ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf66l24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os01g0235100:Os01g0235100 | 159 | 3e-39 | 2 | Os08g0143600:Os08g0143600 | 32 | 0.60 | 3 | Os07g0453000:Os07g0453000 | 31 | 1.0 | 4 | AF262215:Os03g0246800 | 31 | 1.0 | 5 | AK102770:Os03g0246800 | 31 | 1.0 | 6 | AK070145:Os03g0246800 | 31 | 1.0 | 7 | AK068209:Os03g0246800 | 31 | 1.0 | 8 | AK102622:Os04g0347900 | 31 | 1.0 | 9 | AK109087:Os05g0546400 | 25 | 1.6 | 10 | X95402:Os03g0327600 | 30 | 2.3 | 11 | AK069815:Os03g0327600 | 30 | 2.3 | 12 | AK100243:Os11g0579100 | 29 | 5.1 | 13 | AK072343:Os03g0254900 | 29 | 5.1 | 14 | Os11g0657400:Os11g0657400 | 29 | 5.1 | 15 | AK105903:Os04g0644400 | 28 | 6.7 | 16 | AK105778:Os04g0644400 | 28 | 6.7 | 17 | AK104623:Os04g0644400 | 28 | 6.7 | 18 | AK071989:Os04g0644400 | 28 | 6.7 | 19 | AK068728:Os01g0564400 | 28 | 6.7 | 20 | AK061322:Os04g0644400 | 28 | 6.7 | 21 | AK071766:Os02g0678400 | 28 | 6.7 | 22 | Os04g0489200:Os04g0489200 | 28 | 8.7 | 23 | AK108934: | 28 | 8.7 | 24 | AK107259: | 28 | 8.8 |
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>Os01g0235100:Os01g0235100 | Length = 229 Score = 159 bits (401), Expect = 3e-39 Identities = 90/175 (51%), Positives = 101/175 (57%), Gaps = 7/175 (4%) Frame = +3 Query: 159 ASSLWLLQLXXXXXXXXXXXHGAVFLSTNHCXXXXXXXXXXLLHRKHAPARARGNLACXX 338 A+SLWL H VFL+ N LL +KH P ARG++ C Sbjct: 2 AASLWL---QLPAPPASAAVHNPVFLTGN--------LSSSLLCKKH-PQAARGSILCSS 49 Query: 339 XXXXXXXXXXVVTKDQEGXXXXXXXXXX-------VRYDYKDDPNFRGCKGCGREEPERG 497 VVTK+QE Y+DDPNFRGC+GCGREE ERG Sbjct: 50 SSSSNSSAS-VVTKEQEAVAAASSSQEEGVAVSETEFVSYRDDPNFRGCRGCGREEVERG 108 Query: 498 CNGEGRIMGGIAAVPLFGWWPIKAYRPCPGFVASGGRYRRYGQSMDDVIAGKGRK 662 CNGEGRI GGIA VP FGWWPIKAYRPCPGFVASGGRYRR GQSMDDV +G+G+K Sbjct: 109 CNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYRRQGQSMDDVASGRGKK 163
>Os08g0143600:Os08g0143600 | Length = 481 Score = 32.0 bits (71), Expect = 0.60 Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%) Frame = -2 Query: 602 AGGDETRARPVGLDRPPPEQGDGGYAAHDPSFA---VAAPLWFLTAAPLATPEVRVI-LV 435 A GD RA P P Q G Y P FA V P W +AAP A ++ V Sbjct: 161 APGDRARAAP-------PLQDGGAYRVTAPLFATSSVGLPAWLASAAPCAAQRTSLVGYV 213 Query: 434 VVSDS 420 V DS Sbjct: 214 AVCDS 218
>Os07g0453000:Os07g0453000 | Length = 1079 Score = 31.2 bits (69), Expect = 1.0 Identities = 23/72 (31%), Positives = 30/72 (41%) Frame = -3 Query: 655 PLPAMTSSML*P*RRYRPPEATKPGHGR*ALIGHHPNKGTAAMPPMIRPSPLQPLSGSSR 476 P + SS P R+ P + P HG H P+ M P + P P +P S + Sbjct: 507 PGASQGSSPASPLRQASPAHSPGPAHGI-----HPPSAEAPWMLPPLPPVPTRPRSVRNP 561 Query: 475 PHPLQPLKLGSS 440 P QP LG S Sbjct: 562 TAPHQPTALGES 573
>AF262215:Os03g0246800 | Length = 1789 Score = 31.2 bits (69), Expect = 1.0 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = -3 Query: 550 PNKGTAAMPPMIRPSPLQPLSGSSRPHPLQPLKLGSS 440 P AA P SP P S SS+P PL+ L L S Sbjct: 59 PPPAAAAQAPSTPTSPTTPTSSSSQPGPLRSLSLADS 95
>AK102770:Os03g0246800 | Length = 712 Score = 31.2 bits (69), Expect = 1.0 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = -3 Query: 550 PNKGTAAMPPMIRPSPLQPLSGSSRPHPLQPLKLGSS 440 P AA P SP P S SS+P PL+ L L S Sbjct: 30 PPPAAAAQAPSTPTSPTTPTSSSSQPGPLRSLSLADS 66
>AK070145:Os03g0246800 | Length = 499 Score = 31.2 bits (69), Expect = 1.0 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = -3 Query: 550 PNKGTAAMPPMIRPSPLQPLSGSSRPHPLQPLKLGSS 440 P AA P SP P S SS+P PL+ L L S Sbjct: 30 PPPAAAAQAPSTPTSPTTPTSSSSQPGPLRSLSLADS 66
>AK068209:Os03g0246800 | Length = 684 Score = 31.2 bits (69), Expect = 1.0 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = -3 Query: 550 PNKGTAAMPPMIRPSPLQPLSGSSRPHPLQPLKLGSS 440 P AA P SP P S SS+P PL+ L L S Sbjct: 59 PPPAAAAQAPSTPTSPTTPTSSSSQPGPLRSLSLADS 95
>AK102622:Os04g0347900 | Length = 633 Score = 31.2 bits (69), Expect = 1.0 Identities = 19/58 (32%), Positives = 26/58 (44%) Frame = +1 Query: 1 ADDVRGRRFILHSFPTSPLHFSLVPWSRYSPGERKRGAGRECGTSTPTPEKWRPPPSG 174 A + R F+L SP+ + +P+ YSP RG + STP K R SG Sbjct: 528 AQEQRSEHFMLKGATRSPMIRTPIPYGHYSP--LTRGKAKSSSVSTPESLKLRRTRSG 583
>AK109087:Os05g0546400 | Length = 210 Score = 25.4 bits (54), Expect(2) = 1.6 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = -2 Query: 620 VAPVPTAGGDETRARPVGLDRPPPEQGDGGY 528 V P+ GG RP G PPP G GG+ Sbjct: 70 VTPLADGGGGGVLRRPPGRGPPPP--GPGGH 98 Score = 23.9 bits (50), Expect(2) = 1.6 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%) Frame = -3 Query: 535 AAMPPMIRPSPLQPLS-GSSRPHPLQP 458 A PP +P+QPLS G RP L P Sbjct: 134 APPPPPDPNTPVQPLSGGDGRPRQLAP 160
>X95402:Os03g0327600 | Length = 348 Score = 30.0 bits (66), Expect = 2.3 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = -2 Query: 569 GLDRPPPEQGDGGYAAHDPSFAV 501 G D+PP G GG AH P+F + Sbjct: 11 GQDQPPQHHGGGGGGAHQPTFKI 33
>AK069815:Os03g0327600 | Length = 348 Score = 30.0 bits (66), Expect = 2.3 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = -2 Query: 569 GLDRPPPEQGDGGYAAHDPSFAV 501 G D+PP G GG AH P+F + Sbjct: 11 GQDQPPQHHGGGGGGAHQPTFKI 33
>AK100243:Os11g0579100 | Length = 852 Score = 28.9 bits (63), Expect = 5.1 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 3/35 (8%) Frame = -2 Query: 608 PTAGGDETRARPV---GLDRPPPEQGDGGYAAHDP 513 P + GD+ + P G D+PPP Q DGG P Sbjct: 88 PQSDGDDKQQPPPQSDGSDQPPPPQPDGGDTEQQP 122
>AK072343:Os03g0254900 | Length = 481 Score = 28.9 bits (63), Expect = 5.1 Identities = 22/74 (29%), Positives = 30/74 (40%) Frame = -3 Query: 688 SLFFFSEASFRPLPAMTSSML*P*RRYRPPEATKPGHGR*ALIGHHPNKGTAAMPPMIRP 509 S+FFF F L + P R R A GHG + GHH + PP Sbjct: 42 SIFFFLRYFFVSLNLESRRGGSPGHRRRGSAAQ--GHGHHQVHGHHHQPSSPPPPPPPES 99 Query: 508 SPLQPLSGSSRPHP 467 SP + ++ P+P Sbjct: 100 SPSHYVFAAATPYP 113
>Os11g0657400:Os11g0657400 | Length = 1399 Score = 28.9 bits (63), Expect = 5.1 Identities = 24/104 (23%), Positives = 33/104 (31%), Gaps = 1/104 (0%) Frame = +1 Query: 43 PTSPLHFSLVPWSRYSPGERKRGAGRECGTSTPTPEKWRP-PPSGCCSSRXXXXXXXXXX 219 P +P + P P E+ TS PTPE++ P PP Sbjct: 729 PPAPEGHTPSPPKSSPPEEKSPPIPPTSHTSPPTPEEYTPSPPKSSPPEEKSPPPHSPEK 788 Query: 220 TAPSSSRPITAPXXXXXXXXXCCTGSTRRPEPEAILPAAHLVAP 351 + PS + P + P S PE P+ H P Sbjct: 789 SPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSPSPPSGHEGTP 832
>AK105903:Os04g0644400 | Length = 290 Score = 28.5 bits (62), Expect = 6.7 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -3 Query: 541 GTAAMPPMIRPSPLQPLSGSSRPHPLQPLKLG 446 G A PP P+P P SS P+ LKLG Sbjct: 188 GRKACPPSPTPTPSTPTPSSSDTCPIDALKLG 219
>AK105778:Os04g0644400 | Length = 290 Score = 28.5 bits (62), Expect = 6.7 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -3 Query: 541 GTAAMPPMIRPSPLQPLSGSSRPHPLQPLKLG 446 G A PP P+P P SS P+ LKLG Sbjct: 188 GRKACPPSPTPTPSTPTPSSSDTCPIDALKLG 219
>AK104623:Os04g0644400 | Length = 290 Score = 28.5 bits (62), Expect = 6.7 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -3 Query: 541 GTAAMPPMIRPSPLQPLSGSSRPHPLQPLKLG 446 G A PP P+P P SS P+ LKLG Sbjct: 188 GRKACPPSPTPTPSTPTPSSSDTCPIDALKLG 219
>AK071989:Os04g0644400 | Length = 290 Score = 28.5 bits (62), Expect = 6.7 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -3 Query: 541 GTAAMPPMIRPSPLQPLSGSSRPHPLQPLKLG 446 G A PP P+P P SS P+ LKLG Sbjct: 188 GRKACPPSPTPTPSTPTPSSSDTCPIDALKLG 219
>AK068728:Os01g0564400 | Length = 153 Score = 28.5 bits (62), Expect = 6.7 Identities = 21/53 (39%), Positives = 22/53 (41%) Frame = -3 Query: 613 RYRPPEATKPGHGR*ALIGHHPNKGTAAMPPMIRPSPLQPLSGSSRPHPLQPL 455 R PP T P R AL P PP SP P SG+S P P PL Sbjct: 16 RATPPFPTSP---RDALASRIPAAPLLLQPPPPGASPPLPHSGASPPPPPAPL 65
>AK061322:Os04g0644400 | Length = 290 Score = 28.5 bits (62), Expect = 6.7 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -3 Query: 541 GTAAMPPMIRPSPLQPLSGSSRPHPLQPLKLG 446 G A PP P+P P SS P+ LKLG Sbjct: 188 GRKACPPSPTPTPSTPTPSSSDTCPIDALKLG 219
>AK071766:Os02g0678400 | Length = 203 Score = 28.5 bits (62), Expect = 6.7 Identities = 29/95 (30%), Positives = 35/95 (36%), Gaps = 3/95 (3%) Frame = +1 Query: 91 PGERKRGAGRECGTSTPTPEKWRPPPSGCCSSRXXXXXXXXXXTAPSSSR--PITAPXXX 264 P R+R R +S+ T P SG CS+ TAP +SR P + P Sbjct: 50 PRSRRRPRSRRRTSSSSTAG---PGGSGACSASSAPRGASPSPTAPGASRTAPSSRPTST 106 Query: 265 XXXXXXCCTGSTRRPEPEA-ILPAAHLVAPRPQLP 366 C S R P A A APRP P Sbjct: 107 RSRPPTC---SMPRGSPAAPTSTGARPTAPRPSAP 138
>Os04g0489200:Os04g0489200 | Length = 307 Score = 28.1 bits (61), Expect = 8.7 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Frame = -3 Query: 607 RPPEATKPGHGR*ALIGHHPNKGTAAMPPM---IRPSPLQPLSGSSR 476 RPP + + GH A G P +G A PP+ + P +P S+R Sbjct: 208 RPPASARCGHPPSARRGRRPPRGVAHRPPLAAAVGPRAPRPRPPSAR 254
>AK108934: | Length = 662 Score = 28.1 bits (61), Expect = 8.7 Identities = 16/41 (39%), Positives = 18/41 (43%) Frame = -2 Query: 617 APVPTAGGDETRARPVGLDRPPPEQGDGGYAAHDPSFAVAA 495 AP P A +P+ PPP GG P FAVAA Sbjct: 142 APAPAAAIPAVELQPISKPPPPPVAATGGAPPPSP-FAVAA 181
>AK107259: | Length = 569 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = +1 Query: 19 RRFILHSFPTSPLHFSLVPWSRYSPGERKRGAGRECGTSTPTPEKWR 159 R ++ ++ P S +PW+RY+ GE + G G T P+ +R Sbjct: 508 RSYVSFTYYHDPSRLSSLPWTRYTTGEVLQLKG---GNVTTVPDTFR 551 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 25,522,019 Number of extensions: 649748 Number of successful extensions: 3190 Number of sequences better than 10.0: 24 Number of HSP's gapped: 3164 Number of HSP's successfully gapped: 25 Length of query: 300 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 200 Effective length of database: 11,395,755 Effective search space: 2279151000 Effective search space used: 2279151000 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
