ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf69i07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK058990:Os03g0824500 69 3e-12
2AK101427:Os01g0591300 27 6.5
3AK104444:Os04g0458300 27 8.4
4AK059553:Os04g0458300 27 8.4 
>AK058990:Os03g0824500 |
          Length = 50
 Score = 68.6 bits (166), Expect = 3e-12
 Identities = 32/37 (86%), Positives = 34/37 (91%)
 Frame = +1

Query: 73  MAVMDTAFKALTAGLGVATLYLAGSFSFNVYRGLAWH 183
           MAV D AFKALTAGLGVATLYLAG+FS NVYRGL+WH
Sbjct: 1   MAVADVAFKALTAGLGVATLYLAGTFSVNVYRGLSWH 37
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>AK101427:Os01g0591300 |
          Length = 507

 Score = 27.3 bits (59), Expect = 6.5
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 522 ANLRAYNARGKRHTENQYFVFNPSAPYAWYKV 427
           AN+ + + R      N YF F+P AP+  YK+
Sbjct: 445 ANMVSRSVRAGTVWVNCYFAFDPDAPFGGYKM 476
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>AK104444:Os04g0458300 |
          Length = 380

 Score = 26.9 bits (58), Expect = 8.4
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -2

Query: 128 VATPSPAVSALNAVSITAISAAGGCSSAE 42
           +A P+P +  L AV + A ++AGG  +AE
Sbjct: 1   MARPAPLLLLLAAVCLVAAASAGGADAAE 29
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>AK059553:Os04g0458300 |
          Length = 380

 Score = 26.9 bits (58), Expect = 8.4
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -2

Query: 128 VATPSPAVSALNAVSITAISAAGGCSSAE 42
           +A P+P +  L AV + A ++AGG  +AE
Sbjct: 1   MARPAPLLLLLAAVCLVAAASAGGADAAE 29


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 12,124,810
Number of extensions: 235286
Number of successful extensions: 671
Number of sequences better than 10.0: 4
Number of HSP's gapped: 668
Number of HSP's successfully gapped: 4
Length of query: 179
Length of database: 15,399,855
Length adjustment: 94
Effective length of query: 85
Effective length of database: 11,636,001
Effective search space: 989060085
Effective search space used: 989060085
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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