ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf64d09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK060603:Os03g0343700 488 e-138
2AK102274:Os03g0343700 269 3e-72
3Os08g0168700:Os08g0168700 30 3.5
4AK105229:Os10g0473200 29 6.0
5AK063553:Os10g0457400 29 6.1

>AK060603:Os03g0343700 |
          Length = 360
 Score =  488 bits (1257), Expect = e-138
 Identities = 244/298 (81%), Positives = 262/298 (87%)
 Frame = +1

Query: 136  WKMPLSVARKQQAVLANVDQVTGERIPKSFVFSRGKLPSTLRHLQQDLRKLMLPYTAXXX 315
            WKMP SVARKQQA +ANVDQVTG++IPKSFVFSRGKLPSTLRHLQQDLRK+MLPYTA   
Sbjct: 27   WKMPASVARKQQAAMANVDQVTGDKIPKSFVFSRGKLPSTLRHLQQDLRKVMLPYTALNL 86

Query: 316  XXXXXXXXXDFVNVASPLGVTHFLILSNPKSLPHLRFAKSPQGPTYTCQILEYALAADIA 495
                     DFVNV+ PLGVTHF IL+NPKS PHLR AK+PQGPTYT QI EYALAADIA
Sbjct: 87   KEKKRNNLKDFVNVSGPLGVTHFFILTNPKSSPHLRMAKTPQGPTYTFQIKEYALAADIA 146

Query: 496  NSQKRPRCPAEIFKNSPLVVLSGFNGLGEPFKSFVTFFRHLVPAIDTDTVKLSTCQRILL 675
            NSQKRPRCP EIFKNSPL VLSGF GLGEPFKS V +FRH+ PAID  TVKLSTCQRILL
Sbjct: 147  NSQKRPRCPPEIFKNSPLTVLSGFGGLGEPFKSLVEYFRHMTPAIDPVTVKLSTCQRILL 206

Query: 676  LQCDKETEVIDFRHYSIKLQPVGVSRKIRKLMQNNQVPDLRDLKDVSDYVTKAGYGSESE 855
            +  D+E E+I+FRHYSIKLQPVGV+RKIRKLMQNNQVPDLRDL DVSDYVTKAGYGSESE
Sbjct: 207  IHFDREKEMINFRHYSIKLQPVGVTRKIRKLMQNNQVPDLRDLNDVSDYVTKAGYGSESE 266

Query: 856  PDDEAATVSLASDIDKLNRASRKSAVRLQEIGPRMTMRLVKVESGLCSGDVLYPQSVG 1029
             DDEAATVSLASD+DKLNRASRKSA+RLQEIGPRM + LVKVE+GLCSGDVLYPQ VG
Sbjct: 267  VDDEAATVSLASDVDKLNRASRKSAIRLQEIGPRMKLHLVKVEAGLCSGDVLYPQPVG 324



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>AK102274:Os03g0343700 |
          Length = 200

 Score =  269 bits (688), Expect = 3e-72
 Identities = 134/159 (84%), Positives = 145/159 (91%)
 Frame = +1

Query: 553  VLSGFNGLGEPFKSFVTFFRHLVPAIDTDTVKLSTCQRILLLQCDKETEVIDFRHYSIKL 732
            VLSGF GLGEPFKS V +FRH+ PAID  TVKLSTCQRILL+  D+E E+I+FRHYSIKL
Sbjct: 6    VLSGFGGLGEPFKSLVEYFRHMTPAIDPVTVKLSTCQRILLIHFDREKEMINFRHYSIKL 65

Query: 733  QPVGVSRKIRKLMQNNQVPDLRDLKDVSDYVTKAGYGSESEPDDEAATVSLASDIDKLNR 912
            QPVGV+RKIRKLMQNNQVPDLRDL DVSDYVTKAGYGSESE DDEAATVSLASD+DKLNR
Sbjct: 66   QPVGVTRKIRKLMQNNQVPDLRDLNDVSDYVTKAGYGSESEVDDEAATVSLASDVDKLNR 125

Query: 913  ASRKSAVRLQEIGPRMTMRLVKVESGLCSGDVLYPQSVG 1029
            ASRKSA+RLQEIGPRM + LVKVE+GLCSGDVLYPQ VG
Sbjct: 126  ASRKSAIRLQEIGPRMKLHLVKVEAGLCSGDVLYPQPVG 164



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>Os08g0168700:Os08g0168700 |
          Length = 694

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 20/75 (26%), Positives = 32/75 (42%)
 Frame = +3

Query: 360 QPIGCYAFPDPLEPKELTAPALRQVTAGSNLHLSDFRVRSCS*HRKLPKAAKVSCRDIQK 539
           +P+     P PL P+ L  P      + S ++LS  R  + +       A   +C +   
Sbjct: 259 RPLSARPLPSPLPPRSLPLPT----PSISAVYLSRSRGFTAA-------APVAACLNSMA 307

Query: 540 LASGRAKWFQWPRRA 584
             SG  +W +WPR A
Sbjct: 308 STSGMRRWRRWPRHA 322



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>AK105229:Os10g0473200 |
          Length = 114

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +3

Query: 426 RQVTAGSNLHLSDFRVRSCS*HRKLPKAAKVSCRDIQKLASGRAKWFQWPRRAFQE 593
           R +TAG  L     R R C+  R+  +A+  + RD+   A G  +  Q  R A  E
Sbjct: 55  RAMTAGGELDGGGKRGRRCARRRRRQEASSAAARDVSSAAVGGERGSQGGRGADDE 110



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>AK063553:Os10g0457400 |
          Length = 351

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +1

Query: 814 SDYVTKAGYGSESEPDDEAAT-VSLASDIDKLNRASRKSAVRLQEIGPRMTMRL 972
           SD   +   G    P+  AA+  S A+   KL+ ASRK   R + +GP  T +L
Sbjct: 197 SDRAAQIKDGDVVNPEPAAASDASHAASTKKLSNASRKRMQRSRSLGPAATTKL 250


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 26,620,526
Number of extensions: 496679
Number of successful extensions: 1384
Number of sequences better than 10.0: 5
Number of HSP's gapped: 1384
Number of HSP's successfully gapped: 5
Length of query: 414
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 311
Effective length of database: 11,275,632
Effective search space: 3506721552
Effective search space used: 3506721552
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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