>ref|NM_001049054.1| Oryza sativa (japonica cultivar-group) Os01g0235100 (Os01g0235100)
           mRNA, complete cds
          Length = 690
 Score =  167 bits (84), Expect = 9e-38
 Identities = 174/204 (85%)
 Strand = Plus / Plus

                                                                       
Query: 434 ctacaaggatgaccctaacttcaggggttgcaaggggtgcggccgtgaggaaccagagag 493
           ||||| ||||||||| ||||||||||| ||||  |||||||| || |||||    |||||
Sbjct: 261 ctacagggatgaccccaacttcaggggatgcagagggtgcgggcgggaggaggtggagag 320

                                                                       
Query: 494 gggctgcaacggcgaaggacggatcatgggcggcatagccgccgtccccttgttcgggtg 553
           ||| ||||||||||| || ||||||  ||||||||||||| ||||||||   ||||||||
Sbjct: 321 gggttgcaacggcgaggggcggatccagggcggcatagccaccgtccccggcttcgggtg 380

                                                                       
Query: 554 gtggccgatcaaggcctaccggccgtgcccgggtttcgtcgcctccggcggtcggtaccg 613
           |||||| |||||||| |||||||||||||| || ||||||||||||||||| ||||||||
Sbjct: 381 gtggcctatcaaggcgtaccggccgtgccccggcttcgtcgcctccggcggccggtaccg 440

                                   
Query: 614 gcgctacggtcagagcatggacga 637
           | |  | || ||||||||||||||
Sbjct: 441 gaggcaggggcagagcatggacga 464

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  145 bits (73), Expect = 3e-31
 Identities = 130/149 (87%)
 Strand = Plus / Plus

                                                                           
Query: 489     gagaggggctgcaacggcgaaggacggatcatgggcggcatagccgccgtccccttgttc 548
               |||||||| ||||||||||| || ||||||  ||||||||||||| ||||||||   |||
Sbjct: 7457857 gagaggggttgcaacggcgaggggcggatccagggcggcatagccaccgtccccggcttc 7457916

                                                                           
Query: 549     gggtggtggccgatcaaggcctaccggccgtgcccgggtttcgtcgcctccggcggtcgg 608
               ||||||||||| |||||||| |||||||||||||| || ||||||||||||||||| |||
Sbjct: 7457917 gggtggtggcctatcaaggcgtaccggccgtgccccggcttcgtcgcctccggcggccgg 7457976

                                            
Query: 609     taccggcgctacggtcagagcatggacga 637
               |||||| |  | || ||||||||||||||
Sbjct: 7457977 taccggaggcaggggcagagcatggacga 7458005

>dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0702F03
          Length = 141111

 Score =  145 bits (73), Expect = 3e-31
 Identities = 130/149 (87%)
 Strand = Plus / Plus

                                                                          
Query: 489    gagaggggctgcaacggcgaaggacggatcatgggcggcatagccgccgtccccttgttc 548
              |||||||| ||||||||||| || ||||||  ||||||||||||| ||||||||   |||
Sbjct: 118885 gagaggggttgcaacggcgaggggcggatccagggcggcatagccaccgtccccggcttc 118944

                                                                          
Query: 549    gggtggtggccgatcaaggcctaccggccgtgcccgggtttcgtcgcctccggcggtcgg 608
              ||||||||||| |||||||| |||||||||||||| || ||||||||||||||||| |||
Sbjct: 118945 gggtggtggcctatcaaggcgtaccggccgtgccccggcttcgtcgcctccggcggccgg 119004

                                           
Query: 609    taccggcgctacggtcagagcatggacga 637
              |||||| |  | || ||||||||||||||
Sbjct: 119005 taccggaggcaggggcagagcatggacga 119033

>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
            clone:P0708G02
          Length = 168976

 Score =  145 bits (73), Expect = 3e-31
 Identities = 130/149 (87%)
 Strand = Plus / Plus

                                                                        
Query: 489  gagaggggctgcaacggcgaaggacggatcatgggcggcatagccgccgtccccttgttc 548
            |||||||| ||||||||||| || ||||||  ||||||||||||| ||||||||   |||
Sbjct: 6649 gagaggggttgcaacggcgaggggcggatccagggcggcatagccaccgtccccggcttc 6708

                                                                        
Query: 549  gggtggtggccgatcaaggcctaccggccgtgcccgggtttcgtcgcctccggcggtcgg 608
            ||||||||||| |||||||| |||||||||||||| || ||||||||||||||||| |||
Sbjct: 6709 gggtggtggcctatcaaggcgtaccggccgtgccccggcttcgtcgcctccggcggccgg 6768

                                         
Query: 609  taccggcgctacggtcagagcatggacga 637
            |||||| |  | || ||||||||||||||
Sbjct: 6769 taccggaggcaggggcagagcatggacga 6797

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 284     gctgcacaggaagcacgcgccg 305
               ||||||||||||||||||||||
Sbjct: 3052459 gctgcacaggaagcacgcgccg 3052438

>dbj|AK096771.1| Homo sapiens cDNA FLJ39452 fis, clone PROST2009795
          Length = 2198

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 242 caatcactgcccctctcctcct 263
           ||||||||||||||||||||||
Sbjct: 949 caatcactgcccctctcctcct 928

>emb|CR932777.1| Human DNA sequence from clone XX-NCIH2171_7H20, complete sequence
          Length = 115459

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 242   caatcactgcccctctcctcct 263
             ||||||||||||||||||||||
Sbjct: 67417 caatcactgcccctctcctcct 67438

>gb|U47924.1|HSU47924 Human chromosome 12p13 sequence, complete sequence
          Length = 222930

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 242   caatcactgcccctctcctcct 263
             ||||||||||||||||||||||
Sbjct: 50617 caatcactgcccctctcctcct 50596

>ref|XM_315444.2| Anopheles gambiae str. PEST ENSANGP00000014065
           (ENSANGG00000011576), partial mRNA
          Length = 2181

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 394 cagcagcagccgctccaactccggca 419
           ||||||||||||||||| ||||||||
Sbjct: 627 cagcagcagccgctccagctccggca 602

>emb|CT030035.11| Mouse DNA sequence from clone RP24-192J9 on chromosome 13, complete
              sequence
          Length = 183134

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 38     cttttcccacatcccccctcc 58
              |||||||||||||||||||||
Sbjct: 132655 cttttcccacatcccccctcc 132635

>emb|BX470115.19| Zebrafish DNA sequence from clone CH211-234C11 in linkage group 23,
              complete sequence
          Length = 185756

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 336    tcatctggtagctcctcgtcctcaacttcctcc 368
              |||||| |||| |||||||| ||||||||||||
Sbjct: 153418 tcatcttgtagatcctcgtcatcaacttcctcc 153386

>emb|BX957234.7| Zebrafish DNA sequence from clone CH211-286L10 in linkage group 23,
             complete sequence
          Length = 180834

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 336   tcatctggtagctcctcgtcctcaacttcctcc 368
             |||||| |||| |||||||| ||||||||||||
Sbjct: 18942 tcatcttgtagatcctcgtcatcaacttcctcc 18910

>emb|AL356583.28| Human DNA sequence from clone RP11-690C23 on chromosome 1 Contains the 5'
              end of the SMYD3 gene for SET and MYND domain containing 3,
              an ubiquitin specific protease 6 (Tre-2 oncogene) (USP6)
              pseudogene, a novel gene, a pseudogene similar to part of
              tumor necrosis factor receptor superfamily member 13B
              (TNFRSF13B), a pseudogene similar to part of
              carboxypeptidase D (CPD), the TFB2M gene for mitochondrial
              transcription factor B2, the 5' end of the gene for a novel
              protein (FLJ32001, DKFZp451A152, DKFZp451B077, FLJ00215)
              and two CpG islands, complete sequence
          Length = 207486

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 689    caaatgatccacctcaacctc 709
              |||||||||||||||||||||
Sbjct: 199510 caaatgatccacctcaacctc 199530

>gb|AF146528.1|AF146528 Plasmodium yoelii rhoptry complex polypeptide Rhop-3 mRNA, partial
           cds
          Length = 586

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 852 atctaataatagaagtaaaac 872
           |||||||||||||||||||||
Sbjct: 194 atctaataatagaagtaaaac 214

>emb|AL669869.10| Mouse DNA sequence from clone RP23-198E14 on chromosome 11 Contains the
             3' end of the Mgl2 gene for macrophage galactose
             N-acetyl-galactosamine specific lectin 2, the Mgl1 gene
             for macrophage galactose N-acetyl-galactosamine specific
             lectin 1, the gene for a novel RNA polymerase Rpb1
             C-terminal repeat domain containing protein, three novel
             genes, the Bcl6b gene for B-cell CLL/lymphoma 6 member B,
             the Alox12 gene for arachidonate 12-lipoxygenase and four
             CpG islands, complete sequence
          Length = 174390

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 741   caaccttcatagattttgttt 761
             |||||||||||||||||||||
Sbjct: 53816 caaccttcatagattttgttt 53796

>emb|CR933731.5| Mouse DNA sequence from clone DN-160I24 on chromosome 11, complete
             sequence
          Length = 212982

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 741   caaccttcatagattttgttt 761
             |||||||||||||||||||||
Sbjct: 33834 caaccttcatagattttgttt 33814

>emb|CR749167.8| Zebrafish DNA sequence from clone DKEY-23A17 in linkage group 5, complete
              sequence
          Length = 155288

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 336    tcatctggtagctcctcgtcctcaacttcctcc 368
              |||||| |||| |||||||| ||||||||||||
Sbjct: 124010 tcatcttgtagatcctcgtcatcaacttcctcc 123978

>gb|AC016730.9| Homo sapiens BAC clone RP11-375H3 from 2, complete sequence
          Length = 172243

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 273    gcgtctcctctgctgcacagg 293
              |||||||||||||||||||||
Sbjct: 154036 gcgtctcctctgctgcacagg 154016

>dbj|AP001823.5| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2355J17, complete
              sequence
          Length = 178189

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 692    atgatccacctcaacctcaag 712
              |||||||||||||||||||||
Sbjct: 126203 atgatccacctcaacctcaag 126183

>dbj|AP000889.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-101M8, complete
             sequence
          Length = 163047

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 692   atgatccacctcaacctcaag 712
             |||||||||||||||||||||
Sbjct: 29069 atgatccacctcaacctcaag 29049

>ref|XM_721865.1| Plasmodium yoelii yoelii str. 17XNL high molecular weight rhoptry
            protein 3 (PY06325) partial mRNA
          Length = 2529

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 852  atctaataatagaagtaaaac 872
            |||||||||||||||||||||
Sbjct: 2418 atctaataatagaagtaaaac 2438

>ref|XM_724507.1| Plasmodium yoelii yoelii str. 17XNL high molecular weight rhoptry
           protein 3 (PY01798) partial mRNA
          Length = 1204

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 852 atctaataatagaagtaaaac 872
           |||||||||||||||||||||
Sbjct: 973 atctaataatagaagtaaaac 993

>dbj|AB044564.1| Plasmodium yoelii PyRhopH3 mRNA for high molecular weight rhoptry
            protein 3, complete cds
          Length = 2649

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 852  atctaataatagaagtaaaac 872
            |||||||||||||||||||||
Sbjct: 2418 atctaataatagaagtaaaac 2438

>dbj|AB044563.1| Plasmodium yoelii PyRhopH3 gene for high molecular weight rhoptry
            protein 3, complete cds
          Length = 4018

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 852  atctaataatagaagtaaaac 872
            |||||||||||||||||||||
Sbjct: 3657 atctaataatagaagtaaaac 3677


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 134,151,298
Number of extensions: 7514392
Number of successful extensions: 153173
Number of sequences better than 10.0: 24
Number of HSP's gapped: 153172
Number of HSP's successfully gapped: 24
Length of query: 900
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 877
Effective length of database: 18,503,978,556
Effective search space: 16227989193612
Effective search space used: 16227989193612
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)