ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf69h11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q5EG55:RYBP_DANRE RING1 and YY1-binding protein - Danio rerio (Z... 28 7.4

>Q5EG55:RYBP_DANRE RING1 and YY1-binding protein - Danio rerio (Zebrafish)|
           (Brachydanio rerio)
          Length = 257
 Score = 28.5 bits (62), Expect = 7.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 189 VTLKPK*YFTKDKNSRPYSDLHVLPPSQNNCLK 91
           +T KP       K +RP SD+H  PPS+ N ++
Sbjct: 133 ITKKPN-----SKKNRPKSDIHQSPPSERNSIQ 160


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 57,994,234
Number of extensions: 1085479
Number of successful extensions: 1676
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1676
Number of HSP's successfully gapped: 1
Length of query: 123
Length of database: 100,686,439
Length adjustment: 90
Effective length of query: 33
Effective length of database: 75,999,889
Effective search space: 2507996337
Effective search space used: 2507996337
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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