 1482 Score = 61.9 bits (31), Expect = 9e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 1734 acattcatgtactggcagttgttgaagctaatgtatcattctcctttaactgctggctac 1793 |||||||||||||||||| ||||||||| ||||| ||| ||||| |||| ||| ||||| Sbjct: 990 acattcatgtactggcaggtgttgaagcagatgtaccatgctcctgtaaccgctagctac 1049 Query: 1794 cac 1796 ||| Sbjct: 1050 cac 1052
>gb|BT014312.1| Lycopersicon esculentum clone 133563F, mRNA sequence Length = 1321 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 1731 caaacattcatgtactggcagttgttgaagctaatgtatcattctcctttaactgctggc 1790 |||||||||||||| |||||| | |||||||| ||||||||| ||||| |||||||| Sbjct: 887 caaacattcatgtattggcagatattgaagcttatgtatcatgctcctgctactgctggt 946 Query: 1791 tacca 1795 ||||| Sbjct: 947 tacca 951 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1886 gagatggtggttcaggtagga 1906 ||||||||||||||||||||| Sbjct: 1039 gagatggtggttcaggtagga 1059
>gb|AY104585.1| Zea mays PCO074899 mRNA sequence Length = 1509 Score = 56.0 bits (28), Expect = 6e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1734 acattcatgtactggcagttgttgaagctaatgtatcattctcc 1777 |||||||||||||||||| |||||||||| ||||| ||| |||| Sbjct: 991 acattcatgtactggcaggtgttgaagctgatgtaccatgctcc 1034
>emb|AL451076.14| Mouse DNA sequence from clone RP23-43O20 on chromosome X, complete sequence Length = 203581 Score = 52.0 bits (26), Expect = 0.009 Identities = 26/26 (100%) Strand = Plus / Plus Query: 7 aggagaaggagacagcaggaggcagg 32 |||||||||||||||||||||||||| Sbjct: 42462 aggagaaggagacagcaggaggcagg 42487 Score = 52.0 bits (26), Expect = 0.009 Identities = 26/26 (100%) Strand = Plus / Plus Query: 7 aggagaaggagacagcaggaggcagg 32 |||||||||||||||||||||||||| Sbjct: 42609 aggagaaggagacagcaggaggcagg 42634
>ref|NM_001052528.1| Oryza sativa (japonica cultivar-group) Os02g0164900 (Os02g0164900) mRNA, complete cds Length = 3884 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Minus Query: 59 tgctgctgctgctgccgcctttgc 82 |||||||||||||||||||||||| Sbjct: 94 tgctgctgctgctgccgcctttgc 71
>ref|XM_360541.1| Magnaporthe grisea 70-15 hypothetical protein (MG10853.4) partial mRNA Length = 2058 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Minus Query: 59 tgctgctgctgctgccgcctttgc 82 |||||||||||||||||||||||| Sbjct: 289 tgctgctgctgctgccgcctttgc 266
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Minus Query: 59 tgctgctgctgctgccgcctttgc 82 |||||||||||||||||||||||| Sbjct: 3486904 tgctgctgctgctgccgcctttgc 3486881
>dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0023I17 Length = 141852 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Minus Query: 59 tgctgctgctgctgccgcctttgc 82 |||||||||||||||||||||||| Sbjct: 31699 tgctgctgctgctgccgcctttgc 31676
>dbj|AP004093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1661_C12 Length = 122214 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Minus Query: 59 tgctgctgctgctgccgcctttgc 82 |||||||||||||||||||||||| Sbjct: 99727 tgctgctgctgctgccgcctttgc 99704
>dbj|AK070569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056C15, full insert sequence Length = 3885 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Minus Query: 59 tgctgctgctgctgccgcctttgc 82 |||||||||||||||||||||||| Sbjct: 95 tgctgctgctgctgccgcctttgc 72
>ref|NM_111109.2| Arabidopsis thaliana unknown protein (AT3G02420) mRNA, complete cds Length = 1403 Score = 46.1 bits (23), Expect = 0.54 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1737 ttcatgtactggcagttgttgaagctaatgtatca 1771 ||||||||||||||| | |||||||| |||||||| Sbjct: 942 ttcatgtactggcagctattgaagctgatgtatca 976
>gb|AC154650.2| Mus musculus BAC clone RP23-162K2 from chromosome 17, complete sequence Length = 210417 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Minus Query: 11 gaaggagacagcaggaggcaggg 33 ||||||||||||||||||||||| Sbjct: 131648 gaaggagacagcaggaggcaggg 131626
>gb|AC101910.20| Mus musculus chromosome 7, clone RP24-327I20, complete sequence Length = 197719 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1068 tcaaactatccattttatacttt 1090 ||||||||||||||||||||||| Sbjct: 159294 tcaaactatccattttatacttt 159272
>gb|AY056084.1| Arabidopsis thaliana AT3g02420/F16B3_5 mRNA, complete cds Length = 1047 Score = 46.1 bits (23), Expect = 0.54 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1737 ttcatgtactggcagttgttgaagctaatgtatca 1771 ||||||||||||||| | |||||||| |||||||| Sbjct: 880 ttcatgtactggcagctattgaagctgatgtatca 914
>gb|AY085605.1| Arabidopsis thaliana clone 160403 mRNA, complete sequence Length = 1259 Score = 46.1 bits (23), Expect = 0.54 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1737 ttcatgtactggcagttgttgaagctaatgtatca 1771 ||||||||||||||| | |||||||| |||||||| Sbjct: 927 ttcatgtactggcagctattgaagctgatgtatca 961
>gb|AF380625.1|AF380625 Arabidopsis thaliana AT3g02420/F16B3_5 mRNA, complete cds Length = 1403 Score = 46.1 bits (23), Expect = 0.54 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1737 ttcatgtactggcagttgttgaagctaatgtatca 1771 ||||||||||||||| | |||||||| |||||||| Sbjct: 942 ttcatgtactggcagctattgaagctgatgtatca 976
>emb|AJ564103.1|HSA564103 Homo sapiens KRT2B gene for keratin 2p, exons 1-9 Length = 15792 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Minus Query: 59 tgctgctgctgctgccgcctttg 81 ||||||||||||||||||||||| Sbjct: 14823 tgctgctgctgctgccgcctttg 14801
>gb|AC139763.4| Homo sapiens 12 BAC CTD-2325H11 (Cal Tech Human BAC Library D) complete sequence Length = 14039 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Plus Query: 59 tgctgctgctgctgccgcctttg 81 ||||||||||||||||||||||| Sbjct: 1392 tgctgctgctgctgccgcctttg 1414
>gb|AC068988.20| Homo sapiens 12 BAC RP11-672I14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 12440 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Plus Query: 59 tgctgctgctgctgccgcctttg 81 ||||||||||||||||||||||| Sbjct: 11828 tgctgctgctgctgccgcctttg 11850
>emb|BX822844.1|CNS0A76U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB68ZC10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1348 Score = 46.1 bits (23), Expect = 0.54 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1737 ttcatgtactggcagttgttgaagctaatgtatca 1771 ||||||||||||||| | |||||||| |||||||| Sbjct: 921 ttcatgtactggcagctattgaagctgatgtatca 955
>emb|BX824129.1|CNS0A6XS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH24ZG05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1359 Score = 46.1 bits (23), Expect = 0.54 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1737 ttcatgtactggcagttgttgaagctaatgtatca 1771 ||||||||||||||| | |||||||| |||||||| Sbjct: 924 ttcatgtactggcagctattgaagctgatgtatca 958
>emb|BX822228.1|CNS0A4UO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZA09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1351 Score = 46.1 bits (23), Expect = 0.54 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1737 ttcatgtactggcagttgttgaagctaatgtatca 1771 ||||||||||||||| | |||||||| |||||||| Sbjct: 923 ttcatgtactggcagctattgaagctgatgtatca 957
>gb|AC136516.3| Mus musculus BAC clone RP23-223E24 from 7, complete sequence Length = 179611 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1068 tcaaactatccattttatacttt 1090 ||||||||||||||||||||||| Sbjct: 3926 tcaaactatccattttatacttt 3904
>gb|AC153827.5| Mus musculus 6 BAC RP23-58O24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 234403 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Plus Query: 59 tgctgctgctgctgccgcctttg 81 ||||||||||||||||||||||| Sbjct: 106628 tgctgctgctgctgccgcctttg 106650
>gb|AC153875.3| Mus musculus 6 BAC RP23-218N14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187367 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Minus Query: 59 tgctgctgctgctgccgcctttg 81 ||||||||||||||||||||||| Sbjct: 9991 tgctgctgctgctgccgcctttg 9969
>gb|AC092480.27| Mus musculus strain C57BL/6J chromosome 17 clone rp23-387f2, complete sequence Length = 213144 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Minus Query: 11 gaaggagacagcaggaggcaggg 33 ||||||||||||||||||||||| Sbjct: 143525 gaaggagacagcaggaggcaggg 143503
>ref|NM_015848.1| Homo sapiens keratin 76 (KRT76), mRNA gb|M99063.1|HUMCYT2A Homo sapiens cytokeratin 2 mRNA, complete cds Length = 2513 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Minus Query: 59 tgctgctgctgctgccgcctttg 81 ||||||||||||||||||||||| Sbjct: 1664 tgctgctgctgctgccgcctttg 1642
>emb|AM180355.1| Clostridium difficile 630 complete genome Length = 4290252 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1083 tatactttatagtatcagtttc 1104 |||||||||||||||||||||| Sbjct: 1431843 tatactttatagtatcagtttc 1431864
>emb|CT010485.17| Mouse DNA sequence from clone CH29-161F5 on chromosome 17, complete sequence Length = 258652 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 cccgtgctgctgctgctgccgc 76 |||||||||||||||||||||| Sbjct: 203032 cccgtgctgctgctgctgccgc 203053
>ref|XM_990401.1| PREDICTED: Mus musculus hypothetical protein LOC671993 (LOC671993), mRNA Length = 1755 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 cccgtgctgctgctgctgccgc 76 |||||||||||||||||||||| Sbjct: 1150 cccgtgctgctgctgctgccgc 1171
>gb|AC153580.19| Mus musculus 6 BAC RP23-389F23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 180936 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 116 gctccctcgccctccctctctccccc 141 |||||||| ||||||||||||||||| Sbjct: 17572 gctccctctccctccctctctccccc 17597
>gb|AC127341.3| Mus musculus BAC clone RP23-189L19 from chromosome 17, complete sequence Length = 213609 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 cccgtgctgctgctgctgccgc 76 |||||||||||||||||||||| Sbjct: 132742 cccgtgctgctgctgctgccgc 132763
>gb|AC119828.9| Mus musculus chromosome 10, clone RP23-186A24, complete sequence Length = 205915 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 576 ctatatgtcaacatcaatcctt 597 |||||||||||||||||||||| Sbjct: 148704 ctatatgtcaacatcaatcctt 148683
>gb|AC159149.10| Mus musculus 10 BAC RP23-56F17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219585 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 58 gtgctgctgctgctgccgcctt 79 |||||||||||||||||||||| Sbjct: 161005 gtgctgctgctgctgccgcctt 161026
>gb|AF529953.1| HIV-1 isolate GT975 from Equatorial Guinea pol protein (pol) gene, partial cds Length = 936 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 487 gtcattacatttttctgttaatgctt 512 |||||||||| ||||||||||||||| Sbjct: 183 gtcattacatatttctgttaatgctt 158
>gb|AC127173.17| Mus musculus strain C57BL/6J clone rp23-39k4 map 10, complete sequence Length = 228883 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 117 ctccctcgccctccctctctcccccc 142 ||||||| |||||||||||||||||| Sbjct: 45820 ctccctctccctccctctctcccccc 45845
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete sequence Length = 164236 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 59 tgctgctgctgctgccgccttt 80 |||||||||||||||||||||| Sbjct: 66261 tgctgctgctgctgccgccttt 66282
>ref|XM_814633.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053506763.260) partial mRNA Length = 1497 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 61 ctgctgctgctgccgcctttgc 82 |||||||||||||||||||||| Sbjct: 229 ctgctgctgctgccgcctttgc 208
>gb|AC159995.4| Mus musculus chromosome 1, clone RP24-81G13, complete sequence Length = 204097 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 576 ctatatgtcaacatcaatcctt 597 |||||||||||||||||||||| Sbjct: 200700 ctatatgtcaacatcaatcctt 200721
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 59 tgctgctgctgctgccgccttt 80 |||||||||||||||||||||| Sbjct: 34698616 tgctgctgctgctgccgccttt 34698637
>gb|AC140419.8| Mus musculus BAC clone RP24-435P9 from chromosome 3, complete sequence Length = 157093 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 117 ctccctcgccctccctctctcccccc 142 ||||||| |||||||||||||||||| Sbjct: 88329 ctccctcaccctccctctctcccccc 88354
>gb|AC153372.5| Mus musculus 6 BAC RP23-358G19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 230623 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 116 gctccctcgccctccctctctccccc 141 |||||||| ||||||||||||||||| Sbjct: 31534 gctccctctccctccctctctccccc 31509
>gb|AC153548.4| Mus musculus 10 BAC RP23-356G7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194511 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 ctccctcgccctccctctctcccccc 142 ||||||| |||||||||||||||||| Sbjct: 97980 ctccctctccctccctctctcccccc 97955
>gb|AY145832.1| HIV-1 isolate tvsp22 pol protein (pol) gene, partial cds Length = 1269 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 487 gtcattacatttttctgttaatgctt 512 |||||||||| ||||||||||||||| Sbjct: 417 gtcattacatatttctgttaatgctt 392
>gb|AC102163.14| Mus musculus chromosome 1, clone RP23-431N20, complete sequence Length = 218665 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 576 ctatatgtcaacatcaatcctt 597 |||||||||||||||||||||| Sbjct: 122029 ctatatgtcaacatcaatcctt 122050
>gb|AY901445.1| HIV-1 isolate 827 protease (pol) gene, partial cds Length = 972 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 487 gtcattacatttttctgttaatgctt 512 |||||||||| ||||||||||||||| Sbjct: 120 gtcattacatatttctgttaatgctt 95
>gb|AC155938.6| Mus musculus 10 BAC RP24-421D7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 157047 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 58 gtgctgctgctgctgccgcctt 79 |||||||||||||||||||||| Sbjct: 100444 gtgctgctgctgctgccgcctt 100423
>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete sequence Length = 129302 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 tgctgctgctgctgccgccttt 80 |||||||||||||||||||||| Sbjct: 34789 tgctgctgctgctgccgccttt 34768
>gb|BC072635.1| Mus musculus glutamate receptor, metabotropic 4, mRNA (cDNA clone IMAGE:6850174) Length = 4425 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 55 cccgtgctgctgctgctgccgc 76 |||||||||||||||||||||| Sbjct: 197 cccgtgctgctgctgctgccgc 176
>emb|BX537330.9| Zebrafish DNA sequence from clone DKEYP-104A11 in linkage group 17, complete sequence Length = 99858 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 59 tgctgctgctgctgccgccttt 80 |||||||||||||||||||||| Sbjct: 69351 tgctgctgctgctgccgccttt 69372
>gb|AC133200.3| Mus musculus BAC clone RP23-292C19 from 3, complete sequence Length = 229751 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 117 ctccctcgccctccctctctcccccc 142 ||||||| |||||||||||||||||| Sbjct: 209145 ctccctcaccctccctctctcccccc 209170
>gb|AC124539.4| Mus musculus BAC clone RP23-359M14 from chromosome 12, complete sequence Length = 183684 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 ctccctcgccctccctctctcccccc 142 ||||||| |||||||||||||||||| Sbjct: 96440 ctccctctccctccctctctcccccc 96415
>ref|XM_001227554.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_09628) mRNA, complete cds Length = 7065 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 tgctgctgctgctgccgcctttgcg 83 ||||||||||||||||||| ||||| Sbjct: 5881 tgctgctgctgctgccgccgttgcg 5857
>gb|DQ889004.1| Paralichthys olivaceus microsatellite Poli1439TUF sequence Length = 248 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tgctgctgctgctgccgcctt 79 ||||||||||||||||||||| Sbjct: 159 tgctgctgctgctgccgcctt 139
>ref|XR_020234.1| PREDICTED: Pan troglodytes hypothetical protein LOC739059 (LOC739059), mRNA Length = 1287 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 tccccgtgctgctgctgctgccgcc 77 |||| |||||||||||||||||||| Sbjct: 275 tcccggtgctgctgctgctgccgcc 251
>gb|BT026246.1| Bos taurus opioid binding protein/cell adhesion molecule-like (OPCML), mRNA, complete cds Length = 1881 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tgctgctgctgctgccgcctt 79 ||||||||||||||||||||| Sbjct: 117 tgctgctgctgctgccgcctt 97
>ref|NW_001509355.1| Eimeria tenella str. Houghton chromosome 1 emb|AM269894.1| Eimeria tenella chromosome 1, ordered contigs Length = 1347714 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 tgctgctgctgctgccgcctt 79 ||||||||||||||||||||| Sbjct: 1098121 tgctgctgctgctgccgcctt 1098141
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1271 tattgttgcgctgatcggcatcatt 1295 ||||| ||||||||||||||||||| Sbjct: 798939 tattggtgcgctgatcggcatcatt 798915
>gb|AC124958.13| Medicago truncatula clone mth2-18i11, complete sequence Length = 120562 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1177 ttaatgatgagcaatgggaga 1197 ||||||||||||||||||||| Sbjct: 20208 ttaatgatgagcaatgggaga 20228
>gb|AC158974.8| Mus musculus chromosome 15, clone RP24-252G18, complete sequence Length = 170539 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 gaaggagacagcaggaggcag 31 ||||||||||||||||||||| Sbjct: 77511 gaaggagacagcaggaggcag 77491
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 gtgctgctgctgctgccgcct 78 ||||||||||||||||||||| Sbjct: 816832 gtgctgctgctgctgccgcct 816852
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 tgctgctgctgctgccgcctt 79 ||||||||||||||||||||| Sbjct: 54033 tgctgctgctgctgccgcctt 54053
>gb|AC148934.2| Pan troglodytes BAC clone CH251-557M20 from Y, complete sequence Length = 169254 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 ctccctcgccctccctctctccccc 141 ||||||| ||||||||||||||||| Sbjct: 110189 ctccctctccctccctctctccccc 110213
>gb|AC132136.3| Mus musculus BAC clone RP23-204A23 from chromosome 14, complete sequence Length = 196133 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 ccctcgccctccctctctccc 139 ||||||||||||||||||||| Sbjct: 770 ccctcgccctccctctctccc 790
>gb|AC004888.1| Homo sapiens PAC clone RP4-797C5 from 7, complete sequence Length = 157466 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 489 cattacatttttctgttaatg 509 ||||||||||||||||||||| Sbjct: 8723 cattacatttttctgttaatg 8703
>gb|AC147151.2| Pan troglodytes BAC clone CH251-205A10 from Y, complete sequence Length = 174629 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 ctccctcgccctccctctctccccc 141 ||||||| ||||||||||||||||| Sbjct: 169893 ctccctctccctccctctctccccc 169917
>gb|AC132141.3| Mus musculus BAC clone RP23-55P19 from chromosome 15, complete sequence Length = 168586 Score = 42.1 bits (21), Expect = 8.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 118 tccctcgccctccctctctccccccgctt 146 |||| ||||||||||| |||||||||||| Sbjct: 111120 tcccccgccctccctccctccccccgctt 111092
>gb|AC108780.10| Mus musculus chromosome 14, clone RP23-445H16, complete sequence Length = 196236 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 ccctcgccctccctctctccc 139 ||||||||||||||||||||| Sbjct: 51725 ccctcgccctccctctctccc 51705
>gb|AC097257.7| Rattus norvegicus X BAC CH230-180I13 (Children's Hospital Oakland Research Institute) complete sequence Length = 196137 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 tacaactgctaatgataatgc 310 ||||||||||||||||||||| Sbjct: 38597 tacaactgctaatgataatgc 38577
>ref|XM_390260.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10084.1) partial mRNA Length = 12666 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tgctgctgctgctgccgcctt 79 ||||||||||||||||||||| Sbjct: 228 tgctgctgctgctgccgcctt 208
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1905 gatggatatggtgccggtagt 1925 ||||||||||||||||||||| Sbjct: 639695 gatggatatggtgccggtagt 639675
>gb|AY877228.1| HIV-1 isolate BR99SP73 from Brazil reverse transcriptase (pol) gene, partial cds Length = 692 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 tcattacatttttctgttaatgctt 512 ||||||||| ||||||||||||||| Sbjct: 86 tcattacatatttctgttaatgctt 62
>gb|AC123567.8| Homo sapiens 12 BAC RP11-74K11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114800 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 gccagctcttctcagtcccct 269 ||||||||||||||||||||| Sbjct: 65077 gccagctcttctcagtcccct 65057
>gb|AC145875.3| Pan troglodytes BAC clone RP43-6O8 from chromosome 7, complete sequence Length = 179919 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 ggagacagcaggaggcagggggtca 38 ||||| ||||||||||||||||||| Sbjct: 42867 ggagaaagcaggaggcagggggtca 42843
>gb|AC068654.2| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0015O22 From Chromosome 10, complete sequence Length = 189349 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1905 gatggatatggtgccggtagt 1925 ||||||||||||||||||||| Sbjct: 107303 gatggatatggtgccggtagt 107283
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1905 gatggatatggtgccggtagt 1925 ||||||||||||||||||||| Sbjct: 639695 gatggatatggtgccggtagt 639675
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tgctgctgctgctgccgcctt 79 ||||||||||||||||||||| Sbjct: 26749719 tgctgctgctgctgccgcctt 26749699
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 tgctgctgctgctgccgcctt 79 ||||||||||||||||||||| Sbjct: 27973868 tgctgctgctgctgccgcctt 27973888
>dbj|BS000581.1| Pan troglodytes chromosome Y clone:PTB-115D04, complete sequence Length = 190533 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 ctccctcgccctccctctctccccc 141 ||||||| ||||||||||||||||| Sbjct: 1406 ctccctctccctccctctctccccc 1382
>emb|AL139234.19| Human DNA sequence from clone RP3-438D16 on chromosome Xq24-26.1 Contains the PDCD8 gene for programmed cell death 8 (apoptosis-inducing factor) (AIF), the RAB33A gene for RAB33A, member RAS oncogene family (S10, RabS10), the 3' end of a novel gene (FLJ20095) and two CpG islands, complete sequence Length = 90007 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 ctcagccagctcttctcagtc 265 ||||||||||||||||||||| Sbjct: 52892 ctcagccagctcttctcagtc 52912
>emb|AL096773.6|HS1000E10 Human DNA sequence from clone RP5-1000E10 on chromosome 1p12-13.3 Contains the 5' end of the gene for a novel protein (FLJ37099), the AMPD1 gene for adenosine monophosphate deaminase 1 (isoform M), the NRAS gene for neuroblastoma RAS viral (v-ras) oncogene homolog, the gene for NRAS-related gene (D1S155E) and the gene for a novel protein (FLJ44339), complete sequence Length = 140207 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 924 agtgttctaagttattgtttc 944 ||||||||||||||||||||| Sbjct: 104577 agtgttctaagttattgtttc 104557
>emb|CR354378.21| Zebrafish DNA sequence from clone CH211-131D10 in linkage group 7, complete sequence Length = 162741 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1931 aaaggaatataaatgtttttg 1951 ||||||||||||||||||||| Sbjct: 129653 aaaggaatataaatgtttttg 129673
>gb|AC154706.2| Mus musculus BAC clone RP23-132D23 from chromosome 14, complete sequence Length = 215330 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 ctccctcgccctccctctctccccc 141 ||||||| ||||||||||||||||| Sbjct: 137947 ctccctctccctccctctctccccc 137971
>gb|AC136213.2| Leishmania major strain Friedlin chromosome 27 clone LB02059, complete sequence Length = 102826 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 gtgctgctgctgctgccgcct 78 ||||||||||||||||||||| Sbjct: 71655 gtgctgctgctgctgccgcct 71675
>emb|BX883042.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 1/11 Length = 348780 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 50 ctgtccccgtgctgctgctgctgcc 74 |||||||| |||||||||||||||| Sbjct: 254730 ctgtccccttgctgctgctgctgcc 254754
>ref|NM_204560.1| Gallus gallus activin A receptor, type I (ACVR1), mRNA emb|AJ318064.2|GGA318064 Gallus gallus mRNA for activin receptor type I precursor (ACVR1 gene) Length = 2792 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 tccccgtgctgctgctgctgc 73 ||||||||||||||||||||| Sbjct: 154 tccccgtgctgctgctgctgc 174
>gb|AC007390.4| Homo sapiens BAC clone RP11-423P10 from 2, complete sequence Length = 131011 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1161 ttttagcttgcatgtattaat 1181 ||||||||||||||||||||| Sbjct: 8426 ttttagcttgcatgtattaat 8446
>gb|AF330231.1|AF330231 Chlamydomonas reinhardtii putative serine/threonine kinase (ACV4) gene, partial cds; and RNA stability factor MCA1 (MCA1) gene, complete cds Length = 12073 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 gctgctgctgccgcctttgcgtcgg 87 ||||||||||||||| ||||||||| Sbjct: 5273 gctgctgctgccgccgttgcgtcgg 5297
>gb|AC073485.3| Homo sapiens BAC clone RP11-798J16 from 2, complete sequence Length = 140811 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 ccctccctctctccccccgct 145 ||||||||||||||||||||| Sbjct: 129871 ccctccctctctccccccgct 129851
>emb|CR762445.5| Zebrafish DNA sequence from clone DKEY-11C9 in linkage group 5, complete sequence Length = 119683 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1080 ttttatactttatagtatcagtttc 1104 |||||||||||||||||||| |||| Sbjct: 4550 ttttatactttatagtatcaatttc 4526
>gb|AC108036.2| Homo sapiens BAC clone RP11-164E7 from 2, complete sequence Length = 151319 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1930 taaaggaatataaatgttttt 1950 ||||||||||||||||||||| Sbjct: 29226 taaaggaatataaatgttttt 29206
>gb|AC011749.2|AC011749 Homo sapiens BAC clone RP11-455E3 from Y, complete sequence Length = 205053 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 ctccctcgccctccctctctccccc 141 ||||||| ||||||||||||||||| Sbjct: 54522 ctccctctccctccctctctccccc 54546
>dbj|BS000616.1| Pan troglodytes chromosome Y clone:PTB-085B05, complete sequences Length = 74459 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 ctccctcgccctccctctctccccc 141 ||||||| ||||||||||||||||| Sbjct: 42830 ctccctctccctccctctctccccc 42806
>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0033D24 Length = 186132 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tgctgctgctgctgccgcctt 79 ||||||||||||||||||||| Sbjct: 93061 tgctgctgctgctgccgcctt 93041
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tgctgctgctgctgccgcctt 79 ||||||||||||||||||||| Sbjct: 12509 tgctgctgctgctgccgcctt 12489
>ref|XM_957545.1| Neurospora crassa OR74A hypothetical protein (NCU06998.1) partial mRNA Length = 873 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 cgtgctgctgctgctgccgcc 77 ||||||||||||||||||||| Sbjct: 270 cgtgctgctgctgctgccgcc 250
>gb|AC144474.22| Medicago truncatula clone mth2-15l5, complete sequence Length = 142202 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1177 ttaatgatgagcaatgggaga 1197 ||||||||||||||||||||| Sbjct: 100355 ttaatgatgagcaatgggaga 100335
>emb|BX255951.13| Zebrafish DNA sequence from clone DKEYP-31E5 in linkage group 5, complete sequence Length = 171425 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1080 ttttatactttatagtatcagtttc 1104 |||||||||||||||||||| |||| Sbjct: 5542 ttttatactttatagtatcaatttc 5518
>dbj|AK109996.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-E12, full insert sequence Length = 3110 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tgctgctgctgctgccgcctt 79 ||||||||||||||||||||| Sbjct: 1554 tgctgctgctgctgccgcctt 1534
>gb|AF204046.1|AF204046 HIV-1 from Romania clone 97R105 pol polyprotein (pol) gene, partial cds Length = 1152 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 tcattacatttttctgttaatgctt 512 ||||||||| ||||||||||||||| Sbjct: 404 tcattacatatttctgttaatgctt 380
>ref|XM_843053.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0451) partial mRNA Length = 3534 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 gtgctgctgctgctgccgcct 78 ||||||||||||||||||||| Sbjct: 2252 gtgctgctgctgctgccgcct 2232
>gb|U38622.1|GGU38622 Gallus gallus type I TGF B receptor mRNA, complete cds Length = 1758 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 tccccgtgctgctgctgctgc 73 ||||||||||||||||||||| Sbjct: 116 tccccgtgctgctgctgctgc 136
>gb|AY450929.1| Chlamydomonas reinhardtii minus agglutinin (SAD1) gene, complete cds Length = 19311 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 tgctgctgctgctgccgcctttgcg 83 |||||||||||||||||||| |||| Sbjct: 9480 tgctgctgctgctgccgcctgtgcg 9456
>gb|AC140461.4| Mus musculus BAC clone RP23-11M24 from 1, complete sequence Length = 202209 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tgctgctgctgctgccgcctt 79 ||||||||||||||||||||| Sbjct: 111863 tgctgctgctgctgccgcctt 111843
>gb|AY365759.1| HIV-1 isolate 107003 from Argentina pol protein (pol) gene, partial cds Length = 1497 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 tcattacatttttctgttaatgctt 512 ||||||||| ||||||||||||||| Sbjct: 416 tcattacatatttctgttaatgctt 392
>emb|AL807745.7| Mouse DNA sequence from clone RP23-20E10 on chromosome 4, complete sequence Length = 218691 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 319 atgatccaggtgataacaagcatat 343 ||||||||||||||||||| ||||| Sbjct: 145604 atgatccaggtgataacaaacatat 145628
>emb|AL772315.4| Mouse DNA sequence from clone RP23-54A13 on chromosome 4, complete sequence Length = 200266 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1978 atatctttttctttgcaaggt 1998 ||||||||||||||||||||| Sbjct: 8626 atatctttttctttgcaaggt 8646
>emb|AL807376.4| Mouse DNA sequence from clone RP23-436K3 on chromosome X, complete sequence Length = 203189 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 tccccgtgctgctgctgctgc 73 ||||||||||||||||||||| Sbjct: 3206 tccccgtgctgctgctgctgc 3226 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 tccccgtgctgctgctgctgc 73 ||||||||||||||||||||| Sbjct: 50028 tccccgtgctgctgctgctgc 50008
>emb|AL929142.6| Mouse DNA sequence from clone RP23-340A13 on chromosome 2, complete sequence Length = 207823 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 gggaggagaaggagacagcag 24 ||||||||||||||||||||| Sbjct: 15119 gggaggagaaggagacagcag 15099
>gb|AC166328.4| Mus musculus BAC clone RP23-31H5 from chromosome 5, complete sequence Length = 215189 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 ctccctcgccctccctctctccccc 141 ||||||| ||||||||||||||||| Sbjct: 110398 ctccctccccctccctctctccccc 110374 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 412,039,358 Number of extensions: 23025085 Number of successful extensions: 291082 Number of sequences better than 10.0: 119 Number of HSP's gapped: 291082 Number of HSP's successfully gapped: 152 Length of query: 2209 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2186 Effective length of database: 18,503,978,556 Effective search space: 40449697123416 Effective search space used: 40449697123416 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
