ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf69j14 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC104444.2| Homo sapiens chromosome 3 clone RP11-420K5, complete sequence Length = 161054 Score = 48.1 bits (24), Expect = 0.14 Identities = 27/28 (96%) Strand = Plus / Minus Query: 406 ggaaggagataaggagggaggaaagaga 433 ||||||||| |||||||||||||||||| Sbjct: 85335 ggaaggagagaaggagggaggaaagaga 85308
>gb|AC110576.12| Mus musculus chromosome 8, clone RP23-329K17, complete sequence Length = 224141 Score = 46.1 bits (23), Expect = 0.56 Identities = 26/27 (96%) Strand = Plus / Minus Query: 399 gggaggaggaaggagataaggagggag 425 |||||||||||||||| |||||||||| Sbjct: 55943 gggaggaggaaggagagaaggagggag 55917
>gb|AC133651.4| Mus musculus BAC clone RP24-239C15 from 1, complete sequence Length = 178756 Score = 46.1 bits (23), Expect = 0.56 Identities = 26/27 (96%) Strand = Plus / Plus Query: 405 aggaaggagataaggagggaggaaaga 431 |||||||||| |||||||||||||||| Sbjct: 146454 aggaaggagagaaggagggaggaaaga 146480
>gb|AC122275.4| Mus musculus BAC clone RP23-229G17 from 15, complete sequence Length = 214490 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 403 ggaggaaggagataaggagggag 425 ||||||||||||||||||||||| Sbjct: 97827 ggaggaaggagataaggagggag 97849
>gb|AC161878.3| Mus musculus BAC clone RP23-303B4 from chromosome 1, complete sequence Length = 169556 Score = 46.1 bits (23), Expect = 0.56 Identities = 26/27 (96%) Strand = Plus / Minus Query: 405 aggaaggagataaggagggaggaaaga 431 |||||||||| |||||||||||||||| Sbjct: 96957 aggaaggagagaaggagggaggaaaga 96931
>emb|CR759749.21| Zebrafish DNA sequence from clone DKEY-190H24 in linkage group 10, complete sequence Length = 52662 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1828 ttttcaaactgccaaaattttcggta 1853 |||| ||||||||||||||||||||| Sbjct: 22396 ttttaaaactgccaaaattttcggta 22371
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1606 tgcatcccttcagcaatatgaggttt 1631 |||||||||||||| ||||||||||| Sbjct: 3301019 tgcatcccttcagcgatatgaggttt 3300994
>ref|XM_388564.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08388.1) partial mRNA Length = 1665 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 gggaggaggaaggagataagga 420 |||||||||||||||||||||| Sbjct: 1493 gggaggaggaaggagataagga 1514
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1781 gggacagtttcttgccaagttt 1802 |||||||||||||||||||||| Sbjct: 244601 gggacagtttcttgccaagttt 244580
>emb|BX936358.10| Zebrafish DNA sequence from clone CH211-159A10 in linkage group 3, complete sequence Length = 165674 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1978 tgctgaggttttttcttcccct 1999 |||||||||||||||||||||| Sbjct: 70794 tgctgaggttttttcttcccct 70815
>emb|BX908793.14| Zebrafish DNA sequence from clone DKEY-104G4 in linkage group 3, complete sequence Length = 102377 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1828 ttttcaaactgccaaaattttc 1849 |||||||||||||||||||||| Sbjct: 36456 ttttcaaactgccaaaattttc 36477
>emb|AL390236.21| Human DNA sequence from clone RP11-380J17 on chromosome 10 Contains the 3' end of the PTPRE gene for protein tyrosine phosphatase receptor type E and the 3' end of the MKI67 gene for antigen identified by monoclonal antibody Ki-67, complete sequence Length = 123057 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1341 aggtctcctgcatgcaagttgg 1362 |||||||||||||||||||||| Sbjct: 114368 aggtctcctgcatgcaagttgg 114347
>emb|BX000470.24| Zebrafish DNA sequence from clone DKEY-16N16 in linkage group 1, complete sequence Length = 237809 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1828 ttttcaaactgccaaaattttc 1849 |||||||||||||||||||||| Sbjct: 228971 ttttcaaactgccaaaattttc 228950
>emb|BX649557.8| Zebrafish DNA sequence from clone DKEYP-61G11 in linkage group 3, complete sequence Length = 163934 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1828 ttttcaaactgccaaaattttc 1849 |||||||||||||||||||||| Sbjct: 157347 ttttcaaactgccaaaattttc 157368
>emb|BX936464.7| Zebrafish DNA sequence from clone DKEY-246O4 in linkage group 18, complete sequence Length = 167114 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 400 ggaggaggaaggagataaggagggag 425 |||||||||||||||| ||||||||| Sbjct: 17884 ggaggaggaaggagatgaggagggag 17909
>gb|AF355056.1| Linum usitatissimum putative pectin methylesterase LuPME1 (pme1) mRNA, complete cds Length = 1972 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1744 actccggtggacggcagccacg 1765 |||||||||||||||||||||| Sbjct: 1668 actccggtggacggcagccacg 1647
>emb|AL954331.8| Zebrafish DNA sequence from clone CH211-79E4 in linkage group 7, complete sequence Length = 193627 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 400 ggaggaggaaggagataaggagggag 425 |||||||||||||||| ||||||||| Sbjct: 190100 ggaggaggaaggagatgaggagggag 190125
>gb|AC125210.4| Mus musculus BAC clone RP23-148P22 from 18, complete sequence Length = 210193 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 400 ggaggaggaaggagataaggagggag 425 ||||| |||||||||||||||||||| Sbjct: 139585 ggagggggaaggagataaggagggag 139610
>gb|AC190224.3| Pan troglodytes BAC clone CH251-366C23 from chromosome 7, complete sequence Length = 168932 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 406 ggaaggagataaggagggaggaaag 430 ||||||||| ||||||||||||||| Sbjct: 109066 ggaaggagagaaggagggaggaaag 109042
>gb|EF025894.1| Homo sapiens zonadhesin isoform 6 (ZAN) gene, complete cds, alternatively spliced Length = 63959 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 406 ggaaggagataaggagggaggaaag 430 ||||||||| ||||||||||||||| Sbjct: 59002 ggaaggagagaaggagggaggaaag 59026
>ref|NM_001077197.1| Homo sapiens phosphodiesterase 11A (PDE11A), transcript variant 3, mRNA Length = 8316 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 ttcctgtttttcagccaaaga 587 ||||||||||||||||||||| Sbjct: 219 ttcctgtttttcagccaaaga 199
>dbj|AK242076.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075136I07, full insert sequence Length = 1906 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 873 ttgcttaatttcattgcaatatcat 897 ||||||||| ||||||||||||||| Sbjct: 526 ttgcttaatctcattgcaatatcat 550
>ref|NM_001072505.1| Oryza sativa (japonica cultivar-group) Os12g0112300 (Os12g0112300) mRNA, complete cds Length = 1967 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 873 ttgcttaatttcattgcaatatcat 897 ||||||||| ||||||||||||||| Sbjct: 510 ttgcttaatctcattgcaatatcat 534
>ref|NM_001072102.1| Oryza sativa (japonica cultivar-group) Os11g0112900 (Os11g0112900) mRNA, complete cds Length = 969 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 873 ttgcttaatttcattgcaatatcat 897 ||||||||| ||||||||||||||| Sbjct: 388 ttgcttaatctcattgcaatatcat 412
>ref|XM_001154673.1| PREDICTED: Pan troglodytes phosphodiesterase 11A, transcript variant 1 (PDE11A), mRNA Length = 2296 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 ttcctgtttttcagccaaaga 587 ||||||||||||||||||||| Sbjct: 120 ttcctgtttttcagccaaaga 100
>emb|AM260479.1| Ralstonia eutropha H16 chromosome 1 Length = 4052032 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 gccaggagccaccggagacac 212 ||||||||||||||||||||| Sbjct: 1524879 gccaggagccaccggagacac 1524859
>ref|XM_393903.2| PREDICTED: Apis mellifera similar to CG9005-PA (LOC410423), mRNA Length = 4133 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1014 ccggcacctcctccatcctcg 1034 ||||||||||||||||||||| Sbjct: 810 ccggcacctcctccatcctcg 790
>ref|XM_001066938.1| PREDICTED: Rattus norvegicus hypothetical protein LOC683658 (LOC683658), mRNA Length = 1029 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 401 gaggaggaaggagataaggagggag 425 |||||||||||||| |||||||||| Sbjct: 247 gaggaggaaggagagaaggagggag 271
>gb|AC114650.10| Mus musculus chromosome 3, clone RP24-151O6, complete sequence Length = 185956 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 418 ggagggaggaaagagacacgggaaa 442 |||||||||||||||| |||||||| Sbjct: 151043 ggagggaggaaagagaaacgggaaa 151019
>gb|AC005565.1| Homo sapiens chromosome 16, cosmid clone 444B9 (LANL), complete sequence Length = 39441 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 aggaaggagataaggagggaggaaagaga 433 |||| ||||| |||||||||||||||||| Sbjct: 14769 aggagggagagaaggagggaggaaagaga 14797
>gb|AC109244.11| Mus musculus chromosome 15, clone RP23-459E13, complete sequence Length = 183400 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 405 aggaaggagataaggagggaggaaagaga 433 ||||||||| || |||||||||||||||| Sbjct: 179594 aggaaggaggtagggagggaggaaagaga 179566
>gb|AC139062.10| Mus musculus chromosome 17, clone RP23-69L11, complete sequence Length = 136224 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 403 ggaggaaggagataaggagggagga 427 |||||||||||| |||||||||||| Sbjct: 127164 ggaggaaggagagaaggagggagga 127140
>gb|AC150843.16| Medicago truncatula clone mth2-103p8, complete sequence Length = 125707 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 890 aatatcatagtttaattaactattt 914 ||||||||||||||||| ||||||| Sbjct: 35764 aatatcatagtttaattgactattt 35740
>gb|AC127554.4| Mus musculus BAC clone RP24-323K23 from chromosome 8, complete sequence Length = 178416 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 gggaggaggaaggagataaggagggagga 427 |||||||||||||||| | |||||||||| Sbjct: 159447 gggaggaggaaggagagagggagggagga 159419
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 679 gcccatgtcttcgtctcgccg 699 ||||||||||||||||||||| Sbjct: 2810105 gcccatgtcttcgtctcgccg 2810125
>gb|AC118724.18| Mus musculus, clone RP24-160H20, complete sequence Length = 197860 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 400 ggaggaggaaggagataaggagggaggaa 428 ||||||||||||||||| ||||| ||||| Sbjct: 60950 ggaggaggaaggagatagggaggaaggaa 60978
>gb|AC110245.10| Mus musculus chromosome 3, clone RP23-251B16, complete sequence Length = 241132 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 418 ggagggaggaaagagacacgggaaa 442 |||||||||||||||| |||||||| Sbjct: 205847 ggagggaggaaagagaaacgggaaa 205871
>ref|NG_002960.1| Homo sapiens cytochrome c, somatic pseudogene (HCP9) on chromosome 2 gb|AF533170.1| Homo sapiens isolate HCP9 chromosome 2 cytochrome c pseudogene, complete sequence Length = 11971 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 ttcctgtttttcagccaaaga 587 ||||||||||||||||||||| Sbjct: 127 ttcctgtttttcagccaaaga 107
>gb|AC160461.3| Mus musculus chromosome 15, clone RP23-174B9, complete sequence Length = 208877 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 405 aggaaggagataaggagggaggaaagaga 433 ||||||||| || |||||||||||||||| Sbjct: 1511 aggaaggaggtagggagggaggaaagaga 1483
>gb|AC155718.4| Mus musculus 10 BAC RP24-217J7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 155643 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 401 gaggaggaaggagataaggagggag 425 ||||||||||||||| ||||||||| Sbjct: 153016 gaggaggaaggagattaggagggag 153040
>gb|AC164171.5| Mus musculus 10 BAC RP24-574G7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 147660 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 401 gaggaggaaggagataaggagggag 425 ||||||||||||||| ||||||||| Sbjct: 125393 gaggaggaaggagattaggagggag 125369
>gb|AC027575.13| Homo sapiens chromosome 18, clone RP11-162A12, complete sequence Length = 165447 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 899 gtttaattaactattttaatcacaa 923 |||||| |||||||||||||||||| Sbjct: 78846 gtttaagtaactattttaatcacaa 78870
>gb|AC092385.4| Homo sapiens chromosome 16 clone RP4-597G12, complete sequence Length = 97218 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 aggaaggagataaggagggaggaaagaga 433 |||| ||||| |||||||||||||||||| Sbjct: 72548 aggagggagagaaggagggaggaaagaga 72576
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 873 ttgcttaatttcattgcaatatcat 897 ||||||||| ||||||||||||||| Sbjct: 633120 ttgcttaatctcattgcaatatcat 633144
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 873 ttgcttaatttcattgcaatatcat 897 ||||||||| ||||||||||||||| Sbjct: 596063 ttgcttaatctcattgcaatatcat 596087
>gb|AC020689.8| Homo sapiens chromosome , clone RP11-440M23, complete sequence Length = 214702 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 416 aaggagggaggaaagagacacggga 440 ||||||||||| ||||||||||||| Sbjct: 188908 aaggagggagggaagagacacggga 188932
>emb|Z99916.1|HS221G9 Human DNA sequence from clone CTA-221G9 on chromosome 22q11.21-12.2, complete sequence Length = 102543 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 405 aggaaggagataaggagggaggaaagaga 433 |||||||||| | |||||||||||||||| Sbjct: 28474 aggaaggagaaagggagggaggaaagaga 28446
>dbj|AB048423.2| Homo sapiens PDE11A gene for phosphodiesterase 11A3, phosphodiesterase 11A4, phosphodiesterase 11A1, complete cds Length = 11350 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 ttcctgtttttcagccaaaga 587 ||||||||||||||||||||| Sbjct: 1639 ttcctgtttttcagccaaaga 1619
>dbj|AB038041.1| Homo sapiens PDE11A3 mRNA for phosphodiesterase 11A3, complete cds Length = 3507 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 ttcctgtttttcagccaaaga 587 ||||||||||||||||||||| Sbjct: 219 ttcctgtttttcagccaaaga 199
>emb|AL353680.8| Human DNA sequence from clone RP11-252M21 on chromosome 13 Contains a novel FLJ31073 containing gene, six novel genes and a CpG island, complete sequence Length = 176930 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 401 gaggaggaaggagataaggagggaggaaa 429 ||||||||||||| |||||||||||||| Sbjct: 69413 gaggaggaaggagggaaggagggaggaaa 69385
>gb|AC011998.8| Homo sapiens BAC clone RP11-318F5 from 2, complete sequence Length = 175951 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 567 ttcctgtttttcagccaaaga 587 ||||||||||||||||||||| Sbjct: 152944 ttcctgtttttcagccaaaga 152964
>gb|AC011895.4| Homo sapiens BAC clone RP11-126L15 from 7, complete sequence Length = 172358 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 406 ggaaggagataaggagggaggaaag 430 ||||||||| ||||||||||||||| Sbjct: 37075 ggaaggagagaaggagggaggaaag 37099
>gb|AY046055.1| Homo sapiens zonadhesin (ZAN) gene, complete cds, alternatively spliced Length = 68037 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 406 ggaaggagataaggagggaggaaag 430 ||||||||| ||||||||||||||| Sbjct: 62183 ggaaggagagaaggagggaggaaag 62207
>gb|AC027342.5| Homo sapiens chromosome 5 clone CTD-2294O13, complete sequence Length = 112904 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 962 gtctccctcccacctcccagg 982 ||||||||||||||||||||| Sbjct: 7646 gtctccctcccacctcccagg 7666
>emb|CR536602.5| Zebrafish DNA sequence from clone bGZ-160O4, complete sequence Length = 85135 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1201 tttcattatggtgatttactt 1221 ||||||||||||||||||||| Sbjct: 16569 tttcattatggtgatttactt 16549
>gb|AF312032.1|AF312032 Homo sapiens acetylcholinesterase (ACHE) gene, partial cds; ASR2 (ASR2) gene, complete cds, alternatively spliced; thyroid receptor interacting protein 6 (TRIP6) gene, complete cds; cation-chloride cotransporter (CIP1) gene, complete cds, alternatively spliced; ephrin type-B receptor 4 precursor (EPHB4) and zonadhesin (ZAN) genes, complete cds; and unknown gene Length = 117962 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 406 ggaaggagataaggagggaggaaag 430 ||||||||| ||||||||||||||| Sbjct: 95452 ggaaggagagaaggagggaggaaag 95428
>gb|AC102022.8| Mus musculus chromosome 8, clone RP24-67K5, complete sequence Length = 156728 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 gggaggaggaaggagataaggagggagga 427 |||||||||||||||| | |||||||||| Sbjct: 150021 gggaggaggaaggagagagggagggagga 150049
>gb|AC021534.19| Homo sapiens chromosome 17, clone RP11-398J5, complete sequence Length = 185419 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 416 aaggagggaggaaagagacacggga 440 ||||||||||| ||||||||||||| Sbjct: 58214 aaggagggagggaagagacacggga 58238
>gb|AC013472.8| Homo sapiens BAC clone RP11-503P10 from 2, complete sequence Length = 149481 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2029 tccttcctctgaggaggccca 2049 ||||||||||||||||||||| Sbjct: 123656 tccttcctctgaggaggccca 123636
>dbj|AK068723.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158K12, full insert sequence Length = 1968 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 873 ttgcttaatttcattgcaatatcat 897 ||||||||| ||||||||||||||| Sbjct: 511 ttgcttaatctcattgcaatatcat 535
>gb|AF058984.1|AF058984 Scaptodrosophila lebanonensis xanthine dehydrogenase (Xdh) gene, partial cds Length = 2157 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 ggagctcttctgttccacaca 51 ||||||||||||||||||||| Sbjct: 765 ggagctcttctgttccacaca 785
>emb|AJ278682.1|HSA278682 Homo sapiens mRNA for cAMP/cGMP cyclic nucleotide phosphodiesterase 11A3 (PDE11A3 gene) Length = 2502 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 ttcctgtttttcagccaaaga 587 ||||||||||||||||||||| Sbjct: 262 ttcctgtttttcagccaaaga 242
>gb|AC146694.12| Pan troglodytes clone rp43-178l17, complete sequence Length = 229508 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 405 aggaaggagataaggagggaggaaagaga 433 |||||||||| | |||||||||||||||| Sbjct: 109417 aggaaggagaaagggagggaggaaagaga 109389
>emb|AL772404.5| Mouse DNA sequence from clone RP23-374O4 on chromosome 2, complete sequence Length = 157345 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 gggaggaggaaggagataaggagggagga 427 ||||||||||||| || |||||||||||| Sbjct: 127645 gggaggaggaaggggagaaggagggagga 127617
>gb|AC147973.3| Gallus gallus BAC clone CH261-44G9 from chromosome unknown, complete sequence Length = 196590 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1321 agattcggttttctccttcaaggtctcct 1349 |||||| ||||||||||||||| |||||| Sbjct: 185252 agattcagttttctccttcaagttctcct 185224
>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 181322 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 873 ttgcttaatttcattgcaatatcat 897 ||||||||| ||||||||||||||| Sbjct: 146909 ttgcttaatctcattgcaatatcat 146885
>emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769_D07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 115859 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 873 ttgcttaatttcattgcaatatcat 897 ||||||||| ||||||||||||||| Sbjct: 15723 ttgcttaatctcattgcaatatcat 15699
>emb|AL627186.13| Mouse DNA sequence from clone RP23-413I9 on chromosome 4, complete sequence Length = 180246 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 418 ggagggaggaaagagacacgggaaa 442 |||||||||||||||||| |||||| Sbjct: 45888 ggagggaggaaagagacaggggaaa 45864
>emb|AL807764.9| Mouse DNA sequence from clone RP23-400F8 on chromosome 4, complete sequence Length = 226637 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 102 ctcctctccactccctagcccctcc 126 ||||||||| ||||||||||||||| Sbjct: 194671 ctcctctcctctccctagcccctcc 194695
>gb|AC165153.2| Mus musculus BAC clone RP23-359L1 from chromosome 17, complete sequence Length = 219548 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 403 ggaggaaggagataaggagggagga 427 |||||||||||| |||||||||||| Sbjct: 42702 ggaggaaggagagaaggagggagga 42726
>emb|AL929142.6| Mouse DNA sequence from clone RP23-340A13 on chromosome 2, complete sequence Length = 207823 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 407 gaaggagataaggagggaggaaaga 431 |||||||| |||||||||||||||| Sbjct: 198412 gaaggagaaaaggagggaggaaaga 198436 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 402,456,339 Number of extensions: 20978042 Number of successful extensions: 113839 Number of sequences better than 10.0: 71 Number of HSP's gapped: 113839 Number of HSP's successfully gapped: 71 Length of query: 2304 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2281 Effective length of database: 18,503,978,556 Effective search space: 42207575086236 Effective search space used: 42207575086236 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
