>P47974:TISD_HUMAN Butyrate response factor 2 - Homo sapiens (Human)|
          Length = 494
 Score = 32.7 bits (73), Expect = 2.0
 Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
 Frame = +1

Query: 16  GRRFILH-SFPTSP---LHFSLVPWSRYSPGERKRGAGRECGTSTPTPEKWRPPPSGCCS 183
           G R  LH  FP  P   LH SL  +S +  G  +   G E      +P    PPP  C S
Sbjct: 237 GTRDALHLGFPREPRPKLHHSL-SFSGFPSGHHQPPGGLESPLLLDSPTSRTPPPPSCSS 295

Query: 184 SRXXXXXXXXXXTAPSSSRPITAP 255
           +           +A ++S P  AP
Sbjct: 296 ASSCSSSASSCSSASAASTPSGAP 319

>Q6HA10:GDF6_RAT Growth/differentiation factor 6 precursor - Rattus norvegicus (Rat)|
          Length = 452

 Score = 32.7 bits (73), Expect = 2.0
 Identities = 25/54 (46%), Positives = 31/54 (57%)
 Frame = +2

Query: 557 ADQGLPAVPGFRRLRRSVPALRSEHGRRHSRQGTETRLREEEK*QMIHLNLKEL 718
           A   LP+ PG RR R    AL S HG+RH   G ++RLR   K   +H+N KEL
Sbjct: 319 AGSWLPS-PGRRRRRT---ALSSRHGKRH---GKKSRLRCSRK--PLHVNFKEL 363

>P41484:PRA_MYCLE Proline-rich antigen - Mycobacterium leprae|
          Length = 249

 Score = 32.3 bits (72), Expect = 2.7
 Identities = 20/60 (33%), Positives = 22/60 (36%)
 Frame = -2

Query: 671 GGEFPSLAGYDVVHALTVAPVPTAGGDETRARPVGLDRPPPEQGDGGYAAHDPSFAVAAP 492
           GG  PS A  ++  A      P  GG      P G   PPP    G Y    PS    AP
Sbjct: 23  GGYEPSFAPSELGSAYPPPTAPPVGGSYPPPPPPGGSYPPPPPPGGSYPPPPPSTGAYAP 82

>P45561:AMEL_PIG Amelogenin precursor - Sus scrofa (Pig)|
          Length = 189

 Score = 32.3 bits (72), Expect = 2.7
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -3

Query: 556 HHPNKGTAAMPPM----IRPSPLQPLSGSSRPHPLQPL 455
           H PN    A  P     ++P P QPL   S  HP+QPL
Sbjct: 116 HQPNLPLPAQQPFQPQPVQPQPHQPLQPQSPMHPIQPL 153

>Q9JHX2:SP5_MOUSE Transcription factor Sp5 - Mus musculus (Mouse)|
          Length = 398

 Score = 32.0 bits (71), Expect = 3.5
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
 Frame = -3

Query: 622 P*RRYRPPEATKPGHGR*ALIGHHPNKGTAAMPPMIRPS-------PLQPLSGSSRPHPL 464
           P R + P  A  P H   AL   HP+ G       ++PS       PL P +  S P+  
Sbjct: 66  PSRLFHPWTADMPAHSPGALPPPHPSLGLTPQKTHLQPSFGAAHELPLTPPADPSYPYEF 125

Query: 463 QPLKL 449
            P+K+
Sbjct: 126 SPVKM 130

>Q6BEB4:SP5_HUMAN Transcription factor Sp5 - Homo sapiens (Human)|
          Length = 398

 Score = 32.0 bits (71), Expect = 3.5
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
 Frame = -3

Query: 622 P*RRYRPPEATKPGHGR*ALIGHHPNKGTAAMPPMIRPS-------PLQPLSGSSRPHPL 464
           P R + P  A  P H   AL   HP+ G       ++PS       PL P +  S P+  
Sbjct: 66  PSRLFHPWTADMPAHSPGALPPPHPSLGLTPQKTHLQPSFGAAHELPLTPPADPSYPYEF 125

Query: 463 QPLKL 449
            P+K+
Sbjct: 126 SPVKM 130

>Q6NWC6:CPSF6_DANRE Cleavage and polyadenylation specificity factor 6 - Danio rerio|
           (Zebrafish) (Brachydanio rerio)
          Length = 545

 Score = 32.0 bits (71), Expect = 3.5
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = -3

Query: 604 PPEATKPGHGR*ALIGHHPNKGTAAMPPMIRPSPL-QPLSGSSRPHPLQP 458
           PP    PG G    +G  PN+G    PP++ P    QP  G   P P  P
Sbjct: 249 PPGPPPPGQGLPPPLGGPPNRGDRPPPPVLFPGQFGQPPMGPMPPGPPPP 298

>Q04205:TENS_CHICK Tensin - Gallus gallus (Chicken)|
          Length = 1744

 Score = 31.2 bits (69), Expect = 5.9
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
 Frame = -2

Query: 662 FPSL--AGYDVVHALTVAPVPTAGGDETRARPV------GLDRPPPEQGDGGYAAHDPSF 507
           FP++  A Y+   AL  AP  +    E   R +      G  RPP +  DGG  +H PS 
Sbjct: 709 FPAVGTAKYEANLALPQAPARSTSSREAVQRGLNSWQQQGGSRPPSQLHDGGLESHSPSL 768

Query: 506 AVAAP 492
           +  +P
Sbjct: 769 SSCSP 773

>P43028:GDF6_MOUSE Growth/differentiation factor 6 precursor - Mus musculus (Mouse)|
          Length = 454

 Score = 31.2 bits (69), Expect = 5.9
 Identities = 24/54 (44%), Positives = 30/54 (55%)
 Frame = +2

Query: 557 ADQGLPAVPGFRRLRRSVPALRSEHGRRHSRQGTETRLREEEK*QMIHLNLKEL 718
           A   LP+ PG RR R    A  S HG+RH   G ++RLR   K   +H+N KEL
Sbjct: 321 AGSWLPS-PGRRRRRT---AFASRHGKRH---GKKSRLRCSRK--PLHVNFKEL 365

>Q6KF10:GDF6_HUMAN Growth/differentiation factor 6 precursor - Homo sapiens (Human)|
          Length = 455

 Score = 31.2 bits (69), Expect = 5.9
 Identities = 21/46 (45%), Positives = 27/46 (58%)
 Frame = +2

Query: 581 PGFRRLRRSVPALRSEHGRRHSRQGTETRLREEEK*QMIHLNLKEL 718
           PG RR R    A  S HG+RH   G ++RLR  +K   +H+N KEL
Sbjct: 329 PGRRRRRT---AFASRHGKRH---GKKSRLRCSKK--PLHVNFKEL 366

>Q99MA0:CITE4_RAT Cbp/p300-interacting transactivator 4 - Rattus norvegicus (Rat)|
          Length = 179

 Score = 30.8 bits (68), Expect = 7.8
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = -3

Query: 601 PEATKPGHGR*AL-IGHHPNKGTAAMPPMIR--PSPLQPLSGSSRPHPLQP 458
           P +  PG G   L     P+ G    PP     PSPLQP  G++ P PL P
Sbjct: 66  PVSQPPGAGNAHLQSAATPSPGRMPAPPSAAGGPSPLQPAPGAASPLPLPP 116


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 142,480,229
Number of extensions: 3102812
Number of successful extensions: 10404
Number of sequences better than 10.0: 11
Number of HSP's gapped: 10354
Number of HSP's successfully gapped: 11
Length of query: 300
Length of database: 100,686,439
Length adjustment: 113
Effective length of query: 187
Effective length of database: 69,691,104
Effective search space: 13032236448
Effective search space used: 13032236448
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)