ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf66k08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC091561.4| Homo sapiens chromosome 8, clone RP11-388G22, com... 50 0.014
2gb|AC090796.13| Homo sapiens chromosome 8, clone RP11-246K15, co... 50 0.014
3gb|AC168270.1| Mus musculus BAC clone RP23-173C15 from chromosom... 42 3.3
4gb|AC125064.6| Mus musculus BAC clone RP23-430F7 from chromosome... 42 3.3
5gb|AC073657.5|AC073657 Homo sapiens chromosome 15 clone RP11-107... 42 3.3
6gb|AC131772.4| Mus musculus BAC clone RP24-300K9 from chromosome... 42 3.3
7gb|AC131698.4| Mus musculus BAC clone RP23-428E12 from 3, comple... 42 3.3

>gb|AC091561.4| Homo sapiens chromosome 8, clone RP11-388G22, complete sequence
          Length = 191037
 Score = 50.1 bits (25), Expect = 0.014
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 119    aaatgtggaatccaaaaaggtgatc 143
              |||||||||||||||||||||||||
Sbjct: 188556 aaatgtggaatccaaaaaggtgatc 188580



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>gb|AC090796.13| Homo sapiens chromosome 8, clone RP11-246K15, complete sequence
          Length = 168055

 Score = 50.1 bits (25), Expect = 0.014
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 119    aaatgtggaatccaaaaaggtgatc 143
              |||||||||||||||||||||||||
Sbjct: 108497 aaatgtggaatccaaaaaggtgatc 108521



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>gb|AC168270.1| Mus musculus BAC clone RP23-173C15 from chromosome 3, complete sequence
          Length = 216449

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 147    ttgaatgtattaagggagaat 167
              |||||||||||||||||||||
Sbjct: 209293 ttgaatgtattaagggagaat 209273



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>gb|AC125064.6| Mus musculus BAC clone RP23-430F7 from chromosome 14, complete sequence
          Length = 188477

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 371    tcctaattctctgcttcctgg 391
              |||||||||||||||||||||
Sbjct: 107835 tcctaattctctgcttcctgg 107855



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>gb|AC073657.5|AC073657 Homo sapiens chromosome 15 clone RP11-107F6 map 15q14, complete
             sequence
          Length = 164272

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 673   tactccatgtgaagatagtat 693
             |||||||||||||||||||||
Sbjct: 83578 tactccatgtgaagatagtat 83558



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>gb|AC131772.4| Mus musculus BAC clone RP24-300K9 from chromosome 5, complete sequence
          Length = 161015

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 447    tttcaaccagttgtgccttat 467
              |||||||||||||||||||||
Sbjct: 108527 tttcaaccagttgtgccttat 108547



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>gb|AC131698.4| Mus musculus BAC clone RP23-428E12 from 3, complete sequence
          Length = 191438

 Score = 42.1 bits (21), Expect = 3.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 147    ttgaatgtattaagggagaat 167
              |||||||||||||||||||||
Sbjct: 132669 ttgaatgtattaagggagaat 132649


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 174,843,579
Number of extensions: 9088867
Number of successful extensions: 193525
Number of sequences better than 10.0: 7
Number of HSP's gapped: 193525
Number of HSP's successfully gapped: 7
Length of query: 875
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 853
Effective length of database: 18,508,616,841
Effective search space: 15787850165373
Effective search space used: 15787850165373
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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