>Q1W617:SHRM4_MOUSE Protein Shroom4 - Mus musculus (Mouse)|
          Length = 1475
 Score = 35.8 bits (81), Expect = 0.80
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = -3

Query: 841 STGKKCEKLAEGIAGNSSPSEELFMGKSSMIISTVWTHSENVTIMTGSARRRHGLW-NHW 665
           S   +  K   G+ G  SP +    G+SS+ ++T W  S++ T+ T  A   HG+   HW
Sbjct: 662 SQASESSKARGGVEGRMSPGQR--SGQSSLALNTWWKASDSSTLDTEKANAHHGVCRGHW 719

Query: 664 NRS 656
             S
Sbjct: 720 RWS 722

>Q9NQX4:MYO5C_HUMAN Myosin-Vc - Homo sapiens (Human)|
          Length = 1742

 Score = 35.8 bits (81), Expect = 0.80
 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
 Frame = -3

Query: 1441 RTSMSPKMEEALKT*ALERTQFQNVKTNLHAGDLEGENRICDL----RNPKLDSRSSNHR 1274
            +  M  KM E  K   LE    ++V++ L   DLE  N   +L       K  +R     
Sbjct: 1096 KREMREKMSEITKQ-LLESYDIEDVRSRLSVEDLEHLNEDGELWFAYEGLKKATRVLESH 1154

Query: 1273 FQSCSDCVRREPEHVTTKVNHHNERATMLHRMHRK 1169
            FQS  DC  +E E +  KV H ++    L ++ R+
Sbjct: 1155 FQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFRE 1189

>Q09575:YRD6_CAEEL Uncharacterized protein K02A2.6 - Caenorhabditis elegans|
          Length = 1268

 Score = 35.0 bits (79), Expect = 1.4
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 2087 DIFSCSICNARGHLAANCTASPRCSNNMVGHARSRG 2194
            +I +C  CN +GH A NC ++P+  N      +S+G
Sbjct: 237  EIPTCFYCNKKGHYATNCRSNPKTGNQGGNKGKSKG 272

>Q8TB24:RIN3_HUMAN Ras and Rab interactor 3 - Homo sapiens (Human)|
          Length = 984

 Score = 34.7 bits (78), Expect = 1.8
 Identities = 33/117 (28%), Positives = 47/117 (40%), Gaps = 7/117 (5%)
 Frame = +2

Query: 1694 PVPSPERIIISAPPPAELRWTAATPHITFGTVSCQVSSPGSPGEDFQTAKIFGTSHMQQE 1873
            PVP P +  IS    + L        +    ++ +  +PG P E    A   GT H   +
Sbjct: 457  PVPPPRKKRISRQLASTLPAPLENAELCTQAMALETPTPGPPREGQSPASQAGTQHPPAQ 516

Query: 1874 ATT---NPAEIHG---TLNDGNQFSVASLDSGQIS-SLINEPAEVFSSPGPEPNCTM 2023
            AT    +  E  G   +L+D    SV + D    S S   E  E FSSP  +   +M
Sbjct: 517  ATAHSQSSPEFKGSLASLSDSLGVSVMATDQDSYSTSSTEEELEQFSSPSVKKKPSM 573

>Q5KNV7:TIM50_CRYNE Import inner membrane translocase subunit TIM50, mitochondrial|
            precursor - Cryptococcus neoformans (Filobasidiella
            neoformans)
          Length = 516

 Score = 33.5 bits (75), Expect = 4.0
 Identities = 27/96 (28%), Positives = 44/96 (45%)
 Frame = +2

Query: 1694 PVPSPERIIISAPPPAELRWTAATPHITFGTVSCQVSSPGSPGEDFQTAKIFGTSHMQQE 1873
            P P PE +  S P   E+  +  T        + + +S G+P    Q   +FG +H    
Sbjct: 43   PPPVPENVNPSQPFEPEVSKSEGTAKAAETQQAEEPASAGTPLTPPQPEVVFGNTH--SA 100

Query: 1874 ATTNPAEIHGTLNDGNQFSVASLDSGQISSLINEPA 1981
            A+T P E    + + +   + SLD  Q ++ I+EPA
Sbjct: 101  ASTTP-ETEPNVENPDYSKLPSLDIDQEAAAISEPA 135

>Q6MFY8:TRI40_RAT Tripartite motif-containing protein 40 - Rattus norvegicus (Rat)|
          Length = 247

 Score = 33.1 bits (74), Expect = 5.2
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
 Frame = -3

Query: 1336 GENRICDLRNPKLDSRSSNHRFQSCSDCVRREPEH-------VTTKVNHHNERATMLHRM 1178
            G+N IC     ++     + R   C +C+ + PEH       +   ++H+ ER   L+R 
Sbjct: 64   GDNYICHTHQKRVCRFCESSRHLLCEECL-QSPEHRAHTELSIENAISHYKER---LNRR 119

Query: 1177 HRKTRVAINLMRESQAVREIQIQRRTTHAGHAGPR 1073
             RK R  +  ++  +A  E  +Q      G   PR
Sbjct: 120  SRKLRKDLGDLQRLKAQEEKMLQALQVDWGSHRPR 154

>Q8BGD9:IF4B_MOUSE Eukaryotic translation initiation factor 4B - Mus musculus (Mouse)|
          Length = 611

 Score = 32.7 bits (73), Expect = 6.8
 Identities = 24/97 (24%), Positives = 35/97 (36%)
 Frame = +2

Query: 1694 PVPSPERIIISAPPPAELRWTAATPHITFGTVSCQVSSPGSPGEDFQTAKIFGTSHMQQE 1873
            P P     ++ APPP E  W   +            S+P +  +   T +   TS   + 
Sbjct: 465  PKPDQPLKVMPAPPPKENAWVKRS------------SNPPARSQSSDTEQPSPTSGGGKV 512

Query: 1874 ATTNPAEIHGTLNDGNQFSVASLDSGQISSLINEPAE 1984
            A   P E   +  DGN+  V     GQ  S    P +
Sbjct: 513  AAVQPPEEGPSRKDGNKVDVVGATQGQAGSCSRGPGD 549

>Q7TN31:AGGF1_MOUSE Angiogenic factor with G patch and FHA domains 1 - Mus musculus|
            (Mouse)
          Length = 711

 Score = 32.7 bits (73), Expect = 6.8
 Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 4/144 (2%)
 Frame = -3

Query: 1507 GAHNNPLRITLLLPQSKFPTPIRTSMSPKMEEALKT*ALERTQFQNVKTNLHAGDLEGEN 1328
            G     +R  L L +   P  +  ++S + +E  +  AL++ +   VK  L   D E E 
Sbjct: 522  GCEPGQVRAHLRLDRKDEPL-VGPALSKEEKELERRKALKKIR---VKYGLQNTDYEAEK 577

Query: 1327 RICDLRNPKLDSRSSNHRFQSCSDCVRRE---PEHVTTKVNHHNERATMLHRMHRKTRVA 1157
                L+NPK   R+   R Q  S+   +    P  V +++   N+   ML +M  K    
Sbjct: 578  A---LKNPKYKDRAGKRREQVGSEGTFQRDDAPASVHSEITDSNKGRKMLEKMGWKRGEG 634

Query: 1156 INLMRESQAVRE-IQIQRRTTHAG 1088
            +   ++   ++  IQ+Q R THAG
Sbjct: 635  LG--KDGGGMKTPIQLQLRRTHAG 656

>O35254:GR65_RAT Golgi reassembly-stacking protein 1 - Rattus norvegicus (Rat)|
          Length = 451

 Score = 32.3 bits (72), Expect = 8.9
 Identities = 37/140 (26%), Positives = 53/140 (37%), Gaps = 23/140 (16%)
 Frame = +2

Query: 1700 PSPERIIISAPPP--------------AELRWTAATPHITFGTVSCQVSSPGSPGEDFQT 1837
            P P    + APPP               +  +  A P +  G +  Q+  PGSPG    T
Sbjct: 225  PQPNAFPLGAPPPWPIPQDSSGPELGSRQSDYMEALPQVPGGFMEEQLPGPGSPGHG--T 282

Query: 1838 AKIFGTSHMQQEATTNPAEIHGTLNDG--NQFSVASLDSGQI-------SSLINEPAEVF 1990
            A   G  H  +     P  +   ++ G  +   ++ LDS          SS +  P  V 
Sbjct: 283  ADYGGCLHSMEIPLQPPPPVQRVMDPGFLDVSGMSLLDSNNTSVCPSLSSSSLLTPTAV- 341

Query: 1991 SSPGPEPNCTMDIPSSEEAH 2050
            S+ GPE     DI SS  +H
Sbjct: 342  SALGPE-----DIGSSSSSH 356


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 432,303,139
Number of extensions: 10035436
Number of successful extensions: 28182
Number of sequences better than 10.0: 9
Number of HSP's gapped: 28143
Number of HSP's successfully gapped: 9
Length of query: 768
Length of database: 100,686,439
Length adjustment: 121
Effective length of query: 647
Effective length of database: 67,496,744
Effective search space: 43670393368
Effective search space used: 43670393368
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)