ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf66k10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009106.1| Triticum aestivum clone wkm2n.pk008.p10:fis, full insert mRNA sequence Length = 1078 Score = 910 bits (459), Expect = 0.0 Identities = 658/722 (91%), Gaps = 13/722 (1%) Strand = Plus / Plus Query: 151 ggctgccgcctggcgaacctcgccgtagtctgaacggccagggaggggggcagcgaggcg 210 |||||||||||| |||||||||||| ||||||||||| |||| |||||| |||||| Sbjct: 168 ggctgccgcctgttgaacctcgccgtggtctgaacggctaggg----gggcagtgaggcg 223 Query: 211 gcggcgccaggggataatcagaaggaa---tgtcgtcgtcgggccagatcgcaccggcag 267 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 224 gcggcgccaggggataatcagaaggaagaatgtcgtcgtcgggccagatcacaccggcag 283 Query: 268 aacaagtctgctacgtccactgcaacttctgcaacaccgtactcgcggtgagtgtccctg 327 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 aagaagtctgctacgtgcactgcaacttctgcaacaccgtactcgcggtgagtgtccctg 343 Query: 328 ggaacagcatgttcaacgtcgtgacggtccggtgtgggcactgcacgaacctgctttcgg 387 ||||||||||| ||||| ||||||| |||||||| ||||||||||| ||||| ||||||| Sbjct: 344 ggaacagcatgctcaacatcgtgacagtccggtgcgggcactgcacaaacctactttcgg 403 Query: 388 tgagcctgagagggcaggtgcactcgccgctccctgctgctgcacaggcccaggagagca 447 ||||||||||||||||| ||||||| ||| ||||| |||| ||||||| ||||||||||| Sbjct: 404 tgagcctgagagggcagatgcactcaccggtccctcctgcggcacaggtccaggagagca 463 Query: 448 gcctgggcaagcccagtggcatcaacggcttcattcgtgatcac---agcgtctacaatc 504 ||||| ||||||||| ||||| |||||||||||||||||| ||| |||| ||||||| Sbjct: 464 gcctgagcaagcccaatggcagcaacggcttcattcgtgaccacggcagcgcctacaata 523 Query: 505 acccggagtttggttcctcttccacgtc---gtcctccaaattccagctgcccacgatga 561 ||||||||||| ||| ||||| | || ||| |||||||||| | |||| ||||||| Sbjct: 524 gcccggagtttgcttcgtcttcttcttcatcgtcgtccaaattccggatgccgacgatga 583 Query: 562 tgttctcctcgcaaaacgatctgctgcatgaacagacgctacacgcacgccctccggaga 621 ||||||| |||||||||||||||||||| || || ||||| |||||||| ||||| |||| Sbjct: 584 tgttctcatcgcaaaacgatctgctgcaggagcaaacgctgcacgcacgtcctcctgaga 643 Query: 622 agaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagatacgaaggatca 681 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 644 agaggcagcgtgttccttcggcgtacaacagattcatcaaggaagagatacgaaggatca 703 Query: 682 aagcaaacaaccccgacattagccacagggaagccttcagcactgccgcaaagaactggg 741 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 704 aagcaaacaaccccgacattagccacagggaagctttcagcactgccgcaaagaactggg 763 Query: 742 cacattacccaaacatccacttcgggctaaaccccgggagcgacggtggcaagaggctcg 801 ||||||| ||||||||||| ||||| |||||||||| | ||||||||||||||||||||| Sbjct: 764 cacattatccaaacatccatttcggtctaaaccccgagcgcgacggtggcaagaggctcg 823 Query: 802 ccgtcgacgatgccgcgccggctgccaagaagatccaaggtttctgttcatagacacgac 861 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 824 ccgtcgacgatgccgcgccggctgccaagaagatccaaggtttctgttcatagacacgac 883 Query: 862 gg 863 || Sbjct: 884 gg 885 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/65 (87%), Gaps = 2/65 (3%) Strand = Plus / Plus Query: 47 catcgatctgacctacatacacacagagaaagatagagaagcagcagtcgtacatgtaac 106 ||||||||| ||||||| ||| |||||||||| |||||||||||||| | |||||||| Sbjct: 68 catcgatctaacctaca--cacccagagaaagagagagaagcagcagtagctcatgtaac 125 Query: 107 ctagc 111 ||||| Sbjct: 126 ctagc 130 Score = 48.1 bits (24), Expect = 0.067 Identities = 53/62 (85%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 939 tacgtactgcatgtgagtaactaaagaagcaacagaaaaaagaagaagtcgctacgtacc 998 ||||||| |||||||||||| |||||| |||| ||||| ||||||||||||||||| Sbjct: 948 tacgtaccgcatgtgagtaagtaaagatgcaaaggaaaa---gagaagtcgctacgtacc 1004 Query: 999 tt 1000 || Sbjct: 1005 tt 1006 Score = 42.1 bits (21), Expect = 4.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 aattcctccttcctctccgcccatacata 30 |||| |||||||||||| ||||||||||| Sbjct: 25 aatttctccttcctctctgcccatacata 53
>gb|AY103851.1| Zea mays PCO127567 mRNA sequence Length = 1415 Score = 188 bits (95), Expect = 3e-44 Identities = 161/183 (87%) Strand = Plus / Plus Query: 613 ctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagatac 672 |||| |||||||||||||| ||||| || ||||| ||||||||||||||||||||||| | Sbjct: 810 ctcctgagaagaggcagcgggttccgtcggcgtataacagattcatcaaggaagagattc 869 Query: 673 gaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgcaa 732 | |||||||| || |||||||||||||||||||||||||||||||||||||| || || | Sbjct: 870 gcaggatcaaggcgaacaaccccgacattagccacagggaagccttcagcacagcagcca 929 Query: 733 agaactgggcacattacccaaacatccacttcgggctaaaccccgggagcgacggtggca 792 |||||||||||||||| || |||||||| ||||| ||||| |||| | || ||||||| Sbjct: 930 agaactgggcacattatccgaacatccatttcggcttaaactccggccgagagggtggca 989 Query: 793 aga 795 ||| Sbjct: 990 aga 992 Score = 119 bits (60), Expect = 2e-23 Identities = 114/132 (86%) Strand = Plus / Plus Query: 242 gtcgtcgggccagatcgcaccggcagaacaagtctgctacgtccactgcaacttctgcaa 301 |||||||| ||| ||||| ||||| || || || ||||| || ||||||||||||||||| Sbjct: 442 gtcgtcggcccaaatcgcgccggcggaccatgtgtgctatgtgcactgcaacttctgcaa 501 Query: 302 caccgtactcgcggtgagtgtccctgggaacagcatgttcaacgtcgtgacggtccggtg 361 ||| || ||||||||||||||||| |||||||||||| ||| | | ||||| || ||||| Sbjct: 502 cacagttctcgcggtgagtgtcccggggaacagcatgctcagcatggtgacagttcggtg 561 Query: 362 tgggcactgcac 373 |||||||||||| Sbjct: 562 tgggcactgcac 573
>emb|CT830040.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA015F11, full insert sequence Length = 967 Score = 182 bits (92), Expect = 2e-42 Identities = 137/152 (90%) Strand = Plus / Plus Query: 609 cgccctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagag 668 |||||||| ||||||||||| | || ||||| || || |||||||| || ||||||||| Sbjct: 617 cgccctccagagaagaggcaaagggtaccttcagcctataacagatttattaaggaagag 676 Query: 669 atacgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgcc 728 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 677 atacgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcacagca 736 Query: 729 gcaaagaactgggcacattacccaaacatcca 760 || ||||| ||||||||||| ||||||||||| Sbjct: 737 gccaagaattgggcacattatccaaacatcca 768 Score = 139 bits (70), Expect = 2e-29 Identities = 130/150 (86%) Strand = Plus / Plus Query: 251 ccagatcgcaccggcagaacaagtctgctacgtccactgcaacttctgcaacaccgtact 310 ||||||||| |||||||| ||||| ||||| || |||||||||||||||||||| | || Sbjct: 256 ccagatcgctccggcagagcaagtgtgctatgtgcactgcaacttctgcaacacgattct 315 Query: 311 cgcggtgagtgtccctgggaacagcatgttcaacgtcgtgacggtccggtgtgggcactg 370 ||||||||||||||| || ||||||||| | ||| ||||||| || |||||||||||||| Sbjct: 316 cgcggtgagtgtcccaggaaacagcatgctgaacatcgtgaccgtgcggtgtgggcactg 375 Query: 371 cacgaacctgctttcggtgagcctgagagg 400 |||||| ||||| || |||| | ||||||| Sbjct: 376 cacgaatctgctgtcagtgaacgtgagagg 405 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 826 ccaagaagatccaaggtttctgttcataga 855 ||||||||||||||||||||| ||||||| Sbjct: 843 ccaagaagatccaaggtttctactcataga 872
>emb|CT829139.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA051K22, full insert sequence Length = 952 Score = 182 bits (92), Expect = 2e-42 Identities = 137/152 (90%) Strand = Plus / Plus Query: 609 cgccctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagag 668 |||||||| ||||||||||| | || ||||| || || |||||||| || ||||||||| Sbjct: 607 cgccctccagagaagaggcaaagggtaccttcagcctataacagatttattaaggaagag 666 Query: 669 atacgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgcc 728 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 667 atacgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcacagca 726 Query: 729 gcaaagaactgggcacattacccaaacatcca 760 || ||||| ||||||||||| ||||||||||| Sbjct: 727 gccaagaattgggcacattatccaaacatcca 758 Score = 147 bits (74), Expect = 1e-31 Identities = 131/150 (87%) Strand = Plus / Plus Query: 251 ccagatcgcaccggcagaacaagtctgctacgtccactgcaacttctgcaacaccgtact 310 ||||||||| |||||||| ||||| ||||| || |||||||||||||||||||| | || Sbjct: 246 ccagatcgctccggcagagcaagtgtgctatgtgcactgcaacttctgcaacacgattct 305 Query: 311 cgcggtgagtgtccctgggaacagcatgttcaacgtcgtgacggtccggtgtgggcactg 370 ||||||||||||||| || ||||||||| | ||| ||||||| ||||||||||||||||| Sbjct: 306 cgcggtgagtgtcccaggaaacagcatgctgaacatcgtgaccgtccggtgtgggcactg 365 Query: 371 cacgaacctgctttcggtgagcctgagagg 400 |||||| ||||| || |||| | ||||||| Sbjct: 366 cacgaatctgctgtcagtgaacttgagagg 395 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 826 ccaagaagatccaaggtttctgttcataga 855 ||||||||||||||||||||| ||||||| Sbjct: 833 ccaagaagatccaaggtttctactcataga 862
>ref|NM_001073831.1| Oryza sativa (japonica cultivar-group) Os12g0621100 (Os12g0621100) mRNA, complete cds Length = 1495 Score = 182 bits (92), Expect = 2e-42 Identities = 137/152 (90%) Strand = Plus / Plus Query: 609 cgccctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagag 668 |||||||| ||||||||||| | || ||||| || || |||||||| || ||||||||| Sbjct: 916 cgccctccagagaagaggcaaagggtaccttcagcctataacagatttattaaggaagag 975 Query: 669 atacgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgcc 728 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 976 atacgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcacagca 1035 Query: 729 gcaaagaactgggcacattacccaaacatcca 760 || ||||| ||||||||||| ||||||||||| Sbjct: 1036 gccaagaattgggcacattatccaaacatcca 1067 Score = 147 bits (74), Expect = 1e-31 Identities = 131/150 (87%) Strand = Plus / Plus Query: 251 ccagatcgcaccggcagaacaagtctgctacgtccactgcaacttctgcaacaccgtact 310 ||||||||| |||||||| ||||| ||||| || |||||||||||||||||||| | || Sbjct: 555 ccagatcgctccggcagagcaagtgtgctatgtgcactgcaacttctgcaacacgattct 614 Query: 311 cgcggtgagtgtccctgggaacagcatgttcaacgtcgtgacggtccggtgtgggcactg 370 ||||||||||||||| || ||||||||| | ||| ||||||| ||||||||||||||||| Sbjct: 615 cgcggtgagtgtcccaggaaacagcatgctgaacatcgtgaccgtccggtgtgggcactg 674 Query: 371 cacgaacctgctttcggtgagcctgagagg 400 |||||| ||||| || |||| | ||||||| Sbjct: 675 cacgaatctgctgtcagtgaacttgagagg 704 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 826 ccaagaagatccaaggtttctgttcataga 855 ||||||||||||||||||||| ||||||| Sbjct: 1142 ccaagaagatccaaggtttctactcataga 1171
>dbj|AK104918.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-F07, full insert sequence Length = 1360 Score = 182 bits (92), Expect = 2e-42 Identities = 137/152 (90%) Strand = Plus / Plus Query: 609 cgccctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagag 668 |||||||| ||||||||||| | || ||||| || || |||||||| || ||||||||| Sbjct: 727 cgccctccagagaagaggcaaagggtaccttcagcctataacagatttattaaggaagag 786 Query: 669 atacgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgcc 728 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 787 atacgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcacagca 846 Query: 729 gcaaagaactgggcacattacccaaacatcca 760 || ||||| ||||||||||| ||||||||||| Sbjct: 847 gccaagaattgggcacattatccaaacatcca 878 Score = 147 bits (74), Expect = 1e-31 Identities = 131/150 (87%) Strand = Plus / Plus Query: 251 ccagatcgcaccggcagaacaagtctgctacgtccactgcaacttctgcaacaccgtact 310 ||||||||| |||||||| ||||| ||||| || |||||||||||||||||||| | || Sbjct: 366 ccagatcgctccggcagagcaagtgtgctatgtgcactgcaacttctgcaacacgattct 425 Query: 311 cgcggtgagtgtccctgggaacagcatgttcaacgtcgtgacggtccggtgtgggcactg 370 ||||||||||||||| || ||||||||| | ||| ||||||| ||||||||||||||||| Sbjct: 426 cgcggtgagtgtcccaggaaacagcatgctgaacatcgtgaccgtccggtgtgggcactg 485 Query: 371 cacgaacctgctttcggtgagcctgagagg 400 |||||| ||||| || |||| | ||||||| Sbjct: 486 cacgaatctgctgtcagtgaacttgagagg 515 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 826 ccaagaagatccaaggtttctgttcataga 855 ||||||||||||||||||||| ||||||| Sbjct: 953 ccaagaagatccaaggtttctactcataga 982
>dbj|AK070737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061C09, full insert sequence Length = 1496 Score = 174 bits (88), Expect = 4e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 609 cgccctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagag 668 |||||||| ||||||||||| | || ||||| || || |||||||| || ||||||||| Sbjct: 917 cgccctccagagaagaggcaaagggtaccttcagcctataacagatttattaaggaagag 976 Query: 669 atacgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgcc 728 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 977 atacgaaggatcaaagcaaacagccccgacattagccacagggaagccttcagcacagca 1036 Query: 729 gcaaagaactgggcacattacccaaacatcca 760 || ||||| ||||||||||| ||||||||||| Sbjct: 1037 gccaagaattgggcacattatccaaacatcca 1068 Score = 147 bits (74), Expect = 1e-31 Identities = 131/150 (87%) Strand = Plus / Plus Query: 251 ccagatcgcaccggcagaacaagtctgctacgtccactgcaacttctgcaacaccgtact 310 ||||||||| |||||||| ||||| ||||| || |||||||||||||||||||| | || Sbjct: 556 ccagatcgctccggcagagcaagtgtgctatgtgcactgcaacttctgcaacacgattct 615 Query: 311 cgcggtgagtgtccctgggaacagcatgttcaacgtcgtgacggtccggtgtgggcactg 370 ||||||||||||||| || ||||||||| | ||| ||||||| ||||||||||||||||| Sbjct: 616 cgcggtgagtgtcccaggaaacagcatgctgaacatcgtgaccgtccggtgtgggcactg 675 Query: 371 cacgaacctgctttcggtgagcctgagagg 400 |||||| ||||| || |||| | ||||||| Sbjct: 676 cacgaatctgctgtcagtgaacttgagagg 705 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 826 ccaagaagatccaaggtttctgttcataga 855 ||||||||||||||||||||| ||||||| Sbjct: 1143 ccaagaagatccaaggtttctactcataga 1172
>ref|NM_001057318.1| Oryza sativa (japonica cultivar-group) Os03g0650000 (Os03g0650000) mRNA, complete cds Length = 1257 Score = 151 bits (76), Expect = 6e-33 Identities = 136/156 (87%) Strand = Plus / Plus Query: 612 cctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagata 671 ||||| |||||||||||||| |||||||| || || |||||||| |||||||||||||| Sbjct: 720 cctccagagaagaggcagcgggttccttcagcttataacagatttatcaaggaagagatc 779 Query: 672 cgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgca 731 || ||||| ||||||||||| || ||||| |||||||| ||||||||||| ||||| ||| Sbjct: 780 cggaggataaaagcaaacaatcctgacataagccacagagaagccttcagtactgcagca 839 Query: 732 aagaactgggcacattacccaaacatccacttcggg 767 ||||| ||||| |||| ||| |||||||| |||||| Sbjct: 840 aagaattgggcgcatttcccgaacatccatttcggg 875 Score = 52.0 bits (26), Expect = 0.004 Identities = 80/98 (81%) Strand = Plus / Plus Query: 276 tgctacgtccactgcaacttctgcaacaccgtactcgcggtgagtgtccctgggaacagc 335 |||||||| |||||||||||||||||||| | ||||||| ||||| || | || ||| Sbjct: 432 tgctacgtgcactgcaacttctgcaacacaattttcgcggtcagtgttccaagcaatagc 491 Query: 336 atgttcaacgtcgtgacggtccggtgtgggcactgcac 373 ||| | ||| ||||||| ||||| ||||| || ||||| Sbjct: 492 atgctaaacatcgtgaccgtccgttgtggccattgcac 529
>dbj|AK070479.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050P10, full insert sequence Length = 1141 Score = 151 bits (76), Expect = 6e-33 Identities = 136/156 (87%) Strand = Plus / Plus Query: 612 cctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagata 671 ||||| |||||||||||||| |||||||| || || |||||||| |||||||||||||| Sbjct: 604 cctccagagaagaggcagcgggttccttcagcttataacagatttatcaaggaagagatc 663 Query: 672 cgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgca 731 || ||||| ||||||||||| || ||||| |||||||| ||||||||||| ||||| ||| Sbjct: 664 cggaggataaaagcaaacaatcctgacataagccacagagaagccttcagtactgcagca 723 Query: 732 aagaactgggcacattacccaaacatccacttcggg 767 ||||| ||||| |||| ||| |||||||| |||||| Sbjct: 724 aagaattgggcgcatttcccgaacatccatttcggg 759 Score = 52.0 bits (26), Expect = 0.004 Identities = 80/98 (81%) Strand = Plus / Plus Query: 276 tgctacgtccactgcaacttctgcaacaccgtactcgcggtgagtgtccctgggaacagc 335 |||||||| |||||||||||||||||||| | ||||||| ||||| || | || ||| Sbjct: 316 tgctacgtgcactgcaacttctgcaacacaattttcgcggtcagtgttccaagcaatagc 375 Query: 336 atgttcaacgtcgtgacggtccggtgtgggcactgcac 373 ||| | ||| ||||||| ||||| ||||| || ||||| Sbjct: 376 atgctaaacatcgtgaccgtccgttgtggccattgcac 413
>gb|AF098753.1|AF098753 Oryza sativa clone FIL2 unknown mRNA Length = 738 Score = 151 bits (76), Expect = 6e-33 Identities = 136/156 (87%) Strand = Plus / Plus Query: 612 cctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagata 671 ||||| |||||||||||||| |||||||| || || |||||||| |||||||||||||| Sbjct: 425 cctccagagaagaggcagcgggttccttcagcttataacagatttatcaaggaagagatc 484 Query: 672 cgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgca 731 || ||||| ||||||||||| || ||||| |||||||| ||||||||||| ||||| ||| Sbjct: 485 cggaggataaaagcaaacaatcctgacataagccacagagaagccttcagtactgcagca 544 Query: 732 aagaactgggcacattacccaaacatccacttcggg 767 ||||| ||||| |||| ||| |||||||| |||||| Sbjct: 545 aagaattgggcgcatttcccgaacatccatttcggg 580 Score = 52.0 bits (26), Expect = 0.004 Identities = 80/98 (81%) Strand = Plus / Plus Query: 276 tgctacgtccactgcaacttctgcaacaccgtactcgcggtgagtgtccctgggaacagc 335 |||||||| |||||||||||||||||||| | ||||||| ||||| || | || ||| Sbjct: 137 tgctacgtgcactgcaacttctgcaacacaattttcgcggtcagtgttccaagcaatagc 196 Query: 336 atgttcaacgtcgtgacggtccggtgtgggcactgcac 373 ||| | ||| ||||||| ||||| ||||| || ||||| Sbjct: 197 atgctaaacatcgtgaccgtccgttgtggccattgcac 234
>dbj|AK070258.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044A02, full insert sequence Length = 1257 Score = 143 bits (72), Expect = 2e-30 Identities = 135/156 (86%) Strand = Plus / Plus Query: 612 cctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagata 671 ||||| |||||||||||||| |||||||| || || |||||||| |||||||||||||| Sbjct: 720 cctccagagaagaggcagcgggttccttcagcttataacagatttatcaaggaagagatc 779 Query: 672 cgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgca 731 || |||| ||||||||||| || ||||| |||||||| ||||||||||| ||||| ||| Sbjct: 780 cgggggataaaagcaaacaatcctgacataagccacagagaagccttcagtactgcagca 839 Query: 732 aagaactgggcacattacccaaacatccacttcggg 767 ||||| ||||| |||| ||| |||||||| |||||| Sbjct: 840 aagaattgggcgcatttcccgaacatccatttcggg 875 Score = 52.0 bits (26), Expect = 0.004 Identities = 80/98 (81%) Strand = Plus / Plus Query: 276 tgctacgtccactgcaacttctgcaacaccgtactcgcggtgagtgtccctgggaacagc 335 |||||||| |||||||||||||||||||| | ||||||| ||||| || | || ||| Sbjct: 432 tgctacgtgcactgcaacttctgcaacacaattttcgcggtcagtgttccaagcaatagc 491 Query: 336 atgttcaacgtcgtgacggtccggtgtgggcactgcac 373 ||| | ||| ||||||| ||||| ||||| || ||||| Sbjct: 492 atgctaaacatcgtgaccgtccgttgtggccattgcac 529
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 125 bits (63), Expect = 4e-25 Identities = 63/63 (100%) Strand = Plus / Plus Query: 662 ggaagagatacgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcag 721 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26519315 ggaagagatacgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcag 26519374 Query: 722 cac 724 ||| Sbjct: 26519375 cac 26519377 Score = 85.7 bits (43), Expect = 3e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 314 ggtgagtgtccctgggaacagcatgttcaacgtcgtgacggtccggtgtgggcactgcac 373 |||||||||||| || ||||||||| | ||| ||||||| |||||||||||||||||||| Sbjct: 26516316 ggtgagtgtcccaggaaacagcatgctgaacatcgtgaccgtccggtgtgggcactgcac 26516375 Query: 374 gaacctgctttcggtgagcctgagagg 400 ||| ||||| || |||| | ||||||| Sbjct: 26516376 gaatctgctgtcagtgaacttgagagg 26516402 Score = 67.9 bits (34), Expect = 7e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 251 ccagatcgcaccggcagaacaagtctgctacgtccactgcaacttctgcaacac 304 ||||||||| |||||||| ||||| ||||| || |||||||||||||||||||| Sbjct: 26511748 ccagatcgctccggcagagcaagtgtgctatgtgcactgcaacttctgcaacac 26511801 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 826 ccaagaagatccaaggtttctgttcataga 855 ||||||||||||||||||||| ||||||| Sbjct: 26520445 ccaagaagatccaaggtttctactcataga 26520474
>emb|AL732532.4|CNS08C97 Oryza sativa chromosome 12, . BAC OSJNBa0027I07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146366 Score = 125 bits (63), Expect = 4e-25 Identities = 63/63 (100%) Strand = Plus / Minus Query: 662 ggaagagatacgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcag 721 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22761 ggaagagatacgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcag 22702 Query: 722 cac 724 ||| Sbjct: 22701 cac 22699 Score = 85.7 bits (43), Expect = 3e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 314 ggtgagtgtccctgggaacagcatgttcaacgtcgtgacggtccggtgtgggcactgcac 373 |||||||||||| || ||||||||| | ||| ||||||| |||||||||||||||||||| Sbjct: 25760 ggtgagtgtcccaggaaacagcatgctgaacatcgtgaccgtccggtgtgggcactgcac 25701 Query: 374 gaacctgctttcggtgagcctgagagg 400 ||| ||||| || |||| | ||||||| Sbjct: 25700 gaatctgctgtcagtgaacttgagagg 25674 Score = 67.9 bits (34), Expect = 7e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 251 ccagatcgcaccggcagaacaagtctgctacgtccactgcaacttctgcaacac 304 ||||||||| |||||||| ||||| ||||| || |||||||||||||||||||| Sbjct: 30328 ccagatcgctccggcagagcaagtgtgctatgtgcactgcaacttctgcaacac 30275 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 826 ccaagaagatccaaggtttctgttcataga 855 ||||||||||||||||||||| ||||||| Sbjct: 21631 ccaagaagatccaaggtttctactcataga 21602
>gb|AY105367.1| Zea mays PCO137297 mRNA sequence Length = 500 Score = 97.6 bits (49), Expect = 8e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 618 gagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagatacgaagg 677 |||||||| ||||| ||||| || || ||||||||||||||||||||||| |||| |||| Sbjct: 50 gagaagagacagcgtgttccatcagcatacaacagattcatcaaggaagaaatacaaagg 109 Query: 678 atcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgcaaagaac 737 || || | | |||||| || ||||||||||||||||| ||||| |||| |||||||| Sbjct: 110 ataaagacgagcaacccagagattagccacagggaagcattcagtgctgcagcaaagaat 169 Query: 738 tgggc 742 ||||| Sbjct: 170 tgggc 174
>emb|CT828683.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA249C03, full insert sequence Length = 1058 Score = 81.8 bits (41), Expect = 5e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 618 gagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagatacgaagg 677 ||||| || ||||| || || ||||| |||||||||||||||||||| ||||||| ||| Sbjct: 446 gagaaaagacagcgtgtcccatctgcatacaacagattcatcaaggaggagatacagagg 505 Query: 678 atcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgcaaagaac 737 || ||| | | ||| || || |||||||||||||| || ||||| |||| ||||||||| Sbjct: 506 attaaaaccagcaatcctgagattagccacagggaggcattcagtgctgctgcaaagaac 565 Query: 738 tgggc 742 ||||| Sbjct: 566 tgggc 570
>emb|CT828682.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA240F12, full insert sequence Length = 1045 Score = 81.8 bits (41), Expect = 5e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 618 gagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagatacgaagg 677 ||||| || ||||| || || ||||| |||||||||||||||||||| ||||||| ||| Sbjct: 450 gagaaaagacagcgtgtcccatctgcatacaacagattcatcaaggaggagatacagagg 509 Query: 678 atcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgcaaagaac 737 || ||| | | ||| || || |||||||||||||| || ||||| |||| ||||||||| Sbjct: 510 attaaaaccagcaatcctgagattagccacagggaggcattcagtgctgctgcaaagaac 569 Query: 738 tgggc 742 ||||| Sbjct: 570 tgggc 574
>emb|CT828681.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA230C13, full insert sequence Length = 1125 Score = 81.8 bits (41), Expect = 5e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 618 gagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagatacgaagg 677 ||||| || ||||| || || ||||| |||||||||||||||||||| ||||||| ||| Sbjct: 447 gagaaaagacagcgtgtcccatctgcatacaacagattcatcaaggaggagatacagagg 506 Query: 678 atcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgcaaagaac 737 || ||| | | ||| || || |||||||||||||| || ||||| |||| ||||||||| Sbjct: 507 attaaaaccagcaatcctgagattagccacagggaggcattcagtgctgctgcaaagaac 566 Query: 738 tgggc 742 ||||| Sbjct: 567 tgggc 571
>emb|CT832577.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA333Z37, full insert sequence Length = 927 Score = 81.8 bits (41), Expect = 5e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 618 gagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagatacgaagg 677 ||||| || ||||| || || ||||| |||||||||||||||||||| ||||||| ||| Sbjct: 449 gagaaaagacagcgtgtcccatctgcatacaacagattcatcaaggaggagatacagagg 508 Query: 678 atcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgcaaagaac 737 || ||| | | ||| || || |||||||||||||| || ||||| |||| ||||||||| Sbjct: 509 attaaaaccagcaatcctgagattagccacagggaggcattcagtgctgctgcaaagaac 568 Query: 738 tgggc 742 ||||| Sbjct: 569 tgggc 573
>ref|NM_001065472.1| Oryza sativa (japonica cultivar-group) Os07g0160100 (Os07g0160100) mRNA, complete cds Length = 1143 Score = 81.8 bits (41), Expect = 5e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 618 gagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagatacgaagg 677 ||||| || ||||| || || ||||| |||||||||||||||||||| ||||||| ||| Sbjct: 538 gagaaaagacagcgtgtcccatctgcatacaacagattcatcaaggaggagatacagagg 597 Query: 678 atcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgcaaagaac 737 || ||| | | ||| || || |||||||||||||| || ||||| |||| ||||||||| Sbjct: 598 attaaaaccagcaatcctgagattagccacagggaggcattcagtgctgctgcaaagaac 657 Query: 738 tgggc 742 ||||| Sbjct: 658 tgggc 662
>dbj|AK100222.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047G10, full insert sequence Length = 1809 Score = 81.8 bits (41), Expect = 5e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 618 gagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagatacgaagg 677 ||||| || ||||| || || ||||| |||||||||||||||||||| ||||||| ||| Sbjct: 1124 gagaaaagacagcgtgtcccatctgcatacaacagattcatcaaggaggagatacagagg 1183 Query: 678 atcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgcaaagaac 737 || ||| | | ||| || || |||||||||||||| || ||||| |||| ||||||||| Sbjct: 1184 attaaaaccagcaatcctgagattagccacagggaggcattcagtgctgctgcaaagaac 1243 Query: 738 tgggc 742 ||||| Sbjct: 1244 tgggc 1248
>dbj|AK070045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038F18, full insert sequence Length = 958 Score = 81.8 bits (41), Expect = 5e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 618 gagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagatacgaagg 677 ||||| || ||||| || || ||||| |||||||||||||||||||| ||||||| ||| Sbjct: 451 gagaaaagacagcgtgtcccatctgcatacaacagattcatcaaggaggagatacagagg 510 Query: 678 atcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgcaaagaac 737 || ||| | | ||| || || |||||||||||||| || ||||| |||| ||||||||| Sbjct: 511 attaaaaccagcaatcctgagattagccacagggaggcattcagtgctgctgcaaagaac 570 Query: 738 tgggc 742 ||||| Sbjct: 571 tgggc 575
>gb|AF098752.1|AF098752 Oryza sativa clone FIL1 unknown mRNA Length = 1157 Score = 81.8 bits (41), Expect = 5e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 618 gagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagatacgaagg 677 ||||| || ||||| || || ||||| |||||||||||||||||||| ||||||| ||| Sbjct: 538 gagaaaagacagcgtgtcccatctgcatacaacagattcatcaaggaggagatacagagg 597 Query: 678 atcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgcaaagaac 737 || ||| | | ||| || || |||||||||||||| || ||||| |||| ||||||||| Sbjct: 598 attaaaaccagcaatcctgagattagccacagggaggcattcagtgctgctgcaaagaac 657 Query: 738 tgggc 742 ||||| Sbjct: 658 tgggc 662
>ref|NM_001059958.1| Oryza sativa (japonica cultivar-group) Os04g0536300 (Os04g0536300) mRNA, complete cds Length = 1300 Score = 77.8 bits (39), Expect = 8e-11 Identities = 117/143 (81%) Strand = Plus / Plus Query: 618 gagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagatacgaagg 677 |||||| ||||| | ||||| || || |||||| |||||||||| || ||||||| | | Sbjct: 644 gagaagcggcagagggttccctcggcatacaaccgattcatcaaagatgagatacaacgc 703 Query: 678 atcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgcaaagaac 737 ||||| |||| ||| || ||||| | ||||||||| || |||||| |||| || |||||| Sbjct: 704 atcaaggcaagcaatccggacatcacccacagggaggctttcagcgctgctgccaagaac 763 Query: 738 tgggcacattacccaaacatcca 760 ||||| |||| |||| ||||||| Sbjct: 764 tgggcccatttcccacacatcca 786 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 274 tctgctacgtccactgcaacttctgcaacaccgtactcgcggtg 317 |||||||||| ||||||||||||||| ||||| | ||||||||| Sbjct: 234 tctgctacgtgcactgcaacttctgcgacaccatcctcgcggtg 277
>gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024K17 map near S16403, complete sequence Length = 172238 Score = 77.8 bits (39), Expect = 8e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 662 ggaagagatacgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcag 721 ||||||||| || ||||| ||||||||||| || ||||| |||||||| ||||||||||| Sbjct: 35940 ggaagagatccggaggataaaagcaaacaatcctgacataagccacagagaagccttcag 35999 Query: 722 cactgccgcaaagaa 736 ||||| |||||||| Sbjct: 36000 tactgcagcaaagaa 36014 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 613 ctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaag 662 |||| |||||||||||||| |||||||| || || |||||||| |||||| Sbjct: 35734 ctccagagaagaggcagcgggttccttcagcttataacagatttatcaag 35783 Score = 50.1 bits (25), Expect = 0.017 Identities = 28/29 (96%) Strand = Plus / Plus Query: 276 tgctacgtccactgcaacttctgcaacac 304 |||||||| |||||||||||||||||||| Sbjct: 27529 tgctacgtgcactgcaacttctgcaacac 27557
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 77.8 bits (39), Expect = 8e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 662 ggaagagatacgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcag 721 ||||||||| || ||||| ||||||||||| || ||||| |||||||| ||||||||||| Sbjct: 25010812 ggaagagatccggaggataaaagcaaacaatcctgacataagccacagagaagccttcag 25010871 Query: 722 cactgccgcaaagaa 736 ||||| |||||||| Sbjct: 25010872 tactgcagcaaagaa 25010886 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 613 ctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaag 662 |||| |||||||||||||| |||||||| || || |||||||| |||||| Sbjct: 25010606 ctccagagaagaggcagcgggttccttcagcttataacagatttatcaag 25010655 Score = 50.1 bits (25), Expect = 0.017 Identities = 28/29 (96%) Strand = Plus / Plus Query: 276 tgctacgtccactgcaacttctgcaacac 304 |||||||| |||||||||||||||||||| Sbjct: 25002401 tgctacgtgcactgcaacttctgcaacac 25002429 Score = 42.1 bits (21), Expect = 4.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 276 tgctacgtccactgcaacttctgcaacaccgtactcgcggt 316 |||||||| | ||||| || |||||||||||| |||||||| Sbjct: 6008870 tgctacgtgcgctgcacctactgcaacaccgtgctcgcggt 6008910
>dbj|AB168113.1| Amborella trichopoda AmbF2 mRNA for filamentous flower like protein, partial cds Length = 689 Score = 77.8 bits (39), Expect = 8e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 612 cctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagata 671 |||||||||||||| || | ||||| || ||||||||| | || |||||||||||||| Sbjct: 343 cctccggagaagagacaaagagttccctcggcgtacaaccgctttatcaaggaagagatc 402 Query: 672 cgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgca 731 | | | |||||||| ||||| ||||| | |||||||||||| ||||||||||| || Sbjct: 403 caacgaatcaaagcgggaaacccggacatcacccacagggaagcgttcagcactgcggcc 462 Query: 732 aagaactgggc 742 ||||||||||| Sbjct: 463 aagaactgggc 473
>dbj|AK070205.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042I23, full insert sequence Length = 1301 Score = 77.8 bits (39), Expect = 8e-11 Identities = 117/143 (81%) Strand = Plus / Plus Query: 618 gagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagatacgaagg 677 |||||| ||||| | ||||| || || |||||| |||||||||| || ||||||| | | Sbjct: 645 gagaagcggcagagggttccctcggcatacaaccgattcatcaaagatgagatacaacgc 704 Query: 678 atcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgcaaagaac 737 ||||| |||| ||| || ||||| | ||||||||| || |||||| |||| || |||||| Sbjct: 705 atcaaggcaagcaatccggacatcacccacagggaggctttcagcgctgctgccaagaac 764 Query: 738 tgggcacattacccaaacatcca 760 ||||| |||| |||| ||||||| Sbjct: 765 tgggcccatttcccacacatcca 787 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 274 tctgctacgtccactgcaacttctgcaacaccgtactcgcggtg 317 |||||||||| ||||||||||||||| ||||| | ||||||||| Sbjct: 235 tctgctacgtgcactgcaacttctgcgacaccatcctcgcggtg 278
>emb|CT828684.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN084I04, full insert sequence Length = 1094 Score = 71.9 bits (36), Expect = 5e-09 Identities = 99/120 (82%) Strand = Plus / Plus Query: 618 gagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagatacgaagg 677 ||||| || ||||| || || ||||| |||||||||||||||||||| ||||||| ||| Sbjct: 447 gagaaaagacagcgtgtcccatctgcatacaacagattcatcaaggaggagatacagagg 506 Query: 678 atcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgcaaagaac 737 || ||| | | ||| || || |||||||||||||| || ||||| |||| ||||||||| Sbjct: 507 attaaaaccagcaatcctgagattagccacagggaggcattcagtgctgctgcaaagaac 566
>gb|AY173066.1| Chrysanthemum x morifolium YABBY transcription factor CDM51 (cdm51) mRNA, complete cds Length = 663 Score = 69.9 bits (35), Expect = 2e-08 Identities = 107/131 (81%) Strand = Plus / Plus Query: 636 ccttctgcgtacaacagattcatcaaggaagagatacgaaggatcaaagcaaacaacccc 695 |||||||| |||||||||||||||||||||||||| | | | ||||||||| ||||| Sbjct: 418 ccttctgcttacaacagattcatcaaggaagagatccaacgtatcaaagcaggaaaccct 477 Query: 696 gacattagccacagggaagccttcagcactgccgcaaagaactgggcacattacccaaac 755 || || || ||||| || |||||||| | || |||||||| ||||| |||| || || Sbjct: 478 gatatcagtcacagagaggccttcagtgcagctgcaaagaattgggcccattttcctcac 537 Query: 756 atccacttcgg 766 ||||||||||| Sbjct: 538 atccacttcgg 548
>gb|AY495968.1| Solanum tuberosum YABBY1 (YABBY1) mRNA, partial cds Length = 371 Score = 69.9 bits (35), Expect = 2e-08 Identities = 92/111 (82%) Strand = Plus / Plus Query: 612 cctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagata 671 ||||| |||||||| ||||| || |||||||| |||||| |||||||||||||||| || Sbjct: 241 cctcctgagaagagacagcgagtcccttctgcttacaaccgattcatcaaggaagaaatc 300 Query: 672 cgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagc 722 | | | || |||||| || || || ||||||||||| |||||||||||| Sbjct: 301 caacgcataaaagcagggaatcctgatattagccacagagaagccttcagc 351
>emb|AJ633046.1| Ipomoea nil partial mRNA for putative CRC transcription factor 2 (crc2 gene) Length = 350 Score = 69.9 bits (35), Expect = 2e-08 Identities = 89/107 (83%) Strand = Plus / Plus Query: 636 ccttctgcgtacaacagattcatcaaggaagagatacgaaggatcaaagcaaacaacccc 695 |||||||| |||||| ||||||||||||| ||||| | ||||| ||||| | ||| || Sbjct: 244 ccttctgcttacaaccgattcatcaaggaggagatccagaggataaaagctagcaatcca 303 Query: 696 gacattagccacagggaagccttcagcactgccgcaaagaactgggc 742 || ||||||||| ||||||| ||||| ||||| || ||||| ||||| Sbjct: 304 gatattagccaccgggaagctttcagtactgctgccaagaattgggc 350
>ref|NM_179750.2| Arabidopsis thaliana transcription factor (AT2G26580) mRNA, complete cds Length = 799 Score = 67.9 bits (34), Expect = 7e-08 Identities = 109/134 (81%) Strand = Plus / Plus Query: 612 cctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagata 671 |||||||||||| ||||||| || |||||||||||||| |||||| || || || || Sbjct: 382 cctccggagaagcggcagcgagtaccttctgcgtacaatcaattcataaaagaggaaatt 441 Query: 672 cgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgca 731 | ||||| || || || || || ||||| |||||||| ||||| ||||||||||| || Sbjct: 442 cagaggattaaggcgaataatccagacataagccacagagaagcattcagcactgctgcc 501 Query: 732 aagaactgggcaca 745 ||||| |||||||| Sbjct: 502 aagaattgggcaca 515
>ref|NM_179749.1| Arabidopsis thaliana transcription factor (AT2G26580) mRNA, complete cds Length = 760 Score = 67.9 bits (34), Expect = 7e-08 Identities = 109/134 (81%) Strand = Plus / Plus Query: 612 cctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagata 671 |||||||||||| ||||||| || |||||||||||||| |||||| || || || || Sbjct: 341 cctccggagaagcggcagcgagtaccttctgcgtacaatcaattcataaaagaggaaatt 400 Query: 672 cgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgca 731 | ||||| || || || || || ||||| |||||||| ||||| ||||||||||| || Sbjct: 401 cagaggattaaggcgaataatccagacataagccacagagaagcattcagcactgctgcc 460 Query: 732 aagaactgggcaca 745 ||||| |||||||| Sbjct: 461 aagaattgggcaca 474
>gb|BT003734.1| Arabidopsis thaliana At2g26580 mRNA, complete cds Length = 495 Score = 67.9 bits (34), Expect = 7e-08 Identities = 109/134 (81%) Strand = Plus / Plus Query: 612 cctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagata 671 |||||||||||| ||||||| || |||||||||||||| |||||| || || || || Sbjct: 301 cctccggagaagcggcagcgagtaccttctgcgtacaatcaattcataaaagaggaaatt 360 Query: 672 cgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgca 731 | ||||| || || || || || ||||| |||||||| ||||| ||||||||||| || Sbjct: 361 cagaggattaaggcgaataatccagacataagccacagagaagcattcagcactgctgcc 420 Query: 732 aagaactgggcaca 745 ||||| |||||||| Sbjct: 421 aagaattgggcaca 434
>dbj|AK119091.1| Arabidopsis thaliana At2g26580 mRNA for unknown protein, complete cds, clone: RAFL21-44-F19 Length = 760 Score = 67.9 bits (34), Expect = 7e-08 Identities = 109/134 (81%) Strand = Plus / Plus Query: 612 cctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagata 671 |||||||||||| ||||||| || |||||||||||||| |||||| || || || || Sbjct: 341 cctccggagaagcggcagcgagtaccttctgcgtacaatcaattcataaaagaggaaatt 400 Query: 672 cgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgca 731 | ||||| || || || || || ||||| |||||||| ||||| ||||||||||| || Sbjct: 401 cagaggattaaggcgaataatccagacataagccacagagaagcattcagcactgctgcc 460 Query: 732 aagaactgggcaca 745 ||||| |||||||| Sbjct: 461 aagaattgggcaca 474
>gb|AY313904.1| Zea mays yabby10 protein mRNA, complete cds Length = 1573 Score = 65.9 bits (33), Expect = 3e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 612 cctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaagga 664 ||||||||||||||||||||||| || || ||||||||| | ||||||||||| Sbjct: 1135 cctccggagaagaggcagcgcgtgccgtcggcgtacaaccgcttcatcaagga 1187
>gb|AY106366.1| Zea mays PCO147319 mRNA sequence Length = 511 Score = 65.9 bits (33), Expect = 3e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 612 cctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaagga 664 ||||||||||||||||||||||| || || ||||||||| | ||||||||||| Sbjct: 39 cctccggagaagaggcagcgcgtgccgtcggcgtacaaccgcttcatcaagga 91
>gb|AY330228.1| Triticum aestivum YABBY protein (YAB1) mRNA, complete cds Length = 1218 Score = 65.9 bits (33), Expect = 3e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 612 cctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaagga 664 ||||||||||||||||||||||| || || ||||||||| | ||||||||||| Sbjct: 733 cctccggagaagaggcagcgcgtgccgtcggcgtacaaccgcttcatcaagga 785
>dbj|AB168114.1| Nuphar japonica NjFIL mRNA for filamentous flower like protein, partial cds Length = 821 Score = 63.9 bits (32), Expect = 1e-06 Identities = 104/128 (81%) Strand = Plus / Plus Query: 642 gcgtacaacagattcatcaaggaagagatacgaaggatcaaagcaaacaaccccgacatt 701 ||||||||||| |||||||| || ||||| | | | |||||||| |||||||| || Sbjct: 403 gcgtacaacaggttcatcaaagacgagatccaacgaatcaaagcgggaaaccccgatatc 462 Query: 702 agccacagggaagccttcagcactgccgcaaagaactgggcacattacccaaacatccac 761 | |||||||||||| |||||||| || || ||||| |||||||| | |||| | |||||| Sbjct: 463 acccacagggaagcattcagcacggctgccaagaattgggcacacttcccacatatccac 522 Query: 762 ttcgggct 769 || ||||| Sbjct: 523 tttgggct 530 Score = 44.1 bits (22), Expect = 1.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 282 gtccactgcaacttctgcaacaccgtactcgcggtgag 319 ||||| ||||||||||| || ||||| ||||||||||| Sbjct: 55 gtccattgcaacttctgtaataccgtcctcgcggtgag 92
>gb|AY313902.1| Zea mays yabby15 protein mRNA, partial cds Length = 1206 Score = 61.9 bits (31), Expect = 4e-06 Identities = 124/155 (80%) Strand = Plus / Plus Query: 612 cctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagata 671 |||||||||||| ||||| | || || || || |||||| | ||||||||||| ||||| Sbjct: 463 cctccggagaagcggcagagagtcccgtcggcatacaaccggttcatcaaggacgagatc 522 Query: 672 cgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgca 731 | | ||||| || |||||| ||||| | |||| |||| || |||||| | |||||| Sbjct: 523 cagcgcatcaaggccggcaacccggacatcacccaccgggaggcgttcagcgcagccgca 582 Query: 732 aagaactgggcacattacccaaacatccacttcgg 766 ||||| ||||| |||| |||| ||||||||||||| Sbjct: 583 aagaattgggcccatttcccacacatccacttcgg 617
>gb|AY109537.1| Zea mays CL672_1 mRNA sequence Length = 2090 Score = 61.9 bits (31), Expect = 4e-06 Identities = 124/155 (80%) Strand = Plus / Plus Query: 612 cctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagata 671 |||||||||||| ||||| | || || || || |||||| | ||||||||||| ||||| Sbjct: 562 cctccggagaagcggcagagagtcccgtcggcatacaaccggttcatcaaggacgagatc 621 Query: 672 cgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgca 731 | | ||||| || |||||| ||||| | |||| |||| || |||||| | |||||| Sbjct: 622 cagcgcatcaaggccggcaacccggacatcacccaccgggaggcgttcagcgcagccgca 681 Query: 732 aagaactgggcacattacccaaacatccacttcgg 766 ||||| ||||| |||| |||| ||||||||||||| Sbjct: 682 aagaattgggcccatttcccacacatccacttcgg 716
>ref|NM_001071556.1| Oryza sativa (japonica cultivar-group) Os10g0508300 (Os10g0508300) mRNA, complete cds Length = 933 Score = 60.0 bits (30), Expect = 2e-05 Identities = 108/134 (80%) Strand = Plus / Plus Query: 612 cctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagata 671 |||||||||||||||||||| || || || ||||||||| | ||||||||||| || || Sbjct: 634 cctccggagaagaggcagcgtgtgccatcggcgtacaaccgcttcatcaaggacgaaatc 693 Query: 672 cgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgca 731 | | | ||||| || ||| |||||||| |||||||| ||||||||| | || || Sbjct: 694 caacgcatcaaggctggcaatcccgacatctcgcacagggaggccttcagcgcggctgcc 753 Query: 732 aagaactgggcaca 745 |||||||||||||| Sbjct: 754 aagaactgggcaca 767
>dbj|AB126655.1| Cabomba caroliniana CcYAB2 mRNA for YABBY5 like protein, partial cds Length = 717 Score = 60.0 bits (30), Expect = 2e-05 Identities = 78/94 (82%) Strand = Plus / Plus Query: 654 ttcatcaaggaagagatacgaaggatcaaagcaaacaaccccgacattagccacagggaa 713 ||||||||||||||||||| ||||||||| || | |||||||| || | |||||| || Sbjct: 314 ttcatcaaggaagagatacaaaggatcaaggccagtaaccccgagataaaccacagagag 373 Query: 714 gccttcagcactgccgcaaagaactgggcacatt 747 || || || ||||| ||||| |||||||| |||| Sbjct: 374 gcgtttagtactgcagcaaaaaactgggctcatt 407
>ref|NM_001054094.1| Oryza sativa (japonica cultivar-group) Os02g0643200 (Os02g0643200) mRNA, complete cds Length = 1598 Score = 58.0 bits (29), Expect = 7e-05 Identities = 119/149 (79%) Strand = Plus / Plus Query: 612 cctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagata 671 |||||||||||| | ||| | || || |||||||||||| | ||||||||||| ||||| Sbjct: 921 cctccggagaagcgtcagagagtcccatctgcgtacaaccggttcatcaaggatgagatc 980 Query: 672 cgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgca 731 | ||||||| || |||||| ||||| |||||| |||| || ||||| | |||||| Sbjct: 981 cagcggatcaaggccggcaacccggacatcagccaccgggaggcgttcagtgcagccgca 1040 Query: 732 aagaactgggcacattacccaaacatcca 760 ||||| ||||| |||| ||| ||||||| Sbjct: 1041 aagaattgggcccatttccctcacatcca 1069
>gb|AY313903.1| Zea mays yabby9 protein mRNA, complete cds Length = 1605 Score = 58.0 bits (29), Expect = 7e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 612 cctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaagga 664 ||||||||||||||||||||||| || || || |||||| | ||||||||||| Sbjct: 1176 cctccggagaagaggcagcgcgtgccgtcggcctacaaccgcttcatcaagga 1228
>dbj|AK106784.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-H10, full insert sequence Length = 1598 Score = 58.0 bits (29), Expect = 7e-05 Identities = 119/149 (79%) Strand = Plus / Plus Query: 612 cctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagata 671 |||||||||||| | ||| | || || |||||||||||| | ||||||||||| ||||| Sbjct: 921 cctccggagaagcgtcagagagtcccatctgcgtacaaccggttcatcaaggatgagatc 980 Query: 672 cgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgca 731 | ||||||| || |||||| ||||| |||||| |||| || ||||| | |||||| Sbjct: 981 cagcggatcaaggccggcaacccggacatcagccaccgggaggcgttcagtgcagccgca 1040 Query: 732 aagaactgggcacattacccaaacatcca 760 ||||| ||||| |||| ||| ||||||| Sbjct: 1041 aagaattgggcccatttccctcacatcca 1069
>gb|AY451398.1| Antirrhinum majus YABBY2-like transcription factor YAB2 mRNA, complete cds Length = 1329 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 279 tacgtccactgcaacttctgcaacaccgtactcgcggtgagtgt 322 ||||| ||||||||||||||||||||| | || ||||||||||| Sbjct: 273 tacgttcactgcaacttctgcaacaccattctagcggtgagtgt 316 Score = 42.1 bits (21), Expect = 4.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 699 attagccacagggaagccttcagcactgccgcaaagaactgggcacatt 747 ||||| ||||||||||| || ||||| || ||||| || |||||||||| Sbjct: 627 attagtcacagggaagcttttagcacagctgcaaaaaattgggcacatt 675
>gb|DQ108871.1| Arabidopsis thaliana clone 6413 mRNA sequence Length = 1167 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 609 cgccctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaagga 664 ||||| |||||||| || || || |||||||| || |||||||||||||||||||| Sbjct: 537 cgcccaccggagaaaagacaacgtgttccttcggcctacaacagattcatcaagga 592
>gb|BT004243.1| Arabidopsis thaliana clone RAFL15-27-O09 (R20923) At1g08465 mRNA, complete sequence Length = 1155 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 609 cgccctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaagga 664 ||||| |||||||| || || || |||||||| || |||||||||||||||||||| Sbjct: 507 cgcccaccggagaaaagacaacgtgttccttcggcctacaacagattcatcaagga 562
>emb|BX813526.1|CNS0AANC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB22ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1059 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 609 cgccctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaagga 664 ||||| |||||||| || || || |||||||| || |||||||||||||||||||| Sbjct: 492 cgcccaccggagaaaagacaacgtgttccttcggcctacaacagattcatcaagga 547
>gb|AF136539.1|AF136539 Arabidopsis thaliana YABBY2 (YABBY2) mRNA, complete cds Length = 926 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 609 cgccctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaagga 664 ||||| |||||||| || || || |||||||| || |||||||||||||||||||| Sbjct: 345 cgcccaccggagaaaagacaacgtgttccttcggcctacaacagattcatcaagga 400
>emb|AM111348.1| Plantago major partial mRNA for abaxial cell fate / YABBY (yab1 gene) Length = 588 Score = 54.0 bits (27), Expect = 0.001 Identities = 111/139 (79%) Strand = Plus / Plus Query: 609 cgccctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagag 668 ||||| |||||||| ||||| || ||||| || || || ||| |||| || ||||||||| Sbjct: 123 cgccccccggagaaaaggcaacgagttccatcagcatataaccgatttattaaggaagag 182 Query: 669 atacgaaggatcaaagcaaacaaccccgacattagccacagggaagccttcagcactgcc 728 || | ||||| || || | || || || ||||||||||||||||| |||||||| || Sbjct: 183 atccagaggataaaggctacaaatcctgaaattagccacagggaagctttcagcacagca 242 Query: 729 gcaaagaactgggcacatt 747 || || || |||||||||| Sbjct: 243 gctaaaaattgggcacatt 261
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Minus Query: 274 tctgctacgtccactgcaacttctgcaacaccgtactcgcggt 316 |||||||||| ||||||||||||||| ||||| | |||||||| Sbjct: 26773455 tctgctacgtgcactgcaacttctgcgacaccatcctcgcggt 26773413
>emb|AL662998.4|OSJN00196 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020O11, complete sequence Length = 113677 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 274 tctgctacgtccactgcaacttctgcaacaccgtactcgcggt 316 |||||||||| ||||||||||||||| ||||| | |||||||| Sbjct: 9740 tctgctacgtgcactgcaacttctgcgacaccatcctcgcggt 9782
>gb|AC090870.13| Oryza sativa chromosome 10 BAC OSJNBb0015K05 genomic sequence, complete sequence Length = 123292 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 613 ctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaag 662 ||||||||||||||||||| || || || ||||||||| | ||||||||| Sbjct: 40306 ctccggagaagaggcagcgtgtgccatcggcgtacaaccgcttcatcaag 40355
>gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 genomic sequence, complete sequence Length = 151991 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 613 ctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaag 662 ||||||||||||||||||| || || || ||||||||| | ||||||||| Sbjct: 123953 ctccggagaagaggcagcgtgtgccatcggcgtacaaccgcttcatcaag 124002
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Minus Query: 613 ctccggagaagaggcagcgcgttccttctgcgtacaacagattcatcaag 662 ||||||||||||||||||| || || || ||||||||| | ||||||||| Sbjct: 18954735 ctccggagaagaggcagcgtgtgccatcggcgtacaaccgcttcatcaag 18954686
>gb|AC171736.1| Solanum lycopersicum chromosome 11 clone C11HBa0323E19, complete sequence Length = 141216 Score = 52.0 bits (26), Expect = 0.004 Identities = 29/30 (96%) Strand = Plus / Minus Query: 633 gttccttctgcgtacaacagattcatcaag 662 |||||||||||||||||| ||||||||||| Sbjct: 93553 gttccttctgcgtacaaccgattcatcaag 93524
>gb|AY313901.1| Zea mays yabby14 protein mRNA, complete cds Length = 1267 Score = 50.1 bits (25), Expect = 0.017 Identities = 118/149 (79%) Strand = Plus / Plus Query: 618 gagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagatacgaagg 677 |||||| ||||| | |||||||| || |||||| | |||||||| || ||||| | | Sbjct: 663 gagaagcggcagagagttccttccgcatacaaccgtttcatcaaagatgagatccagcgc 722 Query: 678 atcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgcaaagaac 737 ||||| || | ||| |||||||| | ||||||||||| |||||| | || || ||||| Sbjct: 723 atcaaggccagcaatcccgacatcactcacagggaagctttcagcgcggctgccaagaat 782 Query: 738 tgggcacattacccaaacatccacttcgg 766 ||||| |||| |||| ||||||| ||||| Sbjct: 783 tgggcccatttcccacacatccatttcgg 811
>gb|AC002505.3| Arabidopsis thaliana chromosome 2 clone T9J22 map B68, complete sequence Length = 115851 Score = 50.1 bits (25), Expect = 0.017 Identities = 34/37 (91%) Strand = Plus / Minus Query: 613 ctccggagaagaggcagcgcgttccttctgcgtacaa 649 ||||||||||| ||||||| || |||||||||||||| Sbjct: 90446 ctccggagaagcggcagcgagtaccttctgcgtacaa 90410 Score = 42.1 bits (21), Expect = 4.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 696 gacattagccacagggaagccttcagcactgccgcaaagaa 736 ||||| |||||||| ||||| ||||||||||| || ||||| Sbjct: 90257 gacataagccacagagaagcattcagcactgctgccaagaa 90217
>dbj|AB126654.1| Amborella trichopoda AmbF1 mRNA for YABBY2 like protein, complete cds Length = 870 Score = 50.1 bits (25), Expect = 0.017 Identities = 100/125 (80%) Strand = Plus / Plus Query: 618 gagaagaggcagcgcgttccttctgcgtacaacagattcatcaaggaagagatacgaagg 677 ||||||||||| |||||||| || || |||||| | || || || || || || | |||| Sbjct: 414 gagaagaggcaacgcgttccatcagcttacaaccgctttataaaagaggaaatccaaagg 473 Query: 678 atcaaagcaaacaaccccgacattagccacagggaagccttcagcactgccgcaaagaac 737 ||||| || | || ||||| || | ||| ||||| |||||||||||||| |||||||| Sbjct: 474 atcaaggctaggaatcccgagataacccatagggaggccttcagcactgcagcaaagaat 533 Query: 738 tgggc 742 ||||| Sbjct: 534 tgggc 538
>gb|AY104291.1| Zea mays PCO142391 mRNA sequence Length = 1001 Score = 50.1 bits (25), Expect = 0.017 Identities = 37/41 (90%) Strand = Plus / Plus Query: 276 tgctacgtccactgcaacttctgcaacaccgtactcgcggt 316 |||||||||| ||||| || |||||||||||| |||||||| Sbjct: 163 tgctacgtccgctgcacctactgcaacaccgtgctcgcggt 203
>gb|AY854798.1| Capparis flexuosa CRABS CLAW mRNA, complete cds Length = 561 Score = 46.1 bits (23), Expect = 0.27 Identities = 29/31 (93%) Strand = Plus / Plus Query: 287 ctgcaacttctgcaacaccgtactcgcggtg 317 ||||||||||||||||||||| || |||||| Sbjct: 72 ctgcaacttctgcaacaccgttctggcggtg 102
>gb|AY525548.1| Homo sapiens cyclin-dependent kinase-like 1 (CDC2-related kinase) (CDKL1) gene, complete cds Length = 69779 Score = 46.1 bits (23), Expect = 0.27 Identities = 23/23 (100%) Strand = Plus / Minus Query: 435 gcccaggagagcagcctgggcaa 457 ||||||||||||||||||||||| Sbjct: 67176 gcccaggagagcagcctgggcaa 67154
>dbj|AK095070.1| Homo sapiens cDNA FLJ37751 fis, clone BRHIP2023292 Length = 2297 Score = 46.1 bits (23), Expect = 0.27 Identities = 23/23 (100%) Strand = Plus / Plus Query: 435 gcccaggagagcagcctgggcaa 457 ||||||||||||||||||||||| Sbjct: 1522 gcccaggagagcagcctgggcaa 1544
>dbj|AK093741.1| Homo sapiens cDNA FLJ36422 fis, clone THYMU2011295 Length = 2250 Score = 46.1 bits (23), Expect = 0.27 Identities = 23/23 (100%) Strand = Plus / Minus Query: 435 gcccaggagagcagcctgggcaa 457 ||||||||||||||||||||||| Sbjct: 1004 gcccaggagagcagcctgggcaa 982
>gb|BC043427.2| Homo sapiens cDNA clone IMAGE:5288849 Length = 2224 Score = 46.1 bits (23), Expect = 0.27 Identities = 23/23 (100%) Strand = Plus / Plus Query: 435 gcccaggagagcagcctgggcaa 457 ||||||||||||||||||||||| Sbjct: 1390 gcccaggagagcagcctgggcaa 1412
>emb|AL359397.3|CNS05TE2 Human chromosome 14 DNA sequence BAC R-247L20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 168193 Score = 46.1 bits (23), Expect = 0.27 Identities = 23/23 (100%) Strand = Plus / Plus Query: 435 gcccaggagagcagcctgggcaa 457 ||||||||||||||||||||||| Sbjct: 79891 gcccaggagagcagcctgggcaa 79913
>gb|AC113007.11| Mus musculus chromosome 3, clone RP23-349H13, complete sequence Length = 180852 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 acacacagagaaagatagagaa 86 |||||||||||||||||||||| Sbjct: 94996 acacacagagaaagatagagaa 94975
>gb|AF026212.1| Caenorhabditis elegans cosmid F52G3, complete sequence Length = 42696 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 4 ttcctccttcctctccgcccatacat 29 |||||||||||||| ||||||||||| Sbjct: 32749 ttcctccttcctcttcgcccatacat 32724
>gb|AC093004.2| Homo sapiens 3 BAC RP11-129J11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159134 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 956 taactaaagaagcaacagaaaa 977 |||||||||||||||||||||| Sbjct: 57554 taactaaagaagcaacagaaaa 57533
>ref|NM_078343.2| Caenorhabditis elegans F52G3.1 (F52G3.1) mRNA, complete cds Length = 3950 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 4 ttcctccttcctctccgcccatacat 29 |||||||||||||| ||||||||||| Sbjct: 1381 ttcctccttcctcttcgcccatacat 1356
>emb|AL627215.12| Mouse DNA sequence from clone RP23-292E3 on chromosome 11, complete sequence Length = 216106 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 956 taactaaagaagcaacagaaaa 977 |||||||||||||||||||||| Sbjct: 67388 taactaaagaagcaacagaaaa 67367
>gb|AC158627.6| Mus musculus 10 BAC RP23-451N6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 183225 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 60 tacatacacacagagaaagatagaga 85 |||||||||||||||| ||||||||| Sbjct: 165587 tacatacacacagagagagatagaga 165562
>dbj|AB092981.1| Nymphaea colorata NcINO mRNA for putative transcription factor, complete cds Length = 1023 Score = 44.1 bits (22), Expect = 1.1 Identities = 40/46 (86%) Strand = Plus / Plus Query: 702 agccacagggaagccttcagcactgccgcaaagaactgggcacatt 747 ||||||||||| || ||||||||||||| || || |||||||||| Sbjct: 470 agccacagggaggcactcagcactgccgctaaaaattgggcacatt 515
>gb|AC155832.2| Mus musculus 10 BAC RP24-147J7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 153257 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 60 tacatacacacagagaaagatagaga 85 |||||||||||||||| ||||||||| Sbjct: 12763 tacatacacacagagagagatagaga 12738
>gb|AC186354.3| Gallus gallus BAC clone CH261-129F7 from chromosome z, complete sequence Length = 243957 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 416 gctccctgctgctgcacaggcccag 440 ||||||||||||||| ||||||||| Sbjct: 205637 gctccctgctgctgcccaggcccag 205661
>gb|AC188586.3| Callithrix jacchus BAC clone CH259-4H12 from chromosome unknown, complete sequence Length = 251178 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 957 aactaaagaagcaacagaaaa 977 ||||||||||||||||||||| Sbjct: 97216 aactaaagaagcaacagaaaa 97236
>ref|XM_429189.2| PREDICTED: Gallus gallus similar to RIKEN cDNA E130308A19 (LOC431637), mRNA Length = 3198 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 416 gctccctgctgctgcacaggcccag 440 ||||||||||||||| ||||||||| Sbjct: 534 gctccctgctgctgcccaggcccag 558
>ref|NM_001055910.1| Oryza sativa (japonica cultivar-group) Os03g0215200 (Os03g0215200) mRNA, complete cds Length = 1001 Score = 42.1 bits (21), Expect = 4.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 276 tgctacgtccactgcaacttctgcaacaccgtactcgcggt 316 |||||||| | ||||| || |||||||||||| |||||||| Sbjct: 132 tgctacgtgcgctgcacctactgcaacaccgtgctcgcggt 172
>emb|CU104736.1| Human DNA sequence from clone XX-NCIH2171_5G15, complete sequence Length = 234457 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 gcccaggagagcagcctgggc 455 ||||||||||||||||||||| Sbjct: 115587 gcccaggagagcagcctgggc 115567
>gb|AC187118.2| Gallus gallus BAC clone CH261-30J12 from chromosome z, complete sequence Length = 224525 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 416 gctccctgctgctgcacaggcccag 440 ||||||||||||||| ||||||||| Sbjct: 48785 gctccctgctgctgcccaggcccag 48809
>ref|NM_116235.1| Arabidopsis thaliana YAB3; transcription factor (YAB3) mRNA, complete cds Length = 1200 Score = 42.1 bits (21), Expect = 4.2 Identities = 87/109 (79%) Strand = Plus / Plus Query: 639 tctgcgtacaacagattcatcaaggaagagatacgaaggatcaaagcaaacaaccccgac 698 ||||| |||||| |||||||||| || ||||| | | | || || ||| |||||| || Sbjct: 764 tctgcatacaaccgattcatcaaagaggagatccaacgtataaaggcaggcaaccctgat 823 Query: 699 attagccacagggaagccttcagcactgccgcaaagaactgggcacatt 747 || |||||||| ||||||||||| |||| || || |||||||| |||| Sbjct: 824 atcagccacagagaagccttcagtgctgctgccaaaaactgggctcatt 872
>gb|AY854805.1| Gossypium hirsutum isolate 2 CRABS CLAW mRNA, partial cds Length = 514 Score = 42.1 bits (21), Expect = 4.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 tgctacgtccactgcaacttctgcaacac 304 ||||| |||| |||||||||||||||||| Sbjct: 23 tgctatgtccgctgcaacttctgcaacac 51
>gb|AY854804.1| Gossypium hirsutum isolate 1 CRABS CLAW mRNA, partial cds Length = 502 Score = 42.1 bits (21), Expect = 4.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 tgctacgtccactgcaacttctgcaacac 304 ||||| |||| |||||||||||||||||| Sbjct: 23 tgctatgtccgctgcaacttctgcaacac 51
>gb|AC105163.12| Mus musculus chromosome 3, clone RP24-163F11, complete sequence Length = 167766 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 acatacacacagagaaagatagaga 85 ||||||||||||||||||| ||||| Sbjct: 132012 acatacacacagagaaagagagaga 131988
>gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, complete sequence Length = 190298 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 acatacacacagagaaagata 81 ||||||||||||||||||||| Sbjct: 60537 acatacacacagagaaagata 60557
>gb|AC122005.3| Mus musculus chromosome 5 clone RP24-340B11, complete sequence Length = 183264 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 acacacagagaaagatagaga 85 ||||||||||||||||||||| Sbjct: 89904 acacacagagaaagatagaga 89924
>gb|AC099707.14| Mus musculus chromosome 1, clone RP23-329C7, complete sequence Length = 204557 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 acatacacacagagaaagatagaga 85 ||||||||||||||||||| ||||| Sbjct: 162122 acatacacacagagaaagagagaga 162098
>gb|BC027785.1| Mus musculus cold shock domain protein A, mRNA (cDNA clone MGC:35850 IMAGE:5345031), complete cds Length = 1676 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 ctgcacaggcccaggagagcagcct 451 |||||||||| |||||||||||||| Sbjct: 1321 ctgcacaggcacaggagagcagcct 1345
>gb|AC147405.7| Medicago truncatula clone mth2-146n5, complete sequence Length = 147062 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 cactgcaacttctgcaacacc 305 ||||||||||||||||||||| Sbjct: 24518 cactgcaacttctgcaacacc 24538
>gb|AC164428.4| Mus musculus BAC clone RP24-150D18 from chromosome 1, complete sequence Length = 170692 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 acatacacacagagaaagatagaga 85 ||||||||||||||||||| ||||| Sbjct: 158850 acatacacacagagaaagagagaga 158826
>gb|AY451396.1| Antirrhinum majus YABBY-like transcription factor GRAMINIFOLIA (GRAM) mRNA, complete cds Length = 977 Score = 42.1 bits (21), Expect = 4.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 274 tctgctacgtccactgcaacttctgcaacaccgtactcgcggtgagtgt 322 |||| |||||||| |||||||| || |||| || |||||||||||||| Sbjct: 129 tctgttacgtccattgcaacttttgtgacactgtcctcgcggtgagtgt 177
>gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESRRG) gene, complete cds Length = 590284 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 acatacacacagagaaagata 81 ||||||||||||||||||||| Sbjct: 70523 acatacacacagagaaagata 70503
>gb|AC140210.2| Mus musculus BAC clone RP24-472L9 from chromosome 13, complete sequence Length = 147418 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 acatacacacagagaaagatagaga 85 ||||||||||||||| ||||||||| Sbjct: 31173 acatacacacagagacagatagaga 31149
>gb|AY494713.1| Oryza sativa (japonica cultivar-group) drooping leaf (DL) mRNA, complete cds Length = 688 Score = 42.1 bits (21), Expect = 4.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 276 tgctacgtccactgcaacttctgcaacaccgtactcgcggt 316 |||||||| | ||||| || |||||||||||| |||||||| Sbjct: 84 tgctacgtgcgctgcacctactgcaacaccgtgctcgcggt 124
>gb|AC131744.3| Mus musculus BAC clone RP23-50E10 from chromosome 3, complete sequence Length = 225416 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 acatacacacagagaaagatagaga 85 ||||||||||||||||||| ||||| Sbjct: 198296 acatacacacagagaaagagagaga 198320
>gb|AC129081.6| Mus musculus BAC clone RP24-274H24 from chromosome 3, complete sequence Length = 179064 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 acatacacacagagaaagatagaga 85 ||||||||||||||||||| ||||| Sbjct: 135080 acatacacacagagaaagagagaga 135056
>gb|AC124598.5| Mus musculus BAC clone RP23-22P3 from 13, complete sequence Length = 220624 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 acacacagagaaagatagaga 85 ||||||||||||||||||||| Sbjct: 150899 acacacagagaaagatagaga 150879
>gb|AC122191.4| Mus musculus BAC clone RP23-42J4 from 6, complete sequence Length = 250147 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 427 ctgcacaggcccaggagagcagcct 451 |||||||||| |||||||||||||| Sbjct: 179572 ctgcacaggcgcaggagagcagcct 179548
>gb|AC021654.25| Homo sapiens 3 BAC RP11-192K2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167942 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 tcctccttcctctccgcccat 25 ||||||||||||||||||||| Sbjct: 22346 tcctccttcctctccgcccat 22326
>dbj|AK003145.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1100001A17 product:cold shock domain protein A, full insert sequence Length = 1586 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 ctgcacaggcccaggagagcagcct 451 |||||||||| |||||||||||||| Sbjct: 1242 ctgcacaggcgcaggagagcagcct 1266
>dbj|AK076041.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610510O09 product:cold shock domain protein A, full insert sequence Length = 1590 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 ctgcacaggcccaggagagcagcct 451 |||||||||| |||||||||||||| Sbjct: 1457 ctgcacaggcgcaggagagcagcct 1481
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 4.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 618 gagaagaggcagcgcgttccttctgcgtacaacagattcatcaag 662 ||||| || ||||| || || ||||| |||||||||||||||||| Sbjct: 3257983 gagaaaagacagcgtgtcccatctgcatacaacagattcatcaag 3258027
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 gggcagcgaggcggcggcgcc 218 ||||||||||||||||||||| Sbjct: 18350551 gggcagcgaggcggcggcgcc 18350571
>gb|AC096634.2| Homo sapiens chromosome 1 clone RP11-66M7, complete sequence Length = 163926 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 acatacacacagagaaagata 81 ||||||||||||||||||||| Sbjct: 51099 acatacacacagagaaagata 51119
>emb|AL592424.13| Human DNA sequence from clone RP11-68I18 on chromosome 1 Contains the 3' end of a novel gene (MGC29891), a ribosomal protein S29 (RPS29) pseudogene, the SEMA6C gene for sema domain transmembrane domain (TM) and cytoplasmic domain (semaphorin) 6C, gene FLJ23467, a novel gene, the SCNM1 gene for sodium channel modifier 1, the TMOD4 gene for tropomodulin 4 (muscle), the TCFL1 gene for transcription factor-like 1, the PIP5K1A gene for phosphatidylinositol-4-phosphate 5-kinase type I alpha, the 5' end of the PSMD4 gene for proteasome (prosome, macropain) 26S subunit non-ATPase 4 and four CpG islands, complete sequence Length = 159148 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 957 aactaaagaagcaacagaaaa 977 ||||||||||||||||||||| Sbjct: 52698 aactaaagaagcaacagaaaa 52718
>emb|AL136146.10| Human DNA sequence from clone RP5-916O11 on chromosome 11p12-13, complete sequence Length = 106073 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 tacatacacacagagaaagat 80 ||||||||||||||||||||| Sbjct: 77116 tacatacacacagagaaagat 77096
>gb|AC026269.26| Homo sapiens chromosome 11, clone RP11-745E9, complete sequence Length = 173145 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 tacatacacacagagaaagat 80 ||||||||||||||||||||| Sbjct: 13438 tacatacacacagagaaagat 13418
>ref|NM_011733.2| Mus musculus cold shock domain protein A (Csda), mRNA Length = 1655 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 ctgcacaggcccaggagagcagcct 451 |||||||||| |||||||||||||| Sbjct: 1311 ctgcacaggcgcaggagagcagcct 1335
>ref|NM_139117.2| Mus musculus cold shock domain protein A (Csda), mRNA Length = 1862 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 ctgcacaggcccaggagagcagcct 451 |||||||||| |||||||||||||| Sbjct: 1518 ctgcacaggcgcaggagagcagcct 1542
>gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1193C08, complete sequence Length = 111961 Score = 42.1 bits (21), Expect = 4.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 276 tgctacgtccactgcaacttctgcaacaccgtactcgcggt 316 |||||||| | ||||| || |||||||||||| |||||||| Sbjct: 68192 tgctacgtgcgctgcacctactgcaacaccgtgctcgcggt 68232
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 agggaggggggcagcgaggcggcgg 214 |||| |||||||||||||||||||| Sbjct: 245563 agggtggggggcagcgaggcggcgg 245539
>gb|AY037186.1| Arabidopsis thaliana AT4g00180/F6N15_22 mRNA, complete cds Length = 1200 Score = 42.1 bits (21), Expect = 4.2 Identities = 87/109 (79%) Strand = Plus / Plus Query: 639 tctgcgtacaacagattcatcaaggaagagatacgaaggatcaaagcaaacaaccccgac 698 ||||| |||||| |||||||||| || ||||| | | | || || ||| |||||| || Sbjct: 764 tctgcatacaaccgattcatcaaagaggagatccaacgtataaaggcaggcaaccctgat 823 Query: 699 attagccacagggaagccttcagcactgccgcaaagaactgggcacatt 747 || |||||||| ||||||||||| |||| || || |||||||| |||| Sbjct: 824 atcagccacagagaagccttcagtgctgctgccaaaaactgggctcatt 872
>emb|AL833373.1|HSM804686 Homo sapiens mRNA; cDNA DKFZp667H0114 (from clone DKFZp667H0114) Length = 3116 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 957 aactaaagaagcaacagaaaa 977 ||||||||||||||||||||| Sbjct: 1946 aactaaagaagcaacagaaaa 1966
>gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090D11, complete sequence Length = 174865 Score = 42.1 bits (21), Expect = 4.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 276 tgctacgtccactgcaacttctgcaacaccgtactcgcggt 316 |||||||| | ||||| || |||||||||||| |||||||| Sbjct: 3133 tgctacgtgcgctgcacctactgcaacaccgtgctcgcggt 3173
>gb|AC114736.4| Homo sapiens BAC clone CTD-2037B7 from 4, complete sequence Length = 81665 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 acatacacacagagaaagatagaga 85 |||||||||||||||||||| |||| Sbjct: 72817 acatacacacagagaaagatggaga 72793
>gb|AC153559.4| Mus musculus 10 BAC RP23-86P1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 185708 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cacacagagaaagatagagaagcag 90 |||||||||||||| |||||||||| Sbjct: 101254 cacacagagaaagaaagagaagcag 101278
>gb|AF248547.1|AF248547 Mus musculus Y-box protein 3 short isoform mRNA, complete cds; alternatively spliced Length = 1507 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 ctgcacaggcccaggagagcagcct 451 |||||||||| |||||||||||||| Sbjct: 1133 ctgcacaggcacaggagagcagcct 1157
>gb|AF248546.1|AF248546 Mus musculus Y-box protein 3 long isoform mRNA, complete cds; alternatively spliced Length = 1714 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 ctgcacaggcccaggagagcagcct 451 |||||||||| |||||||||||||| Sbjct: 1340 ctgcacaggcacaggagagcagcct 1364
>gb|AC084657.1|CBRG46J11 Caenorhabditis briggsae cosmid G46J11, complete sequence Length = 36926 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 963 agaagcaacagaaaaaagaagaagt 987 ||||||||| ||||||||||||||| Sbjct: 29640 agaagcaactgaaaaaagaagaagt 29616
>dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0001A11 Length = 153252 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 gggcagcgaggcggcggcgcc 218 ||||||||||||||||||||| Sbjct: 13475 gggcagcgaggcggcggcgcc 13495
>dbj|AB106554.1| Oryza sativa (japonica cultivar-group) DROOPING LEAF gene for DL protein, complete cds Length = 8200 Score = 42.1 bits (21), Expect = 4.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 276 tgctacgtccactgcaacttctgcaacaccgtactcgcggt 316 |||||||| | ||||| || |||||||||||| |||||||| Sbjct: 632 tgctacgtgcgctgcacctactgcaacaccgtgctcgcggt 672
>dbj|AB106553.1| Oryza sativa (japonica cultivar-group) DROOPING LEAF mRNA for DL protein, complete cds Length = 1037 Score = 42.1 bits (21), Expect = 4.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 276 tgctacgtccactgcaacttctgcaacaccgtactcgcggt 316 |||||||| | ||||| || |||||||||||| |||||||| Sbjct: 132 tgctacgtgcgctgcacctactgcaacaccgtgctcgcggt 172
>gb|BT002662.1| Arabidopsis thaliana At4g00180/F6N15_22 gene, complete cds Length = 723 Score = 42.1 bits (21), Expect = 4.2 Identities = 87/109 (79%) Strand = Plus / Plus Query: 639 tctgcgtacaacagattcatcaaggaagagatacgaaggatcaaagcaaacaaccccgac 698 ||||| |||||| |||||||||| || ||||| | | | || || ||| |||||| || Sbjct: 472 tctgcatacaaccgattcatcaaagaggagatccaacgtataaaggcaggcaaccctgat 531 Query: 699 attagccacagggaagccttcagcactgccgcaaagaactgggcacatt 747 || |||||||| ||||||||||| |||| || || |||||||| |||| Sbjct: 532 atcagccacagagaagccttcagtgctgctgccaaaaactgggctcatt 580
>dbj|AB092980.1| Nymphaea alba NaINO mRNA for putative transcription factor, complete cds Length = 1019 Score = 42.1 bits (21), Expect = 4.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 697 acattagccacagggaagccttcagcactgccgcaaagaactgggcaca 745 |||| ||||||||||| || ||||||||||| || || || |||||||| Sbjct: 467 acatcagccacagggaggcattcagcactgctgctaaaaattgggcaca 515
>gb|AC004672.1|AC004672 Homo sapiens 12p13.3-0-2.7 BAC RP5-951N9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 85420 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 gcccaggagagcagcctgggc 455 ||||||||||||||||||||| Sbjct: 84905 gcccaggagagcagcctgggc 84885
>emb|BX248094.10| Zebrafish DNA sequence from clone CH211-202I23 in linkage group 15, complete sequence Length = 91040 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1044 atacaaacaagactggataaa 1064 ||||||||||||||||||||| Sbjct: 11002 atacaaacaagactggataaa 10982
>emb|BX826582.1|CNS0A44H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB43ZF04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1446 Score = 42.1 bits (21), Expect = 4.2 Identities = 87/109 (79%) Strand = Plus / Plus Query: 639 tctgcgtacaacagattcatcaaggaagagatacgaaggatcaaagcaaacaaccccgac 698 ||||| |||||| |||||||||| || ||||| | | | || || ||| |||||| || Sbjct: 1033 tctgcatacaaccgattcatcaaagaggagatccaacgtataaaggcaggcaaccctgat 1092 Query: 699 attagccacagggaagccttcagcactgccgcaaagaactgggcacatt 747 || |||||||| ||||||||||| |||| || || |||||||| |||| Sbjct: 1093 atcagccacagagaagccttcagtgctgctgccaaaaactgggctcatt 1141
>emb|BX826990.1|CNS0A2HM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB84ZC04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1212 Score = 42.1 bits (21), Expect = 4.2 Identities = 87/109 (79%) Strand = Plus / Plus Query: 639 tctgcgtacaacagattcatcaaggaagagatacgaaggatcaaagcaaacaaccccgac 698 ||||| |||||| |||||||||| || ||||| | | | || || ||| |||||| || Sbjct: 855 tctgcatacaaccgattcatcaaagaggagatccaacgtataaaggcaggcaaccctgat 914 Query: 699 attagccacagggaagccttcagcactgccgcaaagaactgggcacatt 747 || |||||||| ||||||||||| |||| || || |||||||| |||| Sbjct: 915 atcagccacagagaagccttcagtgctgctgccaaaaactgggctcatt 963
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 42.1 bits (21), Expect = 4.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 618 gagaagaggcagcgcgttccttctgcgtacaacagattcatcaag 662 ||||| || ||||| || || ||||| |||||||||||||||||| Sbjct: 67676 gagaaaagacagcgtgtcccatctgcatacaacagattcatcaag 67720
>dbj|AP006111.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT45P14, TM0196a, complete sequence Length = 89377 Score = 42.1 bits (21), Expect = 4.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 cactgcaacttctgcaacacc 305 ||||||||||||||||||||| Sbjct: 49332 cactgcaacttctgcaacacc 49352
>gb|AC109183.17| Mus musculus chromosome 15, clone RP24-86P1, complete sequence Length = 182733 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 acatacacacagagaaagatagaga 85 ||||||||||||||||||| ||||| Sbjct: 120306 acatacacacagagaaagagagaga 120330
>gb|AF246224.1|AF246224 Mus musculus testis RNA binding protein MSY4 mRNA, complete cds Length = 1678 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 ctgcacaggcccaggagagcagcct 451 |||||||||| |||||||||||||| Sbjct: 1360 ctgcacaggcgcaggagagcagcct 1384
>gb|AC154822.2| Mus musculus BAC clone RP24-537L18 from 13, complete sequence Length = 167628 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 acatacacacagagaaagatagaga 85 ||||||||||||||| ||||||||| Sbjct: 123447 acatacacacagagacagatagaga 123423
>gb|AF136540.1|AF136540 Arabidopsis thaliana YABBY3 (YABBY3) mRNA, complete cds Length = 932 Score = 42.1 bits (21), Expect = 4.2 Identities = 87/109 (79%) Strand = Plus / Plus Query: 639 tctgcgtacaacagattcatcaaggaagagatacgaaggatcaaagcaaacaaccccgac 698 ||||| |||||| |||||||||| || ||||| | | | || || ||| |||||| || Sbjct: 580 tctgcatacaaccgattcatcaaagaggagatccaacgtataaaggcaggcaaccctgat 639 Query: 699 attagccacagggaagccttcagcactgccgcaaagaactgggcacatt 747 || |||||||| ||||||||||| |||| || || |||||||| |||| Sbjct: 640 atcagccacagagaagccttcagtgctgctgccaaaaactgggctcatt 688
>gb|BC062377.1| Mus musculus cold shock domain protein A, mRNA (cDNA clone MGC:68100 IMAGE:6530404), complete cds Length = 1684 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 ctgcacaggcccaggagagcagcct 451 |||||||||| |||||||||||||| Sbjct: 1299 ctgcacaggcacaggagagcagcct 1323
>gb|BC048242.1| Mus musculus cold shock domain protein A, mRNA (cDNA clone MGC:54516 IMAGE:6493766), complete cds Length = 1864 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 ctgcacaggcccaggagagcagcct 451 |||||||||| |||||||||||||| Sbjct: 1506 ctgcacaggcgcaggagagcagcct 1530
>ref|NM_031979.2| Rattus norvegicus cold shock domain protein A (Csda), mRNA gb|BC105778.1| Rattus norvegicus cold shock domain protein A, mRNA (cDNA clone MGC:124554 IMAGE:7932542), complete cds Length = 1900 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 ctgcacaggcccaggagagcagcct 451 |||||||||| |||||||||||||| Sbjct: 1501 ctgcacaggcacaggagagcagcct 1525
>emb|AL929544.7| Zebrafish DNA sequence from clone CH211-227O19, complete sequence Length = 109753 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 acatacacacagagaaagatagaga 85 ||||||||||||||||||| ||||| Sbjct: 14182 acatacacacagagaaagagagaga 14158
>emb|AL669845.9| Mouse DNA sequence from clone RP23-43C21 on chromosome 11, complete sequence Length = 243954 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 acatacacacagagaaagatagaga 85 ||||||||||||||||||| ||||| Sbjct: 240276 acatacacacagagaaagaaagaga 240300
>emb|AL672174.8| Mouse DNA sequence from clone RP23-408K4 on chromosome X, complete sequence Length = 201642 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 acatacacacagagaaagatagaga 85 ||||||||||||||||||| ||||| Sbjct: 177803 acatacacacagagaaagagagaga 177779
>emb|AL671011.9| Mouse DNA sequence from clone RP23-95O23 on chromosome 4, complete sequence Length = 226950 Score = 42.1 bits (21), Expect = 4.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 53 tctgacctacatacacacagagaaagatagaga 85 ||||||||||| ||||||||||| ||| ||||| Sbjct: 76104 tctgacctacacacacacagagagagacagaga 76072
>emb|AL805958.8| Mouse DNA sequence from clone RP23-179F9 on chromosome 2, complete sequence Length = 198627 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 cacacagagaaagatagagaagcag 90 |||||||||||||||||||| |||| Sbjct: 94656 cacacagagaaagatagagaggcag 94632
>dbj|D14485.1|MUSDBPA Mouse mRNA for dbpA murine homologue, complete cds Length = 1647 Score = 42.1 bits (21), Expect = 4.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 ctgcacaggcccaggagagcagcct 451 |||||||||| |||||||||||||| Sbjct: 1297 ctgcacaggcgcaggagagcagcct 1321 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 175,472,512 Number of extensions: 10740915 Number of successful extensions: 238124 Number of sequences better than 10.0: 145 Number of HSP's gapped: 238116 Number of HSP's successfully gapped: 185 Length of query: 1098 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1075 Effective length of database: 18,503,978,556 Effective search space: 19891776947700 Effective search space used: 19891776947700 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
