ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf66l06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104181.1| Zea mays PCO060230 mRNA sequence Length = 1061 Score = 462 bits (233), Expect = e-126 Identities = 401/457 (87%) Strand = Plus / Plus Query: 145 cgatgacgctgggcagctccggcgccggatcgagcgtcgtcgttcctcggaacttcaggc 204 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 264 cgatgacgctgggtagctccggcgccggatcgagcgtcgtcgttcctcgaaacttcaggc 323 Query: 205 tgctagaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaa 264 | |||| ||||| ||||| || |||||||||||||| ||||| || || |||||||||| Sbjct: 324 tattagaggagctcgagcgtggagagaagggcattggtgatgggacagtgagctatggaa 383 Query: 265 tggatgatgctgatgacatatacatgcggtcatggactggcaccattattggtcctcaca 324 ||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 384 tggatgatgctgatgacatctacatgcggtcatggactggtaccatcattggccctcaca 443 Query: 325 atactgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctg 384 ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| || | Sbjct: 444 atactgtacatgagggtcgcatctaccagctgaagttgttttgtgacaaggactatccgg 503 Query: 385 agaaggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgaga 444 ||||| |||||||||| |||||||| ||||||||||||||| | || ||||||||||||| Sbjct: 504 agaagccaccatctgtcagattccactcaagaatcaacatgacatgcgttaatcacgaga 563 Query: 445 ccggggcggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaa 504 | || |||||| || | |||||| || ||||||| ||||||||||| || ||||| | Sbjct: 564 caggaatggttgatccaaggaagtttggtttgctagcgaactggcagcgggactacacga 623 Query: 505 tggagcatgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaagctag 564 ||||| | || | |||||||| |||||||| ||||| || | ||||| || ||| ||| Sbjct: 624 tggagaacatcctcacccagctcaagaaagagatggctgcctcgcagaatcgaaagttag 683 Query: 565 tgcagcctccagaagggacattcttctagcggagtgt 601 |||||||||||||||||||||||||||| || ||||| Sbjct: 684 tgcagcctccagaagggacattcttctaacgaagtgt 720
>ref|NM_001069339.1| Oryza sativa (japonica cultivar-group) Os09g0297100 (Os09g0297100) mRNA, complete cds Length = 831 Score = 460 bits (232), Expect = e-126 Identities = 403/460 (87%) Strand = Plus / Plus Query: 140 atcgacgatgacgctgggcagctccggcgccggatcgagcgtcgtcgttcctcggaactt 199 |||| ||||||||||||| |||||||||||||||||||||||||||||||| || ||||| Sbjct: 50 atcggcgatgacgctggggagctccggcgccggatcgagcgtcgtcgttccgcgaaactt 109 Query: 200 caggctgctagaagagcttgagcgcggggagaagggcattggagatggaactgtcagcta 259 |||| |||||||||||||||| || || || |||||||||||||||||||| || ||||| Sbjct: 110 caggttgctagaagagcttgaacgtggtgaaaagggcattggagatggaaccgtgagcta 169 Query: 260 tggaatggatgatgctgatgacatatacatgcggtcatggactggcaccattattggtcc 319 ||||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 170 tggaatggatgatgcagatgacatctacatgcggtcttggactggcaccatcattggtcc 229 Query: 320 tcacaatactgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggacta 379 || |||| ||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 230 acataatagtgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaaggacta 289 Query: 380 ccctgagaaggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatca 439 ||| |||||| |||||||||| | || |||||||||||||| ||| | ||||||||||| Sbjct: 290 cccagagaagccaccatctgtccggtttcattcaagaatcaatatgtcgtgtgttaatca 349 Query: 440 cgagaccggggcggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagta 499 ||||| || ||||||||| ||| |||||| |||| ||||||||||||||||| ||||| Sbjct: 350 tgagactggagcggttgactcgaggaagtttggtgttctagcaaactggcagcgcgagta 409 Query: 500 cacaatggagcatgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaa 559 ||| |||||| | || | |||||||| ||||| || |||||| | | ||||| ||||| Sbjct: 410 caccatggagactatccttacccagctcaagaaggagatggcaaccccgcagaatcgcaa 469 Query: 560 gctagtgcagcctccagaagggacattcttctagcggagt 599 | | ||||| |||||||||||||| ||||||||| ||||| Sbjct: 470 gttggtgcaacctccagaagggacgttcttctagaggagt 509
>dbj|AK104965.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C07, full insert sequence Length = 833 Score = 460 bits (232), Expect = e-126 Identities = 403/460 (87%) Strand = Plus / Plus Query: 140 atcgacgatgacgctgggcagctccggcgccggatcgagcgtcgtcgttcctcggaactt 199 |||| ||||||||||||| |||||||||||||||||||||||||||||||| || ||||| Sbjct: 52 atcggcgatgacgctggggagctccggcgccggatcgagcgtcgtcgttccgcgaaactt 111 Query: 200 caggctgctagaagagcttgagcgcggggagaagggcattggagatggaactgtcagcta 259 |||| |||||||||||||||| || || || |||||||||||||||||||| || ||||| Sbjct: 112 caggttgctagaagagcttgaacgtggtgaaaagggcattggagatggaaccgtgagcta 171 Query: 260 tggaatggatgatgctgatgacatatacatgcggtcatggactggcaccattattggtcc 319 ||||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 172 tggaatggatgatgcagatgacatctacatgcggtcttggactggcaccatcattggtcc 231 Query: 320 tcacaatactgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggacta 379 || |||| ||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 232 acataatagtgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaaggacta 291 Query: 380 ccctgagaaggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatca 439 ||| |||||| |||||||||| | || |||||||||||||| ||| | ||||||||||| Sbjct: 292 cccagagaagccaccatctgtccggtttcattcaagaatcaatatgtcgtgtgttaatca 351 Query: 440 cgagaccggggcggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagta 499 ||||| || ||||||||| ||| |||||| |||| ||||||||||||||||| ||||| Sbjct: 352 tgagactggagcggttgactcgaggaagtttggtgttctagcaaactggcagcgcgagta 411 Query: 500 cacaatggagcatgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaa 559 ||| |||||| | || | |||||||| ||||| || |||||| | | ||||| ||||| Sbjct: 412 caccatggagactatccttacccagctcaagaaggagatggcaaccccgcagaatcgcaa 471 Query: 560 gctagtgcagcctccagaagggacattcttctagcggagt 599 | | ||||| |||||||||||||| ||||||||| ||||| Sbjct: 472 gttggtgcaacctccagaagggacgttcttctagaggagt 511
>dbj|AK073729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033054B21, full insert sequence Length = 853 Score = 460 bits (232), Expect = e-126 Identities = 403/460 (87%) Strand = Plus / Plus Query: 140 atcgacgatgacgctgggcagctccggcgccggatcgagcgtcgtcgttcctcggaactt 199 |||| ||||||||||||| |||||||||||||||||||||||||||||||| || ||||| Sbjct: 103 atcggcgatgacgctggggagctccggcgccggatcgagcgtcgtcgttccgcgaaactt 162 Query: 200 caggctgctagaagagcttgagcgcggggagaagggcattggagatggaactgtcagcta 259 |||| |||||||||||||||| || || || |||||||||||||||||||| || ||||| Sbjct: 163 caggttgctagaagagcttgaacgtggtgaaaagggcattggagatggaaccgtgagcta 222 Query: 260 tggaatggatgatgctgatgacatatacatgcggtcatggactggcaccattattggtcc 319 ||||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 223 tggaatggatgatgcagatgacatctacatgcggtcttggactggcaccatcattggtcc 282 Query: 320 tcacaatactgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggacta 379 || |||| ||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 283 acataatagtgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaaggacta 342 Query: 380 ccctgagaaggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatca 439 ||| |||||| |||||||||| | || |||||||||||||| ||| | ||||||||||| Sbjct: 343 cccagagaagccaccatctgtccggtttcattcaagaatcaatatgtcgtgtgttaatca 402 Query: 440 cgagaccggggcggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagta 499 ||||| || ||||||||| ||| |||||| |||| ||||||||||||||||| ||||| Sbjct: 403 tgagactggagcggttgactcgaggaagtttggtgttctagcaaactggcagcgcgagta 462 Query: 500 cacaatggagcatgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaa 559 ||| |||||| | || | |||||||| ||||| || |||||| | | ||||| ||||| Sbjct: 463 caccatggagactatccttacccagctcaagaaggagatggcaaccccgcagaatcgcaa 522 Query: 560 gctagtgcagcctccagaagggacattcttctagcggagt 599 | | ||||| |||||||||||||| ||||||||| ||||| Sbjct: 523 gttggtgcaacctccagaagggacgttcttctagaggagt 562
>gb|DQ244159.1| Zea mays clone 2642 mRNA sequence Length = 792 Score = 454 bits (229), Expect = e-124 Identities = 400/457 (87%) Strand = Plus / Plus Query: 145 cgatgacgctgggcagctccggcgccggatcgagcgtcgtcgttcctcggaacttcaggc 204 ||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 83 cgatgacgctgggtagctccggcgccggatcgagcgtcgtcgttccccgaaacttcaggc 142 Query: 205 tgctagaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaa 264 | |||| ||||| ||||| || |||||||||||||| |||||||| || |||||||||| Sbjct: 143 tattagaggagctcgagcgtggagagaagggcattggtgatggaacagtgagctatggaa 202 Query: 265 tggatgatgctgatgacatatacatgcggtcatggactggcaccattattggtcctcaca 324 |||||||||| |||||||| |||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 203 tggatgatgccgatgacatctacatgcggtcatggactggtaccatcattggccctcaca 262 Query: 325 atactgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctg 384 ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| || | Sbjct: 263 atactgtacatgagggtcgcatctaccagctgaagttgttttgtgacaaggactatccgg 322 Query: 385 agaaggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgaga 444 ||||| |||||||||| |||||||| ||||||||||||||| | || ||||||||||||| Sbjct: 323 agaagccaccatctgtcagattccactcaagaatcaacatgacatgcgttaatcacgaga 382 Query: 445 ccggggcggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaa 504 | || |||||| || | |||||| || ||||||| ||||||||||| || ||||| | Sbjct: 383 caggaatggttgatccaaggaagtttggtttgctagcgaactggcagcgggactacacga 442 Query: 505 tggagcatgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaagctag 564 ||||| | || | |||||||| |||||||| ||||| || | ||||| || ||| ||| Sbjct: 443 tggagaacatcctcacccagctcaagaaagagatggctgcctcgcagaatcgaaagttag 502 Query: 565 tgcagcctccagaagggacattcttctagcggagtgt 601 |||||||||||||||||||||||||||| || ||||| Sbjct: 503 tgcagcctccagaagggacattcttctaacgaagtgt 539
>gb|BT017181.1| Zea mays clone EL01N0369E04.c mRNA sequence Length = 822 Score = 454 bits (229), Expect = e-124 Identities = 400/457 (87%) Strand = Plus / Plus Query: 145 cgatgacgctgggcagctccggcgccggatcgagcgtcgtcgttcctcggaacttcaggc 204 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 145 cgatgacgctgggtagctccggcgccggatcgagcgtcgtcgttcctcgaaacttcaggc 204 Query: 205 tgctagaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaa 264 | |||| ||||| ||||| || |||||||||||||| ||||| || || |||||||||| Sbjct: 205 tattagaggagctcgagcgtggagagaagggcattggtgatgggacagtgagctatggaa 264 Query: 265 tggatgatgctgatgacatatacatgcggtcatggactggcaccattattggtcctcaca 324 ||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 265 tggatgatgctgatgacatctacatgcggtcatggactggtaccatcattggccctcaca 324 Query: 325 atactgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctg 384 ||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||| || | Sbjct: 325 atactgtacatgagggtcgcatctaccagctgaagttgttttgtgacaaagactatccgg 384 Query: 385 agaaggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgaga 444 ||||| |||||||||| |||||||| ||||||||||||||| | || ||||||||||||| Sbjct: 385 agaagccaccatctgtcagattccactcaagaatcaacatgacatgcgttaatcacgaga 444 Query: 445 ccggggcggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaa 504 | || |||||| || | |||||| || ||||||| ||||||||||| || ||||| | Sbjct: 445 caggaatggttgatccaaggaagtttggtttgctagcgaactggcagcgggactacacga 504 Query: 505 tggagcatgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaagctag 564 ||||| | || | |||||||| |||||||| ||||| || | ||||| || ||| ||| Sbjct: 505 tggagaacatcctaacccagctcaagaaagagatggctgcctcgcagaatcgaaagttag 564 Query: 565 tgcagcctccagaagggacattcttctagcggagtgt 601 |||||||||||||||||||||||||||| || ||||| Sbjct: 565 tgcagcctccagaagggacattcttctaacgaagtgt 601
>emb|CT833593.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN051B14, full insert sequence Length = 852 Score = 432 bits (218), Expect = e-118 Identities = 395/454 (87%) Strand = Plus / Plus Query: 146 gatgacgctgggcagctccggcgccggatcgagcgtcgtcgttcctcggaacttcaggct 205 |||||||||||| |||||||| ||||||||||| ||||||||||| || ||||||||| | Sbjct: 106 gatgacgctggggagctccggggccggatcgagggtcgtcgttccgcgaaacttcaggtt 165 Query: 206 gctagaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaat 265 ||||||||||||||| || || || |||||||||||||||||||| || ||||||||||| Sbjct: 166 gctagaagagcttgaacgtggtgaaaagggcattggagatggaaccgtgagctatggaat 225 Query: 266 ggatgatgctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaa 325 ||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| || || Sbjct: 226 ggatgatgcagatgacatctacatgcggtcttggactggcaccatcattggtccacataa 285 Query: 326 tactgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctga 385 || ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 286 tagtgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaaggactacccaga 345 Query: 386 gaaggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagac 445 |||| |||||||||| | || |||||||||||||| ||| | ||||||||||| ||||| Sbjct: 346 gaagccaccatctgtccggtttcattcaagaatcaatatgtcgtgtgttaatcatgagac 405 Query: 446 cggggcggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaat 505 || ||||||||| ||| |||||| |||| |||||||||||||||| |||||||| || Sbjct: 406 tggagcggttgactcgaggaagtttggtgttttagcaaactggcagcgcgagtacaccat 465 Query: 506 ggagcatgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaagctagt 565 |||| | || | |||||||| ||||| || |||||| | | ||||| |||||| | || Sbjct: 466 ggagactatccttacccagctcaagaaggagatggcaaccccgcagaatcgcaagttggt 525 Query: 566 gcagcctccagaagggacattcttctagcggagt 599 ||| |||||||||||||| ||||||||| ||||| Sbjct: 526 gcaacctccagaagggacgttcttctagaggagt 559
>gb|DQ245427.1| Zea mays clone 15420 mRNA sequence Length = 765 Score = 392 bits (198), Expect = e-106 Identities = 384/446 (86%) Strand = Plus / Plus Query: 147 atgacgctgggcagctccggcgccggatcgagcgtcgtcgttcctcggaacttcaggctg 206 ||||||| ||| ||||| | ||||||||| |||||||||||||||||||||||||||| Sbjct: 72 atgacgccgggaagctcggccgccggatccggcgtcgtcgttcctcggaacttcaggctc 131 Query: 207 ctagaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatg 266 |||||||||||||| || || |||||||||||||||||||| || || |||||||||||| Sbjct: 132 ctagaagagcttgaacgtggagagaagggcattggagatgggacagtgagctatggaatg 191 Query: 267 gatgatgctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaat 326 ||||| || |||||||| |||||||| |||||||||||||| |||||||| ||||| ||| Sbjct: 192 gatgacgcagatgacatctacatgcgatcatggactggcactattattggccctcataat 251 Query: 327 actgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgag 386 || |||||||||||||||||||||||||||||| |||| || |||||||||||||||||| Sbjct: 252 accgtccatgagggtcgcatctaccagctgaagttgttctgcgacaaggactaccctgag 311 Query: 387 aaggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagacc 446 ||| ||||||| ||| |||| ||||||||||| ||| | | || |||||||| || || Sbjct: 312 aagccaccatcagttcgatttcattcaagaataaacttaacatgcgttaatcatgaaact 371 Query: 447 ggggcggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatg 506 || | ||||||||||||||||||||| || || | ||||||||||| || ||| ||||| Sbjct: 372 ggagtggttgacccgaagaagttcagcgttctgggtaactggcagcgtgattactcaatg 431 Query: 507 gagcatgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaagctagtg 566 || | || | ||||| || |||||||| ||| || || | ||||||||||||||||| Sbjct: 432 gaatacatcctaacccatctcaagaaagagatgacatcgccacagaaccgcaagctagtt 491 Query: 567 cagcctccagaagggacattcttcta 592 |||||||| ||||||||||||||||| Sbjct: 492 cagcctccggaagggacattcttcta 517
>gb|AY103581.1| Zea mays PCO136340 mRNA sequence Length = 1242 Score = 392 bits (198), Expect = e-106 Identities = 384/446 (86%) Strand = Plus / Plus Query: 147 atgacgctgggcagctccggcgccggatcgagcgtcgtcgttcctcggaacttcaggctg 206 ||||||| ||| ||||| | ||||||||| |||||||||||||||||||||||||||| Sbjct: 160 atgacgccgggaagctcggccgccggatccggcgtcgtcgttcctcggaacttcaggctc 219 Query: 207 ctagaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatg 266 |||||||||||||| || || |||||||||||||||||||| || || |||||||||||| Sbjct: 220 ctagaagagcttgaacgtggagagaagggcattggagatgggacagtgagctatggaatg 279 Query: 267 gatgatgctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaat 326 ||||| || |||||||| |||||||| |||||||||||||| |||||||| ||||| ||| Sbjct: 280 gatgacgcagatgacatctacatgcgatcatggactggcactattattggccctcataat 339 Query: 327 actgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgag 386 || |||||||||||||||||||||||||||||| |||| || |||||||||||||||||| Sbjct: 340 accgtccatgagggtcgcatctaccagctgaagttgttctgcgacaaggactaccctgag 399 Query: 387 aaggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagacc 446 ||| ||||||| ||| |||| ||||||||||| ||| | | || |||||||| || || Sbjct: 400 aagccaccatcagttcgatttcattcaagaataaacttaacatgcgttaatcatgaaact 459 Query: 447 ggggcggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatg 506 || | ||||||||||||||||||||| || || | ||||||||||| || ||| ||||| Sbjct: 460 ggagtggttgacccgaagaagttcagcgttctgggtaactggcagcgtgattactcaatg 519 Query: 507 gagcatgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaagctagtg 566 || | || | ||||| || |||||||| ||| || || | ||||||||||||||||| Sbjct: 520 gaatacatcctaacccatctcaagaaagagatgacatcgccacagaaccgcaagctagtt 579 Query: 567 cagcctccagaagggacattcttcta 592 |||||||| ||||||||||||||||| Sbjct: 580 cagcctccggaagggacattcttcta 605
>gb|BT016303.1| Zea mays clone Contig136 mRNA sequence Length = 790 Score = 385 bits (194), Expect = e-103 Identities = 383/446 (85%) Strand = Plus / Plus Query: 147 atgacgctgggcagctccggcgccggatcgagcgtcgtcgttcctcggaacttcaggctg 206 ||||||| ||| ||||| | ||||||||| |||||||||||||||||||||||||||| Sbjct: 74 atgacgccgggaagctcggccgccggatccggcgtcgtcgttcctcggaacttcaggctc 133 Query: 207 ctagaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatg 266 |||||||||||||| || || |||||||||||||||||||| || || |||||||||||| Sbjct: 134 ctagaagagcttgaacgtggagagaagggcattggagatgggacagtgagctatggaatg 193 Query: 267 gatgatgctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaat 326 ||||| || |||||||| |||||||| |||||||||||||| |||||||| ||||| ||| Sbjct: 194 gatgacgcagatgacatctacatgcgatcatggactggcactattattggccctcataat 253 Query: 327 actgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgag 386 || |||||||||||||||||||||||||||||| |||| || |||||||||||||||||| Sbjct: 254 accgtccatgagggtcgcatctaccagctgaagttgttctgcgacaaggactaccctgag 313 Query: 387 aaggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagacc 446 ||| ||||||| ||| |||| ||||||||||| ||| | | || |||||||| || || Sbjct: 314 aagccaccatcagttcgatttcattcaagaataaacttaacatgcgttaatcatgaaact 373 Query: 447 ggggcggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatg 506 || | ||||||||||||||||||||| || || | ||||||||||| || || ||||| Sbjct: 374 ggagtggttgacccgaagaagttcagcgttctgggtaactggcagcgtgattattcaatg 433 Query: 507 gagcatgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaagctagtg 566 || | || | ||||| || |||||||| ||| || || | ||||||||||||||||| Sbjct: 434 gaatacatcctaacccatctcaagaaagagatgacatcgccacagaaccgcaagctagtt 493 Query: 567 cagcctccagaagggacattcttcta 592 |||||||| ||||||||||||||||| Sbjct: 494 cagcctccggaagggacattcttcta 519
>emb|CT831939.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA023B04, full insert sequence Length = 390 Score = 323 bits (163), Expect = 6e-85 Identities = 223/243 (91%) Strand = Plus / Plus Query: 140 atcgacgatgacgctgggcagctccggcgccggatcgagcgtcgtcgttcctcggaactt 199 |||| ||||||||||||| |||||||||||||||||||||||||||||||| || ||||| Sbjct: 56 atcggcgatgacgctggggagctccggcgccggatcgagcgtcgtcgttccgcgaaactt 115 Query: 200 caggctgctagaagagcttgagcgcggggagaagggcattggagatggaactgtcagcta 259 |||| |||||||||||||||| || || || |||||||||||||||||||| || ||||| Sbjct: 116 caggttgctagaagagcttgaacgtggtgaaaagggcattggagatggaaccgtgagcta 175 Query: 260 tggaatggatgatgctgatgacatatacatgcggtcatggactggcaccattattggtcc 319 ||||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 176 tggaatggatgatgcagatgacatctacatgcggtcttggactggcaccatcattggtcc 235 Query: 320 tcacaatactgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggacta 379 || |||| ||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 236 acataatagtgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaaggacta 295 Query: 380 ccc 382 ||| Sbjct: 296 ccc 298
>ref|NM_001073756.1| Oryza sativa (japonica cultivar-group) Os12g0605400 (Os12g0605400) mRNA, complete cds Length = 923 Score = 242 bits (122), Expect = 2e-60 Identities = 341/414 (82%) Strand = Plus / Plus Query: 180 gtcgtcgttcctcggaacttcaggctgctagaagagcttgagcgcggggagaagggcatt 239 |||||||| ||| |||||||||| |||||||||||||||||| | |||||||||||||| Sbjct: 228 gtcgtcgtgcctaggaacttcagactgctagaagagcttgagagaggggagaagggcatc 287 Query: 240 ggagatggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatgg 299 || |||||| | || |||||||||||||||||||| || || || |||||||| || ||| Sbjct: 288 ggtgatggatcagtaagctatggaatggatgatgcagacgatatctacatgcgctcttgg 347 Query: 300 actggcaccattattggtcctcacaatactgtccatgagggtcgcatctaccagctgaag 359 || ||||| ||||||||||| || || |||||||||||||| || || ||||| |||||| Sbjct: 348 acaggcacaattattggtccccataacactgtccatgagggccggatataccaactgaag 407 Query: 360 ctgttttgtgacaaggactaccctgagaaggcaccatctgttagattccattcaagaatc 419 || || || |||||||||||||| || | | ||||| |||| | ||| || ||||||||| Sbjct: 408 cttttctgcgacaaggactacccagacaggccaccaactgtaaaatttcactcaagaatc 467 Query: 420 aacatggcttgtgttaatcacgagaccggggcggttgacccgaagaagttcagtgtgcta 479 |||||| | ||||| || | |||| || |||||||| | ||||||||| || | Sbjct: 468 aacatgacctgtgtaaacccagagaatggattggttgaccaaaggaagttcagcctgttg 527 Query: 480 gcaaactggcagcgagagtacacaatggagcatgtcttgacccagctgaagaaagacatg 539 |||| |||| || ||||||||||||||| | |||||||||| || |||||||| ||| Sbjct: 528 tcaaattggcgccgcgagtacacaatggaggctatcttgacccaacttaagaaagagatg 587 Query: 540 gcagcgacccagaaccgcaagctagtgcagcctccagaagggacattcttctag 593 ||||| | || ||||| || ||||||||||||||||| ||||||||||||||| Sbjct: 588 gcagcatcacacaaccggaaactagtgcagcctccagaggggacattcttctag 641
>dbj|AK068060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130B07, full insert sequence Length = 924 Score = 242 bits (122), Expect = 2e-60 Identities = 341/414 (82%) Strand = Plus / Plus Query: 180 gtcgtcgttcctcggaacttcaggctgctagaagagcttgagcgcggggagaagggcatt 239 |||||||| ||| |||||||||| |||||||||||||||||| | |||||||||||||| Sbjct: 229 gtcgtcgtgcctaggaacttcagactgctagaagagcttgagagaggggagaagggcatc 288 Query: 240 ggagatggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatgg 299 || |||||| | || |||||||||||||||||||| || || || |||||||| || ||| Sbjct: 289 ggtgatggatcagtaagctatggaatggatgatgcagacgatatctacatgcgctcttgg 348 Query: 300 actggcaccattattggtcctcacaatactgtccatgagggtcgcatctaccagctgaag 359 || ||||| ||||||||||| || || |||||||||||||| || || ||||| |||||| Sbjct: 349 acaggcacaattattggtccccataacactgtccatgagggccggatataccaactgaag 408 Query: 360 ctgttttgtgacaaggactaccctgagaaggcaccatctgttagattccattcaagaatc 419 || || || |||||||||||||| || | | ||||| |||| | ||| || ||||||||| Sbjct: 409 cttttctgcgacaaggactacccagacaggccaccaactgtaaaatttcactcaagaatc 468 Query: 420 aacatggcttgtgttaatcacgagaccggggcggttgacccgaagaagttcagtgtgcta 479 |||||| | ||||| || | |||| || |||||||| | ||||||||| || | Sbjct: 469 aacatgacctgtgtaaacccagagaatggattggttgaccaaaggaagttcagcctgttg 528 Query: 480 gcaaactggcagcgagagtacacaatggagcatgtcttgacccagctgaagaaagacatg 539 |||| |||| || ||||||||||||||| | |||||||||| || |||||||| ||| Sbjct: 529 tcaaattggcgccgcgagtacacaatggaggctatcttgacccaacttaagaaagagatg 588 Query: 540 gcagcgacccagaaccgcaagctagtgcagcctccagaagggacattcttctag 593 ||||| | || ||||| || ||||||||||||||||| ||||||||||||||| Sbjct: 589 gcagcatcacacaaccggaaactagtgcagcctccagaggggacattcttctag 642
>gb|DQ160040.1| Taraxacum officinale TO38-23 (To38-23) mRNA, partial cds Length = 475 Score = 186 bits (94), Expect = 9e-44 Identities = 241/290 (83%) Strand = Plus / Plus Query: 180 gtcgtcgttcctcggaacttcaggctgctagaagagcttgagcgcggggagaagggcatt 239 ||||| || |||||||| ||||| |||| || ||||||||||| || || ||||| || Sbjct: 6 gtcgtggtgcctcggaatttcagattgctggaggagcttgagcgtggagaaaagggtatc 65 Query: 240 ggagatggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatgg 299 |||||||| ||||| ||||||||||||||||||| |||||| || || ||||| |||||| Sbjct: 66 ggagatggcactgtgagctatggaatggatgatggtgatgatatctatatgcgatcatgg 125 Query: 300 actggcaccattattggtcctcacaatactgtccatgagggtcgcatctaccagctgaag 359 || |||||||| || || ||||||||| |||| |||||||||||||||||||| ||||| Sbjct: 126 acaggcaccatcatcggccctcacaattctgtgcatgagggtcgcatctaccaattgaag 185 Query: 360 ctgttttgtgacaaggactaccctgagaaggcaccatctgttagattccattcaagaatc 419 || ||||||||||| || |||||||||||| | ||| |||| | |||||||| | || Sbjct: 186 ctattttgtgacaaagattaccctgagaagcctccaactgtccgtttccattctcgggtc 245 Query: 420 aacatggcttgtgttaatcacgagaccggggcggttgacccgaagaagtt 469 |||||| ||||||| || || || ||||| | ||| || ||||||||||| Sbjct: 246 aacatgacttgtgtcaaccatgaaaccggagtggtggaaccgaagaagtt 295
>ref|NM_115116.3| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme (AT3G52560) mRNA, complete cds Length = 864 Score = 176 bits (89), Expect = 9e-41 Identities = 245/297 (82%) Strand = Plus / Plus Query: 213 gagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgat 272 |||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||| Sbjct: 187 gagcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgat 246 Query: 273 gctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtc 332 | |||||||| || ||||| || |||||||||||||| || ||||||||||| ||||| Sbjct: 247 ggagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaacactgtt 306 Query: 333 catgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaaggca 392 ||||| ||| | ||||| ||| ||||||| ||||||||||| || ||||| ||||| | Sbjct: 307 catgaaggtagaatctatcagttgaagctcttttgtgacaaagattacccggagaaacct 366 Query: 393 ccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagaccggggcg 452 ||| |||| ||||||||||| | |||||||||||||||| || ||||| || || | | Sbjct: 367 ccaactgtccgattccattcacgtgtcaacatggcttgtgtcaaccacgaaacaggagtg 426 Query: 453 gttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatggag 509 || || || ||||| || | | || ||||||||||| ||||||||||||||||| Sbjct: 427 gtggatcctaagaaatttgggctacttgcaaactggcaaagagagtacacaatggag 483
>gb|AY072492.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 587 Score = 176 bits (89), Expect = 9e-41 Identities = 245/297 (82%) Strand = Plus / Plus Query: 213 gagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgat 272 |||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||| Sbjct: 61 gagcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgat 120 Query: 273 gctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtc 332 | |||||||| || ||||| || |||||||||||||| || ||||||||||| ||||| Sbjct: 121 ggagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaacactgtt 180 Query: 333 catgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaaggca 392 ||||| ||| | ||||| ||| ||||||| ||||||||||| || ||||| ||||| | Sbjct: 181 catgaaggtagaatctatcagttgaagctcttttgtgacaaagattacccggagaaacct 240 Query: 393 ccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagaccggggcg 452 ||| |||| ||||||||||| | |||||||||||||||| || ||||| || || | | Sbjct: 241 ccaactgtccgattccattcacgtgtcaacatggcttgtgtcaaccacgaaacaggagtg 300 Query: 453 gttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatggag 509 || || || ||||| || | | || ||||||||||| ||||||||||||||||| Sbjct: 301 gtggatcctaagaaatttgggctacttgcaaactggcaaagagagtacacaatggag 357
>gb|AY042846.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 810 Score = 176 bits (89), Expect = 9e-41 Identities = 245/297 (82%) Strand = Plus / Plus Query: 213 gagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgat 272 |||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||| Sbjct: 136 gagcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgat 195 Query: 273 gctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtc 332 | |||||||| || ||||| || |||||||||||||| || ||||||||||| ||||| Sbjct: 196 ggagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaacactgtt 255 Query: 333 catgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaaggca 392 ||||| ||| | ||||| ||| ||||||| ||||||||||| || ||||| ||||| | Sbjct: 256 catgaaggtagaatctatcagttgaagctcttttgtgacaaagattacccggagaaacct 315 Query: 393 ccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagaccggggcg 452 ||| |||| ||||||||||| | |||||||||||||||| || ||||| || || | | Sbjct: 316 ccaactgtccgattccattcacgtgtcaacatggcttgtgtcaaccacgaaacaggagtg 375 Query: 453 gttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatggag 509 || || || ||||| || | | || ||||||||||| ||||||||||||||||| Sbjct: 376 gtggatcctaagaaatttgggctacttgcaaactggcaaagagagtacacaatggag 432
>emb|BX825709.1|CNS0A69P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL58ZC12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 838 Score = 176 bits (89), Expect = 9e-41 Identities = 245/297 (82%) Strand = Plus / Plus Query: 213 gagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgat 272 |||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||| Sbjct: 162 gagcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgat 221 Query: 273 gctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtc 332 | |||||||| || ||||| || |||||||||||||| || ||||||||||| ||||| Sbjct: 222 ggagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaacactgtt 281 Query: 333 catgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaaggca 392 ||||| ||| | ||||| ||| ||||||| ||||||||||| || ||||| ||||| | Sbjct: 282 catgaaggtagaatctatcagttgaagctcttttgtgacaaagattacccggagaaacct 341 Query: 393 ccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagaccggggcg 452 ||| |||| ||||||||||| | |||||||||||||||| || ||||| || || | | Sbjct: 342 ccaactgtccgattccattcacgtgtcaacatggcttgtgtcaaccacgaaacaggagtg 401 Query: 453 gttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatggag 509 || || || ||||| || | | || ||||||||||| ||||||||||||||||| Sbjct: 402 gtggatcctaagaaatttgggctacttgcaaactggcaaagagagtacacaatggag 458
>gb|DQ246086.1| Zea mays clone 15047 mRNA sequence Length = 907 Score = 172 bits (87), Expect = 1e-39 Identities = 165/191 (86%) Strand = Plus / Plus Query: 180 gtcgtcgttcctcggaacttcaggctgctagaagagcttgagcgcggggagaagggcatt 239 ||||||||||| | ||||| |||||||||||||| || || || || |||||||||||| Sbjct: 126 gtcgtcgttcccagaaactttaggctgctagaagaactagaacgtggtgagaagggcatt 185 Query: 240 ggagatggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatgg 299 || ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||| Sbjct: 186 ggtgatggaactgtgagctatgggatggatgatgctgatgacatatatatgcggtcctgg 245 Query: 300 actggcaccattattggtcctcacaatactgtccatgagggtcgcatctaccagctgaag 359 || || || || |||||||||| ||||||||| || ||||| || |||||||| | ||| Sbjct: 246 acaggaactataattggtcctcccaatactgttcacgagggacgaatctaccaattaaag 305 Query: 360 ctgttttgtga 370 ||||||||||| Sbjct: 306 ctgttttgtga 316
>ref|NM_129165.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme (AT2G36060) mRNA, complete cds Length = 837 Score = 172 bits (87), Expect = 1e-39 Identities = 276/339 (81%) Strand = Plus / Plus Query: 171 ggatcgagcgtcgtcgttcctcggaacttcaggctgctagaagagcttgagcgcggggag 230 |||||||| || |||||||| |||| ||| || |||| || |||||||| || || ||| Sbjct: 200 ggatcgagtgttgtcgttccgaggaatttccggttgctggaggagcttgaacgtggagag 259 Query: 231 aagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatacatg 290 || || ||||||||||||||||| ||||||||||||||||||| |||||||| || ||| Sbjct: 260 aaaggtattggagatggaactgtgagctatggaatggatgatggagatgacatttatatg 319 Query: 291 cggtcatggactggcaccattattggtcctcacaatactgtccatgagggtcgcatctac 350 || || ||||||||||| || || ||||||||||| ||||| ||||||||||| || || Sbjct: 320 cgctcttggactggcactatcatcggtcctcacaacactgtacatgagggtcggatttat 379 Query: 351 cagctgaagctgttttgtgacaaggactaccctgagaaggcaccatctgttagattccat 410 ||| ||||||| || |||||||| || ||||||||||| | || ||||| | |||||| Sbjct: 380 cagttgaagctcttctgtgacaaagattaccctgagaaacctccgactgttcggttccat 439 Query: 411 tcaagaatcaacatggcttgtgttaatcacgagaccggggcggttgacccgaagaagttc 470 || | ||||||||| ||||||| || || || ||||| | ||| || | |||||||| Sbjct: 440 tcgcgtatcaacatgacttgtgtcaaccatgataccggcgtggtggattcaaagaagttt 499 Query: 471 agtgtgctagcaaactggcagcgagagtacacaatggag 509 | || || ||||||||||| || |||||||||||||| Sbjct: 500 ggggttcttgcaaactggcaaagacagtacacaatggag 538
>gb|AY093382.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme (At2g36060) mRNA, complete cds Length = 531 Score = 172 bits (87), Expect = 1e-39 Identities = 276/339 (81%) Strand = Plus / Plus Query: 171 ggatcgagcgtcgtcgttcctcggaacttcaggctgctagaagagcttgagcgcggggag 230 |||||||| || |||||||| |||| ||| || |||| || |||||||| || || ||| Sbjct: 16 ggatcgagtgttgtcgttccgaggaatttccggttgctggaggagcttgaacgtggagag 75 Query: 231 aagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatacatg 290 || || ||||||||||||||||| ||||||||||||||||||| |||||||| || ||| Sbjct: 76 aaaggtattggagatggaactgtgagctatggaatggatgatggagatgacatttatatg 135 Query: 291 cggtcatggactggcaccattattggtcctcacaatactgtccatgagggtcgcatctac 350 || || ||||||||||| || || ||||||||||| ||||| ||||||||||| || || Sbjct: 136 cgctcttggactggcactatcatcggtcctcacaacactgtacatgagggtcggatttat 195 Query: 351 cagctgaagctgttttgtgacaaggactaccctgagaaggcaccatctgttagattccat 410 ||| ||||||| || |||||||| || ||||||||||| | || ||||| | |||||| Sbjct: 196 cagttgaagctcttctgtgacaaagattaccctgagaaacctccgactgttcggttccat 255 Query: 411 tcaagaatcaacatggcttgtgttaatcacgagaccggggcggttgacccgaagaagttc 470 || | ||||||||| ||||||| || || || ||||| | ||| || | |||||||| Sbjct: 256 tcgcgtatcaacatgacttgtgtcaaccatgataccggcgtggtggattcaaagaagttt 315 Query: 471 agtgtgctagcaaactggcagcgagagtacacaatggag 509 | || || ||||||||||| || |||||||||||||| Sbjct: 316 ggggttcttgcaaactggcaaagacagtacacaatggag 354
>gb|AY062760.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme (At2g36060; F11F19.3) mRNA, complete cds Length = 769 Score = 172 bits (87), Expect = 1e-39 Identities = 276/339 (81%) Strand = Plus / Plus Query: 171 ggatcgagcgtcgtcgttcctcggaacttcaggctgctagaagagcttgagcgcggggag 230 |||||||| || |||||||| |||| ||| || |||| || |||||||| || || ||| Sbjct: 134 ggatcgagtgttgtcgttccgaggaatttccggttgctggaggagcttgaacgtggagag 193 Query: 231 aagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatacatg 290 || || ||||||||||||||||| ||||||||||||||||||| |||||||| || ||| Sbjct: 194 aaaggtattggagatggaactgtgagctatggaatggatgatggagatgacatttatatg 253 Query: 291 cggtcatggactggcaccattattggtcctcacaatactgtccatgagggtcgcatctac 350 || || ||||||||||| || || ||||||||||| ||||| ||||||||||| || || Sbjct: 254 cgctcttggactggcactatcatcggtcctcacaacactgtacatgagggtcggatttat 313 Query: 351 cagctgaagctgttttgtgacaaggactaccctgagaaggcaccatctgttagattccat 410 ||| ||||||| || |||||||| || ||||||||||| | || ||||| | |||||| Sbjct: 314 cagttgaagctcttctgtgacaaagattaccctgagaaacctccgactgttcggttccat 373 Query: 411 tcaagaatcaacatggcttgtgttaatcacgagaccggggcggttgacccgaagaagttc 470 || | ||||||||| ||||||| || || || ||||| | ||| || | |||||||| Sbjct: 374 tcgcgtatcaacatgacttgtgtcaaccatgataccggcgtggtggattcaaagaagttt 433 Query: 471 agtgtgctagcaaactggcagcgagagtacacaatggag 509 | || || ||||||||||| || |||||||||||||| Sbjct: 434 ggggttcttgcaaactggcaaagacagtacacaatggag 472
>gb|AY085609.1| Arabidopsis thaliana clone 16125 mRNA, complete sequence Length = 832 Score = 168 bits (85), Expect = 2e-38 Identities = 244/297 (82%) Strand = Plus / Plus Query: 213 gagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgat 272 |||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||| Sbjct: 188 gagcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgat 247 Query: 273 gctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtc 332 | |||||||| || ||||| || ||||||||||| || || ||||||||||| ||||| Sbjct: 248 ggagatgacatctatatgcgttcttggactggcactatcatcggtcctcacaacactgtt 307 Query: 333 catgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaaggca 392 ||||| ||| | ||||| ||| ||||||| ||||||||||| || ||||| ||||| | Sbjct: 308 catgaaggtagaatctatcagttgaagctcttttgtgacaaagattacccggagaaacct 367 Query: 393 ccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagaccggggcg 452 ||| |||| | ||||||||| | |||||||||||||||| |||||||| || || | | Sbjct: 368 ccaactgtccggttccattcacgtgtcaacatggcttgtgtcaatcacgaaacaggagtg 427 Query: 453 gttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatggag 509 || || || ||||| || | | || ||||||||||| ||||||||||||||||| Sbjct: 428 gtggatcctaagaaatttgggctacttgcaaactggcaaagagagtacacaatggag 484
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 163 bits (82), Expect = 1e-36 Identities = 121/134 (90%) Strand = Plus / Minus Query: 186 gttcctcggaacttcaggctgctagaagagcttgagcgcggggagaagggcattggagat 245 ||||| || ||||||||| |||||||||||||||| || || || ||||||||||||||| Sbjct: 7152208 gttccgcgaaacttcaggttgctagaagagcttgaacgtggtgaaaagggcattggagat 7152149 Query: 246 ggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatggactggc 305 ||||| || |||||||||||||||||||| |||||||| ||||||||||| ||||||||| Sbjct: 7152148 ggaaccgtgagctatggaatggatgatgcagatgacatctacatgcggtcttggactggc 7152089 Query: 306 accattattggtcc 319 ||||| |||||||| Sbjct: 7152088 accatcattggtcc 7152075 Score = 139 bits (70), Expect = 2e-29 Identities = 112/126 (88%) Strand = Plus / Minus Query: 329 tgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaa 388 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 7151655 tgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaaggactacccagagaa 7151596 Query: 389 ggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagaccgg 448 | |||||||||| | || |||||||||||||| ||| | ||||||||||| ||||| || Sbjct: 7151595 gccaccatctgtccggtttcattcaagaatcaatatgtcgtgtgttaatcatgagactgg 7151536 Query: 449 ggcggt 454 ||||| Sbjct: 7151535 agcggt 7151530 Score = 95.6 bits (48), Expect = 3e-16 Identities = 123/148 (83%) Strand = Plus / Minus Query: 452 ggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatggagca 511 ||||||| ||| |||||| |||| ||||||||||||||||| |||||||| |||||| Sbjct: 7151438 ggttgactcgaggaagtttggtgttctagcaaactggcagcgcgagtacaccatggagac 7151379 Query: 512 tgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaagctagtgcagcc 571 | || | |||||||| ||||| || |||||| | | ||||| |||||| | ||||| || Sbjct: 7151378 tatccttacccagctcaagaaggagatggcaaccccgcagaatcgcaagttggtgcaacc 7151319 Query: 572 tccagaagggacattcttctagcggagt 599 |||||||||||| ||||||||| ||||| Sbjct: 7151318 tccagaagggacgttcttctagaggagt 7151291 Score = 77.8 bits (39), Expect = 6e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 140 atcgacgatgacgctgggcagctccggcgccggatcgagcgtcgtcg 186 |||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 7153907 atcggcgatgacgctggggagctccggcgccggatcgagcgtcgtcg 7153861
>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1381_H04 Length = 130961 Score = 163 bits (82), Expect = 1e-36 Identities = 121/134 (90%) Strand = Plus / Minus Query: 186 gttcctcggaacttcaggctgctagaagagcttgagcgcggggagaagggcattggagat 245 ||||| || ||||||||| |||||||||||||||| || || || ||||||||||||||| Sbjct: 4313 gttccgcgaaacttcaggttgctagaagagcttgaacgtggtgaaaagggcattggagat 4254 Query: 246 ggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatggactggc 305 ||||| || |||||||||||||||||||| |||||||| ||||||||||| ||||||||| Sbjct: 4253 ggaaccgtgagctatggaatggatgatgcagatgacatctacatgcggtcttggactggc 4194 Query: 306 accattattggtcc 319 ||||| |||||||| Sbjct: 4193 accatcattggtcc 4180 Score = 139 bits (70), Expect = 2e-29 Identities = 112/126 (88%) Strand = Plus / Minus Query: 329 tgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaa 388 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 3760 tgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaaggactacccagagaa 3701 Query: 389 ggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagaccgg 448 | |||||||||| | || |||||||||||||| ||| | ||||||||||| ||||| || Sbjct: 3700 gccaccatctgtccggtttcattcaagaatcaatatgtcgtgtgttaatcatgagactgg 3641 Query: 449 ggcggt 454 ||||| Sbjct: 3640 agcggt 3635 Score = 95.6 bits (48), Expect = 3e-16 Identities = 123/148 (83%) Strand = Plus / Minus Query: 452 ggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatggagca 511 ||||||| ||| |||||| |||| ||||||||||||||||| |||||||| |||||| Sbjct: 3543 ggttgactcgaggaagtttggtgttctagcaaactggcagcgcgagtacaccatggagac 3484 Query: 512 tgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaagctagtgcagcc 571 | || | |||||||| ||||| || |||||| | | ||||| |||||| | ||||| || Sbjct: 3483 tatccttacccagctcaagaaggagatggcaaccccgcagaatcgcaagttggtgcaacc 3424 Query: 572 tccagaagggacattcttctagcggagt 599 |||||||||||| ||||||||| ||||| Sbjct: 3423 tccagaagggacgttcttctagaggagt 3396 Score = 77.8 bits (39), Expect = 6e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 140 atcgacgatgacgctgggcagctccggcgccggatcgagcgtcgtcg 186 |||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 6012 atcggcgatgacgctggggagctccggcgccggatcgagcgtcgtcg 5966
>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0592C05 Length = 150478 Score = 163 bits (82), Expect = 1e-36 Identities = 121/134 (90%) Strand = Plus / Minus Query: 186 gttcctcggaacttcaggctgctagaagagcttgagcgcggggagaagggcattggagat 245 ||||| || ||||||||| |||||||||||||||| || || || ||||||||||||||| Sbjct: 104287 gttccgcgaaacttcaggttgctagaagagcttgaacgtggtgaaaagggcattggagat 104228 Query: 246 ggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatggactggc 305 ||||| || |||||||||||||||||||| |||||||| ||||||||||| ||||||||| Sbjct: 104227 ggaaccgtgagctatggaatggatgatgcagatgacatctacatgcggtcttggactggc 104168 Query: 306 accattattggtcc 319 ||||| |||||||| Sbjct: 104167 accatcattggtcc 104154 Score = 139 bits (70), Expect = 2e-29 Identities = 112/126 (88%) Strand = Plus / Minus Query: 329 tgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaa 388 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 103734 tgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaaggactacccagagaa 103675 Query: 389 ggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagaccgg 448 | |||||||||| | || |||||||||||||| ||| | ||||||||||| ||||| || Sbjct: 103674 gccaccatctgtccggtttcattcaagaatcaatatgtcgtgtgttaatcatgagactgg 103615 Query: 449 ggcggt 454 ||||| Sbjct: 103614 agcggt 103609 Score = 95.6 bits (48), Expect = 3e-16 Identities = 123/148 (83%) Strand = Plus / Minus Query: 452 ggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatggagca 511 ||||||| ||| |||||| |||| ||||||||||||||||| |||||||| |||||| Sbjct: 103517 ggttgactcgaggaagtttggtgttctagcaaactggcagcgcgagtacaccatggagac 103458 Query: 512 tgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaagctagtgcagcc 571 | || | |||||||| ||||| || |||||| | | ||||| |||||| | ||||| || Sbjct: 103457 tatccttacccagctcaagaaggagatggcaaccccgcagaatcgcaagttggtgcaacc 103398 Query: 572 tccagaagggacattcttctagcggagt 599 |||||||||||| ||||||||| ||||| Sbjct: 103397 tccagaagggacgttcttctagaggagt 103370 Score = 77.8 bits (39), Expect = 6e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 140 atcgacgatgacgctgggcagctccggcgccggatcgagcgtcgtcg 186 |||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 105986 atcggcgatgacgctggggagctccggcgccggatcgagcgtcgtcg 105940
>gb|AY089084.1| Arabidopsis thaliana clone 29951 mRNA, complete sequence Length = 798 Score = 161 bits (81), Expect = 5e-36 Identities = 243/297 (81%) Strand = Plus / Plus Query: 213 gagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgat 272 |||||||| || || ||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 218 gagcttgaacgtggagagaaaggtattggagatggaactgtgagctatggaatggatgat 277 Query: 273 gctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtc 332 | |||||||| || ||||| || ||||||||||| || || ||||||||||| ||||| Sbjct: 278 ggagatgacatttatatgcgctcttggactggcactatcatcggtcctcacaacactgta 337 Query: 333 catgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaaggca 392 ||||||||||| || || ||| ||||||| || |||||||| || ||||||||||| | Sbjct: 338 catgagggtcggatttatcagttgaagctcttctgtgacaaagattaccctgagaaacct 397 Query: 393 ccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagaccggggcg 452 || ||||| | |||||||| | ||||||||| ||||||| || || || ||||| | | Sbjct: 398 ccgactgttcggttccattcgcgtatcaacatgacttgtgtcaaccatgataccggcgtg 457 Query: 453 gttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatggag 509 || || | |||||||| | || || ||||||||||| || |||||||||||||| Sbjct: 458 gtggattcaaagaagtttggggttcttgcaaactggcaaagacagtacacaatggag 514
>emb|CT987735.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 842 Score = 155 bits (78), Expect = 3e-34 Identities = 300/374 (80%) Strand = Plus / Plus Query: 171 ggatcgagcgtcgtcgttcctcggaacttcaggctgctagaagagcttgagcgcggggag 230 |||||| | |||||||||||||| || ||||| | | || || |||||||| || || Sbjct: 162 ggatcgggggtcgtcgttcctcgaaatttcagattattggaggaacttgagcgtggagaa 221 Query: 231 aagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatacatg 290 || || ||||||||||| ||||||||||| || |||||||||| || ||||| |||||| Sbjct: 222 aaaggaattggagatggcactgtcagctacgggatggatgatggagacgacatttacatg 281 Query: 291 cggtcatggactggcaccattattggtcctcacaatactgtccatgagggtcgcatctac 350 | || ||||||||||| || |||||||||||||||||||| ||||| ||||| |||||| Sbjct: 282 agatcttggactggcacaatcattggtcctcacaatactgtacatgaaggtcgtatctac 341 Query: 351 cagctgaagctgttttgtgacaaggactaccctgagaaggcaccatctgttagattccat 410 ||| |||||||||| || ||||| || ||||| || ||| |||| ||||| | || ||| Sbjct: 342 cagttgaagctgttctgcgacaaagattacccggaaaagccacccactgttcgttttcat 401 Query: 411 tcaagaatcaacatggcttgtgttaatcacgagaccggggcggttgacccgaagaagttc 470 ||| | ||||||||| | || ||||| || || || || | ||| || |||||||| || Sbjct: 402 tcacgcatcaacatgacatgcgttaaccatgaaactggagtggtcgagccgaagaaattt 461 Query: 471 agtgtgctagcaaactggcagcgagagtacacaatggagcatgtcttgacccagctgaag 530 || |||| ||||| |||||| | |||||||| |||||| | | |||| ||||||||| Sbjct: 462 ggtctgctcgcaaattggcagagggagtacaccatggaggacatactgactcagctgaag 521 Query: 531 aaagacatggcagc 544 || || |||||||| Sbjct: 522 aaggaaatggcagc 535
>ref|NM_180353.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme (AT3G52560) mRNA, complete cds Length = 864 Score = 155 bits (78), Expect = 3e-34 Identities = 245/300 (81%), Gaps = 3/300 (1%) Strand = Plus / Plus Query: 213 gagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgat 272 |||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||| Sbjct: 187 gagcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgat 246 Query: 273 gctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaa---tact 329 | |||||||| || ||||| || |||||||||||||| || ||||||||||| ||| Sbjct: 247 ggagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaacgtaact 306 Query: 330 gtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaag 389 || ||||| ||| | ||||| ||| ||||||| ||||||||||| || ||||| ||||| Sbjct: 307 gttcatgaaggtagaatctatcagttgaagctcttttgtgacaaagattacccggagaaa 366 Query: 390 gcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagaccggg 449 | ||| |||| ||||||||||| | |||||||||||||||| || ||||| || || Sbjct: 367 cctccaactgtccgattccattcacgtgtcaacatggcttgtgtcaaccacgaaacagga 426 Query: 450 gcggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatggag 509 | ||| || || ||||| || | | || ||||||||||| ||||||||||||||||| Sbjct: 427 gtggtggatcctaagaaatttgggctacttgcaaactggcaaagagagtacacaatggag 486
>ref|NM_001057598.1| Oryza sativa (japonica cultivar-group) Os03g0712300 (Os03g0712300) mRNA, complete cds Length = 789 Score = 151 bits (76), Expect = 5e-33 Identities = 163/192 (84%) Strand = Plus / Plus Query: 179 cgtcgtcgttcctcggaacttcaggctgctagaagagcttgagcgcggggagaagggcat 238 |||||||||||| | ||||| || ||||| |||||||||||||| || ||||||||||| Sbjct: 119 cgtcgtcgttcccagaaactttagactgcttgaagagcttgagcgaggtgagaagggcat 178 Query: 239 tggagatggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatg 298 ||| ||||| || || |||||||||||||||||||||||||||||||| ||||| || || Sbjct: 179 tggtgatgggacagtgagctatggaatggatgatgctgatgacatatatatgcgttcctg 238 Query: 299 gactggcaccattattggtcctcacaatactgtccatgagggtcgcatctaccagctgaa 358 ||| || || || ||||| |||| |||||||| |||||||| || ||||| ||| |||| Sbjct: 239 gacaggaactatcattggccctcctaatactgttcatgagggacgaatctatcagttgaa 298 Query: 359 gctgttttgtga 370 | |||| ||||| Sbjct: 299 gttgttctgtga 310
>ref|NM_179928.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme (AT2G36060) mRNA, complete cds Length = 840 Score = 151 bits (76), Expect = 5e-33 Identities = 276/342 (80%), Gaps = 3/342 (0%) Strand = Plus / Plus Query: 171 ggatcgagcgtcgtcgttcctcggaacttcaggctgctagaagagcttgagcgcggggag 230 |||||||| || |||||||| |||| ||| || |||| || |||||||| || || ||| Sbjct: 200 ggatcgagtgttgtcgttccgaggaatttccggttgctggaggagcttgaacgtggagag 259 Query: 231 aagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatacatg 290 || || ||||||||||||||||| ||||||||||||||||||| |||||||| || ||| Sbjct: 260 aaaggtattggagatggaactgtgagctatggaatggatgatggagatgacatttatatg 319 Query: 291 cggtcatggactggcaccattattggtcctcacaa---tactgtccatgagggtcgcatc 347 || || ||||||||||| || || ||||||||||| ||||| ||||||||||| || Sbjct: 320 cgctcttggactggcactatcatcggtcctcacaacgtaactgtacatgagggtcggatt 379 Query: 348 taccagctgaagctgttttgtgacaaggactaccctgagaaggcaccatctgttagattc 407 || ||| ||||||| || |||||||| || ||||||||||| | || ||||| | ||| Sbjct: 380 tatcagttgaagctcttctgtgacaaagattaccctgagaaacctccgactgttcggttc 439 Query: 408 cattcaagaatcaacatggcttgtgttaatcacgagaccggggcggttgacccgaagaag 467 ||||| | ||||||||| ||||||| || || || ||||| | ||| || | |||||| Sbjct: 440 cattcgcgtatcaacatgacttgtgtcaaccatgataccggcgtggtggattcaaagaag 499 Query: 468 ttcagtgtgctagcaaactggcagcgagagtacacaatggag 509 || | || || ||||||||||| || |||||||||||||| Sbjct: 500 tttggggttcttgcaaactggcaaagacagtacacaatggag 541
>dbj|AK120951.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038L10, full insert sequence Length = 790 Score = 151 bits (76), Expect = 5e-33 Identities = 163/192 (84%) Strand = Plus / Plus Query: 179 cgtcgtcgttcctcggaacttcaggctgctagaagagcttgagcgcggggagaagggcat 238 |||||||||||| | ||||| || ||||| |||||||||||||| || ||||||||||| Sbjct: 120 cgtcgtcgttcccagaaactttagactgcttgaagagcttgagcgaggtgagaagggcat 179 Query: 239 tggagatggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatg 298 ||| ||||| || || |||||||||||||||||||||||||||||||| ||||| || || Sbjct: 180 tggtgatgggacagtgagctatggaatggatgatgctgatgacatatatatgcgttcctg 239 Query: 299 gactggcaccattattggtcctcacaatactgtccatgagggtcgcatctaccagctgaa 358 ||| || || || ||||| |||| |||||||| |||||||| || ||||| ||| |||| Sbjct: 240 gacaggaactatcattggccctcctaatactgttcatgagggacgaatctatcagttgaa 299 Query: 359 gctgttttgtga 370 | |||| ||||| Sbjct: 300 gttgttctgtga 311
>gb|AY107839.1| Zea mays PCO143146 mRNA sequence Length = 1245 Score = 143 bits (72), Expect = 1e-30 Identities = 150/176 (85%) Strand = Plus / Plus Query: 195 aacttcaggctgctagaagagcttgagcgcggggagaagggcattggagatggaactgtc 254 ||||| |||||||||||||| || || || || |||||||||||||| ||||||||||| Sbjct: 265 aactttaggctgctagaagaactagaacgtggtgagaagggcattggtgatggaactgtg 324 Query: 255 agctatggaatggatgatgctgatgacatatacatgcggtcatggactggcaccattatt 314 |||||||| ||||| |||||||||||||||| |||||||| ||||| || || || ||| Sbjct: 325 agctatgggatggacgatgctgatgacatatttatgcggtcctggacaggaactatcatt 384 Query: 315 ggtcctcacaatactgtccatgagggtcgcatctaccagctgaagctgttttgtga 370 ||||||| ||| ||||| || ||||| || ||||| ||| | |||||||||||||| Sbjct: 385 ggtcctcccaacactgttcacgagggacgaatctatcagttaaagctgttttgtga 440
>gb|DQ235194.1| Solanum tuberosum clone 168B03 ubiquitin-conjugating enzyme family protein-like mRNA, complete cds Length = 682 Score = 135 bits (68), Expect = 3e-28 Identities = 152/180 (84%) Strand = Plus / Plus Query: 216 cttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatgct 275 ||||| || ||||||||||| ||||||||||| || || |||||||| |||||||||| Sbjct: 166 cttgaacgtggggagaagggtattggagatgggacagtgagctatggtatggatgatgga 225 Query: 276 gatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtccat 335 ||||| || || ||||| || |||||||||||||||||||||||||||||| |||| ||| Sbjct: 226 gatgatatttatatgcgttcttggactggcaccattattggtcctcacaattctgtgcat 285 Query: 336 gagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaaggcacca 395 || || ||||| || ||| ||||||| || || |||||||| || || |||||| ||||| Sbjct: 286 gaaggccgcatttatcagttgaagctattctgcgacaaggattatccggagaagccacca 345
>gb|DQ191643.1| Solanum tuberosum ubiquitin-conjugating enzyme family protein-like protein mRNA, complete cds Length = 764 Score = 135 bits (68), Expect = 3e-28 Identities = 152/180 (84%) Strand = Plus / Plus Query: 216 cttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatgct 275 ||||| || ||||||||||| ||||||||||| || || |||||||| |||||||||| Sbjct: 158 cttgaacgtggggagaagggtattggagatgggacagtgagctatggtatggatgatgga 217 Query: 276 gatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtccat 335 ||||| || || ||||| || |||||||||||||||||||||||||||||| |||| ||| Sbjct: 218 gatgatatttatatgcgttcttggactggcaccattattggtcctcacaattctgtgcat 277 Query: 336 gagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaaggcacca 395 || || ||||| || ||| ||||||| || || |||||||| || || |||||| ||||| Sbjct: 278 gaaggccgcatttatcagttgaagctattctgcgacaaggattatccggagaagccacca 337
>gb|AC150979.15| Medicago truncatula clone mth2-115a17, complete sequence Length = 152779 Score = 133 bits (67), Expect = 1e-27 Identities = 97/107 (90%) Strand = Plus / Minus Query: 210 gaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggat 269 |||||||||||||| || |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 105551 gaagagcttgagcgaggtgagaagggaattggagatggaactgttagctatggaatggat 105492 Query: 270 gatgctgatgacatatacatgcggtcatggactggcaccattattgg 316 || |||||||| |||| ||||| |||||||||||| || |||||||| Sbjct: 105491 gacgctgatgatatattcatgcagtcatggactgggactattattgg 105445 Score = 63.9 bits (32), Expect = 9e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 327 actgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgag 386 ||||| ||||| ||||| ||||||||| ||||| ||||||||| |||||| || || || Sbjct: 104087 actgttcatgaaggtcgtatctaccagttgaagttgttttgtggcaaggattatccagac 104028 Query: 387 aaggcaccatctgttagatt 406 || |||||||||||||||| Sbjct: 104027 aatccaccatctgttagatt 104008
>gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete sequence Length = 120870 Score = 133 bits (67), Expect = 1e-27 Identities = 97/107 (90%) Strand = Plus / Minus Query: 210 gaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggat 269 |||||||||||||| || |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 2883 gaagagcttgagcgaggtgagaagggaattggagatggaactgttagctatggaatggat 2824 Query: 270 gatgctgatgacatatacatgcggtcatggactggcaccattattgg 316 || |||||||| |||| ||||| |||||||||||| || |||||||| Sbjct: 2823 gacgctgatgatatattcatgcagtcatggactgggactattattgg 2777 Score = 63.9 bits (32), Expect = 9e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 327 actgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgag 386 ||||| ||||| ||||| ||||||||| ||||| ||||||||| |||||| || || || Sbjct: 1419 actgttcatgaaggtcgtatctaccagttgaagttgttttgtggcaaggattatccagac 1360 Query: 387 aaggcaccatctgttagatt 406 || |||||||||||||||| Sbjct: 1359 aatccaccatctgttagatt 1340
>gb|DQ097727.1| Arachis hypogaea ubiquitin-conjugating enzyme 2 mRNA, complete cds Length = 818 Score = 129 bits (65), Expect = 2e-26 Identities = 164/197 (83%) Strand = Plus / Plus Query: 210 gaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggat 269 |||||||||||| | || |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 159 gaagagcttgagagaggtgagaagggaattggagatggaactgtaagctatggaatggat 218 Query: 270 gatgctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatact 329 ||||||||||| || ||||||| ||||||||||| || ||||| ||||| | |||| Sbjct: 219 gatgctgatgatatctacatgcaatcatggactgggacaattataggtccccctggtact 278 Query: 330 gtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaag 389 ||||| || || || |||||||| |||| ||||||||| ||||| || || || || Sbjct: 279 gtccacgaagggcgtatctaccaattgaaattgttttgtggtaaggattatccagacaat 338 Query: 390 gcaccatctgttagatt 406 |||||||||||||||| Sbjct: 339 ccaccatctgttagatt 355
>dbj|AP004536.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT15N19, TM0097b, complete sequence Length = 78574 Score = 127 bits (64), Expect = 7e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 210 gaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggat 269 |||||||||||||| || |||||||| ||||||||||||||||| |||||||||||||| Sbjct: 75155 gaagagcttgagcgaggtgagaagggaattggagatggaactgtaagctatggaatggac 75096 Query: 270 gatgctgatgacatatacatgcggtcatggactggcaccattat 313 || |||||||| |||||||||| |||||||||||| || ||||| Sbjct: 75095 gacgctgatgatatatacatgcagtcatggactggaacaattat 75052
>gb|AY587772.1| Tamarix androssowii ubiquitin-conjugating enzyme family protein mRNA, complete cds Length = 607 Score = 125 bits (63), Expect = 3e-25 Identities = 150/179 (83%) Strand = Plus / Plus Query: 195 aacttcaggctgctagaagagcttgagcgcggggagaagggcattggagatggaactgtc 254 ||||||||| |||| || || ||||| || || || || || ||||||||||||| |||| Sbjct: 144 aacttcaggttgctggaggaacttgaacgtggtgaaaaaggaattggagatggaagtgtc 203 Query: 255 agctatggaatggatgatgctgatgacatatacatgcggtcatggactggcaccattatt 314 || ||||| |||||||||| ||||| ||||| ||||| || ||||| ||||| || ||| Sbjct: 204 agttatggtatggatgatggagatgatatatatatgcgttcttggacaggcacaataatt 263 Query: 315 ggtcctcacaatactgtccatgagggtcgcatctaccagctgaagctgttttgtgacaa 373 ||||||||||||||||| |||||||| ||||| || || |||||||| || |||||||| Sbjct: 264 ggtcctcacaatactgtacatgagggccgcatttatcaactgaagctcttctgtgacaa 322
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 125 bits (63), Expect = 3e-25 Identities = 111/127 (87%) Strand = Plus / Minus Query: 193 ggaacttcaggctgctagaagagcttgagcgcggggagaagggcattggagatggaactg 252 |||||||||| |||||||||||||||||| | |||||||||||||| || |||||| | | Sbjct: 25593366 ggaacttcagactgctagaagagcttgagagaggggagaagggcatcggtgatggatcag 25593307 Query: 253 tcagctatggaatggatgatgctgatgacatatacatgcggtcatggactggcaccatta 312 | |||||||||||||||||||| || || || |||||||| || ||||| ||||| |||| Sbjct: 25593306 taagctatggaatggatgatgcagacgatatctacatgcgctcttggacaggcacaatta 25593247 Query: 313 ttggtcc 319 ||||||| Sbjct: 25593246 ttggtcc 25593240 Score = 93.7 bits (47), Expect = 1e-15 Identities = 86/99 (86%) Strand = Plus / Minus Query: 495 gagtacacaatggagcatgtcttgacccagctgaagaaagacatggcagcgacccagaac 554 ||||||||||||||| | |||||||||| || |||||||| |||||||| | || ||| Sbjct: 25592850 gagtacacaatggaggctatcttgacccaacttaagaaagagatggcagcatcacacaac 25592791 Query: 555 cgcaagctagtgcagcctccagaagggacattcttctag 593 || || ||||||||||||||||| ||||||||||||||| Sbjct: 25592790 cggaaactagtgcagcctccagaggggacattcttctag 25592752 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Minus Query: 327 actgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgag 386 |||||||||||||| || || ||||| |||||||| || || |||||||||||||| || Sbjct: 25593109 actgtccatgagggccggatataccaactgaagcttttctgcgacaaggactacccagac 25593050 Query: 387 aaggcaccatctgttagattccattcaagaatcaacatg 425 | | ||||| |||| | ||| || ||||||||||||||| Sbjct: 25593049 aggccaccaactgtaaaatttcactcaagaatcaacatg 25593011
>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127003 Score = 125 bits (63), Expect = 3e-25 Identities = 111/127 (87%) Strand = Plus / Plus Query: 193 ggaacttcaggctgctagaagagcttgagcgcggggagaagggcattggagatggaactg 252 |||||||||| |||||||||||||||||| | |||||||||||||| || |||||| | | Sbjct: 80352 ggaacttcagactgctagaagagcttgagagaggggagaagggcatcggtgatggatcag 80411 Query: 253 tcagctatggaatggatgatgctgatgacatatacatgcggtcatggactggcaccatta 312 | |||||||||||||||||||| || || || |||||||| || ||||| ||||| |||| Sbjct: 80412 taagctatggaatggatgatgcagacgatatctacatgcgctcttggacaggcacaatta 80471 Query: 313 ttggtcc 319 ||||||| Sbjct: 80472 ttggtcc 80478 Score = 93.7 bits (47), Expect = 1e-15 Identities = 86/99 (86%) Strand = Plus / Plus Query: 495 gagtacacaatggagcatgtcttgacccagctgaagaaagacatggcagcgacccagaac 554 ||||||||||||||| | |||||||||| || |||||||| |||||||| | || ||| Sbjct: 80868 gagtacacaatggaggctatcttgacccaacttaagaaagagatggcagcatcacacaac 80927 Query: 555 cgcaagctagtgcagcctccagaagggacattcttctag 593 || || ||||||||||||||||| ||||||||||||||| Sbjct: 80928 cggaaactagtgcagcctccagaggggacattcttctag 80966 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Plus Query: 327 actgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgag 386 |||||||||||||| || || ||||| |||||||| || || |||||||||||||| || Sbjct: 80609 actgtccatgagggccggatataccaactgaagcttttctgcgacaaggactacccagac 80668 Query: 387 aaggcaccatctgttagattccattcaagaatcaacatg 425 | | ||||| |||| | ||| || ||||||||||||||| Sbjct: 80669 aggccaccaactgtaaaatttcactcaagaatcaacatg 80707
>gb|DQ160024.1| Taraxacum officinale TO25-123 (To25-123) mRNA, partial cds Length = 203 Score = 123 bits (62), Expect = 1e-24 Identities = 116/134 (86%) Strand = Plus / Plus Query: 240 ggagatggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatgg 299 |||||||| || || || |||||||||||||||| || ||||| |||||||| |||||| Sbjct: 23 ggagatggcacagtgagttatggaatggatgatggcgacgacatttacatgcgttcatgg 82 Query: 300 actggcaccattattggtcctcacaatactgtccatgagggtcgcatctaccagctgaag 359 ||||||||||| |||||||||||||| |||| || || |||||||| || || |||||| Sbjct: 83 actggcaccatcattggtcctcacaactctgtacacgaaggtcgcatttatcaactgaag 142 Query: 360 ctgttttgtgacaa 373 |||||||||||||| Sbjct: 143 ctgttttgtgacaa 156
>gb|DQ642432.1| Zea mays RFLP probe umc107 (CBM 1.10) genomic sequence Length = 1105 Score = 117 bits (59), Expect = 7e-23 Identities = 110/127 (86%) Strand = Plus / Plus Query: 195 aacttcaggctgctagaagagcttgagcgcggggagaagggcattggagatggaactgtc 254 ||||| |||||||||||||| || || || || |||||||||||||| ||||||||||| Sbjct: 15 aactttaggctgctagaagaactagaacgtggtgagaagggcattggtgatggaactgtg 74 Query: 255 agctatggaatggatgatgctgatgacatatacatgcggtcatggactggcaccattatt 314 |||||||| ||||| |||||||||||||||| |||||||| ||||| || || || ||| Sbjct: 75 agctatgggatggacgatgctgatgacatatttatgcggtcctggacaggaactatcatt 134 Query: 315 ggtcctc 321 ||||||| Sbjct: 135 ggtcctc 141
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 117 bits (59), Expect = 7e-23 Identities = 95/107 (88%) Strand = Plus / Plus Query: 195 aacttcaggctgctagaagagcttgagcgcggggagaagggcattggagatggaactgtc 254 ||||| || ||||| |||||||||||||| || |||||||||||||| ||||| || || Sbjct: 28581840 aactttagactgcttgaagagcttgagcgaggtgagaagggcattggtgatgggacagtg 28581899 Query: 255 agctatggaatggatgatgctgatgacatatacatgcggtcatggac 301 |||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 28581900 agctatggaatggatgatgctgatgacatatatatgcgttcctggac 28581946
>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete sequence Length = 143681 Score = 117 bits (59), Expect = 7e-23 Identities = 95/107 (88%) Strand = Plus / Plus Query: 195 aacttcaggctgctagaagagcttgagcgcggggagaagggcattggagatggaactgtc 254 ||||| || ||||| |||||||||||||| || |||||||||||||| ||||| || || Sbjct: 84646 aactttagactgcttgaagagcttgagcgaggtgagaagggcattggtgatgggacagtg 84705 Query: 255 agctatggaatggatgatgctgatgacatatacatgcggtcatggac 301 |||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 84706 agctatggaatggatgatgctgatgacatatatatgcgttcctggac 84752
>emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BAC clone F3C22 Length = 100028 Score = 113 bits (57), Expect = 1e-21 Identities = 99/113 (87%) Strand = Plus / Minus Query: 213 gagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgat 272 |||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||| Sbjct: 15862 gagcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgat 15803 Query: 273 gctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaa 325 | |||||||| || ||||| || |||||||||||||| || ||||||||||| Sbjct: 15802 ggagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaa 15750 Score = 63.9 bits (32), Expect = 9e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 327 actgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgag 386 ||||| ||||| ||| | ||||| ||| ||||||| ||||||||||| || ||||| ||| Sbjct: 15508 actgttcatgaaggtagaatctatcagttgaagctcttttgtgacaaagattacccggag 15449 Query: 387 aaggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacga 442 || | ||| |||| ||||||||||| | |||||||||||||||| || ||||| Sbjct: 15448 aaacctccaactgtccgattccattcacgtgtcaacatggcttgtgtcaaccacga 15393 Score = 44.1 bits (22), Expect = 0.84 Identities = 28/30 (93%) Strand = Plus / Minus Query: 480 gcaaactggcagcgagagtacacaatggag 509 ||||||||||| ||||||||||||||||| Sbjct: 15271 gcaaactggcaaagagagtacacaatggag 15242
>emb|AL050300.2|ATF22O6 Arabidopsis thaliana DNA chromosome 3, BAC clone F22O6 Length = 93443 Score = 113 bits (57), Expect = 1e-21 Identities = 99/113 (87%) Strand = Plus / Minus Query: 213 gagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgat 272 |||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||| Sbjct: 77579 gagcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgat 77520 Query: 273 gctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaa 325 | |||||||| || ||||| || |||||||||||||| || ||||||||||| Sbjct: 77519 ggagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaa 77467 Score = 63.9 bits (32), Expect = 9e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 327 actgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgag 386 ||||| ||||| ||| | ||||| ||| ||||||| ||||||||||| || ||||| ||| Sbjct: 77225 actgttcatgaaggtagaatctatcagttgaagctcttttgtgacaaagattacccggag 77166 Query: 387 aaggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacga 442 || | ||| |||| ||||||||||| | |||||||||||||||| || ||||| Sbjct: 77165 aaacctccaactgtccgattccattcacgtgtcaacatggcttgtgtcaaccacga 77110 Score = 44.1 bits (22), Expect = 0.84 Identities = 28/30 (93%) Strand = Plus / Minus Query: 480 gcaaactggcagcgagagtacacaatggag 509 ||||||||||| ||||||||||||||||| Sbjct: 76988 gcaaactggcaaagagagtacacaatggag 76959
>ref|NM_102175.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme (AT1G23260) mRNA, complete cds Length = 772 Score = 105 bits (53), Expect = 3e-19 Identities = 104/121 (85%) Strand = Plus / Plus Query: 210 gaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggat 269 ||||||||||| | || ||||| || ||||||||||| ||||| ||||||||||||||| Sbjct: 166 gaagagcttgaaagaggtgagaaaggtattggagatggtactgttagctatggaatggat 225 Query: 270 gatgctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatact 329 ||||||||||| || || |||| || ||||||||||||||| ||||||||| |||||| Sbjct: 226 gatgctgatgatatttatatgcaatcttggactggcaccattcttggtcctcctaatact 285 Query: 330 g 330 | Sbjct: 286 g 286
>gb|AY093340.1| Arabidopsis thaliana similar to DNA binding protein (At1g23260) mRNA, complete cds Length = 618 Score = 105 bits (53), Expect = 3e-19 Identities = 104/121 (85%) Strand = Plus / Plus Query: 210 gaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggat 269 ||||||||||| | || ||||| || ||||||||||| ||||| ||||||||||||||| Sbjct: 52 gaagagcttgaaagaggtgagaaaggtattggagatggtactgttagctatggaatggat 111 Query: 270 gatgctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatact 329 ||||||||||| || || |||| || ||||||||||||||| ||||||||| |||||| Sbjct: 112 gatgctgatgatatttatatgcaatcttggactggcaccattcttggtcctcctaatact 171 Query: 330 g 330 | Sbjct: 172 g 172
>gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 map g6825, complete sequence Length = 120938 Score = 105 bits (53), Expect = 3e-19 Identities = 98/113 (86%) Strand = Plus / Plus Query: 213 gagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgat 272 |||||||| || || ||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 13437 gagcttgaacgtggagagaaaggtattggagatggaactgtgagctatggaatggatgat 13496 Query: 273 gctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaa 325 | |||||||| || ||||| || ||||||||||| || || ||||||||||| Sbjct: 13497 ggagatgacatttatatgcgctcttggactggcactatcatcggtcctcacaa 13549 Score = 54.0 bits (27), Expect = 9e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 327 actgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgag 386 ||||| ||||||||||| || || ||| ||||||| || |||||||| || ||||||||| Sbjct: 13677 actgtacatgagggtcggatttatcagttgaagctcttctgtgacaaagattaccctgag 13736 Query: 387 aaggcaccatctgttagattccattcaagaatcaacatggcttgtgt 433 || | || ||||| | |||||||| | ||||||||| ||||||| Sbjct: 13737 aaacctccgactgttcggttccattcgcgtatcaacatgacttgtgt 13783
>gb|AY059896.1| Arabidopsis thaliana similar to DNA binding protein (At1g23260; F26F24.10) mRNA, complete cds Length = 771 Score = 105 bits (53), Expect = 3e-19 Identities = 104/121 (85%) Strand = Plus / Plus Query: 210 gaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggat 269 ||||||||||| | || ||||| || ||||||||||| ||||| ||||||||||||||| Sbjct: 166 gaagagcttgaaagaggtgagaaaggtattggagatggtactgttagctatggaatggat 225 Query: 270 gatgctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatact 329 ||||||||||| || || |||| || ||||||||||||||| ||||||||| |||||| Sbjct: 226 gatgctgatgatatttatatgcaatcttggactggcaccattcttggtcctcctaatact 285 Query: 330 g 330 | Sbjct: 286 g 286
>gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana BAC F26F24 from chromosome I, complete sequence Length = 99053 Score = 103 bits (52), Expect = 1e-18 Identities = 97/112 (86%) Strand = Plus / Minus Query: 210 gaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggat 269 ||||||||||| | || ||||| || ||||||||||| ||||| ||||||||||||||| Sbjct: 34657 gaagagcttgaaagaggtgagaaaggtattggagatggtactgttagctatggaatggat 34598 Query: 270 gatgctgatgacatatacatgcggtcatggactggcaccattattggtcctc 321 ||||||||||| || || |||| || ||||||||||||||| ||||||||| Sbjct: 34597 gatgctgatgatatttatatgcaatcttggactggcaccattcttggtcctc 34546
>gb|BT013203.1| Lycopersicon esculentum clone 134376R, mRNA sequence Length = 843 Score = 101 bits (51), Expect = 4e-18 Identities = 108/127 (85%) Strand = Plus / Plus Query: 243 gatggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatggact 302 |||||||||||||||||||| ||||||||||| |||||| | ||||||| ||||||||| Sbjct: 226 gatggaactgtcagctatgggatggatgatgcagatgacgtgtacatgcagtcatggaca 285 Query: 303 ggcaccattattggtcctcacaatactgtccatgagggtcgcatctaccagctgaagctg 362 || || || ||||| |||| |||||||| || || || |||||||| |||||||| || Sbjct: 286 ggaactatcattggccctcctaatactgtacacgaagggcgcatctatcagctgaaacta 345 Query: 363 ttttgtg 369 ||||||| Sbjct: 346 ttttgtg 352
>gb|AF051209.1|AF051209 Picea mariana CROC-1-like protein (Sb13) mRNA, partial cds Length = 700 Score = 99.6 bits (50), Expect = 2e-17 Identities = 89/102 (87%) Strand = Plus / Plus Query: 225 ggggagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacata 284 |||||||| || || || ||||||| ||||||||| |||||||| ||| ||||| ||| Sbjct: 57 ggggagaaaggaataggcgatggaagtgtcagctacggaatggacgatagcgatgatata 116 Query: 285 tacatgcggtcatggactggcaccattattggtcctcacaat 326 |||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 117 tacatgcggtcatggactggtaccatcattggtcctcacaat 158
>emb|CT829706.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN011P14, full insert sequence Length = 766 Score = 95.6 bits (48), Expect = 3e-16 Identities = 111/132 (84%) Strand = Plus / Plus Query: 462 aagaagttcagtgtgctagcaaactggcagcgagagtacacaatggagcatgtcttgacc 521 ||||||||| | |||| |||||||||||| | |||||||| |||||| || || |||| Sbjct: 410 aagaagttccatatgctggcaaactggcagagggagtacaccatggagaatatcctgacg 469 Query: 522 cagctgaagaaagacatggcagcgacccagaaccgcaagctagtgcagcctccagaaggg 581 ||||||||||| || ||||| ||| | || | ||||||||| || ||||||||||||||| Sbjct: 470 cagctgaagaaggagatggccgcgccgcacagccgcaagctggttcagcctccagaaggg 529 Query: 582 acattcttctag 593 || ||||||||| Sbjct: 530 accttcttctag 541 Score = 63.9 bits (32), Expect = 9e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 287 catgcggtcatggactggcaccattattggtcctcacaatactgtccatgagggtcgcat 346 |||||| || ||||| ||||| || ||||| || | ||| |||| || ||||| ||||| Sbjct: 235 catgcgctcctggaccggcacaatcattggaccactcaactctgtgcacgaggggcgcat 294 Query: 347 ctaccagctgaagctgttttgtgacaaggactaccc 382 ||||||||||||||| || || |||||||||||||| Sbjct: 295 ctaccagctgaagctcttctgcgacaaggactaccc 330
>ref|NM_001060847.1| Oryza sativa (japonica cultivar-group) Os04g0684800 (Os04g0684800) mRNA, partial cds Length = 811 Score = 95.6 bits (48), Expect = 3e-16 Identities = 111/132 (84%) Strand = Plus / Plus Query: 462 aagaagttcagtgtgctagcaaactggcagcgagagtacacaatggagcatgtcttgacc 521 ||||||||| | |||| |||||||||||| | |||||||| |||||| || || |||| Sbjct: 327 aagaagttccatatgctggcaaactggcagagggagtacaccatggagaatatcctgacg 386 Query: 522 cagctgaagaaagacatggcagcgacccagaaccgcaagctagtgcagcctccagaaggg 581 ||||||||||| || ||||| ||| | || | ||||||||| || ||||||||||||||| Sbjct: 387 cagctgaagaaggagatggccgcgccgcacagccgcaagctggttcagcctccagaaggg 446 Query: 582 acattcttctag 593 || ||||||||| Sbjct: 447 accttcttctag 458 Score = 63.9 bits (32), Expect = 9e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 287 catgcggtcatggactggcaccattattggtcctcacaatactgtccatgagggtcgcat 346 |||||| || ||||| ||||| || ||||| || | ||| |||| || ||||| ||||| Sbjct: 152 catgcgctcctggaccggcacaatcattggaccactcaactctgtgcacgaggggcgcat 211 Query: 347 ctaccagctgaagctgttttgtgacaaggactaccc 382 ||||||||||||||| || || |||||||||||||| Sbjct: 212 ctaccagctgaagctcttctgcgacaaggactaccc 247
>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete sequence Length = 94152 Score = 95.6 bits (48), Expect = 3e-16 Identities = 111/132 (84%) Strand = Plus / Plus Query: 462 aagaagttcagtgtgctagcaaactggcagcgagagtacacaatggagcatgtcttgacc 521 ||||||||| | |||| |||||||||||| | |||||||| |||||| || || |||| Sbjct: 44174 aagaagttccatatgctggcaaactggcagagggagtacaccatggagaatatcctgacg 44233 Query: 522 cagctgaagaaagacatggcagcgacccagaaccgcaagctagtgcagcctccagaaggg 581 ||||||||||| || ||||| ||| | || | ||||||||| || ||||||||||||||| Sbjct: 44234 cagctgaagaaggagatggccgcgccgcacagccgcaagctggttcagcctccagaaggg 44293 Query: 582 acattcttctag 593 || ||||||||| Sbjct: 44294 accttcttctag 44305 Score = 61.9 bits (31), Expect = 4e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 336 gagggtcgcatctaccagctgaagctgttttgtgacaaggactaccc 382 ||||| |||||||||||||||||||| || || |||||||||||||| Sbjct: 43073 gaggggcgcatctaccagctgaagctcttctgcgacaaggactaccc 43119
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 95.6 bits (48), Expect = 3e-16 Identities = 111/132 (84%) Strand = Plus / Plus Query: 462 aagaagttcagtgtgctagcaaactggcagcgagagtacacaatggagcatgtcttgacc 521 ||||||||| | |||| |||||||||||| | |||||||| |||||| || || |||| Sbjct: 35012427 aagaagttccatatgctggcaaactggcagagggagtacaccatggagaatatcctgacg 35012486 Query: 522 cagctgaagaaagacatggcagcgacccagaaccgcaagctagtgcagcctccagaaggg 581 ||||||||||| || ||||| ||| | || | ||||||||| || ||||||||||||||| Sbjct: 35012487 cagctgaagaaggagatggccgcgccgcacagccgcaagctggttcagcctccagaaggg 35012546 Query: 582 acattcttctag 593 || ||||||||| Sbjct: 35012547 accttcttctag 35012558 Score = 61.9 bits (31), Expect = 4e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 336 gagggtcgcatctaccagctgaagctgttttgtgacaaggactaccc 382 ||||| |||||||||||||||||||| || || |||||||||||||| Sbjct: 35011325 gaggggcgcatctaccagctgaagctcttctgcgacaaggactaccc 35011371
>dbj|AK066799.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013077E20, full insert sequence Length = 813 Score = 95.6 bits (48), Expect = 3e-16 Identities = 111/132 (84%) Strand = Plus / Plus Query: 462 aagaagttcagtgtgctagcaaactggcagcgagagtacacaatggagcatgtcttgacc 521 ||||||||| | |||| |||||||||||| | |||||||| |||||| || || |||| Sbjct: 329 aagaagttccatatgctggcaaactggcagagggagtacaccatggagaatatcctgacg 388 Query: 522 cagctgaagaaagacatggcagcgacccagaaccgcaagctagtgcagcctccagaaggg 581 ||||||||||| || ||||| ||| | || | ||||||||| || ||||||||||||||| Sbjct: 389 cagctgaagaaggagatggccgcgccgcacagccgcaagctggttcagcctccagaaggg 448 Query: 582 acattcttctag 593 || ||||||||| Sbjct: 449 accttcttctag 460 Score = 63.9 bits (32), Expect = 9e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 287 catgcggtcatggactggcaccattattggtcctcacaatactgtccatgagggtcgcat 346 |||||| || ||||| ||||| || ||||| || | ||| |||| || ||||| ||||| Sbjct: 154 catgcgctcctggaccggcacaatcattggaccactcaactctgtgcacgaggggcgcat 213 Query: 347 ctaccagctgaagctgttttgtgacaaggactaccc 382 ||||||||||||||| || || |||||||||||||| Sbjct: 214 ctaccagctgaagctcttctgcgacaaggactaccc 249
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 95.6 bits (48), Expect = 3e-16 Identities = 111/132 (84%) Strand = Plus / Plus Query: 462 aagaagttcagtgtgctagcaaactggcagcgagagtacacaatggagcatgtcttgacc 521 ||||||||| | |||| |||||||||||| | |||||||| |||||| || || |||| Sbjct: 71477 aagaagttccatatgctggcaaactggcagagggagtacaccatggagaatatcctgacg 71536 Query: 522 cagctgaagaaagacatggcagcgacccagaaccgcaagctagtgcagcctccagaaggg 581 ||||||||||| || ||||| ||| | || | ||||||||| || ||||||||||||||| Sbjct: 71537 cagctgaagaaggagatggccgcgccgcacagccgcaagctggttcagcctccagaaggg 71596 Query: 582 acattcttctag 593 || ||||||||| Sbjct: 71597 accttcttctag 71608 Score = 61.9 bits (31), Expect = 4e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 336 gagggtcgcatctaccagctgaagctgttttgtgacaaggactaccc 382 ||||| |||||||||||||||||||| || || |||||||||||||| Sbjct: 70375 gaggggcgcatctaccagctgaagctcttctgcgacaaggactaccc 70421
>emb|CT986910.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 488 Score = 93.7 bits (47), Expect = 1e-15 Identities = 107/127 (84%) Strand = Plus / Plus Query: 297 tggactggcaccattattggtcctcacaatactgtccatgagggtcgcatctaccagctg 356 ||||||||||| || |||||||||||||||||||| ||||| ||||| ||||||||| || Sbjct: 16 tggactggcacaatcattggtcctcacaatactgtacatgaaggtcgtatctaccagttg 75 Query: 357 aagctgttttgtgacaaggactaccctgagaaggcaccatctgttagattccattcaaga 416 |||||||| || ||||| || ||||| || ||| |||| ||||| | || |||||| | Sbjct: 76 aagctgttctgcgacaaagattacccggaaaagccacccactgttcgttttcattcacgc 135 Query: 417 atcaaca 423 ||||||| Sbjct: 136 atcaaca 142
>gb|AC189492.1| Brassica rapa subsp. pekinensis clone KBrB084M08, complete sequence Length = 129722 Score = 77.8 bits (39), Expect = 6e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 208 tagaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatgg 267 ||||||||||||| | || ||||| || || ||||| || || |||||||||||||||| Sbjct: 50223 tagaagagcttgaaagaggtgagaaaggtatcggagacggtaccgtcagctatggaatgg 50282 Query: 268 atgatgctgatgacatatacatgcggtcatggactggcaccattattggtcctca 322 |||||||||| || || ||||| || |||||||||||||| ||||||||||| Sbjct: 50283 atgatgctgacgatattctcatgcaatcttggactggcaccatcattggtcctca 50337
>ref|NM_105734.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme (AT1G70660) mRNA, complete cds Length = 838 Score = 77.8 bits (39), Expect = 6e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 228 gagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatac 287 ||||| || ||||||||||| || || || ||||||||||||||||||||||| || | Sbjct: 230 gagaaaggaattggagatgggacagtgagttatggaatggatgatgctgatgatattttg 289 Query: 288 atgcggtcatggactggcaccattattggtcctcacaatactg 330 |||| || |||||||| |||||| |||||||||| ||||||| Sbjct: 290 atgcaatcttggactggtaccattcttggtcctcataatactg 332
>gb|AY088344.1| Arabidopsis thaliana clone 5821 mRNA, complete sequence Length = 815 Score = 77.8 bits (39), Expect = 6e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 228 gagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatac 287 ||||| || ||||||||||| || || || ||||||||||||||||||||||| || | Sbjct: 207 gagaaaggaattggagatgggacagtgagttatggaatggatgatgctgatgatattttg 266 Query: 288 atgcggtcatggactggcaccattattggtcctcacaatactg 330 |||| || |||||||| |||||| |||||||||| ||||||| Sbjct: 267 atgcaatcttggactggtaccattcttggtcctcataatactg 309
>gb|BT004943.1| Arabidopsis thaliana clone U20398 putative E2, ubiquitin-conjugating enzyme (At1g70660) mRNA, complete cds Length = 511 Score = 77.8 bits (39), Expect = 6e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 228 gagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatac 287 ||||| || ||||||||||| || || || ||||||||||||||||||||||| || | Sbjct: 70 gagaaaggaattggagatgggacagtgagttatggaatggatgatgctgatgatattttg 129 Query: 288 atgcggtcatggactggcaccattattggtcctcacaatactg 330 |||| || |||||||| |||||| |||||||||| ||||||| Sbjct: 130 atgcaatcttggactggtaccattcttggtcctcataatactg 172
>gb|BT004011.1| Arabidopsis thaliana clone RAFL14-86-C24 (R20398) putative E2, ubiquitin-conjugating enzyme (At1g70660) mRNA, complete cds Length = 827 Score = 77.8 bits (39), Expect = 6e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 228 gagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatac 287 ||||| || ||||||||||| || || || ||||||||||||||||||||||| || | Sbjct: 215 gagaaaggaattggagatgggacagtgagttatggaatggatgatgctgatgatattttg 274 Query: 288 atgcggtcatggactggcaccattattggtcctcacaatactg 330 |||| || |||||||| |||||| |||||||||| ||||||| Sbjct: 275 atgcaatcttggactggtaccattcttggtcctcataatactg 317
>gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A18 genomic sequence, complete sequence Length = 108582 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 228 gagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatac 287 ||||| || ||||||||||| || || || ||||||||||||||||||||||| || | Sbjct: 63589 gagaaaggaattggagatgggacagtgagttatggaatggatgatgctgatgatattttg 63530 Query: 288 atgcggtcatggactggcaccattattggtcctca 322 |||| || |||||||| |||||| |||||||||| Sbjct: 63529 atgcaatcttggactggtaccattcttggtcctca 63495
>gb|DQ455302.1| Medicago truncatula cDNA-AFLP fragment BT12M22_236 sequence Length = 215 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 480 gcaaactggcagcgagagtacacaatggagcatgtcttgacccagctgaagaaagacatg 539 ||||| ||||| ||||||||| |||||| || | ||||||||||||||||||| ||| Sbjct: 170 gcaaattggcaaagagagtacagcatggaggatatactgacccagctgaagaaagaaatg 111 Query: 540 gcagcgacccagaaccgcaagctagtgcagcctccagaagg 580 ||||| | || ||||| ||||| || |||||||||||||| Sbjct: 110 gcagcccctcataaccggaagcttgtccagcctccagaagg 70
>gb|AY062935.1| Chlamydomonas reinhardtii ubiquitin-conjugating enzyme E2 isoform (UBCX) mRNA, complete cds Length = 1007 Score = 58.0 bits (29), Expect = 6e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 197 cttcaggctgctagaagagcttgagcgcggggagaagggcattggagatggaactgt 253 |||||||||||| || ||||| || ||||| ||||||||| |||| ||||||||||| Sbjct: 94 cttcaggctgctggaggagctggatcgcggcgagaagggctttggtgatggaactgt 150
>emb|AM411042.1| Trifolium pratense AFLP fragment rc0115 Length = 288 Score = 52.0 bits (26), Expect = 0.003 Identities = 53/62 (85%) Strand = Plus / Minus Query: 519 acccagctgaagaaagacatggcagcgacccagaaccgcaagctagtgcagcctccagaa 578 |||||| |||||||||| |||||| | |||| ||||| ||||| || |||||||||||| Sbjct: 170 acccaggtgaagaaagaaatggcatctccccataaccgaaagcttgtccagcctccagaa 111 Query: 579 gg 580 || Sbjct: 110 gg 109
>emb|AJ617084.1| Nicotiana plumbaginifolia cDNA-AFLP fragment, clone Np285 Length = 346 Score = 50.1 bits (25), Expect = 0.014 Identities = 28/29 (96%) Strand = Plus / Minus Query: 480 gcaaactggcagcgagagtacacaatgga 508 ||||| ||||||||||||||||||||||| Sbjct: 286 gcaaattggcagcgagagtacacaatgga 258
>emb|BX323550.13| Zebrafish DNA sequence from clone DKEYP-70F9 in linkage group 22, complete sequence Length = 200031 Score = 46.1 bits (23), Expect = 0.21 Identities = 26/27 (96%) Strand = Plus / Minus Query: 837 aaatataatatgtgtttgcgtgtgtgc 863 ||||||||||||||| ||||||||||| Sbjct: 120280 aaatataatatgtgtgtgcgtgtgtgc 120254
>emb|BX927096.16| Zebrafish DNA sequence from clone CH211-262J3 in linkage group 22, complete sequence Length = 72993 Score = 46.1 bits (23), Expect = 0.21 Identities = 26/27 (96%) Strand = Plus / Minus Query: 837 aaatataatatgtgtttgcgtgtgtgc 863 ||||||||||||||| ||||||||||| Sbjct: 55672 aaatataatatgtgtgtgcgtgtgtgc 55646
>gb|DQ267678.1| Tricholoma vaccinum isolate GK6514 ubiquitin-conjugating enzyme variant MMS2-like mRNA, partial sequence Length = 229 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Minus Query: 238 ttggagatggaactgtcagctatggaatgga 268 |||| ||||| |||||||||||||||||||| Sbjct: 46 ttggtgatgggactgtcagctatggaatgga 16
>ref|XM_806496.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510173.80) partial mRNA Length = 1143 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Plus Query: 95 ccccactctccctcgatcggatccgc 120 |||||||||||| ||||||||||||| Sbjct: 787 ccccactctcccacgatcggatccgc 812
>ref|XM_803144.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509721.50) partial mRNA Length = 1137 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Plus Query: 95 ccccactctccctcgatcggatccgc 120 |||||||||||| ||||||||||||| Sbjct: 781 ccccactctcccacgatcggatccgc 806
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.84 Identities = 22/22 (100%) Strand = Plus / Plus Query: 116 tccgcccgcccgccgcgccggt 137 |||||||||||||||||||||| Sbjct: 5238057 tccgcccgcccgccgcgccggt 5238078
>ref|NM_001065293.1| Oryza sativa (japonica cultivar-group) Os07g0115700 (Os07g0115700) mRNA, complete cds Length = 8463 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 842 taatatgtgtttgcgtgtgtg 862 ||||||||||||||||||||| Sbjct: 6355 taatatgtgtttgcgtgtgtg 6335
>gb|AC146508.3| Pan troglodytes BAC clone RP43-172A15 from 7, complete sequence Length = 208067 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 566 gcagcctccagaagggacatt 586 ||||||||||||||||||||| Sbjct: 72427 gcagcctccagaagggacatt 72407
>gb|AC163393.6| Mus musculus chromosome 15, clone RP24-224P8, complete sequence Length = 167152 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 405 ttccattcaagaatcaacatggctt 429 ||||||||||||||||| ||||||| Sbjct: 107865 ttccattcaagaatcaaaatggctt 107889
>gb|AC107775.9| Mus musculus chromosome 15, clone RP23-93N2, complete sequence Length = 169604 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 405 ttccattcaagaatcaacatggctt 429 ||||||||||||||||| ||||||| Sbjct: 157774 ttccattcaagaatcaaaatggctt 157750
>ref|XM_627982.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd1_1400), partial mRNA Length = 2889 Score = 42.1 bits (21), Expect = 3.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 695 tcttttcccagttttatgtgaaacctgtt 723 |||||||||||||||||| ||||| |||| Sbjct: 1380 tcttttcccagttttatgcgaaacatgtt 1408
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ctttccccacgcgcaggcgat 73 ||||||||||||||||||||| Sbjct: 4301146 ctttccccacgcgcaggcgat 4301126
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 842 taatatgtgtttgcgtgtgtg 862 ||||||||||||||||||||| Sbjct: 863463 taatatgtgtttgcgtgtgtg 863483
>emb|AL359458.17| Human DNA sequence from clone RP11-719J20 on chromosome 6, complete sequence Length = 96151 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 833 aaggaaatataatatgtgttt 853 ||||||||||||||||||||| Sbjct: 2715 aaggaaatataatatgtgttt 2735
>gb|AC034268.4| Homo sapiens chromosome 17, clone RP11-312B18, complete sequence Length = 198935 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 679 gtctgctgcctgcagatcttt 699 ||||||||||||||||||||| Sbjct: 48295 gtctgctgcctgcagatcttt 48275
>dbj|AP005486.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1138_B05 Length = 113982 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 842 taatatgtgtttgcgtgtgtg 862 ||||||||||||||||||||| Sbjct: 62219 taatatgtgtttgcgtgtgtg 62239
>emb|AL670943.14| Mouse DNA sequence from clone RP23-233G6 on chromosome X, complete sequence Length = 197148 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 tgaagctgttttgtgacaagg 375 ||||||||||||||||||||| Sbjct: 74468 tgaagctgttttgtgacaagg 74488 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 146,802,433 Number of extensions: 8330862 Number of successful extensions: 156365 Number of sequences better than 10.0: 89 Number of HSP's gapped: 156349 Number of HSP's successfully gapped: 123 Length of query: 882 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 860 Effective length of database: 18,508,616,841 Effective search space: 15917410483260 Effective search space used: 15917410483260 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
