| Clone Name | FLbaf69m08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001050870.1| Oryza sativa (japonica cultivar-group) Os01g0763600 (Os01g0763600) mRNA, complete cds Length = 1616 Score = 1049 bits (529), Expect = 0.0 Identities = 979/1129 (86%) Strand = Plus / Plus Query: 234 ttttcttcttctgctactattacatgtggccattgctagaccattctttccactgccaag 293 |||||||||| ||||||| |||||||| || |||||||| |||||||||| ||||| Sbjct: 213 ttttcttcttttgctacttccacatgtggttttttctagaccactctttccactaccaag 272 Query: 294 taagactagtaatgaagagaagaagccaatacagacatttcgaccgtataatattgctca 353 |||| || | |||||||| || |||| || |||||||| ||||| |||||||| Sbjct: 273 caagagtaatggaatagagaagagacccttacaaacttttcgaccatataacattgctca 332 Query: 354 ccgtggctcaaatggggaaatcccggaggaaacaagtgctgcttacctgagggctattga 413 ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||| Sbjct: 333 ccgtggctcaaatggggaaattcctgaggaaacagctgctgcttacctgagggctattga 392 Query: 414 agaaggtgcagattttatagagactgacatccttgctagcaaagatggtgcattgatctg 473 ||||||||| ||||||||||| || ||||||||||||||||||||||| || |||||||| Sbjct: 393 agaaggtgcggattttatagaaacggacatccttgctagcaaagatggggccttgatctg 452 Query: 474 ctttcatgatgtgacacttgatgatacaactgatatttccgtccataaggagttcgccaa 533 |||||||||||| ||||| |||| ||||||||| || || || |||||||| |||| Sbjct: 453 ctttcatgatgtaacactggatgctacaactgacgttgccagccgcaaggagttttccaa 512 Query: 534 tcgaaggagaacctacgaggtggaatgggccaacgttactggctggtttgtagtggattt 593 | |||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| || Sbjct: 513 tagaagaagaacctacgaggtggaatggttcaacgctactggctggtttgtagtggactt 572 Query: 594 cacgcttgaggaacttaaaacacttaaagtgaagcagcgatacccattcagagatcaaca 653 ||| |||||||||||||||||||| ||||| || |||||||||||||||||||| ||||| Sbjct: 573 cacacttgaggaacttaaaacactgaaagtcaatcagcgatacccattcagagaccaaca 632 Query: 654 atataatggcaaattttcaatcatcacatttgaagaattcatttcaattgccttagatgc 713 ||| |||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 633 atacaatggcaagttttcaattatcacatttgaagaattcatttctattgccttggatgc 692 Query: 714 aagcagaaccgttggaatatatccagagataaaagatccagtttttatcaacaagcacgt 773 ||||||||| || |||||||| |||||||| |||||||||||||||||||||||||| || Sbjct: 693 aagcagaactgtcggaatatacccagagatgaaagatccagtttttatcaacaagcatgt 752 Query: 774 aaagtgggcagatggaaagaagtttgaggacaaatttgtggataccttactaaagtacgg 833 ||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 753 caagtgggatggtgggaagaagtttgaggacaaatttgtggataccttactgaagtatgg 812 Query: 834 atacaggggtcaatatatgtccgaaaattggctaaaacagccattgtttatacaatcatt 893 ||| | || ||||||||||| ||||||||||| || ||||| |||||||||||||| || Sbjct: 813 atataaaggccaatatatgtcagaaaattggctgaagcagccgttgtttatacaatcttt 872 Query: 894 tgctccctcttcccttgtacatgtatcaaagttgacagactctccgaagatctttctgat 953 |||||| ||||||||||||||| ||||||||||||||||||||| ||||| || ||||| Sbjct: 873 tgctcctacttcccttgtacatgcatcaaagttgacagactctcccaagatattcctgat 932 Query: 954 tgatgatatcacagtgagaacacaagacacaaaccagtcatactcggaaatcacttcaga 1013 ||| ||| || |||||||||||||||| |||||||||||||||| ||| |||||||| || Sbjct: 933 tgacgatttctcagtgagaacacaagatacaaaccagtcatactgggacatcacttctga 992 Query: 1014 tgactaccttgcatatattagtaactatgttgtcggcctcggcccgtggaaagatactat 1073 ||||||||| ||||||||||||||||||||||| ||||| || || ||||||||||| | Sbjct: 993 tgactacctagcatatattagtaactatgttgttggccttggtccatggaaagatacggt 1052 Query: 1074 tgttccagttgcaaaaaactatatgctggaaccaactgatcttgttgcaagagcgcatgc 1133 |||||||| || |||||||||| | ||| ||| |||||||||||||||||||| ||||| Sbjct: 1053 tgttccagcagccaaaaactatacgatggcaccgactgatcttgttgcaagagcacatgc 1112 Query: 1134 tcataatctgcaggtacacccttacacatacaggaacgagaaccagtttctgcacttcaa 1193 ||||||||| ||||||||||| ||||||||||||||||||||||| || |||||| |||| Sbjct: 1113 tcataatcttcaggtacacccgtacacatacaggaacgagaaccaattcctgcacctcaa 1172 Query: 1194 cttccatcaggatccctatgccgagtacgatttctggataaatacggtgggggttgacgg 1253 |||||||||||| || ||||| ||||| |||||||||||||| | ||||||| || || Sbjct: 1173 cttccatcaggacccttatgctgagtatgatttctggataaacagcatgggggtcgatgg 1232 Query: 1254 attattcacagatttcgctggaagcgtacaccagtaccaagaactgaaaaccccacaccc 1313 ||| ||||| |||||| ||||| | | |||| ||||| |||||| | | ||||| | Sbjct: 1233 attgttcactgatttcactggatccctgcaccgttaccaggaactggtagctccacatgc 1292 Query: 1314 gaaggacgcaaccgcgagcagcctcctactaaaaattgctcagatgatc 1362 |||||| | ||| || | |||||||||| ||||||||||||| |||||| Sbjct: 1293 gaaggatgaaactgcaaacagcctcctagtaaaaattgctcaaatgatc 1341
>dbj|AK066596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070K24, full insert sequence Length = 1618 Score = 1049 bits (529), Expect = 0.0 Identities = 979/1129 (86%) Strand = Plus / Plus Query: 234 ttttcttcttctgctactattacatgtggccattgctagaccattctttccactgccaag 293 |||||||||| ||||||| |||||||| || |||||||| |||||||||| ||||| Sbjct: 214 ttttcttcttttgctacttccacatgtggttttttctagaccactctttccactaccaag 273 Query: 294 taagactagtaatgaagagaagaagccaatacagacatttcgaccgtataatattgctca 353 |||| || | |||||||| || |||| || |||||||| ||||| |||||||| Sbjct: 274 caagagtaatggaatagagaagagacccttacaaacttttcgaccatataacattgctca 333 Query: 354 ccgtggctcaaatggggaaatcccggaggaaacaagtgctgcttacctgagggctattga 413 ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||| Sbjct: 334 ccgtggctcaaatggggaaattcctgaggaaacagctgctgcttacctgagggctattga 393 Query: 414 agaaggtgcagattttatagagactgacatccttgctagcaaagatggtgcattgatctg 473 ||||||||| ||||||||||| || ||||||||||||||||||||||| || |||||||| Sbjct: 394 agaaggtgcggattttatagaaacggacatccttgctagcaaagatggggccttgatctg 453 Query: 474 ctttcatgatgtgacacttgatgatacaactgatatttccgtccataaggagttcgccaa 533 |||||||||||| ||||| |||| ||||||||| || || || |||||||| |||| Sbjct: 454 ctttcatgatgtaacactggatgctacaactgacgttgccagccgcaaggagttttccaa 513 Query: 534 tcgaaggagaacctacgaggtggaatgggccaacgttactggctggtttgtagtggattt 593 | |||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| || Sbjct: 514 tagaagaagaacctacgaggtggaatggttcaacgctactggctggtttgtagtggactt 573 Query: 594 cacgcttgaggaacttaaaacacttaaagtgaagcagcgatacccattcagagatcaaca 653 ||| |||||||||||||||||||| ||||| || |||||||||||||||||||| ||||| Sbjct: 574 cacacttgaggaacttaaaacactgaaagtcaatcagcgatacccattcagagaccaaca 633 Query: 654 atataatggcaaattttcaatcatcacatttgaagaattcatttcaattgccttagatgc 713 ||| |||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 634 atacaatggcaagttttcaattatcacatttgaagaattcatttctattgccttggatgc 693 Query: 714 aagcagaaccgttggaatatatccagagataaaagatccagtttttatcaacaagcacgt 773 ||||||||| || |||||||| |||||||| |||||||||||||||||||||||||| || Sbjct: 694 aagcagaactgtcggaatatacccagagatgaaagatccagtttttatcaacaagcatgt 753 Query: 774 aaagtgggcagatggaaagaagtttgaggacaaatttgtggataccttactaaagtacgg 833 ||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 754 caagtgggatggtgggaagaagtttgaggacaaatttgtggataccttactgaagtatgg 813 Query: 834 atacaggggtcaatatatgtccgaaaattggctaaaacagccattgtttatacaatcatt 893 ||| | || ||||||||||| ||||||||||| || ||||| |||||||||||||| || Sbjct: 814 atataaaggccaatatatgtcagaaaattggctgaagcagccgttgtttatacaatcttt 873 Query: 894 tgctccctcttcccttgtacatgtatcaaagttgacagactctccgaagatctttctgat 953 |||||| ||||||||||||||| ||||||||||||||||||||| ||||| || ||||| Sbjct: 874 tgctcctacttcccttgtacatgcatcaaagttgacagactctcccaagatattcctgat 933 Query: 954 tgatgatatcacagtgagaacacaagacacaaaccagtcatactcggaaatcacttcaga 1013 ||| ||| || |||||||||||||||| |||||||||||||||| ||| |||||||| || Sbjct: 934 tgacgatttctcagtgagaacacaagatacaaaccagtcatactgggacatcacttctga 993 Query: 1014 tgactaccttgcatatattagtaactatgttgtcggcctcggcccgtggaaagatactat 1073 ||||||||| ||||||||||||||||||||||| ||||| || || ||||||||||| | Sbjct: 994 tgactacctagcatatattagtaactatgttgttggccttggtccatggaaagatacggt 1053 Query: 1074 tgttccagttgcaaaaaactatatgctggaaccaactgatcttgttgcaagagcgcatgc 1133 |||||||| || |||||||||| | ||| ||| |||||||||||||||||||| ||||| Sbjct: 1054 tgttccagcagccaaaaactatacgatggcaccgactgatcttgttgcaagagcacatgc 1113 Query: 1134 tcataatctgcaggtacacccttacacatacaggaacgagaaccagtttctgcacttcaa 1193 ||||||||| ||||||||||| ||||||||||||||||||||||| || |||||| |||| Sbjct: 1114 tcataatcttcaggtacacccgtacacatacaggaacgagaaccaattcctgcacctcaa 1173 Query: 1194 cttccatcaggatccctatgccgagtacgatttctggataaatacggtgggggttgacgg 1253 |||||||||||| || ||||| ||||| |||||||||||||| | ||||||| || || Sbjct: 1174 cttccatcaggacccttatgctgagtatgatttctggataaacagcatgggggtcgatgg 1233 Query: 1254 attattcacagatttcgctggaagcgtacaccagtaccaagaactgaaaaccccacaccc 1313 ||| ||||| |||||| ||||| | | |||| ||||| |||||| | | ||||| | Sbjct: 1234 attgttcactgatttcactggatccctgcaccgttaccaggaactggtagctccacatgc 1293 Query: 1314 gaaggacgcaaccgcgagcagcctcctactaaaaattgctcagatgatc 1362 |||||| | ||| || | |||||||||| ||||||||||||| |||||| Sbjct: 1294 gaaggatgaaactgcaaacagcctcctagtaaaaattgctcaaatgatc 1342
>dbj|AK061563.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-E04, full insert sequence Length = 1400 Score = 1049 bits (529), Expect = 0.0 Identities = 979/1129 (86%) Strand = Plus / Plus Query: 234 ttttcttcttctgctactattacatgtggccattgctagaccattctttccactgccaag 293 |||||||||| ||||||| |||||||| || |||||||| |||||||||| ||||| Sbjct: 170 ttttcttcttttgctacttccacatgtggttttttctagaccactctttccactaccaag 229 Query: 294 taagactagtaatgaagagaagaagccaatacagacatttcgaccgtataatattgctca 353 |||| || | |||||||| || |||| || |||||||| ||||| |||||||| Sbjct: 230 caagagtaatggaatagagaagagacccttacaaacttttcgaccatataacattgctca 289 Query: 354 ccgtggctcaaatggggaaatcccggaggaaacaagtgctgcttacctgagggctattga 413 ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||| Sbjct: 290 ccgtggctcaaatggggaaattcctgaggaaacagctgctgcttacctgagggctattga 349 Query: 414 agaaggtgcagattttatagagactgacatccttgctagcaaagatggtgcattgatctg 473 ||||||||| ||||||||||| || ||||||||||||||||||||||| || |||||||| Sbjct: 350 agaaggtgcggattttatagaaacggacatccttgctagcaaagatggggccttgatctg 409 Query: 474 ctttcatgatgtgacacttgatgatacaactgatatttccgtccataaggagttcgccaa 533 |||||||||||| ||||| |||| ||||||||| || || || |||||||| |||| Sbjct: 410 ctttcatgatgtaacactggatgctacaactgacgttgccagccgcaaggagttttccaa 469 Query: 534 tcgaaggagaacctacgaggtggaatgggccaacgttactggctggtttgtagtggattt 593 | |||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| || Sbjct: 470 tagaagaagaacctacgaggtggaatggttcaacgctactggctggtttgtagtggactt 529 Query: 594 cacgcttgaggaacttaaaacacttaaagtgaagcagcgatacccattcagagatcaaca 653 ||| |||||||||||||||||||| ||||| || |||||||||||||||||||| ||||| Sbjct: 530 cacacttgaggaacttaaaacactgaaagtcaatcagcgatacccattcagagaccaaca 589 Query: 654 atataatggcaaattttcaatcatcacatttgaagaattcatttcaattgccttagatgc 713 ||| |||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 590 atacaatggcaagttttcaattatcacatttgaagaattcatttctattgccttggatgc 649 Query: 714 aagcagaaccgttggaatatatccagagataaaagatccagtttttatcaacaagcacgt 773 ||||||||| || |||||||| |||||||| |||||||||||||||||||||||||| || Sbjct: 650 aagcagaactgtcggaatatacccagagatgaaagatccagtttttatcaacaagcatgt 709 Query: 774 aaagtgggcagatggaaagaagtttgaggacaaatttgtggataccttactaaagtacgg 833 ||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 710 caagtgggatggtgggaagaagtttgaggacaaatttgtggataccttactgaagtatgg 769 Query: 834 atacaggggtcaatatatgtccgaaaattggctaaaacagccattgtttatacaatcatt 893 ||| | || ||||||||||| ||||||||||| || ||||| |||||||||||||| || Sbjct: 770 atataaaggccaatatatgtcagaaaattggctgaagcagccgttgtttatacaatcttt 829 Query: 894 tgctccctcttcccttgtacatgtatcaaagttgacagactctccgaagatctttctgat 953 |||||| ||||||||||||||| ||||||||||||||||||||| ||||| || ||||| Sbjct: 830 tgctcctacttcccttgtacatgcatcaaagttgacagactctcccaagatattcctgat 889 Query: 954 tgatgatatcacagtgagaacacaagacacaaaccagtcatactcggaaatcacttcaga 1013 ||| ||| || |||||||||||||||| |||||||||||||||| ||| |||||||| || Sbjct: 890 tgacgatttctcagtgagaacacaagatacaaaccagtcatactgggacatcacttctga 949 Query: 1014 tgactaccttgcatatattagtaactatgttgtcggcctcggcccgtggaaagatactat 1073 ||||||||| ||||||||||||||||||||||| ||||| || || ||||||||||| | Sbjct: 950 tgactacctagcatatattagtaactatgttgttggccttggtccatggaaagatacggt 1009 Query: 1074 tgttccagttgcaaaaaactatatgctggaaccaactgatcttgttgcaagagcgcatgc 1133 |||||||| || |||||||||| | ||| ||| |||||||||||||||||||| ||||| Sbjct: 1010 tgttccagcagccaaaaactatacgatggcaccgactgatcttgttgcaagagcacatgc 1069 Query: 1134 tcataatctgcaggtacacccttacacatacaggaacgagaaccagtttctgcacttcaa 1193 ||||||||| ||||||||||| ||||||||||||||||||||||| || |||||| |||| Sbjct: 1070 tcataatcttcaggtacacccgtacacatacaggaacgagaaccaattcctgcacctcaa 1129 Query: 1194 cttccatcaggatccctatgccgagtacgatttctggataaatacggtgggggttgacgg 1253 |||||||||||| || ||||| ||||| |||||||||||||| | ||||||| || || Sbjct: 1130 cttccatcaggacccttatgctgagtatgatttctggataaacagcatgggggtcgatgg 1189 Query: 1254 attattcacagatttcgctggaagcgtacaccagtaccaagaactgaaaaccccacaccc 1313 ||| ||||| |||||| ||||| | | |||| ||||| |||||| | | ||||| | Sbjct: 1190 attgttcactgatttcactggatccctgcaccgttaccaggaactggtagctccacatgc 1249 Query: 1314 gaaggacgcaaccgcgagcagcctcctactaaaaattgctcagatgatc 1362 |||||| | ||| || | |||||||||| ||||||||||||| |||||| Sbjct: 1250 gaaggatgaaactgcaaacagcctcctagtaaaaattgctcaaatgatc 1298
>gb|AY104313.1| Zea mays PCO093744 mRNA sequence Length = 1823 Score = 884 bits (446), Expect = 0.0 Identities = 965/1138 (84%) Strand = Plus / Plus Query: 239 ttcttctgctactattacatgtggccattgctagaccattctttccactgccaagtaaga 298 |||||||||||||||||||| |||| |||||||||| ||||||| || || ||||||| Sbjct: 250 ttcttctgctactattacatttggcatttgctagacctctctttcctctaccgagtaaga 309 Query: 299 ctagtaatgaagagaagaagccaatacagacatttcgaccgtataatattgctcaccgtg 358 | | ||||||||||||||||| |||||||| ||||| || ||||| |||||||| |||| Sbjct: 310 caaagaatgaagagaagaagcccatacagacgtttcggccatataacattgctcatcgtg 369 Query: 359 gctcaaatggggaaatcccggaggaaacaagtgctgcttacctgagggctattgaagaag 418 | |||||||||||||| || ||||||||| |||||| ||| |||| ||||||||||||| Sbjct: 370 gatcaaatggggaaattcccgaggaaacagctgctgcatacatgagagctattgaagaag 429 Query: 419 gtgcagattttatagagactgacatccttgctagcaaagatggtgcattgatctgctttc 478 | || |||||||||||| ||||||||||||||||||||||||| || ||||| || |||| Sbjct: 430 gggcggattttatagagtctgacatccttgctagcaaagatggggccttgatttgttttc 489 Query: 479 atgatgtgacacttgatgatacaactgatatttccgtccataaggagttcgccaatcgaa 538 ||||||| ||||||||||||||||||||| || || | |||||| || |||||||||| Sbjct: 490 atgatgtaacacttgatgatacaactgatgttgccaagcgtaaggaatttgccaatcgaa 549 Query: 539 ggagaacctacgaggtggaatgggccaacgttactggctggtttgtagtggatttcacgc 598 | |||||||| || ||||| ||| || |||||||| |||||||||||||| ||||| | Sbjct: 550 gaagaacctatgaagtggagtggtttaatgttactggatggtttgtagtggacttcacac 609 Query: 599 ttgaggaacttaaaacacttaaagtgaagcagcgatacccattcagagatcaacaatata 658 | ||||||||||||||||||| |||||||||| ||||| | || |||||||||||||| | Sbjct: 610 tggaggaacttaaaacacttagagtgaagcagagatactcgtttagagatcaacaataca 669 Query: 659 atggcaaattttcaatcatcacatttgaagaattcatttcaattgccttagatgcaagca 718 |||| | |||||||||||||| |||||||||||||||||||||||| |||||||| || Sbjct: 670 atggtatgttttcaatcatcacgtttgaagaattcatttcaattgccctagatgcagaca 729 Query: 719 gaaccgttggaatatatccagagataaaagatccagtttttatcaacaagcacgtaaagt 778 |||| || || |||||||| ||||| |||||||||||||||||||||||||| || |||| Sbjct: 730 gaactgtcggcatatatcccgagattaaagatccagtttttatcaacaagcatgtcaagt 789 Query: 779 gggcagatggaaagaagtttgaggacaaatttgtggataccttactaaagtacggataca 838 |||| ||||| |||||||||||||||||||||||||||||||| || || || ||||||| Sbjct: 790 gggctgatgggaagaagtttgaggacaaatttgtggataccttgcttaaatatggataca 849 Query: 839 ggggtcaatatatgtccgaaaattggctaaaacagccattgtttatacaatcatttgctc 898 |||||||||||||| || |||||||| || |||||||||||||||||||| ||||||| Sbjct: 850 aaggtcaatatatgtcagagaattggctgaagcagccattgtttatacaatcctttgctc 909 Query: 899 cctcttcccttgtacatgtatcaaagttgacagactctccgaagatctttctgattgatg 958 || | ||| |||||||||||||| | || | |||||||| ||| | ||| ||||||||| Sbjct: 910 ccacctccattgtacatgtatcagattttattgactctcccaaggtatttttgattgatg 969 Query: 959 atatcacagtgagaacacaagacacaaaccagtcatactcggaaatcacttcagatgact 1018 |||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||||||| Sbjct: 970 atatcagtgtgagaacacaagacacgaaccagtcatactgggaaattacttcagatgact 1029 Query: 1019 accttgcatatattagtaactatgttgtcggcctcggcccgtggaaagatactattgttc 1078 |||||||||| |||||||| ||||| || ||||| || || ||||| || |||||||||| Sbjct: 1030 accttgcatacattagtaaatatgtcgttggccttggtccatggaaggacactattgttc 1089 Query: 1079 cagttgcaaaaaactatatgctggaaccaactgatcttgttgcaagagcgcatgctcata 1138 ||| | || |||||| || || ||| | ||||||||| ||| | || |||||||||| Sbjct: 1090 cagcttcaggaaactacttgatgccacctagtgatcttgtcgcacgggcacatgctcata 1149 Query: 1139 atctgcaggtacacccttacacatacaggaacgagaaccagtttctgcacttcaacttcc 1198 |||| |||||||| || ||||| |||||||||||||||||||| |||||||||||||| Sbjct: 1150 atctccaggtacatccatacacgtacaggaacgagaaccagttcctgcacttcaactttt 1209 Query: 1199 atcaggatccctatgccgagtacgatttctggataaatacggtgggggttgacggattat 1258 ||| |||||||| || ||||| ||||||||||| || ||||||||||| ||| | | Sbjct: 1210 ttcaagatccctacaatgaatacgacttctggataaacactgtgggggttgatggactgt 1269 Query: 1259 tcacagatttcgctggaagcgtacaccagtaccaagaactgaaaaccccacacccgaagg 1318 | ||||||||| | |||| | | ||| |||||||||| ||| | ||||||||| ||||| Sbjct: 1270 ttacagatttcaccggaacccttcacaggtaccaagaattgacatccccacaccggaagg 1329 Query: 1319 acgcaaccgcgagcagcctcctactaaaaattgctcagatgatcgcagcatacgaagg 1376 | | || || | ||||||||| |||||||| || |||||| ||||||| ||||| Sbjct: 1330 atgagactgcaaatagcctcctagtaaaaattagccaaatgatctcagcatatgaagg 1387
>emb|CT829740.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA236G20, full insert sequence Length = 2203 Score = 757 bits (382), Expect = 0.0 Identities = 679/778 (87%) Strand = Plus / Plus Query: 585 agtggatttcacgcttgaggaacttaaaacacttaaagtgaagcagcgatacccattcag 644 |||||| ||||| |||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct: 1324 agtggacttcacacttgaggaacttaaaacactgaaagtcaatcagcgatacccattcag 1383 Query: 645 agatcaacaatataatggcaaattttcaatcatcacatttgaagaattcatttcaattgc 704 ||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| ||||| Sbjct: 1384 agaccaacaatacaatggcaagttttcaattatcacatttgaagaattcatttctattgc 1443 Query: 705 cttagatgcaagcagaaccgttggaatatatccagagataaaagatccagtttttatcaa 764 ||| |||||||||||||| || |||||||| |||||||| |||||||||||||||||||| Sbjct: 1444 cttggatgcaagcagaactgtcggaatatacccagagatgaaagatccagtttttatcaa 1503 Query: 765 caagcacgtaaagtgggcagatggaaagaagtttgaggacaaatttgtggataccttact 824 |||||| || ||||||| | ||| ||||||||||||||||||||||||||||||||||| Sbjct: 1504 caagcatgtcaagtgggatggtgggaagaagtttgaggacaaatttgtggataccttact 1563 Query: 825 aaagtacggatacaggggtcaatatatgtccgaaaattggctaaaacagccattgtttat 884 ||||| ||||| | || ||||||||||| ||||||||||| || ||||| |||||||| Sbjct: 1564 gaagtatggatataaaggccaatatatgtcagaaaattggctgaagcagccgttgtttat 1623 Query: 885 acaatcatttgctccctcttcccttgtacatgtatcaaagttgacagactctccgaagat 944 |||||| |||||||| ||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 1624 acaatcttttgctcctacttcccttgtacatgcatcaaagttgacagactctcccaagat 1683 Query: 945 ctttctgattgatgatatcacagtgagaacacaagacacaaaccagtcatactcggaaat 1004 || |||||||| ||| || |||||||||||||||| |||||||||||||||| ||| || Sbjct: 1684 attcctgattgacgatttctcagtgagaacacaagatacaaaccagtcatactgggacat 1743 Query: 1005 cacttcagatgactaccttgcatatattagtaactatgttgtcggcctcggcccgtggaa 1064 |||||| ||||||||||| ||||||||||||||||||||||| ||||| || || ||||| Sbjct: 1744 cacttctgatgactacctagcatatattagtaactatgttgttggccttggtccatggaa 1803 Query: 1065 agatactattgttccagttgcaaaaaactatatgctggaaccaactgatcttgttgcaag 1124 |||||| ||||||||| || |||||||||| | ||| ||| ||||||||||||||||| Sbjct: 1804 agatacggttgttccagcagccaaaaactatacgatggcaccgactgatcttgttgcaag 1863 Query: 1125 agcgcatgctcataatctgcaggtacacccttacacatacaggaacgagaaccagtttct 1184 ||| |||||||||||||| ||||||||||| |||||||||||||||||||| || || || Sbjct: 1864 agcacatgctcataatcttcaggtacacccgtacacatacaggaacgagaatcaattcct 1923 Query: 1185 gcacttcaacttccatcaggatccctatgccgagtacgatttctggataaatacggtggg 1244 |||| |||||||||||||||| || ||||| ||||| |||||||||||||| | |||| Sbjct: 1924 gcacctcaacttccatcaggacccttatgctgagtatgatttctggataaacagcatggg 1983 Query: 1245 ggttgacggattattcacagatttcgctggaagcgtacaccagtaccaagaactgaaaac 1304 ||| || ||||| ||||| |||||| ||||| | | |||| ||||| |||||| | | Sbjct: 1984 ggtcgatggattgttcactgatttcactggatccctgcaccgttaccaggaactggtagc 2043 Query: 1305 cccacacccgaaggacgcaaccgcgagcagcctcctactaaaaattgctcagatgatc 1362 ||||| ||||||| | ||| || | |||||||||| ||||||||||||| |||||| Sbjct: 2044 tccacatgcgaaggatgaaactgcaaacagcctcctagtaaaaattgctcaaatgatc 2101 Score = 295 bits (149), Expect = 3e-76 Identities = 302/353 (85%) Strand = Plus / Plus Query: 234 ttttcttcttctgctactattacatgtggccattgctagaccattctttccactgccaag 293 |||||||||| ||||||| |||||||| || |||||||| |||||||||| ||||| Sbjct: 209 ttttcttcttttgctacttccacatgtggttttttctagaccactctttccactaccaag 268 Query: 294 taagactagtaatgaagagaagaagccaatacagacatttcgaccgtataatattgctca 353 |||| || | |||||||| || |||| || |||||||| ||||| |||||||| Sbjct: 269 caagagtaatggaatagagaagagacccttacaaacttttcgaccatataacattgctca 328 Query: 354 ccgtggctcaaatggggaaatcccggaggaaacaagtgctgcttacctgagggctattga 413 ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||| Sbjct: 329 ccgtggctcaaatggggaaattcctgaggaaacagctgctgcttacctgagggctattga 388 Query: 414 agaaggtgcagattttatagagactgacatccttgctagcaaagatggtgcattgatctg 473 ||||||||| ||||||||||| || ||||||||||||||||||||||| || |||||||| Sbjct: 389 agaaggtgcggattttatagaaacggacatccttgctagcaaagatggggccttgatctg 448 Query: 474 ctttcatgatgtgacacttgatgatacaactgatatttccgtccataaggagttcgccaa 533 |||||||||||| ||||| |||| ||||||||| || || || |||||||| |||| Sbjct: 449 ctttcatgatgtaacactggatgctacaactgacgttgccagccgcaaggagttttccaa 508 Query: 534 tcgaaggagaacctacgaggtggaatgggccaacgttactggctggtttgtag 586 | |||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 509 tagaagaagaacctacgaggtggaatggttcaacgttactggctggtttgtag 561
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 232 bits (117), Expect = 3e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 790 aagaagtttgaggacaaatttgtggataccttactaaagtacggatacaggggtcaatat 849 ||||||||||||||||||||||||||||||||||| ||||| ||||| | || |||||| Sbjct: 32128765 aagaagtttgaggacaaatttgtggataccttactgaagtatggatataaaggccaatat 32128824 Query: 850 atgtccgaaaattggctaaaacagccattgtttatacaatcatttgctccctcttccctt 909 ||||| ||||||||||| || ||||| |||||||||||||| |||||||| |||||||| Sbjct: 32128825 atgtcagaaaattggctgaagcagccgttgtttatacaatcttttgctcctacttccctt 32128884 Query: 910 gtacatgtatcaaagttgacagactctccgaagatctttctgattgatgatatcacagtg 969 ||||||| ||||||||||||||||||||| ||||| || |||||||| ||| || ||||| Sbjct: 32128885 gtacatgcatcaaagttgacagactctcccaagatattcctgattgacgatttctcagtg 32128944 Query: 970 agaacacaagacacaaaccag 990 ||||||||||| ||||||||| Sbjct: 32128945 agaacacaagatacaaaccag 32128965 Score = 192 bits (97), Expect = 3e-45 Identities = 163/185 (88%) Strand = Plus / Plus Query: 402 gagggctattgaagaaggtgcagattttatagagactgacatccttgctagcaaagatgg 461 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 32126759 gagggctattgaagaaggtgcggattttatagaaacggacatccttgctagcaaagatgg 32126818 Query: 462 tgcattgatctgctttcatgatgtgacacttgatgatacaactgatatttccgtccataa 521 || |||||||||||||||||||| ||||| |||| ||||||||| || || || || Sbjct: 32126819 ggccttgatctgctttcatgatgtaacactggatgctacaactgacgttgccagccgcaa 32126878 Query: 522 ggagttcgccaatcgaaggagaacctacgaggtggaatgggccaacgttactggctggtt 581 |||||| ||||| |||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 32126879 ggagttttccaatagaagaagaacctacgaggtggaatggttcaacgctactggctggtt 32126938 Query: 582 tgtag 586 ||||| Sbjct: 32126939 tgtag 32126943 Score = 170 bits (86), Expect = 1e-38 Identities = 143/162 (88%) Strand = Plus / Plus Query: 988 cagtcatactcggaaatcacttcagatgactaccttgcatatattagtaactatgttgtc 1047 |||||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 32129121 cagtcatactgggacatcacttctgatgactacctagcatatattagtaactatgttgtt 32129180 Query: 1048 ggcctcggcccgtggaaagatactattgttccagttgcaaaaaactatatgctggaacca 1107 ||||| || || ||||||||||| ||||||||| || |||||||||| | ||| ||| Sbjct: 32129181 ggccttggtccatggaaagatacggttgttccagcagccaaaaactatacgatggcaccg 32129240 Query: 1108 actgatcttgttgcaagagcgcatgctcataatctgcaggta 1149 |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 32129241 actgatcttgttgcaagagcacatgctcataatcttcaggta 32129282 Score = 157 bits (79), Expect = 2e-34 Identities = 106/115 (92%) Strand = Plus / Plus Query: 661 ggcaaattttcaatcatcacatttgaagaattcatttcaattgccttagatgcaagcaga 720 ||||| |||||||| ||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 32128078 ggcaagttttcaattatcacatttgaagaattcatttctattgccttggatgcaagcaga 32128137 Query: 721 accgttggaatatatccagagataaaagatccagtttttatcaacaagcacgtaa 775 || || |||||||| |||||||| |||||||||||||||||||||||||| |||| Sbjct: 32128138 actgtcggaatatacccagagatgaaagatccagtttttatcaacaagcatgtaa 32128192 Score = 145 bits (73), Expect = 6e-31 Identities = 184/221 (83%) Strand = Plus / Plus Query: 1142 tgcaggtacacccttacacatacaggaacgagaaccagtttctgcacttcaacttccatc 1201 ||||||||||||| ||||||||||||||||||||||| || |||||| |||||||||||| Sbjct: 32129754 tgcaggtacacccgtacacatacaggaacgagaaccaattcctgcacctcaacttccatc 32129813 Query: 1202 aggatccctatgccgagtacgatttctggataaatacggtgggggttgacggattattca 1261 |||| || ||||| ||||| |||||||||||||| | ||||||| || ||||| |||| Sbjct: 32129814 aggacccttatgctgagtatgatttctggataaacagcatgggggtcgatggattgttca 32129873 Query: 1262 cagatttcgctggaagcgtacaccagtaccaagaactgaaaaccccacacccgaaggacg 1321 | |||||| ||||| | | |||| ||||| |||||| | | ||||| ||||||| | Sbjct: 32129874 ctgatttcactggatccctgcaccgttaccaggaactggtagctccacatgcgaaggatg 32129933 Query: 1322 caaccgcgagcagcctcctactaaaaattgctcagatgatc 1362 ||| || | |||||||||| ||||||||||||| |||||| Sbjct: 32129934 aaactgcaaacagcctcctagtaaaaattgctcaaatgatc 32129974 Score = 99.6 bits (50), Expect = 3e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 585 agtggatttcacgcttgaggaacttaaaacacttaaagtgaagcagcgatacccattcag 644 |||||| ||||| |||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct: 32127712 agtggacttcacacttgaggaacttaaaacactgaaagtcaatcagcgatacccattcag 32127771 Query: 645 agatcaacaatataatgg 662 ||| |||||||| ||||| Sbjct: 32127772 agaccaacaatacaatgg 32127789 Score = 97.6 bits (49), Expect = 1e-16 Identities = 139/169 (82%) Strand = Plus / Plus Query: 234 ttttcttcttctgctactattacatgtggccattgctagaccattctttccactgccaag 293 |||||||||| ||||||| |||||||| || |||||||| |||||||||| ||||| Sbjct: 32126040 ttttcttcttttgctacttccacatgtggttttttctagaccactctttccactaccaag 32126099 Query: 294 taagactagtaatgaagagaagaagccaatacagacatttcgaccgtataatattgctca 353 |||| || | |||||||| || |||| || |||||||| ||||| |||||||| Sbjct: 32126100 caagagtaatggaatagagaagagacccttacaaacttttcgaccatataacattgctca 32126159 Query: 354 ccgtggctcaaatggggaaatcccggaggaaacaagtgctgcttacctg 402 ||||||||||||||||||||| || ||||||||| ||||||||||||| Sbjct: 32126160 ccgtggctcaaatggggaaattcctgaggaaacagctgctgcttacctg 32126208 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 ggccgtgccgtcgtcgtcctcctcg 123 ||||| ||||||||||||||||||| Sbjct: 2005448 ggccgcgccgtcgtcgtcctcctcg 2005424 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 gtgccgtcgtcgtcctcctcg 123 ||||||||||||||||||||| Sbjct: 35335316 gtgccgtcgtcgtcctcctcg 35335336
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 232 bits (117), Expect = 3e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 790 aagaagtttgaggacaaatttgtggataccttactaaagtacggatacaggggtcaatat 849 ||||||||||||||||||||||||||||||||||| ||||| ||||| | || |||||| Sbjct: 170579 aagaagtttgaggacaaatttgtggataccttactgaagtatggatataaaggccaatat 170638 Query: 850 atgtccgaaaattggctaaaacagccattgtttatacaatcatttgctccctcttccctt 909 ||||| ||||||||||| || ||||| |||||||||||||| |||||||| |||||||| Sbjct: 170639 atgtcagaaaattggctgaagcagccgttgtttatacaatcttttgctcctacttccctt 170698 Query: 910 gtacatgtatcaaagttgacagactctccgaagatctttctgattgatgatatcacagtg 969 ||||||| ||||||||||||||||||||| ||||| || |||||||| ||| || ||||| Sbjct: 170699 gtacatgcatcaaagttgacagactctcccaagatattcctgattgacgatttctcagtg 170758 Query: 970 agaacacaagacacaaaccag 990 ||||||||||| ||||||||| Sbjct: 170759 agaacacaagatacaaaccag 170779 Score = 192 bits (97), Expect = 3e-45 Identities = 163/185 (88%) Strand = Plus / Plus Query: 402 gagggctattgaagaaggtgcagattttatagagactgacatccttgctagcaaagatgg 461 ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 168573 gagggctattgaagaaggtgcggattttatagaaacggacatccttgctagcaaagatgg 168632 Query: 462 tgcattgatctgctttcatgatgtgacacttgatgatacaactgatatttccgtccataa 521 || |||||||||||||||||||| ||||| |||| ||||||||| || || || || Sbjct: 168633 ggccttgatctgctttcatgatgtaacactggatgctacaactgacgttgccagccgcaa 168692 Query: 522 ggagttcgccaatcgaaggagaacctacgaggtggaatgggccaacgttactggctggtt 581 |||||| ||||| |||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 168693 ggagttttccaatagaagaagaacctacgaggtggaatggttcaacgctactggctggtt 168752 Query: 582 tgtag 586 ||||| Sbjct: 168753 tgtag 168757 Score = 170 bits (86), Expect = 1e-38 Identities = 143/162 (88%) Strand = Plus / Plus Query: 988 cagtcatactcggaaatcacttcagatgactaccttgcatatattagtaactatgttgtc 1047 |||||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 170935 cagtcatactgggacatcacttctgatgactacctagcatatattagtaactatgttgtt 170994 Query: 1048 ggcctcggcccgtggaaagatactattgttccagttgcaaaaaactatatgctggaacca 1107 ||||| || || ||||||||||| ||||||||| || |||||||||| | ||| ||| Sbjct: 170995 ggccttggtccatggaaagatacggttgttccagcagccaaaaactatacgatggcaccg 171054 Query: 1108 actgatcttgttgcaagagcgcatgctcataatctgcaggta 1149 |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 171055 actgatcttgttgcaagagcacatgctcataatcttcaggta 171096 Score = 157 bits (79), Expect = 2e-34 Identities = 106/115 (92%) Strand = Plus / Plus Query: 661 ggcaaattttcaatcatcacatttgaagaattcatttcaattgccttagatgcaagcaga 720 ||||| |||||||| ||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 169892 ggcaagttttcaattatcacatttgaagaattcatttctattgccttggatgcaagcaga 169951 Query: 721 accgttggaatatatccagagataaaagatccagtttttatcaacaagcacgtaa 775 || || |||||||| |||||||| |||||||||||||||||||||||||| |||| Sbjct: 169952 actgtcggaatatacccagagatgaaagatccagtttttatcaacaagcatgtaa 170006 Score = 145 bits (73), Expect = 6e-31 Identities = 184/221 (83%) Strand = Plus / Plus Query: 1142 tgcaggtacacccttacacatacaggaacgagaaccagtttctgcacttcaacttccatc 1201 ||||||||||||| ||||||||||||||||||||||| || |||||| |||||||||||| Sbjct: 171568 tgcaggtacacccgtacacatacaggaacgagaaccaattcctgcacctcaacttccatc 171627 Query: 1202 aggatccctatgccgagtacgatttctggataaatacggtgggggttgacggattattca 1261 |||| || ||||| ||||| |||||||||||||| | ||||||| || ||||| |||| Sbjct: 171628 aggacccttatgctgagtatgatttctggataaacagcatgggggtcgatggattgttca 171687 Query: 1262 cagatttcgctggaagcgtacaccagtaccaagaactgaaaaccccacacccgaaggacg 1321 | |||||| ||||| | | |||| ||||| |||||| | | ||||| ||||||| | Sbjct: 171688 ctgatttcactggatccctgcaccgttaccaggaactggtagctccacatgcgaaggatg 171747 Query: 1322 caaccgcgagcagcctcctactaaaaattgctcagatgatc 1362 ||| || | |||||||||| ||||||||||||| |||||| Sbjct: 171748 aaactgcaaacagcctcctagtaaaaattgctcaaatgatc 171788 Score = 99.6 bits (50), Expect = 3e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 585 agtggatttcacgcttgaggaacttaaaacacttaaagtgaagcagcgatacccattcag 644 |||||| ||||| |||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct: 169526 agtggacttcacacttgaggaacttaaaacactgaaagtcaatcagcgatacccattcag 169585 Query: 645 agatcaacaatataatgg 662 ||| |||||||| ||||| Sbjct: 169586 agaccaacaatacaatgg 169603 Score = 97.6 bits (49), Expect = 1e-16 Identities = 139/169 (82%) Strand = Plus / Plus Query: 234 ttttcttcttctgctactattacatgtggccattgctagaccattctttccactgccaag 293 |||||||||| ||||||| |||||||| || |||||||| |||||||||| ||||| Sbjct: 167854 ttttcttcttttgctacttccacatgtggttttttctagaccactctttccactaccaag 167913 Query: 294 taagactagtaatgaagagaagaagccaatacagacatttcgaccgtataatattgctca 353 |||| || | |||||||| || |||| || |||||||| ||||| |||||||| Sbjct: 167914 caagagtaatggaatagagaagagacccttacaaacttttcgaccatataacattgctca 167973 Query: 354 ccgtggctcaaatggggaaatcccggaggaaacaagtgctgcttacctg 402 ||||||||||||||||||||| || ||||||||| ||||||||||||| Sbjct: 167974 ccgtggctcaaatggggaaattcctgaggaaacagctgctgcttacctg 168022
>gb|DQ023304.1| Aegilops tauschii beta1 proteasome-7D gene, complete cds Length = 6037 Score = 186 bits (94), Expect = 2e-43 Identities = 168/189 (88%), Gaps = 4/189 (2%) Strand = Plus / Minus Query: 1229 ggataaatacggtgggggttgacggattattcacagatttcgctggaagcgtacaccagt 1288 |||||||| |||||||||||||| |||||||||| ||||| |||||||||||| |||||| Sbjct: 5467 ggataaatgcggtgggggttgacagattattcacggatttggctggaagcgtagaccagt 5408 Query: 1289 accaagaactgaaaaccccacacccgaaggacgcaaccgcgagcagcctcctactaaaa- 1347 ||||||||||||| | |||| || |||||| ||||||||||||||||||||||||||| Sbjct: 5407 -ccaagaactgaaatctccacgcctgaaggatgcaaccgcgagcagcctcctactaaaaa 5349 Query: 1348 -attgctcagatgatcgcagcatacgaaggccgctgaataagtttgtgttccagcaaagt 1406 ||||||| |||||| |||||||| ||||| ||||||||||| |||||||||| |||| | Sbjct: 5348 tattgctcggatgatggcagcatatgaaggtcgctgaataag-ttgtgttccatcaaaat 5290 Query: 1407 cactgccat 1415 |||||||| Sbjct: 5289 aactgccat 5281 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1140 tctgcaggtacacccttacacatac 1164 |||||||| |||||||||||||||| Sbjct: 5842 tctgcaggcacacccttacacatac 5818
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0403C05 Length = 151085 Score = 145 bits (73), Expect = 6e-31 Identities = 184/221 (83%) Strand = Plus / Plus Query: 1142 tgcaggtacacccttacacatacaggaacgagaaccagtttctgcacttcaacttccatc 1201 ||||||||||||| ||||||||||||||||||||||| || |||||| |||||||||||| Sbjct: 507 tgcaggtacacccgtacacatacaggaacgagaaccaattcctgcacctcaacttccatc 566 Query: 1202 aggatccctatgccgagtacgatttctggataaatacggtgggggttgacggattattca 1261 |||| || ||||| ||||| |||||||||||||| | ||||||| || ||||| |||| Sbjct: 567 aggacccttatgctgagtatgatttctggataaacagcatgggggtcgatggattgttca 626 Query: 1262 cagatttcgctggaagcgtacaccagtaccaagaactgaaaaccccacacccgaaggacg 1321 | |||||| ||||| | | |||| ||||| |||||| | | ||||| ||||||| | Sbjct: 627 ctgatttcactggatccctgcaccgttaccaggaactggtagctccacatgcgaaggatg 686 Query: 1322 caaccgcgagcagcctcctactaaaaattgctcagatgatc 1362 ||| || | |||||||||| ||||||||||||| |||||| Sbjct: 687 aaactgcaaacagcctcctagtaaaaattgctcaaatgatc 727 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1115 ttgttgcaagagcgcatgctcataatctgcaggta 1149 ||||||||||||| |||||||||||||| |||||| Sbjct: 1 ttgttgcaagagcacatgctcataatcttcaggta 35
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 99.6 bits (50), Expect = 3e-17 Identities = 83/94 (88%) Strand = Plus / Minus Query: 1139 atctgcaggtacacccttacacatacaggaacgagaaccagtttctgcacttcaacttcc 1198 |||||||||| ||||| ||||| ||| |||||||||||||||| |||||||||||||||| Sbjct: 24574860 atctgcaggtgcacccctacacgtaccggaacgagaaccagttcctgcacttcaacttcc 24574801 Query: 1199 atcaggatccctatgccgagtacgatttctggat 1232 |||||||| || ||||||||||| | |||||| Sbjct: 24574800 ggcaggatccgtacgccgagtacgactactggat 24574767
>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0039M16 Length = 133229 Score = 99.6 bits (50), Expect = 3e-17 Identities = 83/94 (88%) Strand = Plus / Minus Query: 1139 atctgcaggtacacccttacacatacaggaacgagaaccagtttctgcacttcaacttcc 1198 |||||||||| ||||| ||||| ||| |||||||||||||||| |||||||||||||||| Sbjct: 30927 atctgcaggtgcacccctacacgtaccggaacgagaaccagttcctgcacttcaacttcc 30868 Query: 1199 atcaggatccctatgccgagtacgatttctggat 1232 |||||||| || ||||||||||| | |||||| Sbjct: 30867 ggcaggatccgtacgccgagtacgactactggat 30834
>dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018H10 Length = 135879 Score = 99.6 bits (50), Expect = 3e-17 Identities = 83/94 (88%) Strand = Plus / Minus Query: 1139 atctgcaggtacacccttacacatacaggaacgagaaccagtttctgcacttcaacttcc 1198 |||||||||| ||||| ||||| ||| |||||||||||||||| |||||||||||||||| Sbjct: 68154 atctgcaggtgcacccctacacgtaccggaacgagaaccagttcctgcacttcaacttcc 68095 Query: 1199 atcaggatccctatgccgagtacgatttctggat 1232 |||||||| || ||||||||||| | |||||| Sbjct: 68094 ggcaggatccgtacgccgagtacgactactggat 68061
>ref|NM_001066743.1| Oryza sativa (japonica cultivar-group) Os07g0602800 (Os07g0602800) mRNA, complete cds Length = 1146 Score = 93.7 bits (47), Expect = 2e-15 Identities = 80/91 (87%) Strand = Plus / Plus Query: 1142 tgcaggtacacccttacacatacaggaacgagaaccagtttctgcacttcaacttccatc 1201 ||||||| ||||| ||||| ||| |||||||||||||||| |||||||||||||||| | Sbjct: 971 tgcaggtgcacccctacacgtaccggaacgagaaccagttcctgcacttcaacttccggc 1030 Query: 1202 aggatccctatgccgagtacgatttctggat 1232 ||||||| || ||||||||||| | |||||| Sbjct: 1031 aggatccgtacgccgagtacgactactggat 1061
>ref|NM_001057163.1| Oryza sativa (japonica cultivar-group) Os03g0603600 (Os03g0603600) mRNA, complete cds Length = 1473 Score = 77.8 bits (39), Expect = 1e-10 Identities = 54/59 (91%) Strand = Plus / Plus Query: 391 gctgcttacctgagggctattgaagaaggtgcagattttatagagactgacatccttgc 449 ||||| ||||||||||||||||||||||||||||| || |||||| ||||||| ||||| Sbjct: 278 gctgcctacctgagggctattgaagaaggtgcagacttcatagagtctgacatacttgc 336 Score = 52.0 bits (26), Expect = 0.007 Identities = 50/58 (86%) Strand = Plus / Plus Query: 755 tttttatcaacaagcacgtaaagtgggcagatggaaagaagtttgaggacaaatttgt 812 |||| |||||| ||||||| || ||| |||| || ||||||||||||||||| ||||| Sbjct: 642 ttttcatcaacgagcacgtcaaatggtcagacgggaagaagtttgaggacaagtttgt 699
>gb|AY818398.1| Manihot esculenta glycerophosphodiester phosphodiesterase-like protein mRNA, partial cds Length = 849 Score = 77.8 bits (39), Expect = 1e-10 Identities = 153/191 (80%) Strand = Plus / Plus Query: 622 gtgaagcagcgatacccattcagagatcaacaatataatggcaaattttcaatcatcaca 681 ||||||||| || | |||||| |||||||||| |||||||| |||||||| || ||||| Sbjct: 418 gtgaagcagagacatccattccgagatcaacagtataatggaaaattttctattatcacc 477 Query: 682 tttgaagaattcatttcaattgccttagatgcaagcagaaccgttggaatatatccagag 741 |||||||| ||||| ||||||| | |||||| ||| || |||||||| || ||| Sbjct: 478 tttgaagagttcatagcaattgcactggatgcatcaagagttgtcggaatataccctgag 537 Query: 742 ataaaagatccagtttttatcaacaagcacgtaaagtgggcagatggaaagaagtttgag 801 || ||| | ||||||||||| ||| |||| || |||||| ||| ||| ||| |||||| Sbjct: 538 atgaaaaacccagtttttattaaccagcatgttaagtggccaggtgggaagcgatttgag 597 Query: 802 gacaaatttgt 812 ||||| ||||| Sbjct: 598 gacaagtttgt 608 Score = 48.1 bits (24), Expect = 0.10 Identities = 90/112 (80%) Strand = Plus / Plus Query: 323 tacagacatttcgaccgtataatattgctcaccgtggctcaaatggggaaatcccggagg 382 ||||||| | ||| || ||||||||||| || || || |||||||| || || || || | Sbjct: 119 tacagacttctcgtccatataatattgcacatcgaggatcaaatggtgagattccagaag 178 Query: 383 aaacaagtgctgcttacctgagggctattgaagaaggtgcagattttataga 434 |||| |||||| ||| |||| || ||||||||||| ||||| |||||||| Sbjct: 179 aaactgctgctgcatacatgagagccattgaagaaggagcagactttataga 230
>dbj|AK071836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023117P17, full insert sequence Length = 1475 Score = 77.8 bits (39), Expect = 1e-10 Identities = 54/59 (91%) Strand = Plus / Plus Query: 391 gctgcttacctgagggctattgaagaaggtgcagattttatagagactgacatccttgc 449 ||||| ||||||||||||||||||||||||||||| || |||||| ||||||| ||||| Sbjct: 280 gctgcctacctgagggctattgaagaaggtgcagacttcatagagtctgacatacttgc 338 Score = 52.0 bits (26), Expect = 0.007 Identities = 50/58 (86%) Strand = Plus / Plus Query: 755 tttttatcaacaagcacgtaaagtgggcagatggaaagaagtttgaggacaaatttgt 812 |||| |||||| ||||||| || ||| |||| || ||||||||||||||||| ||||| Sbjct: 644 ttttcatcaacgagcacgtcaaatggtcagacgggaagaagtttgaggacaagtttgt 701
>gb|DQ244505.1| Zea mays clone 8639 mRNA sequence Length = 1471 Score = 71.9 bits (36), Expect = 7e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 1141 ctgcaggtacacccttacacatacaggaacgagaaccagtttctgcacttcaacttccat 1200 |||||||| ||||| ||||| ||| | ||||||||| |||| ||||||||| |||||| Sbjct: 1062 ctgcaggtgcacccctacacgtaccgcaacgagaacaagttcctgcacttcgacttccgg 1121 Query: 1201 caggatccctatgccgagtacgatttctggat 1232 ||||| ||||| ||||||||||| | |||||| Sbjct: 1122 caggacccctacgccgagtacgactactggat 1153
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 63.9 bits (32), Expect = 2e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 402 gagggctattgaagaaggtgcagattttatagagactgacatccttgc 449 |||||||||||||||||||||||| || |||||| ||||||| ||||| Sbjct: 20182 gagggctattgaagaaggtgcagacttcatagagtctgacatacttgc 20229 Score = 44.1 bits (22), Expect = 1.6 Identities = 40/46 (86%) Strand = Plus / Plus Query: 845 aatatatgtccgaaaattggctaaaacagccattgtttatacaatc 890 |||| ||||| ||| ||||||| |||||||||||||| || ||||| Sbjct: 21702 aatacatgtctgaagattggcttaaacagccattgttcattcaatc 21747
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 63.9 bits (32), Expect = 2e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 402 gagggctattgaagaaggtgcagattttatagagactgacatccttgc 449 |||||||||||||||||||||||| || |||||| ||||||| ||||| Sbjct: 22417964 gagggctattgaagaaggtgcagacttcatagagtctgacatacttgc 22418011 Score = 44.1 bits (22), Expect = 1.6 Identities = 40/46 (86%) Strand = Plus / Plus Query: 845 aatatatgtccgaaaattggctaaaacagccattgtttatacaatc 890 |||| ||||| ||| ||||||| |||||||||||||| || ||||| Sbjct: 22419484 aatacatgtctgaagattggcttaaacagccattgttcattcaatc 22419529
>ref|NM_106081.2| Arabidopsis thaliana glycerophosphodiester phosphodiesterase (AT1G74210) mRNA, complete cds Length = 1413 Score = 56.0 bits (28), Expect = 4e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 724 gttggaatatatccagagataaaagatccagtttttatcaacaagcacgtaaagtgggca 783 |||||||||||||| ||||| ||| |||||||||| || ||| |||| || || ||| | Sbjct: 595 gttggaatatatcctgagattaaaaatccagttttaatgaaccagcatgtcaaatggcct 654 Query: 784 gatggaaagaagtttgaggacaaatttgtgga 815 | ||| ||||| |||||||| ||| ||||||| Sbjct: 655 ggtggtaagaaatttgaggataaagttgtgga 686
>gb|AY142654.1| Arabidopsis thaliana putative glycerophosphodiester phosphodiesterase (At1g74210) mRNA, complete cds Length = 1210 Score = 56.0 bits (28), Expect = 4e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 724 gttggaatatatccagagataaaagatccagtttttatcaacaagcacgtaaagtgggca 783 |||||||||||||| ||||| ||| |||||||||| || ||| |||| || || ||| | Sbjct: 517 gttggaatatatcctgagattaaaaatccagttttaatgaaccagcatgtcaaatggcct 576 Query: 784 gatggaaagaagtttgaggacaaatttgtgga 815 | ||| ||||| |||||||| ||| ||||||| Sbjct: 577 ggtggtaagaaatttgaggataaagttgtgga 608
>gb|AY064037.1| Arabidopsis thaliana putative glycerophosphodiester phosphodiesterase (At1g74210) mRNA, complete cds Length = 1370 Score = 56.0 bits (28), Expect = 4e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 724 gttggaatatatccagagataaaagatccagtttttatcaacaagcacgtaaagtgggca 783 |||||||||||||| ||||| ||| |||||||||| || ||| |||| || || ||| | Sbjct: 597 gttggaatatatcctgagattaaaaatccagttttaatgaaccagcatgtcaaatggcct 656 Query: 784 gatggaaagaagtttgaggacaaatttgtgga 815 | ||| ||||| |||||||| ||| ||||||| Sbjct: 657 ggtggtaagaaatttgaggataaagttgtgga 688
>gb|AY086343.1| Arabidopsis thaliana clone 24182 mRNA, complete sequence Length = 1317 Score = 56.0 bits (28), Expect = 4e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 724 gttggaatatatccagagataaaagatccagtttttatcaacaagcacgtaaagtgggca 783 |||||||||||||| ||||| ||| |||||||||| || ||| |||| || || ||| | Sbjct: 560 gttggaatatatcctgagattaaaaatccagttttaatgaaccagcatgtcaaatggcct 619 Query: 784 gatggaaagaagtttgaggacaaatttgtgga 815 | ||| ||||| |||||||| ||| ||||||| Sbjct: 620 ggtggtaagaaatttgaggataaagttgtgga 651
>emb|BX814399.1|CNS0AC8O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB71ZE09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1328 Score = 56.0 bits (28), Expect = 4e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 724 gttggaatatatccagagataaaagatccagtttttatcaacaagcacgtaaagtgggca 783 |||||||||||||| ||||| ||| |||||||||| || ||| |||| || || ||| | Sbjct: 593 gttggaatatatcctgagattaaaaatccagttttaatgaaccagcatgtcaaatggcct 652 Query: 784 gatggaaagaagtttgaggacaaatttgtgga 815 | ||| ||||| |||||||| ||| ||||||| Sbjct: 653 ggtggtaagaaatttgaggataaagttgtgga 684
>emb|BX814428.1|CNS0AC2Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZC12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1313 Score = 56.0 bits (28), Expect = 4e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 724 gttggaatatatccagagataaaagatccagtttttatcaacaagcacgtaaagtgggca 783 |||||||||||||| ||||| ||| |||||||||| || ||| |||| || || ||| | Sbjct: 594 gttggaatatatcctgagattaaaaatccagttttaatgaaccagcatgtcaaatggcct 653 Query: 784 gatggaaagaagtttgaggacaaatttgtgga 815 | ||| ||||| |||||||| ||| ||||||| Sbjct: 654 ggtggtaagaaatttgaggataaagttgtgga 685
>emb|BX816255.1|CNS0ABSN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZG07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1234 Score = 56.0 bits (28), Expect = 4e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 724 gttggaatatatccagagataaaagatccagtttttatcaacaagcacgtaaagtgggca 783 |||||||||||||| ||||| ||| |||||||||| || ||| |||| || || ||| | Sbjct: 512 gttggaatatatcctgagattaaaaatccagttttaatgaaccagcatgtcaaatggcct 571 Query: 784 gatggaaagaagtttgaggacaaatttgtgga 815 | ||| ||||| |||||||| ||| ||||||| Sbjct: 572 ggtggtaagaaatttgaggataaagttgtgga 603
>ref|NM_001054798.1| Oryza sativa (japonica cultivar-group) Os02g0772100 (Os02g0772100) mRNA, partial cds Length = 1405 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Minus Query: 100 gccgtgccgtcgtcgtcctcctcg 123 |||||||||||||||||||||||| Sbjct: 176 gccgtgccgtcgtcgtcctcctcg 153
>ref|NM_120885.2| Arabidopsis thaliana glycerophosphodiester phosphodiesterase (AT5G08030) mRNA, complete cds Length = 1238 Score = 48.1 bits (24), Expect = 0.10 Identities = 75/92 (81%) Strand = Plus / Plus Query: 724 gttggaatatatccagagataaaagatccagtttttatcaacaagcacgtaaagtgggca 783 ||||| |||||||||||||| || |||| ||||| || || |||| || |||||||| Sbjct: 517 gttgggatatatccagagatcaagaatccggttttcatgaatcagcaagtgaagtgggcg 576 Query: 784 gatggaaagaagtttgaggacaaatttgtgga 815 ||||| || || ||||| || ||||||||||| Sbjct: 577 gatggtaaaaaatttgaagataaatttgtgga 608 Score = 48.1 bits (24), Expect = 0.10 Identities = 69/84 (82%) Strand = Plus / Plus Query: 1104 accaactgatcttgttgcaagagcgcatgctcataatctgcaggtacacccttacacata 1163 |||||| ||| | ||||| ||||| ||| | | |||||| ||||| || || |||||||| Sbjct: 897 accaacagatttagttgcgagagcacattcgcgtaatcttcaggtccatccatacacata 956 Query: 1164 caggaacgagaaccagtttctgca 1187 | | || ||||||||||||||||| Sbjct: 957 ccgtaatgagaaccagtttctgca 980
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Minus Query: 100 gccgtgccgtcgtcgtcctcctcg 123 |||||||||||||||||||||||| Sbjct: 32610468 gccgtgccgtcgtcgtcctcctcg 32610445 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 ggccgtgccgtcgtcgtcctcctcg 123 ||||| ||||||||||||||||||| Sbjct: 29737919 ggccgcgccgtcgtcgtcctcctcg 29737943 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 ggccgtgccgtcgtcgtcctcctcg 123 ||||| ||||||||||||||||||| Sbjct: 35604608 ggccgcgccgtcgtcgtcctcctcg 35604584
>gb|BT023450.1| Arabidopsis thaliana At5g08030 gene, complete cds Length = 1225 Score = 48.1 bits (24), Expect = 0.10 Identities = 75/92 (81%) Strand = Plus / Plus Query: 724 gttggaatatatccagagataaaagatccagtttttatcaacaagcacgtaaagtgggca 783 ||||| |||||||||||||| || |||| ||||| || || |||| || |||||||| Sbjct: 528 gttgggatatatccagagatcaagaatccggttttcatgaatcagcaagtgaagtgggcg 587 Query: 784 gatggaaagaagtttgaggacaaatttgtgga 815 ||||| || || ||||| || ||||||||||| Sbjct: 588 gatggtaaaaaatttgaagataaatttgtgga 619 Score = 48.1 bits (24), Expect = 0.10 Identities = 69/84 (82%) Strand = Plus / Plus Query: 1104 accaactgatcttgttgcaagagcgcatgctcataatctgcaggtacacccttacacata 1163 |||||| ||| | ||||| ||||| ||| | | |||||| ||||| || || |||||||| Sbjct: 908 accaacagatttagttgcgagagcacattcgcgtaatcttcaggtccatccatacacata 967 Query: 1164 caggaacgagaaccagtttctgca 1187 | | || ||||||||||||||||| Sbjct: 968 ccgtaatgagaaccagtttctgca 991
>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1611_C08 Length = 135386 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Minus Query: 100 gccgtgccgtcgtcgtcctcctcg 123 |||||||||||||||||||||||| Sbjct: 37839 gccgtgccgtcgtcgtcctcctcg 37816
>emb|BX814846.1|CNS0ABII Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS10ZH05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1281 Score = 48.1 bits (24), Expect = 0.10 Identities = 75/92 (81%) Strand = Plus / Plus Query: 724 gttggaatatatccagagataaaagatccagtttttatcaacaagcacgtaaagtgggca 783 |||||||||||||| ||||| ||| ||||||| || || ||| |||| || || ||| | Sbjct: 549 gttggaatatatcctgagattaaaaatccagtcttaatgaaccagcatgtcaaatggcct 608 Query: 784 gatggaaagaagtttgaggacaaatttgtgga 815 | ||| ||||| |||||||| ||| ||||||| Sbjct: 609 ggtggtaagaaatttgaggataaagttgtgga 640
>emb|BX830013.1|CNS0A1JL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB53ZA12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1225 Score = 48.1 bits (24), Expect = 0.10 Identities = 75/92 (81%) Strand = Plus / Plus Query: 724 gttggaatatatccagagataaaagatccagtttttatcaacaagcacgtaaagtgggca 783 ||||| |||||||||||||| || |||| ||||| || || |||| || |||||||| Sbjct: 529 gttgggatatatccagagatcaagaatccggttttcatgaatcagcaagtgaagtgggcg 588 Query: 784 gatggaaagaagtttgaggacaaatttgtgga 815 ||||| || || ||||| || ||||||||||| Sbjct: 589 gatggtaaaaaatttgaagataaatttgtgga 620
>dbj|AK064111.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G12, full insert sequence Length = 1405 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Minus Query: 100 gccgtgccgtcgtcgtcctcctcg 123 |||||||||||||||||||||||| Sbjct: 176 gccgtgccgtcgtcgtcctcctcg 153
>emb|CR354423.12| Zebrafish DNA sequence from clone CH211-168O15 in linkage group 7, complete sequence Length = 132329 Score = 46.1 bits (23), Expect = 0.41 Identities = 23/23 (100%) Strand = Plus / Minus Query: 602 aggaacttaaaacacttaaagtg 624 ||||||||||||||||||||||| Sbjct: 124605 aggaacttaaaacacttaaagtg 124583
>gb|AC020579.5|AC020579 Arabidopsis thaliana chromosome 1 BAC F1O17 genomic sequence, complete sequence Length = 50821 Score = 46.1 bits (23), Expect = 0.41 Identities = 32/35 (91%) Strand = Plus / Minus Query: 724 gttggaatatatccagagataaaagatccagtttt 758 |||||||||||||| ||||| ||| |||||||||| Sbjct: 41189 gttggaatatatcctgagattaaaaatccagtttt 41155
>emb|BX248306.5| Zebrafish DNA sequence from clone CH211-230K7 in linkage group 7, complete sequence Length = 119504 Score = 46.1 bits (23), Expect = 0.41 Identities = 23/23 (100%) Strand = Plus / Plus Query: 602 aggaacttaaaacacttaaagtg 624 ||||||||||||||||||||||| Sbjct: 53614 aggaacttaaaacacttaaagtg 53636
>gb|CP000454.1| Arthrobacter sp. FB24, complete genome Length = 4698945 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 98 cggccgtgccgtcgtcgtcctc 119 |||||||||||||||||||||| Sbjct: 1634989 cggccgtgccgtcgtcgtcctc 1634968
>gb|AY214134.1| Salmo salar SWS2 opsin mRNA, complete cds Length = 1065 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 223 tgtcatgttccttttcttcttctgct 248 |||||||||||| ||||||||||||| Sbjct: 639 tgtcatgttcctcttcttcttctgct 664
>emb|CT030470.1| Xenopus tropicalis finished cDNA, clone TGas066j03 Length = 4683 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 449 ctagcaaagatggtgcattgat 470 |||||||||||||||||||||| Sbjct: 2419 ctagcaaagatggtgcattgat 2398
>gb|AC153362.4| Mus musculus BAC clone RP23-92N20 from chromosome 10, complete sequence Length = 214898 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 782 cagatggaaagaagtttgagga 803 |||||||||||||||||||||| Sbjct: 4804 cagatggaaagaagtttgagga 4825
>gb|AC144783.4| Mus musculus BAC clone RP23-57A16 from 10, complete sequence Length = 246132 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 782 cagatggaaagaagtttgagga 803 |||||||||||||||||||||| Sbjct: 141950 cagatggaaagaagtttgagga 141929
>ref|NM_001071549.1| Oryza sativa (japonica cultivar-group) Os10g0506900 (Os10g0506900) mRNA, complete cds Length = 1994 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 ggccgtgccgtcgtcgtcctcctcg 123 ||||| ||||||||||||||||||| Sbjct: 372 ggccgcgccgtcgtcgtcctcctcg 348
>ref|NM_001064274.1| Oryza sativa (japonica cultivar-group) Os06g0518100 (Os06g0518100) mRNA, partial cds Length = 3236 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 ggccgtgccgtcgtcgtcctcctcg 123 ||||| ||||||||||||||||||| Sbjct: 1777 ggccgcgccgtcgtcgtcctcctcg 1801
>ref|NM_001055135.1| Oryza sativa (japonica cultivar-group) Os02g0828300 (Os02g0828300) mRNA, complete cds Length = 1179 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 ggccgtgccgtcgtcgtcctcctcg 123 ||||| ||||||||||||||||||| Sbjct: 776 ggccgcgccgtcgtcgtcctcctcg 800
>ref|NM_001055134.1| Oryza sativa (japonica cultivar-group) Os02g0828400 (Os02g0828400) mRNA, partial cds Length = 1376 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 ggccgtgccgtcgtcgtcctcctcg 123 ||||| ||||||||||||||||||| Sbjct: 343 ggccgcgccgtcgtcgtcctcctcg 319
>gb|AC189332.1| Brassica rapa subsp. pekinensis clone KBrB038E05, complete sequence Length = 140757 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 402 gagggctattgaagaaggtgcagattttataga 434 |||||| ||||| |||||||||||||| ||||| Sbjct: 29253 gagggcgattgaggaaggtgcagatttcataga 29221
>gb|AC006603.1| Caenorhabditis elegans cosmid B0524, complete sequence Length = 41084 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 664 aaattttcaatcatcacatttgaag 688 |||||||||||||||| |||||||| Sbjct: 16414 aaattttcaatcatcaaatttgaag 16438
>ref|XM_637668.1| Dictyostelium discoideum AX4 puative endonuclease III (apnB) mRNA, complete cds Length = 1050 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 682 tttgaagaattcatttcaatt 702 ||||||||||||||||||||| Sbjct: 1019 tttgaagaattcatttcaatt 999
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 cccggccgtgccgtcgtcgtc 116 ||||||||||||||||||||| Sbjct: 1163802 cccggccgtgccgtcgtcgtc 1163782
>gb|AC146939.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0064M09 map near S6115, complete sequence Length = 215240 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 gtgccgtcgtcgtcctcctcg 123 ||||||||||||||||||||| Sbjct: 28236 gtgccgtcgtcgtcctcctcg 28256
>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05 map S21174S, complete sequence Length = 178867 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 ggccgtgccgtcgtcgtcctcctcg 123 ||||| ||||||||||||||||||| Sbjct: 158776 ggccgcgccgtcgtcgtcctcctcg 158752
>gb|AE013205.1| Thermoanaerobacter tengcongensis MB4, section 232 of 244 of the complete genome Length = 14275 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 gggaggaagaagaggatggca 30 ||||||||||||||||||||| Sbjct: 10544 gggaggaagaagaggatggca 10524
>gb|BT014226.1| Lycopersicon esculentum clone 133421F, mRNA sequence Length = 1722 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 ttccttttcttcttctgctac 250 ||||||||||||||||||||| Sbjct: 140 ttccttttcttcttctgctac 120
>gb|AC116977.2| Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4, complete sequence Length = 302156 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 682 tttgaagaattcatttcaatt 702 ||||||||||||||||||||| Sbjct: 203562 tttgaagaattcatttcaatt 203542
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 gtgccgtcgtcgtcctcctcg 123 ||||||||||||||||||||| Sbjct: 12645560 gtgccgtcgtcgtcctcctcg 12645580
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 ggccgtgccgtcgtcgtcctcctcg 123 ||||| ||||||||||||||||||| Sbjct: 18861040 ggccgcgccgtcgtcgtcctcctcg 18861016
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 ggccgtgccgtcgtcgtcctcctcg 123 ||||| ||||||||||||||||||| Sbjct: 18632748 ggccgcgccgtcgtcgtcctcctcg 18632772
>dbj|AP006148.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT41D09, TM0304, complete sequence Length = 114776 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 750 tccagtttttatcaacaagca 770 ||||||||||||||||||||| Sbjct: 111439 tccagtttttatcaacaagca 111459
>emb|AL161442.22| Human DNA sequence from clone RP6-102F8 on chromosome Xq25-26.3 Contains the 5' end of variants of the MBNL3 gene for muscleblind-like 3 (Drosophila) and a CpG island, complete sequence Length = 112453 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 234 ttttcttcttctgctactattacatgtgg 262 |||||||||| ||||||||||| |||||| Sbjct: 96342 ttttcttcttatgctactattatatgtgg 96370
>emb|AL157406.19| Human DNA sequence from clone RP3-380B4 on chromosome 1p31.3-33 Contains a novel gene, complete sequence Length = 123085 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1024 gcatatattagtaactatgtt 1044 ||||||||||||||||||||| Sbjct: 116714 gcatatattagtaactatgtt 116694
>emb|AL023575.1|HS931E15 Human DNA sequence from clone RP5-931E15 on chromosome Xq25 Contains the 5' end of the THOC2 gene for THO complex 2, a novel gene, a chromosome 2 open reading frame 4 (C2orf4) pseudogene, a coiled-coil-helix-coiled-coil-helix domain containing 2 (CHCHD2) pseudogene and a CpG island, complete sequence Length = 81874 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 228 tgttccttttcttcttctgctacta 252 ||||| ||||||||||||||||||| Sbjct: 17928 tgttctttttcttcttctgctacta 17904
>dbj|AP003315.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E11 Length = 146083 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 gtgccgtcgtcgtcctcctcg 123 ||||||||||||||||||||| Sbjct: 99177 gtgccgtcgtcgtcctcctcg 99197
>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0452F04 Length = 171421 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 ggccgtgccgtcgtcgtcctcctcg 123 ||||| ||||||||||||||||||| Sbjct: 121000 ggccgcgccgtcgtcgtcctcctcg 120976
>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1191_G08 Length = 172832 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 ggccgtgccgtcgtcgtcctcctcg 123 ||||| ||||||||||||||||||| Sbjct: 106898 ggccgcgccgtcgtcgtcctcctcg 106922
>gb|AC019052.7| Homo sapiens BAC clone RP11-96E16 from 2, complete sequence Length = 117955 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 292 agtaagactagtaatgaagagaaga 316 |||||||||||||||||||| |||| Sbjct: 48859 agtaagactagtaatgaagaaaaga 48883
>dbj|AP003250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443D08 Length = 146670 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 ggccgtgccgtcgtcgtcctcctcg 123 ||||| ||||||||||||||||||| Sbjct: 68026 ggccgcgccgtcgtcgtcctcctcg 68002
>dbj|AP005468.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0020P04 Length = 153894 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 ggccgtgccgtcgtcgtcctcctcg 123 ||||| ||||||||||||||||||| Sbjct: 84851 ggccgcgccgtcgtcgtcctcctcg 84875
>dbj|AK119810.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H04, full insert sequence Length = 3239 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 ggccgtgccgtcgtcgtcctcctcg 123 ||||| ||||||||||||||||||| Sbjct: 1779 ggccgcgccgtcgtcgtcctcctcg 1803
>dbj|AK108744.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-E08, full insert sequence Length = 1183 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 ggccgtgccgtcgtcgtcctcctcg 123 ||||| ||||||||||||||||||| Sbjct: 780 ggccgcgccgtcgtcgtcctcctcg 804
>dbj|AK107588.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-A03, full insert sequence Length = 1376 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 ggccgtgccgtcgtcgtcctcctcg 123 ||||| ||||||||||||||||||| Sbjct: 343 ggccgcgccgtcgtcgtcctcctcg 319
>dbj|AK100756.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118O21, full insert sequence Length = 816 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 ggccgtgccgtcgtcgtcctcctcg 123 ||||| ||||||||||||||||||| Sbjct: 295 ggccgcgccgtcgtcgtcctcctcg 271
>dbj|AK064891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000K19, full insert sequence Length = 1997 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 ggccgtgccgtcgtcgtcctcctcg 123 ||||| ||||||||||||||||||| Sbjct: 374 ggccgcgccgtcgtcgtcctcctcg 350
>emb|BX649385.8| Zebrafish DNA sequence from clone CH211-127M24 in linkage group 20, complete sequence Length = 165089 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 664 aaattttcaatcatcacattt 684 ||||||||||||||||||||| Sbjct: 146599 aaattttcaatcatcacattt 146579
>emb|BX324175.6| Zebrafish DNA sequence from clone DKEY-237M7 in linkage group 22, complete sequence Length = 222879 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 664 aaattttcaatcatcacattt 684 ||||||||||||||||||||| Sbjct: 165792 aaattttcaatcatcacattt 165772
>emb|Z82976.1|HS506G2B Human DNA sequence from clone RP3-506G2 on chromosome X, complete sequence Length = 37027 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 228 tgttccttttcttcttctgctacta 252 ||||| ||||||||||||||||||| Sbjct: 17524 tgttctttttcttcttctgctacta 17500
>emb|BX324180.4| Zebrafish DNA sequence from clone CH211-134O13 in linkage group 22, complete sequence Length = 136724 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 664 aaattttcaatcatcacattt 684 ||||||||||||||||||||| Sbjct: 63737 aaattttcaatcatcacattt 63717
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1529 ttatgtatgcctattcattaa 1549 ||||||||||||||||||||| Sbjct: 372668 ttatgtatgcctattcattaa 372648
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29 Length = 303450 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 95 gcccggccgtgccgtcgtcgtcctcctcg 123 ||||| |||||||||||||| |||||||| Sbjct: 270350 gcccgcccgtgccgtcgtcgccctcctcg 270322 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 304,650,427 Number of extensions: 16547652 Number of successful extensions: 332253 Number of sequences better than 10.0: 79 Number of HSP's gapped: 332243 Number of HSP's successfully gapped: 115 Length of query: 1688 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1665 Effective length of database: 18,503,978,556 Effective search space: 30809124295740 Effective search space used: 30809124295740 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)