ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf69j13 |
|---|---|
| Clone Library Name | barley_pub |
>P48236:YG3L_YEAST Uncharacterized membrane protein YGR149W - Saccharomyces cerevisiae| (Baker's yeast) Length = 432 Score = 113 bits (282), Expect = 2e-24 Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 2/280 (0%) Frame = +3 Query: 303 YLLGARPQDVPYVYCLFYVIFVPLRWIYYRYKKWHYYLLDFCYYANTFLLVMILFYPKDE 482 +L+G P+ Y + + + +P+R+ Y K HY+L DFCY+ N L+ I +P Sbjct: 128 FLMGRFPEWFHVYYTILFFVLMPIRFYTYYKTKNHYFLADFCYFVNMLCLLFIWIFPYSY 187 Query: 483 KLFMVCFSFAEGPLAWALIVWRCSLVFSSFDKLVSVLIHLLPGIVLFTIRWWNPQTFAAM 662 LF CF+F G L +A+I WR SLV S DK S IH++P V++ I P + Sbjct: 188 SLFQSCFAFTFGTLCFAVITWRNSLVIHSIDKTTSCFIHIIPPCVMYVIYHGLPLEYKIE 247 Query: 663 HPEGRAARVTWPYVEDKSYLWTWLFVVPLAAYTLWQLMYFLIVNVLRRQRLLRDPEVMTS 842 G A + K+ LWT L+ Y +WQ +Y + L++ ++ E MTS Sbjct: 248 RFPG--AIIQSELDIKKNILWTSLY------YLVWQSLYHYFI-TLKKSSKIKSGERMTS 298 Query: 843 YRELSKKAQKANNIWWRLSGLLGDKNRPLMYILLQALFTVATLAFTVPIFLSYRL-HGIF 1019 + L+ + N W + L ++Y L Q + + T+ I++ Y+L +F Sbjct: 299 FEYLT--THQFKNFW---AVKLRSPWPMIIYTLSQYFYQLFTM-LLCGIWIRYKLAAALF 352 Query: 1020 QVLKVCAATWNGGSFILEVMPRQVVQK-EKKRLEMKPIEQ 1136 + A+ NG ++ ++ + ++ ++ RLE++ ++Q Sbjct: 353 LTIVFLWASHNGATYYIDHYGKNFEKEVDRLRLEVENLQQ 392
>P55934:CNG_ICTPU Cyclic nucleotide-gated cation channel - Ictalurus punctatus| (Channel catfish) Length = 682 Score = 35.8 bits (81), Expect = 0.45 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 8/74 (10%) Frame = +3 Query: 345 CLFYVIFVPL-----RWIYYRYKKWHYYLLDFCYYANTFLLVMILFYP---KDEKLFMVC 500 C++Y I L W+Y K + +C+Y +T L I P KDE+ V Sbjct: 288 CIYYAISKALGLSSDTWVYSGQNKTLSFCYVYCFYWSTLTLTTIGEMPPPVKDEEYVFVV 347 Query: 501 FSFAEGPLAWALIV 542 F F G L +A IV Sbjct: 348 FDFLVGVLIFATIV 361
>P47307:Y061_MYCGE Uncharacterized protein MG061 - Mycoplasma genitalium| Length = 461 Score = 33.9 bits (76), Expect = 1.7 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 7/72 (9%) Frame = +3 Query: 342 YCLFYVIFVPLRWIYYRYKKWHYYLLDFCYYANTFLLVMILFYPKDEKL-------FMVC 500 Y L +V+F P Y K+W ++LL AN +L++I+ + + + Sbjct: 270 YALGFVVFSPFNKTIYDKKRWMHFLLT----ANIVVLLIIIMFAATLGIGSAAGFALISI 325 Query: 501 FSFAEGPLAWAL 536 FSF G AW+L Sbjct: 326 FSFIGGAFAWSL 337
>Q3T8J2:R1AB_BRV1 Replicase polyprotein 1ab - Breda virus 1 (BRV-1)| Length = 6733 Score = 33.9 bits (76), Expect = 1.7 Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 10/134 (7%) Frame = +3 Query: 333 PYVYCLFYVIFVPLRWIYYRYKKWHYYLLDFCYY-ANTFLLVMILFYPKDEKLFMVCFSF 509 PYV+ + IF + R Y++ + Y+ T+++ +LF LF+VC Sbjct: 2940 PYVFVVLVAIFTIVFLFLLRM-----YIVMYSYFKVFTYVVFKLLFVNTVMVLFVVCLPP 2994 Query: 510 AEGPLAWALIVWRC-SLVFSSFDKLVSVLIHLLPGIVLFT------IRWWNPQTFAAMH- 665 + + L +W C S+VF + ++S+ I ++LF + WW ++ +H Sbjct: 2995 LVPGVVFVLALWLCDSVVFLLYLAVLSLFILPWFYVMLFVLIVGGFVFWWMMKSSDVVHL 3054 Query: 666 -PEGRAARVTWPYV 704 P+G T+ V Sbjct: 3055 TPDGLTFNGTFEQV 3068
>Q5R9A1:S35B2_PONPY Adenosine 3'-phospho 5'-phosphosulfate transporter 1 - Pongo| pygmaeus (Orangutan) Length = 432 Score = 33.5 bits (75), Expect = 2.2 Identities = 19/63 (30%), Positives = 26/63 (41%) Frame = +3 Query: 630 RWWNPQTFAAMHPEGRAARVTWPYVEDKSYLWTWLFVVPLAAYTLWQLMYFLIVNVLRRQ 809 RWW AA G E + LW + FVV A Y + + +L+V RR+ Sbjct: 4 RWWAVVVLAAFPSLGAGGETPEAPPESWTQLWFFRFVVNAAGYASFMVPGYLLVQYFRRK 63 Query: 810 RLL 818 L Sbjct: 64 NYL 66
>Q8TB61:S35B2_HUMAN Adenosine 3'-phospho 5'-phosphosulfate transporter 1 - Homo sapiens| (Human) Length = 432 Score = 33.5 bits (75), Expect = 2.2 Identities = 19/63 (30%), Positives = 26/63 (41%) Frame = +3 Query: 630 RWWNPQTFAAMHPEGRAARVTWPYVEDKSYLWTWLFVVPLAAYTLWQLMYFLIVNVLRRQ 809 RWW AA G E + LW + FVV A Y + + +L+V RR+ Sbjct: 4 RWWAVVVLAAFPSLGAGGETPEAPPESWTQLWFFRFVVNAAGYASFMVPGYLLVQYFRRK 63 Query: 810 RLL 818 L Sbjct: 64 NYL 66
>Q37372:NU5M_ACACA NADH-ubiquinone oxidoreductase chain 5 - Acanthamoeba castellanii| (Amoeba) Length = 675 Score = 33.5 bits (75), Expect = 2.2 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 4/102 (3%) Frame = +3 Query: 330 VPYVYCLFYVIFVPLRWIYYRY-KKWHYYLLDFCYYANTFLLVMIL-FYPKDEKLFMVCF 503 V Y Y +F V R+ Y+ KKW++ LL Y N F+ ++ FY K+ Sbjct: 538 VIYDYTVFVVKNKFFRYAYFFLAKKWYFDLL----YNNIFVFNLLSSFYLLTFKIIDRGL 593 Query: 504 SFAEGPLAWALIVWRCSLVFSSFDK--LVSVLIHLLPGIVLF 623 GPL++ ++ + S++FSSF L + + +L G++ F Sbjct: 594 IELFGPLSFVRLINKSSIIFSSFQTGFLYNYIFVVLLGLMFF 635
>Q876L3:ARE1_SACBA Sterol O-acyltransferase 1 - Saccharomyces bayanus (Yeast)| (Saccharomyces uvarum) Length = 623 Score = 33.5 bits (75), Expect = 2.2 Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 19/125 (15%) Frame = +3 Query: 336 YVYCLFYVIFVPLRWIYYRYKKWHYYLLDFCYYANTFLLVMILFYPKDEKLFMVCFSFAE 515 +++C+F V+ + + + +W Y L FC T L+M+ + M C + + Sbjct: 390 FMFCMFPVLVYQINYPRTSHIRWRYVLEKFCAIMGTIFLMMVTAQIFMHPVAMRCIEYHD 449 Query: 516 GP---------LAWALIVWRCSLVFS-----SFDKLVSVLIHLLPGIVLFTIR-----WW 638 P W +++ FS +F + L++ + + F R WW Sbjct: 450 TPSFGGWVPAVKQWLFLLFEMIPGFSVLYMLTFYMIWDALLNCVAELTRFADRYFYGDWW 509 Query: 639 NPQTF 653 N +F Sbjct: 510 NCVSF 514
>P18458:R1AB_BEV Replicase polyprotein 1ab - Berne virus (BEV)| Length = 6857 Score = 32.3 bits (72), Expect = 5.0 Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 10/121 (8%) Frame = +3 Query: 333 PYVYCLFYVIFVPLRWIYYRYKKWHYYLLDFCYY-ANTFLLVMILFYPKDEKLFMVCFSF 509 PYV+ VIF + I R Y++ + Y+ T+++ +LF LF+VC Sbjct: 3060 PYVFVFIVVIFTVIFLILIRL-----YIVMYSYFKVFTYVVFKLLFVNIIMVLFVVCLPP 3114 Query: 510 AEGPLAWALIVWRC-SLVFSSFDKLVSVLIHLLPGI-VLF-------TIRWWNPQTFAAM 662 + + L +W C S++F + +S+ I LP VLF + WW ++ + Sbjct: 3115 LVPGVVFVLALWLCDSVMFLLYLAFLSLFI--LPWFYVLFFLFMVGGFVFWWMMRSADVV 3172 Query: 663 H 665 H Sbjct: 3173 H 3173
>P76180:YDGK_ECOLI Inner membrane protein ydgK - Escherichia coli| Length = 146 Score = 32.0 bits (71), Expect = 6.5 Identities = 40/164 (24%), Positives = 61/164 (37%), Gaps = 5/164 (3%) Frame = +3 Query: 516 GPLAWALIVWRCSLVFSSFDKLVSVLIHLLPGIVLFTIRWWNPQTFAAMHPEGRAARVTW 695 GPLAW L+ L+S + LL L+T +PQTF + + ++ W Sbjct: 15 GPLAWLLVA------------LLSTTLALL----LYTAALSSPQTFQTLGGQALTTQILW 58 Query: 696 PYVEDKSYLWTWLFVVPLAAYTLWQLMYFLIVNVLRRQRLLRDPEVMTSYRELSKKAQKA 875 +++ + L YTLW L + +R+R + K Sbjct: 59 GV--------SFITAIALWYYTLW-----LTIAFFKRRRCV----------------PKH 89 Query: 876 NNIWWRLSGLLGDKNRPLMYI-----LLQALFTVATLAFTVPIF 992 IW +S LL K + + Q LFT+ A VP F Sbjct: 90 YIIWLLISVLLAVKAFAFSPVEDGIAVRQLLFTLLATALIVPYF 133
>P40897:OPT1_YEAST Oligopeptide transporter 1 - Saccharomyces cerevisiae (Baker's| yeast) Length = 799 Score = 32.0 bits (71), Expect = 6.5 Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 3/112 (2%) Frame = +3 Query: 312 GARPQDVPYVYCLFYVIFVPLRWIYYRYKKW---HYYLLDFCYYANTFLLVMILFYPKDE 482 G P PY Y LF+ + L I R++ W + +++ A + V+I+F Sbjct: 701 GNIPPSTPYNYSLFFAMSFCLNLIRKRWRAWFNKYNFVMGAGVEAGVAISVVIIF----- 755 Query: 483 KLFMVCFSFAEGPLAWALIVWRCSLVFSSFDKLVSVLIHLLPGIVLFTIRWW 638 +C + G L+W W ++ ++D L G +WW Sbjct: 756 ----LCVQYPGGKLSW----WGNNVWKRTYDNDYKKFYTLKKGETFGYDKWW 799
>Q91QT2:R1AB_IBVBC Replicase polyprotein 1ab - Avian infectious bronchitis virus (strain| Beaudette CK) (IBV) Length = 6629 Score = 31.6 bits (70), Expect = 8.5 Identities = 31/134 (23%), Positives = 51/134 (38%) Frame = +3 Query: 417 LDFCYYANTFLLVMILFYPKDEKLFMVCFSFAEGPLAWALIVWRCSLVFSSFDKLVSVLI 596 L F YA LL+ +LF K M P +I+ C+ V ++ L+S Sbjct: 3121 LKFYVYAAVILLMAVLFISFTVKHVMAYMDTFLLPTLITVIIGVCAEVPFIYNTLISQ-- 3178 Query: 597 HLLPGIVLFTIRWWNPQTFAAMHPEGRAARVTWPYVEDKSYLWTWLFVVPLAAYTLWQLM 776 +V+F +W++P F M P W+F +PL YT ++ + Sbjct: 3179 -----VVIFLSQWYDPVVFDTMVP--------------------WMF-LPLVLYTAFKCV 3212 Query: 777 YFLIVNVLRRQRLL 818 +N L+ Sbjct: 3213 QGCYMNSFNTSLLM 3226
>P27920:R1AB_IBVB Replicase polyprotein 1ab - Avian infectious bronchitis virus (strain| Beaudette) (IBV) Length = 6629 Score = 31.6 bits (70), Expect = 8.5 Identities = 31/134 (23%), Positives = 51/134 (38%) Frame = +3 Query: 417 LDFCYYANTFLLVMILFYPKDEKLFMVCFSFAEGPLAWALIVWRCSLVFSSFDKLVSVLI 596 L F YA LL+ +LF K M P +I+ C+ V ++ L+S Sbjct: 3121 LKFYVYAAVILLMAVLFISFTVKHVMAYMDTFLLPTLITVIIGVCAEVPFIYNTLISQ-- 3178 Query: 597 HLLPGIVLFTIRWWNPQTFAAMHPEGRAARVTWPYVEDKSYLWTWLFVVPLAAYTLWQLM 776 +V+F +W++P F M P W+F +PL YT ++ + Sbjct: 3179 -----VVIFLSQWYDPVVFDTMVP--------------------WMF-LPLVLYTAFKCV 3212 Query: 777 YFLIVNVLRRQRLL 818 +N L+ Sbjct: 3213 QGCYMNSFNTSLLM 3226 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 255,077,263 Number of extensions: 5785946 Number of successful extensions: 16228 Number of sequences better than 10.0: 13 Number of HSP's gapped: 16218 Number of HSP's successfully gapped: 13 Length of query: 472 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 355 Effective length of database: 68,593,924 Effective search space: 24350843020 Effective search space used: 24350843020 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
