ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf66k07 |
|---|---|
| Clone Library Name | barley_pub |
>AK103296:Os04g0486400 | Length = 385 Score = 31.2 bits (69), Expect = 0.52 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 4/45 (8%) Frame = +2 Query: 98 GEQPQ*PAATVRLPD----DGGHGAGRRQRLAAPGGDKAARPENW 220 G PQ P + LP+ DGGH + R + GG R E W Sbjct: 5 GPSPQQPTPPLLLPESSGEDGGHDSSSRAAASGGGGGPKKRAETW 49
>AJ535489:Os04g0486400 | Length = 385 Score = 31.2 bits (69), Expect = 0.52 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 4/45 (8%) Frame = +2 Query: 98 GEQPQ*PAATVRLPD----DGGHGAGRRQRLAAPGGDKAARPENW 220 G PQ P + LP+ DGGH + R + GG R E W Sbjct: 5 GPSPQQPTPPLLLPESSGEDGGHDSSSRAAASGGGGGPKKRAETW 49
>Os02g0581900:Os02g0581900 | Length = 170 Score = 30.8 bits (68), Expect = 0.68 Identities = 19/62 (30%), Positives = 27/62 (43%) Frame = -2 Query: 204 AALSPPGAASRCRLPAPCPPSSGSLTVAAGHCGCSPCSSMRARALALAEASWSTRSIVVV 25 AALSPP A R PC P+S L SP + +L+ A+ +T + Sbjct: 90 AALSPPDAVLRLLASLPCAPNSFMLNTTLRALAFSPNPASALGFFSLSAATAATAAAAAA 149 Query: 24 RS 19 R+ Sbjct: 150 RT 151
>AK105144:Os11g0287000 | Length = 134 Score = 30.8 bits (68), Expect = 0.68 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 5/54 (9%) Frame = -2 Query: 213 SGRAALSPPGAASRCRLPAPCPPSSGS-----LTVAAGHCGCSPCSSMRARALA 67 +G +PP A+ P P PPSSGS +V+ G G S RA A A Sbjct: 44 TGAPLRAPPQPATPLNAPRPSPPSSGSGDGALPSVSGGDGGSGALPSRRAAAAA 97
>Os07g0669200:Os07g0669200 | Length = 752 Score = 30.0 bits (66), Expect = 1.2 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -2 Query: 186 GAASRCRLPAPCPPSSGSLTVAAGHCGCSPCSSMRARALA 67 GA + RLP P G LT+ G +P +R+RA++ Sbjct: 122 GATTFARLPLRDSPDGGDLTIGHFDAGVAPQEGLRSRAIS 161
>AK070124:Os07g0523400 | Length = 284 Score = 30.0 bits (66), Expect = 1.2 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Frame = -2 Query: 180 ASRCRLPAPCPPSS---GSLTVAAGHCGCSPCSSMRARALALAEASWSTRSIV 31 ASR PAP PPS+ G+ V A G +P + R + + A+W +++ Sbjct: 101 ASRVASPAPPPPSATADGARPVEAAPAGAAPEEAARRAKIGVYFATWWALNVI 153
>AK111295:Os11g0671100 | Length = 97 Score = 29.3 bits (64), Expect = 2.0 Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Frame = -2 Query: 228 RGNQFSGRAALSPPGAASRCRL-PAPCPPSSGSLTVAAGHCGCSPCSSMRARALALAEAS 52 RG+ + G SP G S R PA P SSGS A C+P S R R L + S Sbjct: 21 RGSWWRG---CSPGGTRSSTRCCPAASPASSGSSASTAS--ACTPPRSPRRRHLNIQRFS 75 Query: 51 WSTRSIVVVR 22 + S +V R Sbjct: 76 DGSESEIVKR 85
>AK108171:Os10g0141600 | Length = 203 Score = 29.3 bits (64), Expect = 2.0 Identities = 23/58 (39%), Positives = 28/58 (48%) Frame = -2 Query: 210 GRAALSPPGAASRCRLPAPCPPSSGSLTVAAGHCGCSPCSSMRARALALAEASWSTRS 37 GRA L+ P S CRL P SG AA PCS+ A A A ++WS+ S Sbjct: 126 GRALLASP--FSVCRLLMVWDPLSGEPCSAA-----PPCSATLASATAPPHSAWSSPS 176
>AY572960:Os10g0542100 | Length = 87 Score = 28.9 bits (63), Expect = 2.6 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = -2 Query: 210 GRAALSPPGAASRCRLPAPCPPSSGSLTVAAGHCGCSPC 94 G A P G RC A + HCGC+PC Sbjct: 8 GCAVPCPGGTGCRCASSARSGGGDHTTCSCGDHCGCNPC 46
>AK102405:Os10g0542100 | Length = 87 Score = 28.9 bits (63), Expect = 2.6 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = -2 Query: 210 GRAALSPPGAASRCRLPAPCPPSSGSLTVAAGHCGCSPC 94 G A P G RC A + HCGC+PC Sbjct: 8 GCAVPCPGGTGCRCASSARSGGGDHTTCSCGDHCGCNPC 46
>AK063504:Os10g0542100 | Length = 87 Score = 28.9 bits (63), Expect = 2.6 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = -2 Query: 210 GRAALSPPGAASRCRLPAPCPPSSGSLTVAAGHCGCSPC 94 G A P G RC A + HCGC+PC Sbjct: 8 GCAVPCPGGTGCRCASSARSGGGDHTTCSCGDHCGCNPC 46
>Os01g0858000:Os01g0858000 | Length = 1130 Score = 28.5 bits (62), Expect = 3.3 Identities = 19/53 (35%), Positives = 26/53 (49%) Frame = +3 Query: 54 KPQPEPELVHA*KSMESNHSDLQPPSGYPTTAGTVPVGGNGSPRREETRQRGR 212 + QPE E++H SM+S SD+ G +P GN S R+RGR Sbjct: 407 REQPEKEVIHIENSMQSGQSDI----GSMLPTYILPESGNKS-NSTGLRRRGR 454
>AK110793:Os07g0136400 | Length = 230 Score = 28.5 bits (62), Expect = 3.4 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = -2 Query: 195 SPPGAASRCRLPAPCPPSSGSLTVAAGHCGCSPCSS 88 SP AA +C LPA P ++G G G PC + Sbjct: 34 SPAAAAEKCSLPASPPTTAGVARRTYGTRGGWPCQA 69
>AK064769:Os02g0190200 | Length = 345 Score = 28.1 bits (61), Expect = 4.4 Identities = 13/59 (22%), Positives = 26/59 (44%) Frame = -3 Query: 548 TLHYGTSTTMMDGYTPQSKRKEERSGGSHAHMQDDSFTHIGVQPKYCYSTKQRDKMHHH 372 T H ++D ++ E+ +G H + D+ H +PK+ +R ++H H Sbjct: 251 TYHVDLGAELLDDVGATAEVVEDAAGDEQHHRRRDAVAHGAQKPKHHQRHVRRVRVHEH 309
>Os11g0593000:Os11g0593000 | Length = 535 Score = 28.1 bits (61), Expect = 4.4 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = -2 Query: 213 SGRAALSPPGAASRCRLPAPCPPSSGSLTVAAGHCGCSPC 94 S A+ S P A PAP PS+ S CGC PC Sbjct: 497 SASASSSAPAADPPATAPAPATPSALSKL-----CGCFPC 531
>Os06g0659800:Os06g0659800 | Length = 161 Score = 28.1 bits (61), Expect = 4.4 Identities = 20/51 (39%), Positives = 26/51 (50%) Frame = -2 Query: 204 AALSPPGAASRCRLPAPCPPSSGSLTVAAGHCGCSPCSSMRARALALAEAS 52 AA + GAA+ A P SGS TV G G +S+ A A A+ E+S Sbjct: 23 AAAAGSGAATARPDDAGVPEESGSATVRQGGGGGGGGASVSAAAAAVVESS 73
>AK112084:Os09g0237600 | Length = 358 Score = 27.7 bits (60), Expect = 5.7 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = -3 Query: 476 SGGSHAHMQDDSFTHIGVQPKYCYSTKQRDKMH 378 +G H H D ++H GV+P T+++D+ H Sbjct: 182 AGLKHMHSFDPPYSHNGVKPDNVLITQRKDQPH 214
>AK071689:Os09g0341600 | Length = 467 Score = 27.7 bits (60), Expect = 5.7 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +3 Query: 102 SNHSDLQPPSGYPTTAGTVPVGGNGSP 182 +N+S P + PTT G+ GNG P Sbjct: 11 TNNSSKAPATARPTTKGSTTASGNGRP 37
>Os11g0472100:Os11g0472100 | Length = 143 Score = 27.7 bits (60), Expect = 5.8 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = -2 Query: 204 AALSPPGAASRCRLPAPCPPSSGSLTVAAGHCGCSPCSSMRARALALAEA 55 AA + AA+ P+P PP+ G+ + A + +S R RA+A A Sbjct: 18 AAAAAAAAAAEEEEPSPTPPADGAAAITAAPAAAAAAASDR-RAVACTRA 66
>Os05g0327100:Os05g0327100 | Length = 1109 Score = 27.7 bits (60), Expect = 5.8 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +2 Query: 119 AATVRLPDDGGHGAGRRQRLAAPGG 193 AA + + GG GAGR++RL P G Sbjct: 657 AAQAKAAEQGGGGAGRQRRLRRPKG 681
>AY224430:Os07g0685000 | Length = 476 Score = 27.7 bits (60), Expect = 5.8 Identities = 12/40 (30%), Positives = 18/40 (45%) Frame = +2 Query: 116 PAATVRLPDDGGHGAGRRQRLAAPGGDKAARPENWFPRCM 235 P +T D+G G+ R + P GD A W P+ + Sbjct: 373 PTSTSTCSDNGSPVLGKHSRDSKPQGDDKAEKNLWIPKTL 412
>AK121905:Os11g0580000 | Length = 467 Score = 27.7 bits (60), Expect = 5.8 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -2 Query: 222 NQFSGRAALSPPGAASRCRLPAP 154 N FSG + SP GA SR + P+P Sbjct: 426 NSFSGFVSASPNGATSRDKTPSP 448
>AK121565:Os03g0275800 | Length = 92 Score = 27.7 bits (60), Expect = 5.8 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 4/33 (12%) Frame = -1 Query: 223 KPVFRPRCLVSS----RRGEPLPPTGTVPAVVG 137 +P F P +S RRG P PPT T PAVVG Sbjct: 45 RPDFPPHRRISQGPSRRRGSP-PPTPTPPAVVG 76
>AK119625:Os07g0685000 | Length = 476 Score = 27.7 bits (60), Expect = 5.8 Identities = 12/40 (30%), Positives = 18/40 (45%) Frame = +2 Query: 116 PAATVRLPDDGGHGAGRRQRLAAPGGDKAARPENWFPRCM 235 P +T D+G G+ R + P GD A W P+ + Sbjct: 373 PTSTSTCSDNGSPVLGKHSRDSKPQGDDKAEKNLWIPKTL 412
>AK119421:Os11g0580000 | Length = 622 Score = 27.7 bits (60), Expect = 5.8 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -2 Query: 222 NQFSGRAALSPPGAASRCRLPAP 154 N FSG + SP GA SR + P+P Sbjct: 426 NSFSGFVSASPNGATSRDKTPSP 448
>AK104095:Os07g0685000 | Length = 476 Score = 27.7 bits (60), Expect = 5.8 Identities = 12/40 (30%), Positives = 18/40 (45%) Frame = +2 Query: 116 PAATVRLPDDGGHGAGRRQRLAAPGGDKAARPENWFPRCM 235 P +T D+G G+ R + P GD A W P+ + Sbjct: 373 PTSTSTCSDNGSPVLGKHSRDSKPQGDDKAEKNLWIPKTL 412
>AK065816:Os07g0685000 | Length = 476 Score = 27.7 bits (60), Expect = 5.8 Identities = 12/40 (30%), Positives = 18/40 (45%) Frame = +2 Query: 116 PAATVRLPDDGGHGAGRRQRLAAPGGDKAARPENWFPRCM 235 P +T D+G G+ R + P GD A W P+ + Sbjct: 373 PTSTSTCSDNGSPVLGKHSRDSKPQGDDKAEKNLWIPKTL 412
>Os01g0232600:Os01g0232600 | Length = 355 Score = 24.3 bits (51), Expect(2) = 7.3 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%) Frame = -2 Query: 165 LPAPCPPSSGSLTVAAGHCGCS-PCSSM 85 LP PCPP G++ H + P SS+ Sbjct: 53 LPPPCPPPPGAIRFPLWHGAATIPASSV 80 Score = 21.6 bits (44), Expect(2) = 7.3 Identities = 8/16 (50%), Positives = 9/16 (56%) Frame = -2 Query: 192 PPGAASRCRLPAPCPP 145 PP S+ R P P PP Sbjct: 23 PPSPPSKTRRPPPPPP 38
>Os03g0716200:Os03g0716200 | Length = 872 Score = 27.3 bits (59), Expect = 7.5 Identities = 11/31 (35%), Positives = 15/31 (48%) Frame = -2 Query: 192 PPGAASRCRLPAPCPPSSGSLTVAAGHCGCS 100 PP A+ PCPPSS + T ++ S Sbjct: 200 PPAKAAAAEAERPCPPSSAATTSSSSSSSAS 230
>Os02g0219800:Os02g0219800 | Length = 124 Score = 27.3 bits (59), Expect = 7.5 Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 18/67 (26%) Frame = -2 Query: 171 CRLPAPCPPSSGSLTVAAG---------HCG---------CSPCSSMRARALALAEASWS 46 C+ PA C + S TV AG CG C C S RA LA A W Sbjct: 6 CKPPAVCGYNYVSPTVWAGPAARPAADADCGAWGNDPSQLCYECESCRAGLLAALRAQWH 65 Query: 45 TRSIVVV 25 ++ +V Sbjct: 66 RANVALV 72
>AK067954:Os10g0572500 | Length = 719 Score = 27.3 bits (59), Expect = 7.5 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Frame = -2 Query: 156 PCPPSSGSLTVAAGHCG--CSPCSSMRARALALAEAS 52 P P S ++ +G C C+PCSS R +AL +++ Sbjct: 59 PVPLDSPNVKTESGTCNVCCAPCSSCLHRNIALTDSN 95
>Os06g0490400:Os06g0490400 | Length = 729 Score = 26.9 bits (58), Expect = 9.8 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +2 Query: 143 DGGHGAGRRQRLAAPGGDKAAR 208 DGG GA RR RL GD + R Sbjct: 475 DGGDGAARRLRLGRGSGDSSRR 496
>Os04g0468100:Os04g0468100 | Length = 390 Score = 26.9 bits (58), Expect = 9.8 Identities = 20/54 (37%), Positives = 25/54 (46%) Frame = -2 Query: 192 PPGAASRCRLPAPCPPSSGSLTVAAGHCGCSPCSSMRARALALAEASWSTRSIV 31 PPG R RLPAP ++ L A SP SS R R A S R+++ Sbjct: 138 PPGRRRRQRLPAPVARAAAPLHTAP---PSSPSSSPRPRHSARKPPSDGGRALL 188
>Os03g0398400:Os03g0398400 | Length = 928 Score = 26.9 bits (58), Expect = 9.8 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 Query: 119 AATVRLPDDGGHGAGRRQRLAAPGGDKAA 205 AA + + GG GAGR +RL P G +A Sbjct: 80 AAQAKAAEQGGGGAGRWRRLRQPKGRTSA 108
>AK109628:Os04g0389800 | Length = 639 Score = 26.9 bits (58), Expect = 9.8 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 3/33 (9%) Frame = +2 Query: 131 RLPDDGGHGA---GRRQRLAAPGGDKAARPENW 220 R DDGG GA GRR+ A+PG A P+ W Sbjct: 600 RRGDDGGAGAVPAGRRR--ASPGARAADDPQQW 630
>AK064241:Os08g0404400 | Length = 205 Score = 26.9 bits (58), Expect = 9.8 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 8/63 (12%) Frame = -2 Query: 177 SRCRLPAPCPPSSGSLTVAAGHCGCSPC--------SSMRARALALAEASWSTRSIVVVR 22 +R RLP PP+S S A G S C +S R+RA E S R+ R Sbjct: 80 ARLRLPLRRPPTSTSTHAARSCAGASWCRTAATSSSASARSRAGLCGERSGRRRNFWAYR 139 Query: 21 SCD 13 + D Sbjct: 140 TYD 142
>AK062594:Os07g0187900 | Length = 253 Score = 26.9 bits (58), Expect = 9.8 Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 8/72 (11%) Frame = -2 Query: 228 RGNQFSGRAALSPPGAASRCRLPAPC----PPSSGSLTVAAGHCGCSP----CSSMRARA 73 RG S ++ SP A S R + PPSS + +A CSP CS+ Sbjct: 52 RGRWCSPASSSSPAPATSSSRSASRARSTPPPSSSASALARSGRSCSPSSPRCSASSTTP 111 Query: 72 LALAEASWSTRS 37 + A+W S Sbjct: 112 RSTTSAAWRAPS 123 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 17,787,287 Number of extensions: 434535 Number of successful extensions: 2062 Number of sequences better than 10.0: 37 Number of HSP's gapped: 2050 Number of HSP's successfully gapped: 38 Length of query: 194 Length of database: 15,399,855 Length adjustment: 95 Effective length of query: 99 Effective length of database: 11,595,960 Effective search space: 1148000040 Effective search space used: 1148000040 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
