ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf64d09 |
|---|---|
| Clone Library Name | barley_pub |
>Q9ASU7:PPAN_ARATH Peter Pan-like protein - Arabidopsis thaliana (Mouse-ear cress)| Length = 345 Score = 343 bits (881), Expect = 7e-94 Identities = 172/289 (59%), Positives = 225/289 (77%) Frame = +1 Query: 154 VARKQQAVLANVDQVTGERIPKSFVFSRGKLPSTLRHLQQDLRKLMLPYTAXXXXXXXXX 333 +A+K Q +V VTG++IPKSFVFSR KL ++ LQ DLRKLMLPYTA Sbjct: 17 IAKKNQE---DVSHVTGDKIPKSFVFSRMKLAGPVKQLQMDLRKLMLPYTALSLKEKKRN 73 Query: 334 XXXDFVNVASPLGVTHFLILSNPKSLPHLRFAKSPQGPTYTCQILEYALAADIANSQKRP 513 DF+NV+ P+GVTHFL+LS S LR A++PQGPT T +I +Y+LA+DIA SQ RP Sbjct: 74 TLRDFLNVSGPMGVTHFLMLSKTASSLSLRVARTPQGPTLTFKIHQYSLASDIAQSQLRP 133 Query: 514 RCPAEIFKNSPLVVLSGFNGLGEPFKSFVTFFRHLVPAIDTDTVKLSTCQRILLLQCDKE 693 RCP ++FK+ PL+VLSGF K F+++ PAID +TVKLSTCQR++LL +K+ Sbjct: 134 RCPQDLFKSPPLIVLSGFGSQELHLKLATIMFQNIFPAIDINTVKLSTCQRLVLLNYNKD 193 Query: 694 TEVIDFRHYSIKLQPVGVSRKIRKLMQNNQVPDLRDLKDVSDYVTKAGYGSESEPDDEAA 873 T++IDFRHYSI+LQPVGVSR+IRK +QN+QVPDLR+L+DVSD+VTKAGYGSESE D+EAA Sbjct: 194 TKLIDFRHYSIRLQPVGVSRRIRKFVQNHQVPDLRNLQDVSDFVTKAGYGSESEGDEEAA 253 Query: 874 TVSLASDIDKLNRASRKSAVRLQEIGPRMTMRLVKVESGLCSGDVLYPQ 1020 TV+L+SD+ ++N+ + KSAV+LQEIGPRMTM+LVKVE GLC+G +++ + Sbjct: 254 TVTLSSDLGRVNKGATKSAVKLQEIGPRMTMQLVKVEEGLCTGGIIFSE 302
>Q91YU8:SSF1_MOUSE Suppressor of SWI4 1 homolog - Mus musculus (Mouse)| Length = 470 Score = 201 bits (510), Expect = 7e-51 Identities = 115/288 (39%), Positives = 176/288 (61%), Gaps = 4/288 (1%) Frame = +1 Query: 163 KQQAVLANVDQVTGERIPKSFVFSRGKLPSTLRHLQQDLRKLMLPYTAXXXXXXXXXXXX 342 + QA L N++ + P SFVF+RG+ +R L D+R++M P TA Sbjct: 14 RAQAQLRNLESYAAQ--PHSFVFTRGRAGRNVRQLSLDVRRVMEPLTATRLQVRKKNSLK 71 Query: 343 DFVNVASPLGVTHFLILSNPKSLPHLRFAKSPQGPTYTCQILEYALAADIANSQKRPRCP 522 D V VA PLGVTHFLIL+ + +L+ + P GPT T QI +Y L D+ +S +R R Sbjct: 72 DCVAVAGPLGVTHFLILTKTDNSVYLKLMRLPGGPTLTFQISKYTLIRDVVSSLRRHRMH 131 Query: 523 AEIFKNSPLVVLSGFNGLGEPFKSFVTFFRHLVPAIDTDTVKLSTCQRILLLQCDKETEV 702 + F + PL+VL+ F G K T F++L P+I+ TV L+T +R LL+ + +++ Sbjct: 132 EQQFNHPPLLVLNSFGPQGMHIKLMATMFQNLFPSINVHTVNLNTIKRCLLINYNPDSQE 191 Query: 703 IDFRHYSIKLQPVGVSRKIRKLMQNNQVPDLRDLKDVSDYVTKAGYG---SESEPDDEAA 873 +DFRHYS+K+ PVG SR ++KL+Q + P++ L+D+S+ + G G SE EPD E Sbjct: 192 LDFRHYSVKVVPVGASRGMKKLLQ-EKFPNMSRLQDISELLA-TGVGLSDSEVEPDGEHN 249 Query: 874 TVSLASDI-DKLNRASRKSAVRLQEIGPRMTMRLVKVESGLCSGDVLY 1014 T L + + N +++SAVRL EIGPRMT++L+K++ G+ +G+VL+ Sbjct: 250 TTELPQAVAGRGNMQAQQSAVRLTEIGPRMTLQLIKIQEGVGNGNVLF 297
>Q9NQ55:SSF1_HUMAN Suppressor of SWI4 1 homolog - Homo sapiens (Human)| Length = 473 Score = 192 bits (489), Expect = 2e-48 Identities = 113/287 (39%), Positives = 173/287 (60%), Gaps = 3/287 (1%) Frame = +1 Query: 163 KQQAVLANVDQVTGERIPKSFVFSRGKLPSTLRHLQQDLRKLMLPYTAXXXXXXXXXXXX 342 + QA L N++ P SFVF+RG +R L D+R++M P TA Sbjct: 14 RAQAQLRNLEAYAAN--PHSFVFTRGCTGRNIRQLSLDVRRVMEPLTASRLQVRKKNSLK 71 Query: 343 DFVNVASPLGVTHFLILSNPKSLPHLRFAKSPQGPTYTCQILEYALAADIANSQKRPRCP 522 D V VA PLGVTHFLILS ++ + + + P GPT T Q+ +Y+L D+ +S +R R Sbjct: 72 DCVAVAGPLGVTHFLILSKTETNVYFKLMRLPGGPTLTFQVKKYSLVRDVVSSLRRHRMH 131 Query: 523 AEIFKNSPLVVLSGFNGLGEPFKSFVTFFRHLVPAIDTDTVKLSTCQRILLLQCDKETEV 702 + F + PL+VL+ F G K T F++L P+I+ V L+T +R LL+ + +++ Sbjct: 132 EQQFAHPPLLVLNSFGPHGMHVKLMATMFQNLFPSINVHKVNLNTIKRCLLIDYNPDSQE 191 Query: 703 IDFRHYSIKLQPVGVSRKIRKLMQNNQVPDLRDLKDVSDYV-TKAGYG-SESEPDDEAAT 876 +DFRHYSIK+ PVG SR ++KL+Q + P++ L+D+S+ + T AG SE+EPD + Sbjct: 192 LDFRHYSIKVVPVGASRGMKKLLQ-EKFPNMSRLQDISELLATGAGLSESEAEPDGDHNI 250 Query: 877 VSLASDI-DKLNRASRKSAVRLQEIGPRMTMRLVKVESGLCSGDVLY 1014 L + + N +++SAVRL EIGPRMT++L+KV+ G+ G V++ Sbjct: 251 TELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMF 297
>Q5REM3:SSF1_PONPY Suppressor of SWI4 1 homolog - Pongo pygmaeus (Orangutan)| Length = 473 Score = 190 bits (482), Expect = 1e-47 Identities = 113/287 (39%), Positives = 171/287 (59%), Gaps = 3/287 (1%) Frame = +1 Query: 163 KQQAVLANVDQVTGERIPKSFVFSRGKLPSTLRHLQQDLRKLMLPYTAXXXXXXXXXXXX 342 + QA L N++ P SFVF+RG +R L D+R++M P TA Sbjct: 14 RAQAQLRNLEAYAAN--PHSFVFTRGCTGRNIRQLSLDVRRVMEPLTASRLQVRKKNSLK 71 Query: 343 DFVNVASPLGVTHFLILSNPKSLPHLRFAKSPQGPTYTCQILEYALAADIANSQKRPRCP 522 D V VA PLGVTHFLILS ++ + + P GPT T Q+ +Y+L D+ +S +R R Sbjct: 72 DCVAVAGPLGVTHFLILSKTETNIYFKLMHLPGGPTLTFQVKKYSLVRDVVSSLRRHRMH 131 Query: 523 AEIFKNSPLVVLSGFNGLGEPFKSFVTFFRHLVPAIDTDTVKLSTCQRILLLQCDKETEV 702 + F PL+VL+ F G K T F++L P+I+ V L+T +R LL+ + +++ Sbjct: 132 EQQFAYPPLLVLNSFGPHGMHVKLMATMFQNLFPSINVHKVNLNTIKRCLLIDYNHDSQE 191 Query: 703 IDFRHYSIKLQPVGVSRKIRKLMQNNQVPDLRDLKDVSDYV-TKAGYG-SESEPDDEAAT 876 +DFRHYSIK+ PVG SR ++KL+Q + P++ L+D+S+ + T AG SE+EPD + Sbjct: 192 LDFRHYSIKVVPVGASRGMKKLLQ-EKFPNMSRLQDISELLATGAGLSESEAEPDGDHNI 250 Query: 877 VSLASDI-DKLNRASRKSAVRLQEIGPRMTMRLVKVESGLCSGDVLY 1014 L + + N +++SAVRL EIGPRMT++L+KV+ G+ G V++ Sbjct: 251 TELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMF 297
>Q9VDE5:PPAN_DROME Protein Peter pan - Drosophila melanogaster (Fruit fly)| Length = 460 Score = 183 bits (464), Expect = 1e-45 Identities = 98/273 (35%), Positives = 165/273 (60%), Gaps = 2/273 (0%) Frame = +1 Query: 214 PKSFVFSRGKLPSTLRHLQQDLRKLMLPYTAXXXXXXXXXXXXDFVNVASPLGVTHFLIL 393 P SFV RG + L D R++M P+TA DFV+++S V+H I Sbjct: 28 PHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLREKRMNRIKDFVSLSSFFHVSHMGIF 87 Query: 394 SNPKSLPHLRFAKSPQGPTYTCQILEYALAADIANSQKRPRCPAEIFKNSPLVVLSGFNG 573 + + + + P+GP+ T ++ ++ LA D+ + K+ + FK++PLV+++ F+G Sbjct: 88 NKASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPLVIMNNFSG 147 Query: 574 LGEPFKSFVTFFRHLVPAIDTDTVKLSTCQRILLLQCDKETEVIDFRHYSIKLQPVGVSR 753 G+ K T F+++ P+I+ TV + T +R +L + +T++++ RHYS+++ PVG+ R Sbjct: 148 DGKHLKLMATTFQNMFPSINLATVNIGTIRRCVLFSYNPDTKLVEMRHYSVQVVPVGLKR 207 Query: 754 KIRKLMQNNQVPDLRDLKDVSDYVTKAGYGSESE-PDDEAATVSLASDI-DKLNRASRKS 927 ++K+++ VP+L +V D+VTK GY SESE DDE + V LA + K N +KS Sbjct: 208 AVQKIVKGT-VPNLGKCNEVVDFVTKDGYASESEAEDDEQSHVVLAQTLKSKGNLEDKKS 266 Query: 928 AVRLQEIGPRMTMRLVKVESGLCSGDVLYPQSV 1026 +++L EIGPR+TM+L+K+E GL +G+VLY V Sbjct: 267 SIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHV 299
>O14206:YDD3_SCHPO Brix domain-containing protein C1B9.03c - Schizosaccharomyces pombe| (Fission yeast) Length = 389 Score = 158 bits (399), Expect = 5e-38 Identities = 103/303 (33%), Positives = 166/303 (54%), Gaps = 24/303 (7%) Frame = +1 Query: 190 DQVTGERIPKSFVFSRG--KLPSTLRHLQQDLRKLMLPYTAXXXXXXXXXXXXDFVNVAS 363 D + IPKS V G ++ +L L +DLR +M P+TA D++ +A Sbjct: 18 DPIQEAAIPKSMVIRSGASEVGRSLSLLTRDLRHMMEPHTAIRLKERKANKIKDYLTMAG 77 Query: 364 PLGVTHFLILSNPKSLPHLRFAKSPQGPTYTCQILEYALAADIANSQKRPRCPAEIFKNS 543 PLGVTH L+LS + +LR ++P+GP+ +I EY L D+ QK P+ P F Sbjct: 78 PLGVTHLLVLSRTDNNANLRIIRAPRGPSLHFRIHEYMLNKDVRRLQKNPKSPTTEFLTP 137 Query: 544 PLVVLSGFN---GLGEPFKSFV-TFFRHLVPAIDTDTVKLSTCQRILLLQCDKETEVIDF 711 PL+V++ FN P ++ + T F+++ P I +++ +R+LLL ++ ID Sbjct: 138 PLLVMNHFNQNSSKDSPHEALLTTTFQNMFPPISVQHTNINSVKRVLLLN-RRDDGYIDL 196 Query: 712 RHYSIKLQPVGVSRKIRKLM----QNNQVPDLRDLKDVSDYVTK----AGYGSESEPDDE 867 RH+ I +PVG+SR IR L+ +++ +PDL +++D+SDYV +G S+SE +++ Sbjct: 197 RHFIISTKPVGISRPIRHLLKGEKKDSDIPDLHNVRDISDYVLHGDGISGAASDSEIEED 256 Query: 868 AATVSLASDI-----DKLNRAS-----RKSAVRLQEIGPRMTMRLVKVESGLCSGDVLYP 1017 ATV + + + L AS ++ A++L EIGPRMT+ L+K+ G VLY Sbjct: 257 -ATVEIDRPVPTKTEENLLSASQLLKPKQQAIKLIEIGPRMTLELIKITEDAMGGKVLYH 315 Query: 1018 QSV 1026 V Sbjct: 316 SHV 318
>P38789:SSF1_YEAST Ribosome biogenesis protein SSF1 - Saccharomyces cerevisiae (Baker's| yeast) Length = 453 Score = 142 bits (358), Expect = 3e-33 Identities = 105/353 (29%), Positives = 171/353 (48%), Gaps = 64/353 (18%) Frame = +1 Query: 160 RKQQAVLANVDQVTGERIPKSFVFSRGKLP---STLRHLQQDLRKLMLPYTAXXXXXXXX 330 R+++ A + + IPKS V G+ +L L +D R++M P+TA Sbjct: 5 RQKKRTHAQLTPEQEQGIPKSMVIRVGQTSLANHSLNQLVKDFRQIMQPHTAIKLKERKS 64 Query: 331 XXXXDFVNVASPLGVTHFLILSNPKSLPH--LRFAKSPQGPTYTCQILEYALAADIANSQ 504 DFV + PLGVTH + + + + L+ A++PQGPT T Q+L+Y+L DI Sbjct: 65 NKLKDFVVMCGPLGVTHLFMFTQSEKTGNVSLKIARTPQGPTVTFQVLDYSLGRDIKKFL 124 Query: 505 KRPRC-PAEIFKNSPLVVLSGFNGL---GEPF------KSFVTFFRHLVPAIDTDTVKLS 654 KRP+ + N PL+VL+GF+ GE K V+ F+++ P ++ L+ Sbjct: 125 KRPKSLNNDDVLNPPLLVLNGFSTSKRSGEDDQDVNVEKVIVSMFQNIFPPLNPARTSLN 184 Query: 655 TCQRILLLQCDKETEVIDFRHYSIKLQPVGVSRKIRKLMQ-----NNQVPDLRDLKDVSD 819 + +R+ ++ D+ET I RHY I ++ V +SR +++L + + VP+L +D+S Sbjct: 185 SIKRVFMINKDRETGEISMRHYFIDIREVEISRNLKRLYKAKNNLSKTVPNLHRKEDISS 244 Query: 820 YVTK---AGYGSESEPDDEAA-------------TVSLASD------------------- 894 + Y SESE +D+A + SL S Sbjct: 245 LILDHDLGAYTSESEIEDDAIVRVVDNQDVKAKHSQSLKSQRTPVEKKDNKEREKETEEE 304 Query: 895 ---------IDKLNRASRKSAVRLQEIGPRMTMRLVKVESGLCSGDVLYPQSV 1026 + L RK A++L E+GPR+T++LVK+E G+CSG VL+ + V Sbjct: 305 DVEMEEPKPSENLQPTPRKKAIKLTELGPRLTLKLVKIEEGICSGKVLHHEFV 357
>Q12153:SSF2_YEAST Ribosome biogenesis protein SSF2 - Saccharomyces cerevisiae (Baker's| yeast) Length = 453 Score = 140 bits (352), Expect = 1e-32 Identities = 103/345 (29%), Positives = 166/345 (48%), Gaps = 67/345 (19%) Frame = +1 Query: 193 QVTGER---IPKSFVFSRGKLP---STLRHLQQDLRKLMLPYTAXXXXXXXXXXXXDFVN 354 Q+T E+ IPKS V G+ +L L +D R++M P+TA DFV Sbjct: 13 QITPEQERDIPKSMVIRVGQTSLANHSLNQLVKDFRQIMQPHTAVKLKERKSNKLKDFVV 72 Query: 355 VASPLGVTHFLILSNPKSLPH--LRFAKSPQGPTYTCQILEYALAADIANSQKRPRC-PA 525 + PLGVTH + + + + L+ A++PQGPT T Q+L+Y+L DI KRP+ Sbjct: 73 MCGPLGVTHLFMFTQSEKTGNVSLKIARTPQGPTVTFQVLDYSLGRDIKKFLKRPKSLNN 132 Query: 526 EIFKNSPLVVLSGFNGLGEPF---------KSFVTFFRHLVPAIDTDTVKLSTCQRILLL 678 + N PL+VL+GF+ K V+ F+++ P ++ L++ +RI ++ Sbjct: 133 DDVLNPPLLVLNGFSTSKRSDEDDQDVNVEKVIVSMFQNIFPPLNPARTSLNSIKRIFMI 192 Query: 679 QCDKETEVIDFRHYSIKLQPVGVSRKIRKLMQ-----NNQVPDLRDLKDVSDYVTK---A 834 D+ET I RHY I ++ V +SR +++L + + VP+L +D+S + Sbjct: 193 NKDRETGEISMRHYFIDIREVEISRNLKRLYKAKNNLSKTVPNLHRKEDISSLILDHDLG 252 Query: 835 GYGSESEPDDEA--------------ATVSLASDI------------------------- 897 Y SESE +D+A + SL+ Sbjct: 253 AYTSESEIEDDAIVRVVDNQDVKAKHSQTSLSQKTPVKMTDNEEREKGIEEEDVEMEEPK 312 Query: 898 --DKLNRASRKSAVRLQEIGPRMTMRLVKVESGLCSGDVLYPQSV 1026 + RK A++L E+GPR+T++LVK+E G+CSG VL+ + V Sbjct: 313 PSENSQPTPRKKAIKLTELGPRLTLKLVKIEDGICSGKVLHHEFV 357
>P48829:ZP2_RABIT Zona pellucida sperm-binding protein 2 precursor - Oryctolagus| cuniculus (Rabbit) Length = 666 Score = 32.7 bits (73), Expect = 3.2 Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 4/111 (3%) Frame = +1 Query: 466 LEYALAADIANSQKRPRCPAEIFKNSPLVVLSGFNGLGEPFKSFVTFFRHLVPAIDTDTV 645 L + L D ++ P CP + SP ++SG + F F + PA++ DT+ Sbjct: 289 LTFNLELDTVSTVINPECPCD----SPASIVSGELCTQDGFMDFEVYTHQTKPALNLDTL 344 Query: 646 KL--STCQRILLLQCDKETEVIDFRHYSIKLQPVGVSRKI--RKLMQNNQV 786 ++ S+CQ + Q ++ FR I L G K K++ N+V Sbjct: 345 RVGSSSCQPVFKAQ---SQGLVRFR---IPLNGCGTRHKFEDEKVIYENEV 389 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 162,930,072 Number of extensions: 2970934 Number of successful extensions: 8075 Number of sequences better than 10.0: 9 Number of HSP's gapped: 8058 Number of HSP's successfully gapped: 11 Length of query: 414 Length of database: 100,686,439 Length adjustment: 116 Effective length of query: 298 Effective length of database: 68,868,219 Effective search space: 20522729262 Effective search space used: 20522729262 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
