ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf69i19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q04870:T2FA_XENLA Transcription initiation factor IIF subunit al... 43 0.003
2Q5EA53:T2FA_BOVIN Transcription initiation factor IIF subunit al... 41 0.012
3P35269:T2FA_HUMAN Transcription initiation factor IIF subunit al... 38 0.10
4Q6AY96:T2FA_RAT Transcription initiation factor IIF subunit alph... 37 0.13
5Q3THK3:T2FA_MOUSE Transcription initiation factor IIF subunit al... 37 0.13
6P40317:SOK1_YEAST Protein SOK1 - Saccharomyces cerevisiae (Baker... 34 1.5
7Q8NX66:ISDB_STAAW Iron-regulated surface determinant protein B p... 33 1.9
8Q6GA86:ISDB_STAAS Iron-regulated surface determinant protein B p... 33 1.9
9Q7A656:ISDB_STAAN Iron-regulated surface determinant protein B p... 33 1.9
10Q99UX5:ISDB_STAAM Iron-regulated surface determinant protein B p... 33 1.9
11Q5HGV5:ISDB_STAAC Iron-regulated surface determinant protein B p... 33 1.9
12Q2FZF0:ISDB_STAA8 Iron-regulated surface determinant protein B p... 33 1.9
13Q2FHV2:ISDB_STAA3 Iron-regulated surface determinant protein B p... 33 1.9
14P08640:MUC1_YEAST Mucin-like protein 1 precursor - Saccharomyces... 33 2.5
15P04929:HRPX_PLALO Histidine-rich glycoprotein precursor - Plasmo... 33 2.5
16Q2YX96:ISDB_STAAB Iron-regulated surface determinant protein B p... 33 3.3
17Q64762:FIB2_ADEG1 Fiber protein 2 - Avian adenovirus gal1 (strai... 33 3.3
18Q9UQ35:SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 -... 32 5.7
19Q24742:TRX_DROVI Protein trithorax - Drosophila virilis (Fruit fly) 31 9.6
20P46013:KI67_HUMAN Antigen KI-67 - Homo sapiens (Human) 31 9.6
21Q5M1B9:IF2_STRT1 Translation initiation factor IF-2 - Streptococ... 31 9.6
22Q6E2N3:TRI33_DANRE E3 ubiquitin-protein ligase TRIM33 - Danio re... 31 9.7

>Q04870:T2FA_XENLA Transcription initiation factor IIF subunit alpha - Xenopus laevis|
           (African clawed frog)
          Length = 524
 Score = 42.7 bits (99), Expect = 0.003
 Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
 Frame = +3

Query: 459 DTSPAKPTPSSGHARSTPPASKSKQKRXXXXXXXXXXXXXXXXXXXVESDTKTSSIKDET 638
           ++ P  P+P +G+  ST  A+ SK ++                        K  +    T
Sbjct: 389 NSRPGTPSPDTGNTSSTLRAAASKLEQSKRGTVSNTP---------AAKRLKMEAGPQNT 439

Query: 639 PASSKPTPKACASLKSANVSPVTEDEIRTVLLAVAPVTTQDLVSRF---KSRLRGPEDKN 809
              S P P++  S  S+    +TE+ +R  L    P+TT+DL+ +F   K+ L   +  N
Sbjct: 440 SGKSTPQPQSGKSTPSSGDIQLTEEAVRRYLTR-KPMTTKDLLKKFQTKKTGLSSEQTVN 498

Query: 810 AFAEILKKISKIQK 851
             A+ILK+++  +K
Sbjct: 499 VLAQILKRLNPDRK 512



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>Q5EA53:T2FA_BOVIN Transcription initiation factor IIF subunit alpha - Bos taurus|
           (Bovine)
          Length = 517

 Score = 40.8 bits (94), Expect = 0.012
 Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 3/134 (2%)
 Frame = +3

Query: 459 DTSPAKPTPSSGHARSTPPASKSKQKRXXXXXXXXXXXXXXXXXXXVESDTKTSSIKDET 638
           ++ P  P+  +G   ST  A+ SK ++                   +  DT   S+  + 
Sbjct: 384 NSRPGTPSTEAGSTSSTLRAAASKLEQGKRTSETPAAKR-------LRLDTGPQSLSGK- 435

Query: 639 PASSKPTPKACASLKSANVSPVTEDEIRTVLLAVAPVTTQDLVSRF---KSRLRGPEDKN 809
              S P P++  S  S+    VTED +R  L    P+TT+DL+ +F   K+ L   +  N
Sbjct: 436 ---STPQPQSGKSTPSSGDVQVTEDAVRRYLTR-KPMTTKDLLKKFQTKKTGLSSEQTVN 491

Query: 810 AFAEILKKISKIQK 851
             A+ILK+++  +K
Sbjct: 492 VLAQILKRLNPERK 505



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>P35269:T2FA_HUMAN Transcription initiation factor IIF subunit alpha - Homo sapiens|
           (Human)
          Length = 517

 Score = 37.7 bits (86), Expect = 0.10
 Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 6/137 (4%)
 Frame = +3

Query: 459 DTSPAKPTPSSGHARSTPPASKSKQKRXXXXXXXXXXXXXXXXXXXVESDTKTSSIKDET 638
           ++ P  P+   G   ST  A+ SK ++                   +  DT   S+  ++
Sbjct: 384 NSRPGTPSAEGGSTSSTLRAAASKLEQGKRVSEMPAAKR-------LRLDTGPQSLSGKS 436

Query: 639 ---PASSKPTPKACASLKSANVSPVTEDEIRTVLLAVAPVTTQDLVSRF---KSRLRGPE 800
              P S K TP       S +V  VTED +R  L    P+TT+DL+ +F   K+ L   +
Sbjct: 437 TPQPPSGKTTPN------SGDVQ-VTEDAVRRYLTR-KPMTTKDLLKKFQTKKTGLSSEQ 488

Query: 801 DKNAFAEILKKISKIQK 851
             N  A+ILK+++  +K
Sbjct: 489 TVNVLAQILKRLNPERK 505



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>Q6AY96:T2FA_RAT Transcription initiation factor IIF subunit alpha - Rattus|
           norvegicus (Rat)
          Length = 508

 Score = 37.4 bits (85), Expect = 0.13
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
 Frame = +3

Query: 633 ETPASSK------PTPKACASLKSANVSPVTEDEIRTVLLAVAPVTTQDLVSRF---KSR 785
           ETPA+ +      P   +  S  S+    VTED +R  L    P+TT+DL+ +F   K+ 
Sbjct: 416 ETPAAKRLRMDTGPQSLSGKSTPSSGDVQVTEDAVRRYLTR-KPMTTKDLLKKFQTKKTG 474

Query: 786 LRGPEDKNAFAEILKKISKIQKTNG 860
           L   +  N  A+ILK+++  +K  G
Sbjct: 475 LSSEQTVNVLAQILKRLNPERKMIG 499



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>Q3THK3:T2FA_MOUSE Transcription initiation factor IIF subunit alpha - Mus musculus|
           (Mouse)
          Length = 508

 Score = 37.4 bits (85), Expect = 0.13
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
 Frame = +3

Query: 633 ETPASSK------PTPKACASLKSANVSPVTEDEIRTVLLAVAPVTTQDLVSRF---KSR 785
           ETPA+ +      P   +  S  S+    VTED +R  L    P+TT+DL+ +F   K+ 
Sbjct: 416 ETPAAKRLRMDTGPQSLSGKSTPSSGDVQVTEDAVRRYLTR-KPMTTKDLLKKFQTKKTG 474

Query: 786 LRGPEDKNAFAEILKKISKIQKTNG 860
           L   +  N  A+ILK+++  +K  G
Sbjct: 475 LSSEQTVNVLAQILKRLNPERKMIG 499



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>P40317:SOK1_YEAST Protein SOK1 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 901

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +3

Query: 435 DQPKDEPVDTSPAKPTPSSGHARSTPPASKSKQKR 539
           DQP+     T+ + P PSS ++ S P A+ SKQ+R
Sbjct: 2   DQPRTHSGPTTASNPAPSSTNSSSAPSATNSKQER 36



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>Q8NX66:ISDB_STAAW Iron-regulated surface determinant protein B precursor -|
           Staphylococcus aureus (strain MW2)
          Length = 645

 Score = 33.5 bits (75), Expect = 1.9
 Identities = 30/114 (26%), Positives = 45/114 (39%)
 Frame = +3

Query: 426 KQTDQPKDEPVDTSPAKPTPSSGHARSTPPASKSKQKRXXXXXXXXXXXXXXXXXXXVES 605
           +Q +  K E    +P+KPTPS        P  K  QK+                    E+
Sbjct: 467 QQDNSAKKEATPATPSKPTPS--------PVEKESQKQDSQKDDNKQLPSVEK-----EN 513

Query: 606 DTKTSSIKDETPASSKPTPKACASLKSANVSPVTEDEIRTVLLAVAPVTTQDLV 767
           D  + S KD+TPA +KPT     S  +     V+  +        +  TT+D+V
Sbjct: 514 DASSESGKDKTPA-TKPTKGEVESSSTTPTKVVSTTQNVAKPTTASSKTTKDVV 566



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>Q6GA86:ISDB_STAAS Iron-regulated surface determinant protein B precursor -|
           Staphylococcus aureus (strain MSSA476)
          Length = 645

 Score = 33.5 bits (75), Expect = 1.9
 Identities = 30/114 (26%), Positives = 45/114 (39%)
 Frame = +3

Query: 426 KQTDQPKDEPVDTSPAKPTPSSGHARSTPPASKSKQKRXXXXXXXXXXXXXXXXXXXVES 605
           +Q +  K E    +P+KPTPS        P  K  QK+                    E+
Sbjct: 467 QQDNSAKKEATPATPSKPTPS--------PVEKESQKQDSQKDDNKQLPSVEK-----EN 513

Query: 606 DTKTSSIKDETPASSKPTPKACASLKSANVSPVTEDEIRTVLLAVAPVTTQDLV 767
           D  + S KD+TPA +KPT     S  +     V+  +        +  TT+D+V
Sbjct: 514 DASSESGKDKTPA-TKPTKGEVESSSTTPTKVVSTTQNVAKPTTASSKTTKDVV 566



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>Q7A656:ISDB_STAAN Iron-regulated surface determinant protein B precursor -|
           Staphylococcus aureus (strain N315)
          Length = 645

 Score = 33.5 bits (75), Expect = 1.9
 Identities = 30/114 (26%), Positives = 45/114 (39%)
 Frame = +3

Query: 426 KQTDQPKDEPVDTSPAKPTPSSGHARSTPPASKSKQKRXXXXXXXXXXXXXXXXXXXVES 605
           +Q +  K E    +P+KPTPS        P  K  QK+                    E+
Sbjct: 467 QQDNSAKKEATPATPSKPTPS--------PVEKESQKQDSQKDDNKQLPSVEK-----EN 513

Query: 606 DTKTSSIKDETPASSKPTPKACASLKSANVSPVTEDEIRTVLLAVAPVTTQDLV 767
           D  + S KD+TPA +KPT     S  +     V+  +        +  TT+D+V
Sbjct: 514 DASSESGKDKTPA-TKPTKGEVESSSTTPTKVVSTTQNVAKPTTASSKTTKDVV 566



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>Q99UX5:ISDB_STAAM Iron-regulated surface determinant protein B precursor -|
           Staphylococcus aureus (strain Mu50 / ATCC 700699)
          Length = 645

 Score = 33.5 bits (75), Expect = 1.9
 Identities = 30/114 (26%), Positives = 45/114 (39%)
 Frame = +3

Query: 426 KQTDQPKDEPVDTSPAKPTPSSGHARSTPPASKSKQKRXXXXXXXXXXXXXXXXXXXVES 605
           +Q +  K E    +P+KPTPS        P  K  QK+                    E+
Sbjct: 467 QQDNSAKKEATPATPSKPTPS--------PVEKESQKQDSQKDDNKQLPSVEK-----EN 513

Query: 606 DTKTSSIKDETPASSKPTPKACASLKSANVSPVTEDEIRTVLLAVAPVTTQDLV 767
           D  + S KD+TPA +KPT     S  +     V+  +        +  TT+D+V
Sbjct: 514 DASSESGKDKTPA-TKPTKGEVESSSTTPTKVVSTTQNVAKPTTASSKTTKDVV 566



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>Q5HGV5:ISDB_STAAC Iron-regulated surface determinant protein B precursor -|
           Staphylococcus aureus (strain COL)
          Length = 645

 Score = 33.5 bits (75), Expect = 1.9
 Identities = 30/114 (26%), Positives = 45/114 (39%)
 Frame = +3

Query: 426 KQTDQPKDEPVDTSPAKPTPSSGHARSTPPASKSKQKRXXXXXXXXXXXXXXXXXXXVES 605
           +Q +  K E    +P+KPTPS        P  K  QK+                    E+
Sbjct: 467 QQDNSAKKEATPATPSKPTPS--------PVEKESQKQDSQKDDNKQLPSVEK-----EN 513

Query: 606 DTKTSSIKDETPASSKPTPKACASLKSANVSPVTEDEIRTVLLAVAPVTTQDLV 767
           D  + S KD+TPA +KPT     S  +     V+  +        +  TT+D+V
Sbjct: 514 DASSESGKDKTPA-TKPTKGEVESSSTTPTKVVSTTQNVAKPTTASSKTTKDVV 566



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>Q2FZF0:ISDB_STAA8 Iron-regulated surface determinant protein B precursor -|
           Staphylococcus aureus (strain NCTC 8325)
          Length = 645

 Score = 33.5 bits (75), Expect = 1.9
 Identities = 30/114 (26%), Positives = 45/114 (39%)
 Frame = +3

Query: 426 KQTDQPKDEPVDTSPAKPTPSSGHARSTPPASKSKQKRXXXXXXXXXXXXXXXXXXXVES 605
           +Q +  K E    +P+KPTPS        P  K  QK+                    E+
Sbjct: 467 QQDNSAKKEATPATPSKPTPS--------PVEKESQKQDSQKDDNKQLPSVEK-----EN 513

Query: 606 DTKTSSIKDETPASSKPTPKACASLKSANVSPVTEDEIRTVLLAVAPVTTQDLV 767
           D  + S KD+TPA +KPT     S  +     V+  +        +  TT+D+V
Sbjct: 514 DASSESGKDKTPA-TKPTKGEVESSSTTPTKVVSTTQNVAKPTTASSKTTKDVV 566



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>Q2FHV2:ISDB_STAA3 Iron-regulated surface determinant protein B precursor -|
           Staphylococcus aureus (strain USA300)
          Length = 645

 Score = 33.5 bits (75), Expect = 1.9
 Identities = 30/114 (26%), Positives = 45/114 (39%)
 Frame = +3

Query: 426 KQTDQPKDEPVDTSPAKPTPSSGHARSTPPASKSKQKRXXXXXXXXXXXXXXXXXXXVES 605
           +Q +  K E    +P+KPTPS        P  K  QK+                    E+
Sbjct: 467 QQDNSAKKEATPATPSKPTPS--------PVEKESQKQDSQKDDNKQLPSVEK-----EN 513

Query: 606 DTKTSSIKDETPASSKPTPKACASLKSANVSPVTEDEIRTVLLAVAPVTTQDLV 767
           D  + S KD+TPA +KPT     S  +     V+  +        +  TT+D+V
Sbjct: 514 DASSESGKDKTPA-TKPTKGEVESSSTTPTKVVSTTQNVAKPTTASSKTTKDVV 566



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>P08640:MUC1_YEAST Mucin-like protein 1 precursor - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 1367

 Score = 33.1 bits (74), Expect = 2.5
 Identities = 31/123 (25%), Positives = 44/123 (35%), Gaps = 6/123 (4%)
 Frame = +3

Query: 432  TDQPKDEPVDTSPAKPTPSSGHARSTPPASKSKQKRXXXXXXXXXXXXXXXXXXXVESDT 611
            T +    PV T P+  T  S  A    P+S + +                       S T
Sbjct: 699  TTESSSAPVPT-PSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTT 757

Query: 612  KTSSIKDETPASSK------PTPKACASLKSANVSPVTEDEIRTVLLAVAPVTTQDLVSR 773
            ++SS    TP+SS       P P   +S   ++ +PV      T   +VAPV T    S 
Sbjct: 758  ESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSVAPVPTPSSSSN 817

Query: 774  FKS 782
              S
Sbjct: 818  ITS 820



 Score = 31.2 bits (69), Expect = 9.6
 Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
 Frame = +3

Query: 411 PVLAPKQ-TDQPKDEPVDTSPAKPTPSSGHARSTPPASKSKQKRXXXXXXXXXXXXXXXX 587
           PV  P   T +    PV T P+  T  S  A +  P+S + +                  
Sbjct: 580 PVPTPSSSTTESSSAPVPT-PSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPV 638

Query: 588 XXXVESDTKTSSIKDETPASSK------PTPKACASLKSANVSPVTEDEIRTVLLAVAPV 749
                S T++SS    TP+SS       P P   +S   ++ +PVT     T   + APV
Sbjct: 639 PTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSS---TTESSSAPV 695

Query: 750 TT 755
           T+
Sbjct: 696 TS 697



 Score = 31.2 bits (69), Expect = 9.6
 Identities = 34/144 (23%), Positives = 53/144 (36%), Gaps = 7/144 (4%)
 Frame = +3

Query: 411  PVLAPKQ-TDQPKDEPVDTSPAKPTPSSGHARSTPPASKSKQKRXXXXXXXXXXXXXXXX 587
            PV  P   T +    PV T P+  T  S  A    P+S + +                  
Sbjct: 706  PVPTPSSSTTESSSAPVPT-PSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPV 764

Query: 588  XXXVESDTKTSSIKDETPASSK------PTPKACASLKSANVSPVTEDEIRTVLLAVAPV 749
                 S T++SS    TP+SS       P P   +S   ++V+PV      + + + AP 
Sbjct: 765  PTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSVAPVPTPSSSSNITSSAPS 824

Query: 750  TTQDLVSRFKSRLRGPEDKNAFAE 821
            +T    S   S +  P   ++  E
Sbjct: 825  STPFSSSTESSSVPVPTPSSSTTE 848



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>P04929:HRPX_PLALO Histidine-rich glycoprotein precursor - Plasmodium lophurae|
          Length = 351

 Score = 33.1 bits (74), Expect = 2.5
 Identities = 17/68 (25%), Positives = 26/68 (38%)
 Frame = -1

Query: 207 YPQPHHHR*MFLHVPSHRLSQCHHPNQNLDLFHLPHRHPCPF*RAQAYLYERLPLLHSPH 28
           + + HHH     H P H     HHP ++ +  H  H H  P                 PH
Sbjct: 58  HEEHHHHHPEEHHEPHHEEHHHHHPEEHHEPHHEEHHHHHP----------------HPH 101

Query: 27  LYQNYYPP 4
            + +++PP
Sbjct: 102 HHHHHHPP 109



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>Q2YX96:ISDB_STAAB Iron-regulated surface determinant protein B precursor -|
           Staphylococcus aureus (strain bovine RF122)
          Length = 629

 Score = 32.7 bits (73), Expect = 3.3
 Identities = 29/114 (25%), Positives = 44/114 (38%)
 Frame = +3

Query: 426 KQTDQPKDEPVDTSPAKPTPSSGHARSTPPASKSKQKRXXXXXXXXXXXXXXXXXXXVES 605
           +Q +  K E    +P+KPT        TPP  K  QK+                    E+
Sbjct: 451 QQDNSAKKETTPATPSKPT--------TPPVEKESQKQDSQKDDNKQSPSVEK-----EN 497

Query: 606 DTKTSSIKDETPASSKPTPKACASLKSANVSPVTEDEIRTVLLAVAPVTTQDLV 767
           D  + S KD+TPA +KP      S  +     V+  +        +  TT+D+V
Sbjct: 498 DASSESGKDKTPA-TKPAKGEVESSSTTPTKVVSTTQNAAKPTTASSETTKDVV 550



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>Q64762:FIB2_ADEG1 Fiber protein 2 - Avian adenovirus gal1 (strain Phelps) (FAdV-1)|
           (Fowl adenovirus 1)
          Length = 410

 Score = 32.7 bits (73), Expect = 3.3
 Identities = 20/61 (32%), Positives = 32/61 (52%)
 Frame = -3

Query: 823 ISAKAFLSSGPRSLDLNLDTKSCVVTGATARRTVLISSSVTGDTLALFNEAQAFGVGFDE 644
           IS    L++    +DLN+D K+ VV G++ +  + +     G   AL + AQ  GV  DE
Sbjct: 101 ISTAGPLTTTANGIDLNIDPKTLVVDGSSGKNVLGVLLKGQG---ALQSSAQGIGVAVDE 157

Query: 643 A 641
           +
Sbjct: 158 S 158



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>Q9UQ35:SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 - Homo sapiens (Human)|
          Length = 2752

 Score = 32.0 bits (71), Expect = 5.7
 Identities = 24/101 (23%), Positives = 37/101 (36%)
 Frame = +3

Query: 423  PKQTDQPKDEPVDTSPAKPTPSSGHARSTPPASKSKQKRXXXXXXXXXXXXXXXXXXXVE 602
            P  T  PK+   +  P +PTP+    RS+  +S S                         
Sbjct: 2580 PSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S 2636

Query: 603  SDTKTSSIKDETPASSKPTPKACASLKSANVSPVTEDEIRT 725
            S + +SS    +P+ +KP P+A     S    P  E   R+
Sbjct: 2637 SSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRS 2677



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>Q24742:TRX_DROVI Protein trithorax - Drosophila virilis (Fruit fly)|
          Length = 3828

 Score = 31.2 bits (69), Expect = 9.6
 Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 2/113 (1%)
 Frame = +3

Query: 477  PTPSSGHARSTPPAS--KSKQKRXXXXXXXXXXXXXXXXXXXVESDTKTSSIKDETPASS 650
            P PS+  A   P  +  K+KQ +                    E++T  +  KDE PAS+
Sbjct: 942  PVPSTSEAAVAPGKTTRKAKQDKEKARELEAEKPLSPNAKKTTEANTPETQ-KDEQPAST 1000

Query: 651  KPTPKACASLKSANVSPVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKN 809
              T  A +S  S   S  T         A       D + R +  L+GP  K+
Sbjct: 1001 TTTVSAASSSTSHTSSAATNSSQLETTEAANASAVPDNLKRQRIDLKGPRVKH 1053



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>P46013:KI67_HUMAN Antigen KI-67 - Homo sapiens (Human)|
          Length = 3256

 Score = 31.2 bits (69), Expect = 9.6
 Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
 Frame = +3

Query: 612  KTSSIKDETPASSKPTPKACASLKSANVSPVTEDEIRTVLLAVAPVTTQDLVSRF---KS 782
            K + +++E  A  K TP A  ++ +   +   E +I T +    PV   DL+      K 
Sbjct: 1882 KKADVEEEFLAFRKLTPSAGKAMHTPKAAVGEEKDINTFV--GTPVEKLDLLGNLPGSKR 1939

Query: 783  RLRGPEDKNAFAEILKKISKIQKTNGHNYVVLREDK 890
            R + P++K    E L    ++ +T GH    + +DK
Sbjct: 1940 RPQTPKEKAKALEDLAGFKELFQTPGHTEESMTDDK 1975



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>Q5M1B9:IF2_STRT1 Translation initiation factor IF-2 - Streptococcus thermophilus|
           (strain CNRZ 1066)
          Length = 943

 Score = 31.2 bits (69), Expect = 9.6
 Identities = 24/75 (32%), Positives = 33/75 (44%)
 Frame = +3

Query: 597 VESDTKTSSIKDETPASSKPTPKACASLKSANVSPVTEDEIRTVLLAVAPVTTQDLVSRF 776
           + S  K  + KDE    SKP PKA  + K   V P   D+      A A  T++  V   
Sbjct: 46  ITSSLKAGTAKDE----SKPAPKATPTPKEEKVEPKV-DKASVAKSAPAKETSKAEVKEA 100

Query: 777 KSRLRGPEDKNAFAE 821
              L+ P+ +N  AE
Sbjct: 101 SVALKKPKSRNFKAE 115



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>Q6E2N3:TRI33_DANRE E3 ubiquitin-protein ligase TRIM33 - Danio rerio (Zebrafish)|
           (Brachydanio rerio)
          Length = 1163

 Score = 31.2 bits (69), Expect = 9.7
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +1

Query: 517 HRNPSKRGNQVVMMPNHLVVQLQRKQRWNLIQKHQVSKTRHRLHQNLHQ 663
           H +P K   Q+    N   ++LQ  Q+  + QKHQ     H+  Q+ HQ
Sbjct: 504 HNHPGKHSGQI----NLAQLRLQHMQQAAIAQKHQQQHQHHQQQQHQHQ 548


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 179,749,724
Number of extensions: 3547869
Number of successful extensions: 11417
Number of sequences better than 10.0: 22
Number of HSP's gapped: 11283
Number of HSP's successfully gapped: 24
Length of query: 425
Length of database: 100,686,439
Length adjustment: 116
Effective length of query: 309
Effective length of database: 68,868,219
Effective search space: 21280279671
Effective search space used: 21280279671
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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