ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf69n15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001072770.1| Oryza sativa (japonica cultivar-group) Os12g0165000 (Os12g0165000) mRNA, complete cds Length = 2845 Score = 1978 bits (998), Expect = 0.0 Identities = 1760/2014 (87%) Strand = Plus / Plus Query: 392 ctttcaatgcatcgtgtcgggagtgctggaaacacggccggttcaagtcgaccgagaaag 451 ||||||||||||||||| || |||||||| |||||||| ||||||||||||||||||||| Sbjct: 161 ctttcaatgcatcgtgttggaagtgctggtaacacggcaggttcaagtcgaccgagaaag 220 Query: 452 gagaaacgcttcacatatgtgctcaatgatgctgataataaaaagcattgtgctggaatc 511 ||||| ||||| ||||||||||| ||||| |||||||| ||||||||||||||||| ||| Sbjct: 221 gagaagcgctttacatatgtgctgaatgacgctgataacaaaaagcattgtgctgggatc 280 Query: 512 aactgcttgtcatacctgaatgcttctgcttctggtacaagtgattatctttttactggg 571 ||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||| ||| Sbjct: 281 aactgcttgtcatacctaaatgcctctacttctggtacgagtgattatctttttaccggg 340 Query: 572 agtcgtgatggtaccttgaagagatgggaataccaaaacggggatgcaaacttttcagca 631 ||||| ||||||||||||||||| |||||| |||| || | |||| ||| |||||| Sbjct: 341 agtcgggatggtaccttgaagaggtgggaaccaaaaaatggagtcgcaagcttctcagca 400 Query: 632 acctttgagtcacatgttgattggattaacgatgccattattgttggccaaaatcttgtt 691 || ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 401 acttttgagtcacatgttgattgggttaatgatgccattattgttggccaaaatcttgtt 460 Query: 692 tcctgttcctcagacaccacattaaaggtgtggaattgcttagcagatggtgcttgtacc 751 |||||||||||||| ||||| |||||||||||||||| ||| ||||||||||||||||| Sbjct: 461 tcctgttcctcagataccactctaaaggtgtggaattgtttatcagatggtgcttgtacc 520 Query: 752 aagactcttcgtcagcactctgattatgtgatatgtcttgctgctgctgaaaagaatagc 811 | |||||| || ||||| || ||||||||||| ||||||||||| ||||||| |||||| Sbjct: 521 aggactctccgccagcattccgattatgtgatttgtcttgctgcatctgaaaaaaatagc 580 Query: 812 aatattgtagcctccggtggccttggtggtgaggtcttcatatgggatcttgatgctgct 871 |||||||| ||||| ||||||||||| ||||||||||| |||||||| |||||| || || Sbjct: 581 aatattgttgcctctggtggccttggcggtgaggtctttatatgggaccttgattcttct 640 Query: 872 attgctcctatagccaaatctgtagatgcaaaagaggatgaggttcctaaaggaaactct 931 |||||||| | ||||||||||||||||||||||||||||| | |||||| ||||||||| Sbjct: 641 cttgctcctgtggccaaatctgtagatgcaaaagaggatgaagctcctaatggaaactct 700 Query: 932 ggacctgctttgtcaaccttgtgcaatgtaagttctagtggcaacattgtttctaccaac 991 || ||||||||| |||||||||||||||||| |||||| ||||| ||| ||| ||||| Sbjct: 701 gggcctgctttgacaaccttgtgcaatgtaaattctagcagcaaccttgcttccaccaat 760 Query: 992 ggaaaatcacatgggtacagtcctattgctgccaaaggtcacaaggattcagtttatgca 1051 || ||||||||||||||||||| || |||||||||||||||| ||||||||||||||| Sbjct: 761 gggcaatcacatgggtacagtccaatcactgccaaaggtcacaaagattcagtttatgca 820 Query: 1052 ttggatatgaatgatacagggacgttgcttgtgtctggtggtactgaaaaggttgttcgt 1111 |||| |||| ||| ||||| | ||||| |||||||||||||||||||||||||| Sbjct: 821 ttggccatgagtgacacaggaaacacacttgtctctggtggtactgaaaaggttgttcgc 880 Query: 1112 gtttgggatcccaggacaggttctaagaacatgaaattgagagggcacactgacaatatc 1171 ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 881 gtttgggatcccaggactggttcaaagaaaatgaaattgagagggcacactgacaatatc 940 Query: 1172 agggctttgcttattgattctactggaaggtattgtctatcaggctcatctgactcaatg 1231 |||||||| ||| ||||| ||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 941 agggctttacttcttgatcctactggcaggtattgtctttcaggctcatctgattcaatg 1000 Query: 1232 ataagactatgggatctaggacagcagcgctgtgtgcattcttatgccgttcacactgat 1291 |||||| |||||||||| ||||||||||| ||| | ||||||||||| || || |||||| Sbjct: 1001 ataagattatgggatctgggacagcagcgatgtattcattcttatgctgtgcatactgat 1060 Query: 1292 tcggtttgggcgcttgcaagcaccccttcatttggtcatgtttatagcggtggaagagat 1351 || || ||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||| Sbjct: 1061 tcagtctgggcgcttgcaagcactccttcgtttagtcatgtttatagtggtggaagagat 1120 Query: 1352 cagtccgtgtacctgacagacctctccacacgagagagtgtcttactatgcacaaatgaa 1411 ||||| |||||| ||||||| | || |||||||||||||| || |||||||| || Sbjct: 1121 cagtcggtgtacttgacagatttaagcaatcgagagagtgtcttgctctgcacaaacgag 1180 Query: 1412 cacccaattctacagttgtccttgcaagatgatacaatatgggttgcaacaactgattct 1471 ||||| |||||||| ||||||||||| ||||||| || ||||||||||||||||||||| Sbjct: 1181 cacccgattctacaattgtccttgcaggatgatatgatttgggttgcaacaactgattct 1240 Query: 1472 tctgtttatggatggccagctgaagggcaatccccacaaaaggtttttcaaaagggtggc 1531 ||||| |||||||| |||||||| ||| || | |||| |||| ||||| ||| Sbjct: 1241 tctgtgaatggatggaaagctgaagcgcatgaacccctaaagcttttccaaaaaggttct 1300 Query: 1532 tcattcttagctgggaatttgtcattctcaagagcgagagcttctttagaaggatcagca 1591 |||||||||||||| |||||||||||||| || || || ||||||||||||||||||||| Sbjct: 1301 tcattcttagctggcaatttgtcattctccagggcaagggcttctttagaaggatcagca 1360 Query: 1592 cctgtgcctgtatacaaagagccatctttcactattcctggagttccagctatagttcaa 1651 ||||| ||| || ||||||| ||||||| | |||||||||||||||||| ||| ||| Sbjct: 1361 cctgtccctatacacaaagaaccatcttcaattattcctggagttccagcaataactcag 1420 Query: 1652 catgagatcatgaataatagaaggcatgtcctgacaaaggatactgttggttctgtcaaa 1711 ||||||||| ||||||||||||| ||||| |||| |||||||||| ||||||||||||| Sbjct: 1421 catgagatcctgaataatagaagacatgtattgacgaaggatactgctggttctgtcaaa 1480 Query: 1712 ttatgggagattactcgaggagctgttattgaagattttggcaaggtttcgtttgatgat 1771 || |||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| Sbjct: 1481 ttgtgggagattactcgaggagctgttattgaagactttggcaaggtttcttttgaggat 1540 Query: 1772 aagaaaaaggagttgtttgagatggttagcatacctgcatggttcaccatggacgctcga 1831 |||||||| ||||||||||||||||||||||||||||| ||||| |||||||| |||||| Sbjct: 1541 aagaaaaaagagttgtttgagatggttagcatacctgcctggtttaccatggatgctcga 1600 Query: 1832 ttggggtgcctgtctgttcacctggatactccacaatgcttttctgcagaaatatatgcg 1891 ||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 1601 ttgggatgcctgtctgtccacctggatacacctcaatgcttttctgcagaaatatatgca 1660 Query: 1892 gttgatttgaatgttactggagcacaggaagatcttaagattaatttggctcatgagact 1951 ||||| || || ||| | ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1661 gttgacttaaacgttgcaggagcacaggaagatcttaagattaatttggctcaggagact 1720 Query: 1952 cttcgtggtttgttagttcattggagtaaacgaaggccaaaaccaggcccacacagcttg 2011 || ||||||||||||||||||||||||||| || || | | | ||| ||||| ||||| Sbjct: 1721 ctccgtggtttgttagttcattggagtaaaaaaaagcagagatctggctcacacggcttg 1780 Query: 2012 tccaatggtgattcttcaatagggaaagatgtatcattgaaaaatttaccccatccaaga 2071 || |||||||| |||||| ||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 1781 tcaaatggtgacacttcaacaggaaaagatgtatccttgaaaaatttgccccatccaaga 1840 Query: 2072 tccgacgttgatgatggaagcgaaaaccatgcaaataatgtacttccgtcgtttgagttc 2131 || || ||||||||||| ||||| ||||||| | | | ||||| || |||||||| Sbjct: 1841 tctgaggttgatgatggggctgaaaatcatgcaagtcagatgcttccctcatttgagttt 1900 Query: 2132 tccacggtttcacctccatcaattatcacggaaagttctagtggagggccttggagaaag 2191 ||||| ||||| ||||||||||| ||||| ||| |||| ||||||||||||||||||||| Sbjct: 1901 tccacagtttcgcctccatcaatcatcacagaaggttcaagtggagggccttggagaaag 1960 Query: 2192 agaattaccgatttggatggaaccgaggatgatttgccatggtggtgtgtagactgtgct 2251 |||||||| ||||| |||||||||||| ||| | ||||||||| ||| ||||||| | Sbjct: 1961 agaattacagatttagatggaaccgagagcgatatcccatggtggattgtggactgtgtt 2020 Query: 2252 gagaacggtcgatttccaaaagagaacacaaagtgtggcttttatttgcatccggccgaa 2311 ||| | |||||||||||||||||| ||||||||||| || || |||||||| || ||| Sbjct: 2021 gagcataatcgatttccaaaagagaatacaaagtgtggattctacttgcatcctgctgaa 2080 Query: 2312 ggctcacctgcaccaaatataacacaagggaaactcagtgctccacggatattgcgagtt 2371 || ||||||||||| || ||||||||||||||||| |||||||||||||||||||| || Sbjct: 2081 gggtcacctgcaccgaacataacacaagggaaacttagtgctccacggatattgcggatt 2140 Query: 2372 ctcaaagttgctaactatgtggttgagaagcttg 2405 | |||||| |||||||||||||| ||||| |||| Sbjct: 2141 cacaaagtagctaactatgtggtcgagaaacttg 2174 Score = 165 bits (83), Expect = 1e-36 Identities = 166/193 (86%), Gaps = 3/193 (1%) Strand = Plus / Plus Query: 2471 tcagctctagatagttcttcacggcttggactaaagccatggcaaaagctgaaaccttca 2530 ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 2243 tcagcgctagatagttcttcacggcttggactaaaaccatggcaaaaattgaaaccttct 2302 Query: 2531 gttgagatattgtgcaacaaccagcaggttctgtcacctgagatgagtttggcaacggtg 2590 || ||||||||||| |||| | |||||| || |||| || ||||| ||||| || ||| Sbjct: 2303 gtagagatattgtgtaacagc---caggttttggcacccgaaatgagcttggccacagtg 2359 Query: 2591 cggacatatatttggaagaagccggaggatttgattcttaattacagagtggtccaatca 2650 ||| | ||| | ||||||||||| ||||||||||||||||| |||| ||||||||| ||| Sbjct: 2360 cgggcttatgtctggaagaagccagaggatttgattcttaactacaaagtggtccagtca 2419 Query: 2651 agataattgcaac 2663 |||| |||||||| Sbjct: 2420 agatgattgcaac 2432 Score = 46.1 bits (23), Expect = 0.76 Identities = 50/58 (86%), Gaps = 2/58 (3%) Strand = Plus / Plus Query: 2878 catagcacaggtgtaatg--ctcagctggctaccaggcttgtatatctagagatttgg 2933 |||||||||||||||||| ||| |||||||||| ||||||| || ||| ||||||| Sbjct: 2645 catagcacaggtgtaatgatctcttctggctaccaagcttgtaaatttagggatttgg 2702
>dbj|AK111883.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060M06, full insert sequence Length = 2847 Score = 1957 bits (987), Expect = 0.0 Identities = 1759/2015 (87%), Gaps = 1/2015 (0%) Strand = Plus / Plus Query: 392 ctttcaatgcatcgtgtcgggagtgctggaaacacggccggttcaagtcgaccgagaaag 451 ||||||||||||||||| || |||||||| |||||||| ||||||||||||||||||||| Sbjct: 162 ctttcaatgcatcgtgttggaagtgctggtaacacggcaggttcaagtcgaccgagaaag 221 Query: 452 gagaaacgcttcacatatgtgctcaatgatgctgataataaaaagcattgtgctggaatc 511 ||||| ||||| ||||||||||| ||||| |||||||| ||||||||||||||||| ||| Sbjct: 222 gagaagcgctttacatatgtgctgaatgacgctgataacaaaaagcattgtgctgggatc 281 Query: 512 aactgcttgtcatacctgaatgcttctgcttctggtacaagtgattatctttttactggg 571 ||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||| ||| Sbjct: 282 aactgcttgtcatacctaaatgcctctacttctggtacgagtgattatctttttaccggg 341 Query: 572 agtcgtgatggtaccttgaagagatgggaat-accaaaacggggatgcaaacttttcagc 630 ||||| ||||||||||||||||| |||||| | |||| || | |||| ||| ||||| Sbjct: 342 agtcgggatggtaccttgaagaggtgggaaccaaaaaaatggagtcgcaagcttctcagc 401 Query: 631 aacctttgagtcacatgttgattggattaacgatgccattattgttggccaaaatcttgt 690 ||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 402 aacttttgagtcacatgttgattgggttaatgatgccattattgttggccaaaatcttgt 461 Query: 691 ttcctgttcctcagacaccacattaaaggtgtggaattgcttagcagatggtgcttgtac 750 ||||||||||||||| ||||| |||||||||||||||| ||| |||||||||||||||| Sbjct: 462 ttcctgttcctcagataccactctaaaggtgtggaattgtttatcagatggtgcttgtac 521 Query: 751 caagactcttcgtcagcactctgattatgtgatatgtcttgctgctgctgaaaagaatag 810 || |||||| || ||||| || ||||||||||| ||||||||||| ||||||| ||||| Sbjct: 522 caggactctccgccagcattccgattatgtgatttgtcttgctgcatctgaaaaaaatag 581 Query: 811 caatattgtagcctccggtggccttggtggtgaggtcttcatatgggatcttgatgctgc 870 ||||||||| ||||| ||||||||||| ||||||||||| |||||||| |||||| || | Sbjct: 582 caatattgttgcctctggtggccttggcggtgaggtctttatatgggaccttgattcttc 641 Query: 871 tattgctcctatagccaaatctgtagatgcaaaagaggatgaggttcctaaaggaaactc 930 | |||||||| | ||||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 642 tcttgctcctgtggccaaatctgtagatgcaaaagaggatgaagctcctaatggaaactc 701 Query: 931 tggacctgctttgtcaaccttgtgcaatgtaagttctagtggcaacattgtttctaccaa 990 ||| ||||||||| |||||||||||||||||| |||||| ||||| ||| ||| ||||| Sbjct: 702 tgggcctgctttgacaaccttgtgcaatgtaaattctagcagcaaccttgcttccaccaa 761 Query: 991 cggaaaatcacatgggtacagtcctattgctgccaaaggtcacaaggattcagtttatgc 1050 || ||||||||||||||||||| || |||||||||||||||| |||||||||||||| Sbjct: 762 tgggcaatcacatgggtacagtccaatcactgccaaaggtcacaaagattcagtttatgc 821 Query: 1051 attggatatgaatgatacagggacgttgcttgtgtctggtggtactgaaaaggttgttcg 1110 ||||| |||| ||| ||||| | ||||| |||||||||||||||||||||||||| Sbjct: 822 attggccatgagtgacacaggaaacacacttgtctctggtggtactgaaaaggttgttcg 881 Query: 1111 tgtttgggatcccaggacaggttctaagaacatgaaattgagagggcacactgacaatat 1170 ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 882 cgtttgggatcccaggactggttcaaagaaaatgaaattgagagggcacactgacaatat 941 Query: 1171 cagggctttgcttattgattctactggaaggtattgtctatcaggctcatctgactcaat 1230 ||||||||| ||| ||||| ||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 942 cagggctttacttcttgatcctactggcaggtattgtctttcaggctcatctgattcaat 1001 Query: 1231 gataagactatgggatctaggacagcagcgctgtgtgcattcttatgccgttcacactga 1290 ||||||| |||||||||| ||||||||||| ||| | ||||||||||| || || ||||| Sbjct: 1002 gataagattatgggatctgggacagcagcgatgtattcattcttatgctgtgcatactga 1061 Query: 1291 ttcggtttgggcgcttgcaagcaccccttcatttggtcatgtttatagcggtggaagaga 1350 ||| || ||||||||||||||||| ||||| ||| ||||||||||||| |||||||||| Sbjct: 1062 ttcagtctgggcgcttgcaagcactccttcgtttagtcatgtttatagtggtggaagagg 1121 Query: 1351 tcagtccgtgtacctgacagacctctccacacgagagagtgtcttactatgcacaaatga 1410 |||||| |||||| ||||||| | || |||||||||||||| || |||||||| || Sbjct: 1122 tcagtcggtgtacttgacagatttaagcaatcgagagagtgtcttgctctgcacaaacga 1181 Query: 1411 acacccaattctacagttgtccttgcaagatgatacaatatgggttgcaacaactgattc 1470 ||||| |||||||| ||||||||||| ||||||| || |||||||||||||||||||| Sbjct: 1182 gcacccgattctacaattgtccttgcaggatgatatgatttgggttgcaacaactgattc 1241 Query: 1471 ttctgtttatggatggccagctgaagggcaatccccacaaaaggtttttcaaaagggtgg 1530 |||||| |||||||| |||||||| ||| || | |||| |||| ||||| ||| Sbjct: 1242 ttctgtgaatggatggaaagctgaagcgcatgaacccctaaagcttttccaaaaaggttc 1301 Query: 1531 ctcattcttagctgggaatttgtcattctcaagagcgagagcttctttagaaggatcagc 1590 |||||||||||||| |||||||||||||| || || || |||||||||||||||||||| Sbjct: 1302 ttcattcttagctggcaatttgtcattctccagggcaagggcttctttagaaggatcagc 1361 Query: 1591 acctgtgcctgtatacaaagagccatctttcactattcctggagttccagctatagttca 1650 |||||| ||| || ||||||| ||||||| | |||||||||||||||||| ||| ||| Sbjct: 1362 acctgtccctatacacaaagaaccatcttcaattattcctggagttccagcaataactca 1421 Query: 1651 acatgagatcatgaataatagaaggcatgtcctgacaaaggatactgttggttctgtcaa 1710 ||||||||| ||||||||||||| ||||| |||| |||||||||| |||||||||||| Sbjct: 1422 gcatgagatcctgaataatagaagacatgtattgacgaaggatactgctggttctgtcaa 1481 Query: 1711 attatgggagattactcgaggagctgttattgaagattttggcaaggtttcgtttgatga 1770 ||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 1482 attgtgggagattactcgaggagctgttattgaagactttggcaaggtttcttttgagga 1541 Query: 1771 taagaaaaaggagttgtttgagatggttagcatacctgcatggttcaccatggacgctcg 1830 ||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 1542 taagaaaaaagagttgtttgagatggttagcatacctgcctggtttaccatggatgctcg 1601 Query: 1831 attggggtgcctgtctgttcacctggatactccacaatgcttttctgcagaaatatatgc 1890 |||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 1602 attgggatgcctgtctgtccacctggatacacctcaatgcttttctgcagaaatatatgc 1661 Query: 1891 ggttgatttgaatgttactggagcacaggaagatcttaagattaatttggctcatgagac 1950 ||||| || || ||| | ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1662 agttgacttaaacgttgcaggagcacaggaagatcttaagattaatttggctcaggagac 1721 Query: 1951 tcttcgtggtttgttagttcattggagtaaacgaaggccaaaaccaggcccacacagctt 2010 ||| ||||||||||||||||||||||||||| || || | | | ||| ||||| |||| Sbjct: 1722 tctccgtggtttgttagttcattggagtaaaaaaaagcagagatctggctcacacggctt 1781 Query: 2011 gtccaatggtgattcttcaatagggaaagatgtatcattgaaaaatttaccccatccaag 2070 ||| |||||||| |||||| ||| ||||||||||| ||||||||||| ||||||||||| Sbjct: 1782 gtcaaatggtgacacttcaacaggaaaagatgtatccttgaaaaatttgccccatccaag 1841 Query: 2071 atccgacgttgatgatggaagcgaaaaccatgcaaataatgtacttccgtcgtttgagtt 2130 ||| || ||||||||||| ||||| ||||||| | | | ||||| || |||||||| Sbjct: 1842 atctgaggttgatgatggggctgaaaatcatgcaagtcagatgcttccctcatttgagtt 1901 Query: 2131 ctccacggtttcacctccatcaattatcacggaaagttctagtggagggccttggagaaa 2190 ||||| ||||| ||||||||||| ||||| ||| |||| |||||||||||||||||||| Sbjct: 1902 ttccacagtttcgcctccatcaatcatcacagaaggttcaagtggagggccttggagaaa 1961 Query: 2191 gagaattaccgatttggatggaaccgaggatgatttgccatggtggtgtgtagactgtgc 2250 ||||||||| ||||| |||||||||||| ||| | ||||||||| ||| ||||||| Sbjct: 1962 gagaattacagatttagatggaaccgagagcgatatcccatggtggattgtggactgtgt 2021 Query: 2251 tgagaacggtcgatttccaaaagagaacacaaagtgtggcttttatttgcatccggccga 2310 |||| | |||||||||||||||||| ||||||||||| || || |||||||| || || Sbjct: 2022 tgagcataatcgatttccaaaagagaatacaaagtgtggattctacttgcatcctgctga 2081 Query: 2311 aggctcacctgcaccaaatataacacaagggaaactcagtgctccacggatattgcgagt 2370 ||| |||||||| || || ||||||||||||||||| |||||||||||||||||||| | Sbjct: 2082 agggtcacctgcgccgaacataacacaagggaaacttagtgctccacggatattgcggat 2141 Query: 2371 tctcaaagttgctaactatgtggttgagaagcttg 2405 || |||||| |||||||||||||| ||||| |||| Sbjct: 2142 tcacaaagtagctaactatgtggtcgagaaacttg 2176 Score = 165 bits (83), Expect = 1e-36 Identities = 166/193 (86%), Gaps = 3/193 (1%) Strand = Plus / Plus Query: 2471 tcagctctagatagttcttcacggcttggactaaagccatggcaaaagctgaaaccttca 2530 ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 2245 tcagcgctagatagttcttcacggcttggactaaaaccatggcaaaaattgaaaccttct 2304 Query: 2531 gttgagatattgtgcaacaaccagcaggttctgtcacctgagatgagtttggcaacggtg 2590 || ||||||||||| |||| | |||||| || |||| || ||||| ||||| || ||| Sbjct: 2305 gtagagatattgtgtaacagc---caggttttggcacccgaaatgagcttggccacagtg 2361 Query: 2591 cggacatatatttggaagaagccggaggatttgattcttaattacagagtggtccaatca 2650 ||| | ||| | ||||||||||| ||||||||||||||||| |||| ||||||||| ||| Sbjct: 2362 cgggcttatgtctggaagaagccagaggatttgattcttaactacaaagtggtccagtca 2421 Query: 2651 agataattgcaac 2663 |||| |||||||| Sbjct: 2422 agatgattgcaac 2434 Score = 46.1 bits (23), Expect = 0.76 Identities = 50/58 (86%), Gaps = 2/58 (3%) Strand = Plus / Plus Query: 2878 catagcacaggtgtaatg--ctcagctggctaccaggcttgtatatctagagatttgg 2933 |||||||||||||||||| ||| |||||||||| ||||||| || ||| ||||||| Sbjct: 2647 catagcacaggtgtaatgatctctactggctaccaagcttgtaaatttagggatttgg 2704
>dbj|AK112045.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C06, full insert sequence Length = 1551 Score = 724 bits (365), Expect = 0.0 Identities = 692/801 (86%), Gaps = 5/801 (0%) Strand = Plus / Plus Query: 1605 acaaagagccatctttcactattcctggagttccagctatagttcaacatgagatcatga 1664 ||||||| ||||||| | |||||||||||||||||| ||| ||| ||||||||| ||| Sbjct: 114 acaaagaaccatcttcaattattcctggagttccagcaataactcagcatgagatcctga 173 Query: 1665 ataatagaaggcatgtcctgacaaaggatactgttggttctgtcaaattatgggagatta 1724 |||||||||| ||||| |||| |||||||||| ||||||||||||||| |||||||||| Sbjct: 174 ataatagaagacatgtattgacgaaggatactgctggttctgtcaaattgtgggagatta 233 Query: 1725 ctcgaggagctgttattgaagattttggcaaggtttcgtttgatgataagaaaaaggagt 1784 |||||||||||||||||||||| |||||||||||||| ||||| ||||||||||| |||| Sbjct: 234 ctcgaggagctgttattgaagactttggcaaggtttcttttgaggataagaaaaaagagt 293 Query: 1785 tgtttgagatggttagcatacctgcatggttcaccatggacgctcgattggggtgcctgt 1844 ||||||||||| ||||||||| ||||| |||||||| ||||||||||| ||||||| Sbjct: 294 tgtttgagatg-----catacctgcctggtttaccatggatgctcgattgggatgcctgt 348 Query: 1845 ctgttcacctggatactccacaatgcttttctgcagaaatatatgcggttgatttgaatg 1904 |||| ||||||||||| || |||||||||||||| ||||||||||| ||||| || || | Sbjct: 349 ctgtccacctggatacacctcaatgcttttctgcggaaatatatgcagttgacttaaacg 408 Query: 1905 ttactggagcacaggaagatcttaagattaatttggctcatgagactcttcgtggtttgt 1964 || | ||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 409 ttgcaggagcacaggaagatcttaagattaatttggctcaggagactctccgtggtttgt 468 Query: 1965 tagttcattggagtaaacgaaggccaaaaccaggcccacacagcttgtccaatggtgatt 2024 ||||||||||||||||| || || | | | ||| ||||| ||||||| |||||||| Sbjct: 469 tagttcattggagtaaaaaaaagcagagatctggctcacacggcttgtcaaatggtgaca 528 Query: 2025 cttcaatagggaaagatgtatcattgaaaaatttaccccatccaagatccgacgttgatg 2084 |||||| ||| ||||||||||| ||||||||||| |||||||||||||| || ||||||| Sbjct: 529 cttcaacaggaaaagatgtatccttgaaaaatttgccccatccaagatctgaggttgatg 588 Query: 2085 atggaagcgaaaaccatgcaaataatgtacttccgtcgtttgagttctccacggtttcac 2144 |||| ||||| ||||||| | | | ||||| || |||||||| ||||| ||||| | Sbjct: 589 atggggctgaaaatcatgcaagtcagatgcttccctcatttgagttttccacagtttcgc 648 Query: 2145 ctccatcaattatcacggaaagttctagtggagggccttggagaaagagaattaccgatt 2204 |||||||||| ||||| ||| |||| ||||||||||||||||||||||||||||| |||| Sbjct: 649 ctccatcaatcatcacagaaggttcaagtggagggccttggagaaagagaattacagatt 708 Query: 2205 tggatggaaccgaggatgatttgccatggtggtgtgtagactgtgctgagaacggtcgat 2264 | |||||||||||| ||| | ||||||||| ||| ||||||| |||| | ||||| Sbjct: 709 tagatggaaccgagagcgatatcccatggtggattgtggactgtgttgagcataatcgat 768 Query: 2265 ttccaaaagagaacacaaagtgtggcttttatttgcatccggccgaaggctcacctgcac 2324 ||||||||||||| ||||||||||| || || |||||||| || ||||| |||||||||| Sbjct: 769 ttccaaaagagaatacaaagtgtggattctacttgcatcctgctgaagggtcacctgcac 828 Query: 2325 caaatataacacaagggaaactcagtgctccacggatattgcgagttctcaaagttgcta 2384 | || ||||||||||||||||| |||||||||||||||||||| ||| |||||| |||| Sbjct: 829 cgaacataacacaagggaaacttagtgctccacggatattgcggattcacaaagtagcta 888 Query: 2385 actatgtggttgagaagcttg 2405 |||||||||| ||||| |||| Sbjct: 889 actatgtggtcgagaaacttg 909 Score = 165 bits (83), Expect = 1e-36 Identities = 166/193 (86%), Gaps = 3/193 (1%) Strand = Plus / Plus Query: 2471 tcagctctagatagttcttcacggcttggactaaagccatggcaaaagctgaaaccttca 2530 ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 978 tcagcgctagatagttcttcacggcttggactaaaaccatggcaaaaattgaaaccttct 1037 Query: 2531 gttgagatattgtgcaacaaccagcaggttctgtcacctgagatgagtttggcaacggtg 2590 || ||||||||||| |||| | |||||| || |||| || ||||| ||||| || ||| Sbjct: 1038 gtagagatattgtgtaacagc---caggttttggcacccgaaatgagcttggccacagtg 1094 Query: 2591 cggacatatatttggaagaagccggaggatttgattcttaattacagagtggtccaatca 2650 ||| | ||| | ||||||||||| ||||||||||||||||| |||| ||||||||| ||| Sbjct: 1095 cgggcttatgtctggaagaagccagaggatttgattcttaactacaaagtggtccagtca 1154 Query: 2651 agataattgcaac 2663 |||| |||||||| Sbjct: 1155 agatgattgcaac 1167 Score = 46.1 bits (23), Expect = 0.76 Identities = 50/58 (86%), Gaps = 2/58 (3%) Strand = Plus / Plus Query: 2878 catagcacaggtgtaatg--ctcagctggctaccaggcttgtatatctagagatttgg 2933 |||||||||||||||||| ||| |||||||||| ||||||| || ||| ||||||| Sbjct: 1380 catagcacaggtgtaatgatctcttctggctaccaagcttgtaaatttagggatttgg 1437
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 278 bits (140), Expect = 1e-70 Identities = 257/296 (86%) Strand = Plus / Minus Query: 809 agcaatattgtagcctccggtggccttggtggtgaggtcttcatatgggatcttgatgct 868 ||||||||||| ||||| ||||||||||| ||||||||||| |||||||| |||||| || Sbjct: 3313591 agcaatattgttgcctctggtggccttggcggtgaggtctttatatgggaccttgattct 3313532 Query: 869 gctattgctcctatagccaaatctgtagatgcaaaagaggatgaggttcctaaaggaaac 928 || |||||||| | ||||||||||||||||||||||||||||| | |||||| |||||| Sbjct: 3313531 tctcttgctcctgtggccaaatctgtagatgcaaaagaggatgaagctcctaatggaaac 3313472 Query: 929 tctggacctgctttgtcaaccttgtgcaatgtaagttctagtggcaacattgtttctacc 988 ||||| ||||||||| |||||||||||||||||| |||||| ||||| ||| ||| ||| Sbjct: 3313471 tctgggcctgctttgacaaccttgtgcaatgtaaattctagcagcaaccttgcttccacc 3313412 Query: 989 aacggaaaatcacatgggtacagtcctattgctgccaaaggtcacaaggattcagtttat 1048 || || ||||||||||||||||||| || |||||||||||||||| |||||||||||| Sbjct: 3313411 aatgggcaatcacatgggtacagtccaatcactgccaaaggtcacaaagattcagtttat 3313352 Query: 1049 gcattggatatgaatgatacagggacgttgcttgtgtctggtggtactgaaaaggt 1104 ||||||| |||| ||| ||||| | ||||| |||||||||||||||||||| Sbjct: 3313351 gcattggccatgagtgacacaggaaacacacttgtctctggtggtactgaaaaggt 3313296 Score = 264 bits (133), Expect = 2e-66 Identities = 301/357 (84%) Strand = Plus / Minus Query: 1929 agattaatttggctcatgagactcttcgtggtttgttagttcattggagtaaacgaaggc 1988 |||||||||||||||| |||||||| ||||||||||||||||||||||||||| || || Sbjct: 3308884 agattaatttggctcaggagactctccgtggtttgttagttcattggagtaaaaaaaagc 3308825 Query: 1989 caaaaccaggcccacacagcttgtccaatggtgattcttcaatagggaaagatgtatcat 2048 | | | ||| ||||| ||||||| |||||||| |||||| ||| ||||||||||| | Sbjct: 3308824 agagatctggctcacacggcttgtcaaatggtgacacttcaacaggaaaagatgtatcct 3308765 Query: 2049 tgaaaaatttaccccatccaagatccgacgttgatgatggaagcgaaaaccatgcaaata 2108 |||||||||| |||||||||||||| || ||||||||||| ||||| ||||||| | Sbjct: 3308764 tgaaaaatttgccccatccaagatctgaggttgatgatggggctgaaaatcatgcaagtc 3308705 Query: 2109 atgtacttccgtcgtttgagttctccacggtttcacctccatcaattatcacggaaagtt 2168 | | ||||| || |||||||| ||||| ||||| ||||||||||| ||||| ||| ||| Sbjct: 3308704 agatgcttccctcatttgagttttccacagtttcgcctccatcaatcatcacagaaggtt 3308645 Query: 2169 ctagtggagggccttggagaaagagaattaccgatttggatggaaccgaggatgatttgc 2228 | ||||||||||||||||||||||||||||| ||||| |||||||||||| ||| | | Sbjct: 3308644 caagtggagggccttggagaaagagaattacagatttagatggaaccgagagcgatatcc 3308585 Query: 2229 catggtggtgtgtagactgtgctgagaacggtcgatttccaaaagagaacacaaagt 2285 |||||||| ||| ||||||| |||| | |||||||||||||||||| ||||||| Sbjct: 3308584 catggtggattgtggactgtgttgagcataatcgatttccaaaagagaatacaaagt 3308528 Score = 172 bits (87), Expect = 5e-39 Identities = 183/215 (85%) Strand = Plus / Minus Query: 1382 cgagagagtgtcttactatgcacaaatgaacacccaattctacagttgtccttgcaagat 1441 |||||||||||||| || |||||||| || ||||| |||||||| ||||||||||| ||| Sbjct: 3310503 cgagagagtgtcttgctctgcacaaacgagcacccgattctacaattgtccttgcaggat 3310444 Query: 1442 gatacaatatgggttgcaacaactgattcttctgtttatggatggccagctgaagggcaa 1501 |||| || |||||||||||||||||||||||||| |||||||| |||||||| ||| Sbjct: 3310443 gatatgatttgggttgcaacaactgattcttctgtgaatggatggaaagctgaagcgcat 3310384 Query: 1502 tccccacaaaaggtttttcaaaagggtggctcattcttagctgggaatttgtcattctca 1561 || | |||| |||| ||||| ||| |||||||||||||| |||||||||||||| Sbjct: 3310383 gaacccctaaagcttttccaaaaaggttcttcattcttagctggcaatttgtcattctcc 3310324 Query: 1562 agagcgagagcttctttagaaggatcagcacctgt 1596 || || || |||||||||||||||||||||||||| Sbjct: 3310323 agggcaagggcttctttagaaggatcagcacctgt 3310289 Score = 168 bits (85), Expect = 8e-38 Identities = 142/161 (88%) Strand = Plus / Minus Query: 495 agcattgtgctggaatcaactgcttgtcatacctgaatgcttctgcttctggtacaagtg 554 ||||||||||||| |||||||||||||||||||| ||||| ||| |||||||||| |||| Sbjct: 3314440 agcattgtgctgggatcaactgcttgtcatacctaaatgcctctacttctggtacgagtg 3314381 Query: 555 attatctttttactgggagtcgtgatggtaccttgaagagatgggaataccaaaacgggg 614 ||||||||||||| |||||||| ||||||||||||||||| |||||| |||| || | Sbjct: 3314380 attatctttttaccgggagtcgggatggtaccttgaagaggtgggaaccaaaaaatggag 3314321 Query: 615 atgcaaacttttcagcaacctttgagtcacatgttgattgg 655 |||| ||| |||||||| ||||||||||||||||||||| Sbjct: 3314320 tcgcaagcttctcagcaacttttgagtcacatgttgattgg 3314280 Score = 167 bits (84), Expect = 3e-37 Identities = 123/136 (90%) Strand = Plus / Minus Query: 1795 ggttagcatacctgcatggttcaccatggacgctcgattggggtgcctgtctgttcacct 1854 ||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||| ||||| Sbjct: 3309275 ggttagcatacctgcctggtttaccatggatgctcgattgggatgcctgtctgtccacct 3309216 Query: 1855 ggatactccacaatgcttttctgcagaaatatatgcggttgatttgaatgttactggagc 1914 |||||| || |||||||||||||||||||||||||| ||||| || || ||| | ||||| Sbjct: 3309215 ggatacacctcaatgcttttctgcagaaatatatgcagttgacttaaacgttgcaggagc 3309156 Query: 1915 acaggaagatcttaag 1930 |||||||||||||||| Sbjct: 3309155 acaggaagatcttaag 3309140 Score = 139 bits (70), Expect = 7e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 1101 aggttgttcgtgtttgggatcccaggacaggttctaagaacatgaaattgagagggcaca 1160 |||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 3313161 aggttgttcgcgtttgggatcccaggactggttcaaagaaaatgaaattgagagggcaca 3313102 Query: 1161 ctgacaatatcagggctttgcttattgattctactggaaggt 1202 ||||||||||||||||||| ||| ||||| ||||||| |||| Sbjct: 3313101 ctgacaatatcagggctttacttcttgatcctactggcaggt 3313060 Score = 137 bits (69), Expect = 3e-28 Identities = 96/105 (91%) Strand = Plus / Minus Query: 392 ctttcaatgcatcgtgtcgggagtgctggaaacacggccggttcaagtcgaccgagaaag 451 ||||||||||||||||| || |||||||| |||||||| ||||||||||||||||||||| Sbjct: 3314661 ctttcaatgcatcgtgttggaagtgctggtaacacggcaggttcaagtcgaccgagaaag 3314602 Query: 452 gagaaacgcttcacatatgtgctcaatgatgctgataataaaaag 496 ||||| ||||| ||||||||||| ||||| |||||||| |||||| Sbjct: 3314601 gagaagcgctttacatatgtgctgaatgacgctgataacaaaaag 3314557 Score = 131 bits (66), Expect = 2e-26 Identities = 105/118 (88%) Strand = Plus / Minus Query: 1239 tatgggatctaggacagcagcgctgtgtgcattcttatgccgttcacactgattcggttt 1298 |||||||||| ||||||||||| ||| | ||||||||||| || || |||||||| || | Sbjct: 3310720 tatgggatctgggacagcagcgatgtattcattcttatgctgtgcatactgattcagtct 3310661 Query: 1299 gggcgcttgcaagcaccccttcatttggtcatgtttatagcggtggaagagatcagtc 1356 |||||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||| Sbjct: 3310660 gggcgcttgcaagcactccttcgtttagtcatgtttatagtggtggaagagatcagtc 3310603 Score = 117 bits (59), Expect = 3e-22 Identities = 68/71 (95%) Strand = Plus / Minus Query: 1689 aggatactgttggttctgtcaaattatgggagattactcgaggagctgttattgaagatt 1748 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 3309654 aggatactgctggttctgtcaaattgtgggagattactcgaggagctgttattgaagact 3309595 Query: 1749 ttggcaaggtt 1759 ||||||||||| Sbjct: 3309594 ttggcaaggtt 3309584 Score = 103 bits (52), Expect = 4e-18 Identities = 76/84 (90%) Strand = Plus / Minus Query: 2471 tcagctctagatagttcttcacggcttggactaaagccatggcaaaagctgaaaccttca 2530 ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 3305666 tcagcgctagatagttcttcacggcttggactaaaaccatggcaaaaattgaaaccttct 3305607 Query: 2531 gttgagatattgtgcaacaaccag 2554 || ||||||||||| |||| |||| Sbjct: 3305606 gtagagatattgtgtaacagccag 3305583 Score = 95.6 bits (48), Expect = 9e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 2284 gtgtggcttttatttgcatccggccgaaggctcacctgcaccaaatataacacaagggaa 2343 |||||| || || |||||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 3307347 gtgtggattctacttgcatcctgctgaagggtcacctgcaccgaacataacacaagggaa 3307288 Query: 2344 actcagtgctccacggatattgcg 2367 ||| |||||||||||||||||||| Sbjct: 3307287 acttagtgctccacggatattgcg 3307264 Score = 95.6 bits (48), Expect = 9e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 717 aggtgtggaattgcttagcagatggtgcttgtaccaagactcttcgtcagcactctgatt 776 ||||||||||||| ||| |||||||||||||||||| |||||| || ||||| || |||| Sbjct: 3313771 aggtgtggaattgtttatcagatggtgcttgtaccaggactctccgccagcattccgatt 3313712 Query: 777 atgtgatatgtcttgctgctgctgaaaa 804 ||||||| ||||||||||| ||||||| Sbjct: 3313711 atgtgatttgtcttgctgcatctgaaaa 3313684 Score = 95.6 bits (48), Expect = 9e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 657 ttaacgatgccattattgttggccaaaatcttgtttcctgttcctcagacaccacattaa 716 |||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 3313903 ttaatgatgccattattgttggccaaaatcttgtttcctgttcctcagataccactctaa 3313844 Query: 717 aggt 720 |||| Sbjct: 3313843 aggt 3313840 Score = 93.7 bits (47), Expect = 4e-15 Identities = 95/111 (85%) Strand = Plus / Minus Query: 2553 agcaggttctgtcacctgagatgagtttggcaacggtgcggacatatatttggaagaagc 2612 |||||||| || |||| || ||||| ||||| || |||||| | ||| | |||||||||| Sbjct: 3304844 agcaggttttggcacccgaaatgagcttggccacagtgcgggcttatgtctggaagaagc 3304785 Query: 2613 cggaggatttgattcttaattacagagtggtccaatcaagataattgcaac 2663 | ||||||||||||||||| |||| ||||||||| ||||||| |||||||| Sbjct: 3304784 cagaggatttgattcttaactacaaagtggtccagtcaagatgattgcaac 3304734 Score = 71.9 bits (36), Expect = 1e-08 Identities = 66/76 (86%) Strand = Plus / Minus Query: 1605 acaaagagccatctttcactattcctggagttccagctatagttcaacatgagatcatga 1664 ||||||| ||||||| | |||||||||||||||||| ||| ||| ||||||||| ||| Sbjct: 3309824 acaaagaaccatcttcaattattcctggagttccagcaataactcagcatgagatcctga 3309765 Query: 1665 ataatagaaggcatgt 1680 |||||||||| ||||| Sbjct: 3309764 ataatagaagacatgt 3309749 Score = 61.9 bits (31), Expect = 1e-05 Identities = 40/43 (93%) Strand = Plus / Minus Query: 1755 aggtttcgtttgatgataagaaaaaggagttgtttgagatggt 1797 ||||||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 3309394 aggtttcttttgaggataagaaaaaagagttgtttgagatggt 3309352 Score = 60.0 bits (30), Expect = 5e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 1199 aggtattgtctatcaggctcatctgactcaatgataag 1236 ||||||||||| |||||||||||||| ||||||||||| Sbjct: 3310891 aggtattgtctttcaggctcatctgattcaatgataag 3310854 Score = 46.1 bits (23), Expect = 0.76 Identities = 50/58 (86%), Gaps = 2/58 (3%) Strand = Plus / Minus Query: 2878 catagcacaggtgtaatg--ctcagctggctaccaggcttgtatatctagagatttgg 2933 |||||||||||||||||| ||| |||||||||| ||||||| || ||| ||||||| Sbjct: 3304521 catagcacaggtgtaatgatctcttctggctaccaagcttgtaaatttagggatttgg 3304464
>emb|AL713936.4|CNS07YPH Oryza sativa chromosome 12, . BAC OJ1057_G11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109081 Score = 278 bits (140), Expect = 1e-70 Identities = 257/296 (86%) Strand = Plus / Minus Query: 809 agcaatattgtagcctccggtggccttggtggtgaggtcttcatatgggatcttgatgct 868 ||||||||||| ||||| ||||||||||| ||||||||||| |||||||| |||||| || Sbjct: 103977 agcaatattgttgcctctggtggccttggcggtgaggtctttatatgggaccttgattct 103918 Query: 869 gctattgctcctatagccaaatctgtagatgcaaaagaggatgaggttcctaaaggaaac 928 || |||||||| | ||||||||||||||||||||||||||||| | |||||| |||||| Sbjct: 103917 tctcttgctcctgtggccaaatctgtagatgcaaaagaggatgaagctcctaatggaaac 103858 Query: 929 tctggacctgctttgtcaaccttgtgcaatgtaagttctagtggcaacattgtttctacc 988 ||||| ||||||||| |||||||||||||||||| |||||| ||||| ||| ||| ||| Sbjct: 103857 tctgggcctgctttgacaaccttgtgcaatgtaaattctagcagcaaccttgcttccacc 103798 Query: 989 aacggaaaatcacatgggtacagtcctattgctgccaaaggtcacaaggattcagtttat 1048 || || ||||||||||||||||||| || |||||||||||||||| |||||||||||| Sbjct: 103797 aatgggcaatcacatgggtacagtccaatcactgccaaaggtcacaaagattcagtttat 103738 Query: 1049 gcattggatatgaatgatacagggacgttgcttgtgtctggtggtactgaaaaggt 1104 ||||||| |||| ||| ||||| | ||||| |||||||||||||||||||| Sbjct: 103737 gcattggccatgagtgacacaggaaacacacttgtctctggtggtactgaaaaggt 103682 Score = 264 bits (133), Expect = 2e-66 Identities = 301/357 (84%) Strand = Plus / Minus Query: 1929 agattaatttggctcatgagactcttcgtggtttgttagttcattggagtaaacgaaggc 1988 |||||||||||||||| |||||||| ||||||||||||||||||||||||||| || || Sbjct: 99270 agattaatttggctcaggagactctccgtggtttgttagttcattggagtaaaaaaaagc 99211 Query: 1989 caaaaccaggcccacacagcttgtccaatggtgattcttcaatagggaaagatgtatcat 2048 | | | ||| ||||| ||||||| |||||||| |||||| ||| ||||||||||| | Sbjct: 99210 agagatctggctcacacggcttgtcaaatggtgacacttcaacaggaaaagatgtatcct 99151 Query: 2049 tgaaaaatttaccccatccaagatccgacgttgatgatggaagcgaaaaccatgcaaata 2108 |||||||||| |||||||||||||| || ||||||||||| ||||| ||||||| | Sbjct: 99150 tgaaaaatttgccccatccaagatctgaggttgatgatggggctgaaaatcatgcaagtc 99091 Query: 2109 atgtacttccgtcgtttgagttctccacggtttcacctccatcaattatcacggaaagtt 2168 | | ||||| || |||||||| ||||| ||||| ||||||||||| ||||| ||| ||| Sbjct: 99090 agatgcttccctcatttgagttttccacagtttcgcctccatcaatcatcacagaaggtt 99031 Query: 2169 ctagtggagggccttggagaaagagaattaccgatttggatggaaccgaggatgatttgc 2228 | ||||||||||||||||||||||||||||| ||||| |||||||||||| ||| | | Sbjct: 99030 caagtggagggccttggagaaagagaattacagatttagatggaaccgagagcgatatcc 98971 Query: 2229 catggtggtgtgtagactgtgctgagaacggtcgatttccaaaagagaacacaaagt 2285 |||||||| ||| ||||||| |||| | |||||||||||||||||| ||||||| Sbjct: 98970 catggtggattgtggactgtgttgagcataatcgatttccaaaagagaatacaaagt 98914 Score = 172 bits (87), Expect = 5e-39 Identities = 183/215 (85%) Strand = Plus / Minus Query: 1382 cgagagagtgtcttactatgcacaaatgaacacccaattctacagttgtccttgcaagat 1441 |||||||||||||| || |||||||| || ||||| |||||||| ||||||||||| ||| Sbjct: 100889 cgagagagtgtcttgctctgcacaaacgagcacccgattctacaattgtccttgcaggat 100830 Query: 1442 gatacaatatgggttgcaacaactgattcttctgtttatggatggccagctgaagggcaa 1501 |||| || |||||||||||||||||||||||||| |||||||| |||||||| ||| Sbjct: 100829 gatatgatttgggttgcaacaactgattcttctgtgaatggatggaaagctgaagcgcat 100770 Query: 1502 tccccacaaaaggtttttcaaaagggtggctcattcttagctgggaatttgtcattctca 1561 || | |||| |||| ||||| ||| |||||||||||||| |||||||||||||| Sbjct: 100769 gaacccctaaagcttttccaaaaaggttcttcattcttagctggcaatttgtcattctcc 100710 Query: 1562 agagcgagagcttctttagaaggatcagcacctgt 1596 || || || |||||||||||||||||||||||||| Sbjct: 100709 agggcaagggcttctttagaaggatcagcacctgt 100675 Score = 168 bits (85), Expect = 8e-38 Identities = 142/161 (88%) Strand = Plus / Minus Query: 495 agcattgtgctggaatcaactgcttgtcatacctgaatgcttctgcttctggtacaagtg 554 ||||||||||||| |||||||||||||||||||| ||||| ||| |||||||||| |||| Sbjct: 104826 agcattgtgctgggatcaactgcttgtcatacctaaatgcctctacttctggtacgagtg 104767 Query: 555 attatctttttactgggagtcgtgatggtaccttgaagagatgggaataccaaaacgggg 614 ||||||||||||| |||||||| ||||||||||||||||| |||||| |||| || | Sbjct: 104766 attatctttttaccgggagtcgggatggtaccttgaagaggtgggaaccaaaaaatggag 104707 Query: 615 atgcaaacttttcagcaacctttgagtcacatgttgattgg 655 |||| ||| |||||||| ||||||||||||||||||||| Sbjct: 104706 tcgcaagcttctcagcaacttttgagtcacatgttgattgg 104666 Score = 167 bits (84), Expect = 3e-37 Identities = 123/136 (90%) Strand = Plus / Minus Query: 1795 ggttagcatacctgcatggttcaccatggacgctcgattggggtgcctgtctgttcacct 1854 ||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||| ||||| Sbjct: 99661 ggttagcatacctgcctggtttaccatggatgctcgattgggatgcctgtctgtccacct 99602 Query: 1855 ggatactccacaatgcttttctgcagaaatatatgcggttgatttgaatgttactggagc 1914 |||||| || |||||||||||||||||||||||||| ||||| || || ||| | ||||| Sbjct: 99601 ggatacacctcaatgcttttctgcagaaatatatgcagttgacttaaacgttgcaggagc 99542 Query: 1915 acaggaagatcttaag 1930 |||||||||||||||| Sbjct: 99541 acaggaagatcttaag 99526 Score = 139 bits (70), Expect = 7e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 1101 aggttgttcgtgtttgggatcccaggacaggttctaagaacatgaaattgagagggcaca 1160 |||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 103547 aggttgttcgcgtttgggatcccaggactggttcaaagaaaatgaaattgagagggcaca 103488 Query: 1161 ctgacaatatcagggctttgcttattgattctactggaaggt 1202 ||||||||||||||||||| ||| ||||| ||||||| |||| Sbjct: 103487 ctgacaatatcagggctttacttcttgatcctactggcaggt 103446 Score = 137 bits (69), Expect = 3e-28 Identities = 96/105 (91%) Strand = Plus / Minus Query: 392 ctttcaatgcatcgtgtcgggagtgctggaaacacggccggttcaagtcgaccgagaaag 451 ||||||||||||||||| || |||||||| |||||||| ||||||||||||||||||||| Sbjct: 105047 ctttcaatgcatcgtgttggaagtgctggtaacacggcaggttcaagtcgaccgagaaag 104988 Query: 452 gagaaacgcttcacatatgtgctcaatgatgctgataataaaaag 496 ||||| ||||| ||||||||||| ||||| |||||||| |||||| Sbjct: 104987 gagaagcgctttacatatgtgctgaatgacgctgataacaaaaag 104943 Score = 131 bits (66), Expect = 2e-26 Identities = 105/118 (88%) Strand = Plus / Minus Query: 1239 tatgggatctaggacagcagcgctgtgtgcattcttatgccgttcacactgattcggttt 1298 |||||||||| ||||||||||| ||| | ||||||||||| || || |||||||| || | Sbjct: 101106 tatgggatctgggacagcagcgatgtattcattcttatgctgtgcatactgattcagtct 101047 Query: 1299 gggcgcttgcaagcaccccttcatttggtcatgtttatagcggtggaagagatcagtc 1356 |||||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||| Sbjct: 101046 gggcgcttgcaagcactccttcgtttagtcatgtttatagtggtggaagagatcagtc 100989 Score = 117 bits (59), Expect = 3e-22 Identities = 68/71 (95%) Strand = Plus / Minus Query: 1689 aggatactgttggttctgtcaaattatgggagattactcgaggagctgttattgaagatt 1748 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 100040 aggatactgctggttctgtcaaattgtgggagattactcgaggagctgttattgaagact 99981 Query: 1749 ttggcaaggtt 1759 ||||||||||| Sbjct: 99980 ttggcaaggtt 99970 Score = 103 bits (52), Expect = 4e-18 Identities = 76/84 (90%) Strand = Plus / Minus Query: 2471 tcagctctagatagttcttcacggcttggactaaagccatggcaaaagctgaaaccttca 2530 ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 96052 tcagcgctagatagttcttcacggcttggactaaaaccatggcaaaaattgaaaccttct 95993 Query: 2531 gttgagatattgtgcaacaaccag 2554 || ||||||||||| |||| |||| Sbjct: 95992 gtagagatattgtgtaacagccag 95969 Score = 95.6 bits (48), Expect = 9e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 2284 gtgtggcttttatttgcatccggccgaaggctcacctgcaccaaatataacacaagggaa 2343 |||||| || || |||||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 97733 gtgtggattctacttgcatcctgctgaagggtcacctgcaccgaacataacacaagggaa 97674 Query: 2344 actcagtgctccacggatattgcg 2367 ||| |||||||||||||||||||| Sbjct: 97673 acttagtgctccacggatattgcg 97650 Score = 95.6 bits (48), Expect = 9e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 717 aggtgtggaattgcttagcagatggtgcttgtaccaagactcttcgtcagcactctgatt 776 ||||||||||||| ||| |||||||||||||||||| |||||| || ||||| || |||| Sbjct: 104157 aggtgtggaattgtttatcagatggtgcttgtaccaggactctccgccagcattccgatt 104098 Query: 777 atgtgatatgtcttgctgctgctgaaaa 804 ||||||| ||||||||||| ||||||| Sbjct: 104097 atgtgatttgtcttgctgcatctgaaaa 104070 Score = 95.6 bits (48), Expect = 9e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 657 ttaacgatgccattattgttggccaaaatcttgtttcctgttcctcagacaccacattaa 716 |||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 104289 ttaatgatgccattattgttggccaaaatcttgtttcctgttcctcagataccactctaa 104230 Query: 717 aggt 720 |||| Sbjct: 104229 aggt 104226 Score = 93.7 bits (47), Expect = 4e-15 Identities = 95/111 (85%) Strand = Plus / Minus Query: 2553 agcaggttctgtcacctgagatgagtttggcaacggtgcggacatatatttggaagaagc 2612 |||||||| || |||| || ||||| ||||| || |||||| | ||| | |||||||||| Sbjct: 95230 agcaggttttggcacccgaaatgagcttggccacagtgcgggcttatgtctggaagaagc 95171 Query: 2613 cggaggatttgattcttaattacagagtggtccaatcaagataattgcaac 2663 | ||||||||||||||||| |||| ||||||||| ||||||| |||||||| Sbjct: 95170 cagaggatttgattcttaactacaaagtggtccagtcaagatgattgcaac 95120 Score = 71.9 bits (36), Expect = 1e-08 Identities = 66/76 (86%) Strand = Plus / Minus Query: 1605 acaaagagccatctttcactattcctggagttccagctatagttcaacatgagatcatga 1664 ||||||| ||||||| | |||||||||||||||||| ||| ||| ||||||||| ||| Sbjct: 100210 acaaagaaccatcttcaattattcctggagttccagcaataactcagcatgagatcctga 100151 Query: 1665 ataatagaaggcatgt 1680 |||||||||| ||||| Sbjct: 100150 ataatagaagacatgt 100135 Score = 61.9 bits (31), Expect = 1e-05 Identities = 40/43 (93%) Strand = Plus / Minus Query: 1755 aggtttcgtttgatgataagaaaaaggagttgtttgagatggt 1797 ||||||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 99780 aggtttcttttgaggataagaaaaaagagttgtttgagatggt 99738 Score = 60.0 bits (30), Expect = 5e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 1199 aggtattgtctatcaggctcatctgactcaatgataag 1236 ||||||||||| |||||||||||||| ||||||||||| Sbjct: 101277 aggtattgtctttcaggctcatctgattcaatgataag 101240 Score = 46.1 bits (23), Expect = 0.76 Identities = 50/58 (86%), Gaps = 2/58 (3%) Strand = Plus / Minus Query: 2878 catagcacaggtgtaatg--ctcagctggctaccaggcttgtatatctagagatttgg 2933 |||||||||||||||||| ||| |||||||||| ||||||| || ||| ||||||| Sbjct: 94907 catagcacaggtgtaatgatctcttctggctaccaagcttgtaaatttagggatttgg 94850
>gb|AY109830.1| Zea mays CL2951_1 mRNA sequence Length = 989 Score = 159 bits (80), Expect = 7e-35 Identities = 146/168 (86%) Strand = Plus / Minus Query: 2260 tcgatttccaaaagagaacacaaagtgtggcttttatttgcatccggccgaaggctcacc 2319 ||||| |||||| ||||| ||||| || || |||||||| || || || |||||||| || Sbjct: 821 tcgatatccaaaggagaatacaaaatgcgggttttatttacaccctgctgaaggctcgcc 762 Query: 2320 tgcaccaaatataacacaagggaaactcagtgctccacggatattgcgagttctcaaagt 2379 ||||||||| ||||| |||||||| || ||||||||||||||||||||| ||| ||| || Sbjct: 761 tgcaccaaacataactcaagggaagcttagtgctccacggatattgcgaattcacaaggt 702 Query: 2380 tgctaactatgtggttgagaagcttgttcttgagaaaccattggatgg 2427 |||||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 701 agctaactatgtggttgagaaactcgttcttgacaaaccattggatgg 654 Score = 113 bits (57), Expect = 4e-21 Identities = 81/89 (91%) Strand = Plus / Minus Query: 2159 acggaaagttctagtggagggccttggagaaagagaattaccgatttggatggaaccgag 2218 |||||| |||||||||||||||| |||||||||||||||||||||||||||| ||| ||| Sbjct: 922 acggaaggttctagtggagggccatggagaaagagaattaccgatttggatgtaactgag 863 Query: 2219 gatgatttgccatggtggtgtgtagactg 2247 | |||| | |||||||||||||| ||||| Sbjct: 862 ggtgatcttccatggtggtgtgtggactg 834 Score = 93.7 bits (47), Expect = 4e-15 Identities = 98/116 (84%), Gaps = 3/116 (2%) Strand = Plus / Minus Query: 2532 ttgagatattgtgcaacaaccagcaggttctgtcacctgagatgagtttggcaacggtgc 2591 |||||||||||||||| |||||| ||||| ||||| |||||||||||||| || |||| Sbjct: 543 ttgagatattgtgcaataaccag---gttctatcaccagagatgagtttggctactgtgc 487 Query: 2592 ggacatatatttggaagaagccggaggatttgattcttaattacagagtggtccaa 2647 | |||||||| ||| ||| || |||||||||||| ||||||||||||||||| Sbjct: 486 gaacatatatatggnnnnngccagaagatttgattcttcattacagagtggtccaa 431 Score = 69.9 bits (35), Expect = 5e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 2471 tcagctctagatagttcttcacggcttggactaaagccatggc 2513 |||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 604 tcagttctagatagttcttcgcggcttggactaaagccatggc 562
>gb|BT018078.1| Zea mays clone EL01N0551H06.c mRNA sequence Length = 656 Score = 149 bits (75), Expect = 7e-32 Identities = 152/177 (85%), Gaps = 3/177 (1%) Strand = Plus / Plus Query: 2471 tcagctctagatagttcttcacggcttggactaaagccatggcaaaagctgaaaccttca 2530 |||| ||||||||||||||| |||||||||||||||||||||||||| || || | Sbjct: 47 tcagttctagatagttcttcgcggcttggactaaagccatggcaaaaaacaaagccatgt 106 Query: 2531 gttgagatattgtgcaacaaccagcaggttctgtcacctgagatgagtttggcaacggtg 2590 |||||||||||||||| |||||| ||||| ||||| |||||||||||||| || ||| Sbjct: 107 attgagatattgtgcaataaccag---gttctatcaccagagatgagtttggctactgtg 163 Query: 2591 cggacatatatttggaagaagccggaggatttgattcttaattacagagtggtccaa 2647 || |||||||| ||||| ||||| || |||||||||||| ||||||||||||||||| Sbjct: 164 cgaacatatatatggaaaaagccagaagatttgattcttcattacagagtggtccaa 220
>dbj|AK226843.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL08-13-E11 Length = 2927 Score = 137 bits (69), Expect = 3e-28 Identities = 345/437 (78%) Strand = Plus / Plus Query: 1025 aaaggtcacaaggattcagtttatgcattggatatgaatgatacagggacgttgcttgtg 1084 ||||| || ||||| || || ||||| |||| ||||||||||| || ||| |||| || Sbjct: 987 aaaggccataaggagtctgtgtatgctttggcgatgaatgataccggaacgatgctcgtt 1046 Query: 1085 tctggtggtactgaaaaggttgttcgtgtttgggatcccaggacaggttctaagaacatg 1144 |||||||| || ||||||||| | ||||| ||||| || || || ||||| |||| ||| Sbjct: 1047 tctggtggaacagaaaaggttttacgtgtctgggaccctagaaccggttcaaagagtatg 1106 Query: 1145 aaattgagagggcacactgacaatatcagggctttgcttattgattctactggaaggtat 1204 || |||||||||| || || ||| | || | ||||| | || || ||||| |||| | Sbjct: 1107 aagctgagagggcatacagataatgttagagtgctgcttctggactcaactggcaggttt 1166 Query: 1205 tgtctatcaggctcatctgactcaatgataagactatgggatctaggacagcagcgctgt 1264 || | || || || ||||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 1167 tgcttgtctgggtcgtctgattctatgataagactatgggatctaggtcagcagcgatgt 1226 Query: 1265 gtgcattcttatgccgttcacactgattcggtttgggcgcttgcaagcaccccttcattt 1324 | ||| | ||||| || || || ||||| ||||||||||||||| ||| ||| |||||| Sbjct: 1227 cttcatacctatgcggtgcatacagattctgtttgggcgcttgcatgcaacccatcattt 1286 Query: 1325 ggtcatgtttatagcggtggaagagatcagtccgtgtacctgacagacctctccacacga 1384 ||||||||||||||||||||||||| || | | ||| |||||||| | | ||| | Sbjct: 1287 agtcatgtttatagcggtggaagagaccaatgtttatacttgacagacttggcaacaagg 1346 Query: 1385 gagagtgtcttactatgcacaaatgaacacccaattctacagttgtccttgcaagatgat 1444 |||||||| || || ||||| || ||||| ||||||| ||| || | ||||||||| || Sbjct: 1347 gagagtgttttgctgtgcactaaggaacatccaattcaacaattagcgttgcaagataat 1406 Query: 1445 acaatatgggttgcaac 1461 | |||||||||||||| Sbjct: 1407 agtatatgggttgcaac 1423 Score = 50.1 bits (25), Expect = 0.049 Identities = 40/45 (88%) Strand = Plus / Plus Query: 827 ggtggccttggtggtgaggtcttcatatgggatcttgatgctgct 871 |||||||||||||| ||||| || ||||||||| |||| |||||| Sbjct: 792 ggtggccttggtggggaggtttttatatgggatattgaagctgct 836
>ref|NM_111381.2| Arabidopsis thaliana nucleotide binding (AT3G05090) mRNA, complete cds Length = 2966 Score = 137 bits (69), Expect = 3e-28 Identities = 345/437 (78%) Strand = Plus / Plus Query: 1025 aaaggtcacaaggattcagtttatgcattggatatgaatgatacagggacgttgcttgtg 1084 ||||| || ||||| || || ||||| |||| ||||||||||| || ||| |||| || Sbjct: 1020 aaaggccataaggagtctgtgtatgctttggcgatgaatgataccggaacgatgctcgtt 1079 Query: 1085 tctggtggtactgaaaaggttgttcgtgtttgggatcccaggacaggttctaagaacatg 1144 |||||||| || ||||||||| | ||||| ||||| || || || ||||| |||| ||| Sbjct: 1080 tctggtggaacagaaaaggttttacgtgtctgggaccctagaaccggttcaaagagtatg 1139 Query: 1145 aaattgagagggcacactgacaatatcagggctttgcttattgattctactggaaggtat 1204 || |||||||||| || || ||| | || | ||||| | || || ||||| |||| | Sbjct: 1140 aagctgagagggcatacagataatgttagagtgctgcttctggactcaactggcaggttt 1199 Query: 1205 tgtctatcaggctcatctgactcaatgataagactatgggatctaggacagcagcgctgt 1264 || | || || || ||||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 1200 tgcttgtctgggtcgtctgattctatgataagactatgggatctaggtcagcagcgatgt 1259 Query: 1265 gtgcattcttatgccgttcacactgattcggtttgggcgcttgcaagcaccccttcattt 1324 | ||| | ||||| || || || ||||| ||||||||||||||| ||| ||| |||||| Sbjct: 1260 cttcatacctatgcggtgcatacagattctgtttgggcgcttgcatgcaacccatcattt 1319 Query: 1325 ggtcatgtttatagcggtggaagagatcagtccgtgtacctgacagacctctccacacga 1384 ||||||||||||||||||||||||| || | | ||| |||||||| | | ||| | Sbjct: 1320 agtcatgtttatagcggtggaagagaccaatgtttatacttgacagacttggcaacaagg 1379 Query: 1385 gagagtgtcttactatgcacaaatgaacacccaattctacagttgtccttgcaagatgat 1444 |||||||| || || ||||| || ||||| ||||||| ||| || | ||||||||| || Sbjct: 1380 gagagtgttttgctgtgcactaaggaacatccaattcaacaattagcgttgcaagataat 1439 Query: 1445 acaatatgggttgcaac 1461 | |||||||||||||| Sbjct: 1440 agtatatgggttgcaac 1456 Score = 50.1 bits (25), Expect = 0.049 Identities = 40/45 (88%) Strand = Plus / Plus Query: 827 ggtggccttggtggtgaggtcttcatatgggatcttgatgctgct 871 |||||||||||||| ||||| || ||||||||| |||| |||||| Sbjct: 825 ggtggccttggtggggaggtttttatatgggatattgaagctgct 869
>ref|NM_180185.2| Arabidopsis thaliana nucleotide binding (AT3G05090) mRNA, complete cds Length = 3018 Score = 137 bits (69), Expect = 3e-28 Identities = 345/437 (78%) Strand = Plus / Plus Query: 1025 aaaggtcacaaggattcagtttatgcattggatatgaatgatacagggacgttgcttgtg 1084 ||||| || ||||| || || ||||| |||| ||||||||||| || ||| |||| || Sbjct: 1020 aaaggccataaggagtctgtgtatgctttggcgatgaatgataccggaacgatgctcgtt 1079 Query: 1085 tctggtggtactgaaaaggttgttcgtgtttgggatcccaggacaggttctaagaacatg 1144 |||||||| || ||||||||| | ||||| ||||| || || || ||||| |||| ||| Sbjct: 1080 tctggtggaacagaaaaggttttacgtgtctgggaccctagaaccggttcaaagagtatg 1139 Query: 1145 aaattgagagggcacactgacaatatcagggctttgcttattgattctactggaaggtat 1204 || |||||||||| || || ||| | || | ||||| | || || ||||| |||| | Sbjct: 1140 aagctgagagggcatacagataatgttagagtgctgcttctggactcaactggcaggttt 1199 Query: 1205 tgtctatcaggctcatctgactcaatgataagactatgggatctaggacagcagcgctgt 1264 || | || || || ||||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 1200 tgcttgtctgggtcgtctgattctatgataagactatgggatctaggtcagcagcgatgt 1259 Query: 1265 gtgcattcttatgccgttcacactgattcggtttgggcgcttgcaagcaccccttcattt 1324 | ||| | ||||| || || || ||||| ||||||||||||||| ||| ||| |||||| Sbjct: 1260 cttcatacctatgcggtgcatacagattctgtttgggcgcttgcatgcaacccatcattt 1319 Query: 1325 ggtcatgtttatagcggtggaagagatcagtccgtgtacctgacagacctctccacacga 1384 ||||||||||||||||||||||||| || | | ||| |||||||| | | ||| | Sbjct: 1320 agtcatgtttatagcggtggaagagaccaatgtttatacttgacagacttggcaacaagg 1379 Query: 1385 gagagtgtcttactatgcacaaatgaacacccaattctacagttgtccttgcaagatgat 1444 |||||||| || || ||||| || ||||| ||||||| ||| || | ||||||||| || Sbjct: 1380 gagagtgttttgctgtgcactaaggaacatccaattcaacaattagcgttgcaagataat 1439 Query: 1445 acaatatgggttgcaac 1461 | |||||||||||||| Sbjct: 1440 agtatatgggttgcaac 1456 Score = 50.1 bits (25), Expect = 0.049 Identities = 40/45 (88%) Strand = Plus / Plus Query: 827 ggtggccttggtggtgaggtcttcatatgggatcttgatgctgct 871 |||||||||||||| ||||| || ||||||||| |||| |||||| Sbjct: 825 ggtggccttggtggggaggtttttatatgggatattgaagctgct 869
>gb|BT000631.1| Arabidopsis thaliana hypothetical protein (At3g05090/T12H1_5) mRNA, complete cds Length = 2262 Score = 137 bits (69), Expect = 3e-28 Identities = 345/437 (78%) Strand = Plus / Plus Query: 1025 aaaggtcacaaggattcagtttatgcattggatatgaatgatacagggacgttgcttgtg 1084 ||||| || ||||| || || ||||| |||| ||||||||||| || ||| |||| || Sbjct: 628 aaaggccataaggagtctgtgtatgctttggcgatgaatgataccggaacgatgctcgtt 687 Query: 1085 tctggtggtactgaaaaggttgttcgtgtttgggatcccaggacaggttctaagaacatg 1144 |||||||| || ||||||||| | ||||| ||||| || || || ||||| |||| ||| Sbjct: 688 tctggtggaacagaaaaggttttacgtgtctgggaccctagaaccggttcaaagagtatg 747 Query: 1145 aaattgagagggcacactgacaatatcagggctttgcttattgattctactggaaggtat 1204 || |||||||||| || || ||| | || | ||||| | || || ||||| |||| | Sbjct: 748 aagctgagagggcatacagataatgttagagtgctgcttctggactcaactggcaggttt 807 Query: 1205 tgtctatcaggctcatctgactcaatgataagactatgggatctaggacagcagcgctgt 1264 || | || || || ||||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 808 tgcttgtctgggtcgtctgattctatgataagactatgggatctaggtcagcagcgatgt 867 Query: 1265 gtgcattcttatgccgttcacactgattcggtttgggcgcttgcaagcaccccttcattt 1324 | ||| | ||||| || || || ||||| ||||||||||||||| ||| ||| |||||| Sbjct: 868 cttcatacctatgcggtgcatacagattctgtttgggcgcttgcatgcaacccatcattt 927 Query: 1325 ggtcatgtttatagcggtggaagagatcagtccgtgtacctgacagacctctccacacga 1384 ||||||||||||||||||||||||| || | | ||| |||||||| | | ||| | Sbjct: 928 agtcatgtttatagcggtggaagagaccaatgtttatacttgacagacttggcaacaagg 987 Query: 1385 gagagtgtcttactatgcacaaatgaacacccaattctacagttgtccttgcaagatgat 1444 |||||||| || || ||||| || ||||| ||||||| ||| || | ||||||||| || Sbjct: 988 gagagtgttttgctgtgcactaaggaacatccaattcaacaattagcgttgcaagataat 1047 Query: 1445 acaatatgggttgcaac 1461 | |||||||||||||| Sbjct: 1048 agtatatgggttgcaac 1064 Score = 50.1 bits (25), Expect = 0.049 Identities = 40/45 (88%) Strand = Plus / Plus Query: 827 ggtggccttggtggtgaggtcttcatatgggatcttgatgctgct 871 |||||||||||||| ||||| || ||||||||| |||| |||||| Sbjct: 433 ggtggccttggtggggaggtttttatatgggatattgaagctgct 477
>gb|AY142674.1| Arabidopsis thaliana unknown protein (At3g05090) mRNA, complete cds Length = 2293 Score = 137 bits (69), Expect = 3e-28 Identities = 345/437 (78%) Strand = Plus / Plus Query: 1025 aaaggtcacaaggattcagtttatgcattggatatgaatgatacagggacgttgcttgtg 1084 ||||| || ||||| || || ||||| |||| ||||||||||| || ||| |||| || Sbjct: 628 aaaggccataaggagtctgtgtatgctttggcgatgaatgataccggaacgatgctcgtt 687 Query: 1085 tctggtggtactgaaaaggttgttcgtgtttgggatcccaggacaggttctaagaacatg 1144 |||||||| || ||||||||| | ||||| ||||| || || || ||||| |||| ||| Sbjct: 688 tctggtggaacagaaaaggttttacgtgtctgggaccctagaaccggttcaaagagtatg 747 Query: 1145 aaattgagagggcacactgacaatatcagggctttgcttattgattctactggaaggtat 1204 || |||||||||| || || ||| | || | ||||| | || || ||||| |||| | Sbjct: 748 aagctgagagggcatacagataatgttagagtgctgcttctggactcaactggcaggttt 807 Query: 1205 tgtctatcaggctcatctgactcaatgataagactatgggatctaggacagcagcgctgt 1264 || | || || || ||||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 808 tgcttgtctgggtcgtctgattctatgataagactatgggatctaggtcagcagcgatgt 867 Query: 1265 gtgcattcttatgccgttcacactgattcggtttgggcgcttgcaagcaccccttcattt 1324 | ||| | ||||| || || || ||||| ||||||||||||||| ||| ||| |||||| Sbjct: 868 cttcatacctatgcggtgcatacagattctgtttgggcgcttgcatgcaacccatcattt 927 Query: 1325 ggtcatgtttatagcggtggaagagatcagtccgtgtacctgacagacctctccacacga 1384 ||||||||||||||||||||||||| || | | ||| |||||||| | | ||| | Sbjct: 928 agtcatgtttatagcggtggaagagaccaatgtttatacttgacagacttggcaacaagg 987 Query: 1385 gagagtgtcttactatgcacaaatgaacacccaattctacagttgtccttgcaagatgat 1444 |||||||| || || ||||| || ||||| ||||||| ||| || | ||||||||| || Sbjct: 988 gagagtgttttgctgtgcactaaggaacatccaattcaacaattagcgttgcaagataat 1047 Query: 1445 acaatatgggttgcaac 1461 | |||||||||||||| Sbjct: 1048 agtatatgggttgcaac 1064 Score = 50.1 bits (25), Expect = 0.049 Identities = 40/45 (88%) Strand = Plus / Plus Query: 827 ggtggccttggtggtgaggtcttcatatgggatcttgatgctgct 871 |||||||||||||| ||||| || ||||||||| |||| |||||| Sbjct: 433 ggtggccttggtggggaggtttttatatgggatattgaagctgct 477
>gb|AY056292.1| Arabidopsis thaliana unknown protein (At3g05090) mRNA, complete cds Length = 2899 Score = 137 bits (69), Expect = 3e-28 Identities = 345/437 (78%) Strand = Plus / Plus Query: 1025 aaaggtcacaaggattcagtttatgcattggatatgaatgatacagggacgttgcttgtg 1084 ||||| || ||||| || || ||||| |||| ||||||||||| || ||| |||| || Sbjct: 937 aaaggccataaggagtctgtgtatgctttggcgatgaatgataccggaacgatgctcgtt 996 Query: 1085 tctggtggtactgaaaaggttgttcgtgtttgggatcccaggacaggttctaagaacatg 1144 |||||||| || ||||||||| | ||||| ||||| || || || ||||| |||| ||| Sbjct: 997 tctggtggaacagaaaaggttttacgtgtctgggaccctagaaccggttcaaagagtatg 1056 Query: 1145 aaattgagagggcacactgacaatatcagggctttgcttattgattctactggaaggtat 1204 || |||||||||| || || ||| | || | ||||| | || || ||||| |||| | Sbjct: 1057 aagctgagagggcatacagataatgttagagtgctgcttctggactcaactggcaggttt 1116 Query: 1205 tgtctatcaggctcatctgactcaatgataagactatgggatctaggacagcagcgctgt 1264 || | || || || ||||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 1117 tgcttgtctgggtcgtctgattctatgataagactatgggatctaggtcagcagcgatgt 1176 Query: 1265 gtgcattcttatgccgttcacactgattcggtttgggcgcttgcaagcaccccttcattt 1324 | ||| | ||||| || || || ||||| ||||||||||||||| ||| ||| |||||| Sbjct: 1177 cttcatacctatgcggtgcatacagattctgtttgggcgcttgcatgcaacccatcattt 1236 Query: 1325 ggtcatgtttatagcggtggaagagatcagtccgtgtacctgacagacctctccacacga 1384 ||||||||||||||||||||||||| || | | ||| |||||||| | | ||| | Sbjct: 1237 agtcatgtttatagcggtggaagagaccaatgtttatacttgacagacttggcaacaagg 1296 Query: 1385 gagagtgtcttactatgcacaaatgaacacccaattctacagttgtccttgcaagatgat 1444 |||||||| || || ||||| || ||||| ||||||| ||| || | ||||||||| || Sbjct: 1297 gagagtgttttgctgtgcactaaggaacatccaattcaacaattagcgttgcaagataat 1356 Query: 1445 acaatatgggttgcaac 1461 | |||||||||||||| Sbjct: 1357 agtatatgggttgcaac 1373 Score = 50.1 bits (25), Expect = 0.049 Identities = 40/45 (88%) Strand = Plus / Plus Query: 827 ggtggccttggtggtgaggtcttcatatgggatcttgatgctgct 871 |||||||||||||| ||||| || ||||||||| |||| |||||| Sbjct: 742 ggtggccttggtggggaggtttttatatgggatattgaagctgct 786
>gb|AY127022.1| Arabidopsis thaliana AT3g05090/T12H1_5 mRNA, complete cds Length = 2910 Score = 137 bits (69), Expect = 3e-28 Identities = 345/437 (78%) Strand = Plus / Plus Query: 1025 aaaggtcacaaggattcagtttatgcattggatatgaatgatacagggacgttgcttgtg 1084 ||||| || ||||| || || ||||| |||| ||||||||||| || ||| |||| || Sbjct: 980 aaaggccataaggagtctgtgtatgctttggcgatgaatgataccggaacgatgctcgtt 1039 Query: 1085 tctggtggtactgaaaaggttgttcgtgtttgggatcccaggacaggttctaagaacatg 1144 |||||||| || ||||||||| | ||||| ||||| || || || ||||| |||| ||| Sbjct: 1040 tctggtggaacagaaaaggttttacgtgtctgggaccctagaaccggttcaaagagtatg 1099 Query: 1145 aaattgagagggcacactgacaatatcagggctttgcttattgattctactggaaggtat 1204 || |||||||||| || || ||| | || | ||||| | || || ||||| |||| | Sbjct: 1100 aagctgagagggcatacagataatgttagagtgctgcttctggactcaactggcaggttt 1159 Query: 1205 tgtctatcaggctcatctgactcaatgataagactatgggatctaggacagcagcgctgt 1264 || | || || || ||||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 1160 tgcttgtctgggtcgtctgattctatgataagactatgggatctaggtcagcagcgatgt 1219 Query: 1265 gtgcattcttatgccgttcacactgattcggtttgggcgcttgcaagcaccccttcattt 1324 | ||| | ||||| || || || ||||| ||||||||||||||| ||| ||| |||||| Sbjct: 1220 cttcatacctatgcggtgcatacagattctgtttgggcgcttgcatgcaacccatcattt 1279 Query: 1325 ggtcatgtttatagcggtggaagagatcagtccgtgtacctgacagacctctccacacga 1384 ||||||||||||||||||||||||| || | | ||| |||||||| | | ||| | Sbjct: 1280 agtcatgtttatagcggtggaagagaccaatgtttatacttgacagacttggcaacaagg 1339 Query: 1385 gagagtgtcttactatgcacaaatgaacacccaattctacagttgtccttgcaagatgat 1444 |||||||| || || ||||| || ||||| ||||||| ||| || | ||||||||| || Sbjct: 1340 gagagtgttttgctgtgcactaaggaacatccaattcaacaattagcgttgcaagataat 1399 Query: 1445 acaatatgggttgcaac 1461 | |||||||||||||| Sbjct: 1400 agtatatgggttgcaac 1416 Score = 50.1 bits (25), Expect = 0.049 Identities = 40/45 (88%) Strand = Plus / Plus Query: 827 ggtggccttggtggtgaggtcttcatatgggatcttgatgctgct 871 |||||||||||||| ||||| || ||||||||| |||| |||||| Sbjct: 785 ggtggccttggtggggaggtttttatatgggatattgaagctgct 829
>gb|BT013837.1| Lycopersicon esculentum clone 132794F, mRNA sequence Length = 3116 Score = 119 bits (60), Expect = 6e-23 Identities = 219/272 (80%) Strand = Plus / Plus Query: 1079 cttgtgtctggtggtactgaaaaggttgttcgtgtttgggatcccaggacaggttctaag 1138 ||||| |||||||||||||| |||||||| || |||||||| || || || ||||| ||| Sbjct: 919 cttgtttctggtggtactgagaaggttgtgcgcgtttgggacccaagaactggttccaag 978 Query: 1139 aacatgaaattgagagggcacactgacaatatcagggctttgcttattgattctactgga 1198 | |||||| | | ||| || || || ||||| |||||| | || || || || ||||| Sbjct: 979 accatgaagctaaaaggtcatacagataatattagggctcttctgatagactccactggc 1038 Query: 1199 aggtattgtctatcaggctcatctgactcaatgataagactatgggatctaggacagcag 1258 |||| || |||| || || ||||| || ||||| ||||||||||||||||| |||||| Sbjct: 1039 aggttctgcatatctggatcctctgattccatgattagactatgggatctaggtcagcag 1098 Query: 1259 cgctgtgtgcattcttatgccgttcacactgattcggtttgggcgcttgcaagcacccct 1318 || || |||||||||||||| || || || ||||| || ||| | ||||| ||||| ||| Sbjct: 1099 cgttgcgtgcattcttatgctgtgcatacggattctgtatggtcacttgctagcactcct 1158 Query: 1319 tcatttggtcatgtttatagcggtggaagaga 1350 | ||| ||||||||||||| ||||||||||| Sbjct: 1159 acgtttagtcatgtttatagtggtggaagaga 1190 Score = 67.9 bits (34), Expect = 2e-07 Identities = 193/246 (78%) Strand = Plus / Plus Query: 1573 ttctttagaaggatcagcacctgtgcctgtatacaaagagccatctttcactattcctgg 1632 |||| |||||||||| ||||||| ||||| || ||||| |||||| | | |||||||| Sbjct: 1413 ttctctagaaggatctacacctgttcctgtttataaagaaccatctcttagcattcctgg 1472 Query: 1633 agttccagctatagttcaacatgagatcatgaataatagaaggcatgtcctgacaaagga 1692 | ||||| ||||| || |||||||| |||| || ||||| ||||||||||| ||||| Sbjct: 1473 aactccaggaatagtgcagcatgagattttgaacaacagaagacatgtcctgactaagga 1532 Query: 1693 tactgttggttctgtcaaattatgggagattactcgaggagctgttattgaagattttgg 1752 ||||| ||| | || || || |||||||| ||| |||| |||| ||| | | | ||| Sbjct: 1533 tactgctggaacagtgaagttgtgggagatcactagaggcactgtgattcacaactatgg 1592 Query: 1753 caaggtttcgtttgatgataagaaaaaggagttgtttgagatggttagcatacctgcatg 1812 ||||||| ||||| | |||||| | || | ||||||||||| ||||| |||||||| Sbjct: 1593 agaggtttcatttgagaagaagaaagaagaactttttgagatggtgagcatccctgcatg 1652 Query: 1813 gttcac 1818 |||||| Sbjct: 1653 gttcac 1658 Score = 61.9 bits (31), Expect = 1e-05 Identities = 61/71 (85%) Strand = Plus / Plus Query: 800 gaaaagaatagcaatattgtagcctccggtggccttggtggtgaggtcttcatatgggat 859 ||||| ||||||||| || | || || | ||| |||||||||||||| |||||||||||| Sbjct: 631 gaaaaaaatagcaatgttattgcatctgctggtcttggtggtgaggttttcatatgggat 690 Query: 860 cttgatgctgc 870 ||||| ||||| Sbjct: 691 cttgaagctgc 701
>gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC T12H1 genomic sequence, complete sequence Length = 140064 Score = 111 bits (56), Expect = 2e-20 Identities = 101/116 (87%) Strand = Plus / Minus Query: 1235 agactatgggatctaggacagcagcgctgtgtgcattcttatgccgttcacactgattcg 1294 ||||||||||||||||| |||||||| ||| | ||| | ||||| || || || ||||| Sbjct: 17031 agactatgggatctaggtcagcagcgatgtcttcatacctatgcggtgcatacagattct 16972 Query: 1295 gtttgggcgcttgcaagcaccccttcatttggtcatgtttatagcggtggaagaga 1350 ||||||||||||||| ||| ||| |||||| ||||||||||||||||||||||||| Sbjct: 16971 gtttgggcgcttgcatgcaacccatcatttagtcatgtttatagcggtggaagaga 16916 Score = 50.1 bits (25), Expect = 0.049 Identities = 40/45 (88%) Strand = Plus / Minus Query: 827 ggtggccttggtggtgaggtcttcatatgggatcttgatgctgct 871 |||||||||||||| ||||| || ||||||||| |||| |||||| Sbjct: 17741 ggtggccttggtggggaggtttttatatgggatattgaagctgct 17697
>gb|BT019122.1| Zea mays clone Contig734.F mRNA sequence Length = 942 Score = 109 bits (55), Expect = 6e-20 Identities = 88/99 (88%) Strand = Plus / Plus Query: 2556 aggttctgtcacctgagatgagtttggcaacggtgcggacatatatttggaagaagccgg 2615 ||||||| || || |||||||||||||| || ||||| |||||||| ||||||||||||| Sbjct: 161 aggttctatccccagagatgagtttggctaccgtgcgaacatatatatggaagaagccgg 220 Query: 2616 aggatttgattcttaattacagagtggtccaatcaagat 2654 | |||||||||||| |||| |||||||||||||| |||| Sbjct: 221 aagatttgattcttcattatagagtggtccaatcgagat 259 Score = 69.9 bits (35), Expect = 5e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 2471 tcagctctagatagttcttcacggcttggactaaagccatggcaaaa 2517 ||||| |||||||||||||| ||||||||||||||||| |||||||| Sbjct: 97 tcagcgctagatagttcttcccggcttggactaaagccctggcaaaa 143
>gb|AC148345.3| Medicago truncatula chromosome 7 BAC clone mth2-14a16, complete sequence Length = 105328 Score = 91.7 bits (46), Expect = 1e-14 Identities = 94/110 (85%) Strand = Plus / Minus Query: 1241 tgggatctaggacagcagcgctgtgtgcattcttatgccgttcacactgattcggtttgg 1300 |||||| |||| |||||| | ||||| ||||||||||| ||||| || ||||| |||||| Sbjct: 6186 tgggatataggtcagcagagatgtgttcattcttatgctgttcatacagattctgtttgg 6127 Query: 1301 gcgcttgcaagcaccccttcatttggtcatgtttatagcggtggaagaga 1350 || ||||| |||||||| ||||| ||||||||||||| ||||| ||||| Sbjct: 6126 gcacttgccagcaccccaacatttagtcatgtttatagtggtggcagaga 6077 Score = 56.0 bits (28), Expect = 8e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 1004 gggtacagtcctattgctgccaaaggtcacaaggattcagtttatgcattgg 1055 ||||||| ||| |||||||||||||| || ||||| || ||||||||||||| Sbjct: 7935 gggtacattccaattgctgccaaaggccataaggagtctgtttatgcattgg 7884 Score = 52.0 bits (26), Expect = 0.012 Identities = 44/50 (88%) Strand = Plus / Minus Query: 1448 atatgggttgcaacaactgattcttctgtttatggatggccagctgaagg 1497 |||||||||||| |||| |||||||| ||| || ||||||| |||||||| Sbjct: 5844 atatgggttgcatcaacagattcttcagttcatagatggcctgctgaagg 5795 Score = 52.0 bits (26), Expect = 0.012 Identities = 35/38 (92%) Strand = Plus / Minus Query: 809 agcaatattgtagcctccggtggccttggtggtgaggt 846 ||||||||||| ||||| |||||||||||||| ||||| Sbjct: 8142 agcaatattgttgcctctggtggccttggtggggaggt 8105 Score = 44.1 bits (22), Expect = 3.0 Identities = 37/42 (88%) Strand = Plus / Minus Query: 2504 aagccatggcaaaagctgaaaccttcagttgagatattgtgc 2545 ||||| ||||||||||| | ||||||| |||| ||||||||| Sbjct: 1915 aagccttggcaaaagcttagaccttcaattgaaatattgtgc 1874
>gb|AC189329.1| Brassica rapa subsp. pekinensis clone KBrB037C07, complete sequence Length = 103109 Score = 79.8 bits (40), Expect = 5e-11 Identities = 97/116 (83%) Strand = Plus / Minus Query: 1235 agactatgggatctaggacagcagcgctgtgtgcattcttatgccgttcacactgattcg 1294 ||||| |||||||| || |||||| | ||| | ||| | ||||| || ||||| ||||| Sbjct: 52648 agactttgggatcttggtcagcagagatgtcttcatacctatgcggtgcacacagattct 52589 Query: 1295 gtttgggcgcttgcaagcaccccttcatttggtcatgtttatagcggtggaagaga 1350 || |||||||||||| |||| || |||||| |||||||||||||||||||||||| Sbjct: 52588 gtgtgggcgcttgcatgcactccatcatttactcatgtttatagcggtggaagaga 52533 Score = 46.1 bits (23), Expect = 0.76 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1433 ttgcaagatgatacaatatgggttgcaacaa 1463 ||||||||||||| |||||||||||||||| Sbjct: 52370 ttgcaagatgatagtatatgggttgcaacaa 52340
>dbj|AP004904.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT10C05, TM0062, complete sequence Length = 81367 Score = 67.9 bits (34), Expect = 2e-07 Identities = 91/110 (82%) Strand = Plus / Plus Query: 1241 tgggatctaggacagcagcgctgtgtgcattcttatgccgttcacactgattcggtttgg 1300 |||||||| || ||||| || || ||||||||||||| |||||||| ||||| || ||| Sbjct: 13705 tgggatcttggtcagcaacgttgcttgcattcttatgcagttcacacagattctgtgtgg 13764 Query: 1301 gcgcttgcaagcaccccttcatttggtcatgtttatagcggtggaagaga 1350 || ||||| ||||| | ||||| ||||||||||||| ||||| ||||| Sbjct: 13765 gctcttgctagcacttcaacatttagtcatgtttatagtggtggtagaga 13814 Score = 67.9 bits (34), Expect = 2e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 809 agcaatattgtagcctccggtggccttggtggtgaggtcttcatatgggatcttgatgct 868 ||||||||||| ||||| |||||||| ||||| ||||| ||| ||||||||||||| ||| Sbjct: 43438 agcaatattgttgcctctggtggcctcggtggagaggttttcgtatgggatcttgaagct 43497 Query: 869 gc 870 || Sbjct: 43498 gc 43499 Score = 67.9 bits (34), Expect = 2e-07 Identities = 91/110 (82%) Strand = Plus / Plus Query: 1241 tgggatctaggacagcagcgctgtgtgcattcttatgccgttcacactgattcggtttgg 1300 |||||||| || ||||| || || |||||||||||||||||||||| ||||| || ||| Sbjct: 47479 tgggatcttggtcagcaacgttgcttgcattcttatgccgttcacacagattctgtgtgg 47538 Query: 1301 gcgcttgcaagcaccccttcatttggtcatgtttatagcggtggaagaga 1350 || ||||| |||| | ||||| ||||||||||||| ||||| ||||| Sbjct: 47539 gctcttgcttgcacttcaacatttagtcatgtttatagtggtggtagaga 47588 Score = 52.0 bits (26), Expect = 0.012 Identities = 83/102 (81%) Strand = Plus / Plus Query: 1101 aggttgttcgtgtttgggatcccaggacaggttctaagaacatgaaattgagagggcaca 1160 ||||||| |||||||||||||| || | || || |||| |||||| | | |||||| | Sbjct: 12515 aggttgtgcgtgtttgggatccaagatctggatcaaagactatgaaactaaaagggcata 12574 Query: 1161 ctgacaatatcagggctttgcttattgattctactggaaggt 1202 | || || ||||||||||||||| | ||||||||||| |||| Sbjct: 12575 cggataacatcagggctttgcttctggattctactggcaggt 12616 Score = 52.0 bits (26), Expect = 0.012 Identities = 83/102 (81%) Strand = Plus / Plus Query: 1101 aggttgttcgtgtttgggatcccaggacaggttctaagaacatgaaattgagagggcaca 1160 ||||||| |||||||||||||| || | || || |||| |||||| | | |||||| | Sbjct: 43861 aggttgtgcgtgtttgggatccaagatctggatcaaagactatgaaactaaaagggcata 43920 Query: 1161 ctgacaatatcagggctttgcttattgattctactggaaggt 1202 | || || ||||||||||||||| | ||||||||||| |||| Sbjct: 43921 cagataacatcagggctttgcttctggattctactggcaggt 43962 Score = 50.1 bits (25), Expect = 0.049 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1433 ttgcaagatgatacaatatgggttgcaacaactgattcttctgtttatggatggccagct 1492 ||||| ||||||| |||||||||||| |||| |||||||| ||| || ||| ||| ||| Sbjct: 47820 ttgcatgatgatagcatatgggttgcatcaacagattcttcagttcatagattgcctgct 47879 Query: 1493 gaagg 1497 ||||| Sbjct: 47880 gaagg 47884 Score = 50.1 bits (25), Expect = 0.049 Identities = 40/45 (88%) Strand = Plus / Plus Query: 2510 tggcaaaagctgaaaccttcagttgagatattgtgcaacaaccag 2554 ||||||||| | | |||||| ||||||||||||||||||||||| Sbjct: 52482 tggcaaaagattagaccttctattgagatattgtgcaacaaccag 52526 Score = 48.1 bits (24), Expect = 0.19 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1664 aataatagaaggcatgtcctgacaaagg 1691 |||||||| ||||||||||||||||||| Sbjct: 48337 aataataggaggcatgtcctgacaaagg 48364 Score = 46.1 bits (23), Expect = 0.76 Identities = 50/59 (84%) Strand = Plus / Plus Query: 1007 tacagtcctattgctgccaaaggtcacaaggattcagtttatgcattggatatgaatga 1065 |||| ||| |||||||| ||||| || ||||| || ||||||||||||| |||||||| Sbjct: 12302 tacattccaattgctgctaaaggccataaggaatctgtttatgcattggcaatgaatga 12360 Score = 46.1 bits (23), Expect = 0.76 Identities = 50/59 (84%) Strand = Plus / Plus Query: 1007 tacagtcctattgctgccaaaggtcacaaggattcagtttatgcattggatatgaatga 1065 |||| ||| |||||||| ||||| || ||||| || ||||||||||||| |||||||| Sbjct: 43648 tacattccaattgctgctaaaggccataaggaatctgtttatgcattggcaatgaatga 43706
>ref|XM_001189690.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC755387 (LOC755387), partial mRNA Length = 605 Score = 46.1 bits (23), Expect = 0.76 Identities = 26/27 (96%) Strand = Plus / Minus Query: 208 agttcctcctcctcctcctaatctgcc 234 ||||||||||||||||||| ||||||| Sbjct: 577 agttcctcctcctcctcctcatctgcc 551
>ref|XM_001188137.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC760382 (LOC760382), partial mRNA Length = 605 Score = 46.1 bits (23), Expect = 0.76 Identities = 26/27 (96%) Strand = Plus / Minus Query: 208 agttcctcctcctcctcctaatctgcc 234 ||||||||||||||||||| ||||||| Sbjct: 577 agttcctcctcctcctcctcatctgcc 551
>ref|XM_001157218.1| PREDICTED: Pan troglodytes hypothetical protein LOC747504 (LOC747504), mRNA Length = 880 Score = 46.1 bits (23), Expect = 0.76 Identities = 38/43 (88%) Strand = Plus / Minus Query: 212 cctcctcctcctcctaatctgccgctgccgtctcctcccgctc 254 ||||||||||||||| || ||||| |||| |||||||||||| Sbjct: 67 cctcctcctcctcctcctcggccgccgccgcctcctcccgctc 25
>gb|AC105179.6| Homo sapiens chromosome 11, clone RP11-124M12, complete sequence Length = 171683 Score = 46.1 bits (23), Expect = 0.76 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2819 cctcctctgtaaagtttttctat 2841 ||||||||||||||||||||||| Sbjct: 13414 cctcctctgtaaagtttttctat 13392
>emb|AL158211.29| Human DNA sequence from clone RP11-573G6 on chromosome 10 Contains a ribosomal protein L31 (RPL31) pseudogene, the BUP gene for BUP protein, the BMI1 gene for B lymphoma Mo-MLV insertion region (mouse) (MGC12685), the 5' end of the SPAG6 gene for sperm associated antigen 6 (pf16, MGC26276, Repro-SA-1,DKFZp434I153), the 5' end of a novel gene and seven CpG islands, complete sequence Length = 138094 Score = 46.1 bits (23), Expect = 0.76 Identities = 38/43 (88%) Strand = Plus / Minus Query: 212 cctcctcctcctcctaatctgccgctgccgtctcctcccgctc 254 ||||||||||||||| || ||||| |||| |||||||||||| Sbjct: 76416 cctcctcctcctcctcctcggccgccgccgcctcctcccgctc 76374
>gb|AC068329.8| Homo sapiens chromosome 11, clone RP11-82N10, complete sequence Length = 185347 Score = 46.1 bits (23), Expect = 0.76 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2819 cctcctctgtaaagtttttctat 2841 ||||||||||||||||||||||| Sbjct: 152178 cctcctctgtaaagtttttctat 152156
>ref|NM_005180.5| Homo sapiens B lymphoma Mo-MLV insertion region (mouse) (BMI1), mRNA gb|BC011652.2| Homo sapiens B lymphoma Mo-MLV insertion region (mouse), mRNA (cDNA clone MGC:12685 IMAGE:4138748), complete cds Length = 3251 Score = 46.1 bits (23), Expect = 0.76 Identities = 38/43 (88%) Strand = Plus / Minus Query: 212 cctcctcctcctcctaatctgccgctgccgtctcctcccgctc 254 ||||||||||||||| || ||||| |||| |||||||||||| Sbjct: 199 cctcctcctcctcctcctcggccgccgccgcctcctcccgctc 157
>gb|L13689.1|HUMBMI1X Human prot-oncogene (BMI-1) mRNA, complete cds Length = 3203 Score = 46.1 bits (23), Expect = 0.76 Identities = 38/43 (88%) Strand = Plus / Minus Query: 212 cctcctcctcctcctaatctgccgctgccgtctcctcccgctc 254 ||||||||||||||| || ||||| |||| |||||||||||| Sbjct: 173 cctcctcctcctcctcctcggccgccgccgcctcctcccgctc 131
>gb|AC130801.16| Medicago truncatula clone mth2-12p19, complete sequence Length = 119328 Score = 44.1 bits (22), Expect = 3.0 Identities = 37/42 (88%) Strand = Plus / Plus Query: 2504 aagccatggcaaaagctgaaaccttcagttgagatattgtgc 2545 ||||| ||||||||||| | ||||||| |||| ||||||||| Sbjct: 2855 aagccttggcaaaagcttagaccttcaattgaaatattgtgc 2896
>gb|AC122685.9| Homo sapiens 12 BAC RP11-165I14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 106673 Score = 44.1 bits (22), Expect = 3.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2804 tacagcaacttaattcctcctctgta 2829 |||||||| ||||||||||||||||| Sbjct: 18903 tacagcaatttaattcctcctctgta 18928
>gb|AC105316.5| Homo sapiens BAC clone RP11-524B5 from 4, complete sequence Length = 148571 Score = 44.1 bits (22), Expect = 3.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1419 ttctacagttgtccttgcaagatgatacaatatgggtt 1456 |||||||| |||| |||||||||||| |||||||||| Sbjct: 85427 ttctacagatgtctttgcaagatgattgaatatgggtt 85464
>emb|AL355805.20| Human DNA sequence from clone RP11-29L10 on chromosome Xq21.1-21.33 Contains a ribosomal protein L6 (RPL6) pseudogene, complete sequence Length = 76507 Score = 44.1 bits (22), Expect = 3.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2856 caggcttctagtgagattgtatcata 2881 |||||||| ||||||||||||||||| Sbjct: 32889 caggcttccagtgagattgtatcata 32914 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 588,708,289 Number of extensions: 32293098 Number of successful extensions: 488914 Number of sequences better than 10.0: 32 Number of HSP's gapped: 488900 Number of HSP's successfully gapped: 130 Length of query: 3113 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 3090 Effective length of database: 18,503,978,556 Effective search space: 57177293738040 Effective search space used: 57177293738040 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
