| Clone Name | FLbaf66i23 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT830571.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI008B17, full insert sequence Length = 618 Score = 341 bits (172), Expect = 2e-90 Identities = 255/282 (90%), Gaps = 3/282 (1%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcg---agggcggcggcgcccacatcaacctcaa 185 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 103 cggggaggaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaa 162 Query: 186 ggtcaagggacaggatggcaatgaggtgttctttcgcatcaagagatcgacccagctgaa 245 |||||||||||||||||| || ||||| ||||| |||||||||||||| || |||||||| Sbjct: 163 ggtcaagggacaggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaa 222 Query: 246 gaagctgatgaatgcctactgtgaccgccagtctgtggatatgagtgccatcgcgttcct 305 |||||||||||| ||||| |||||||| |||||||||||||||| ||| || || ||||| Sbjct: 223 gaagctgatgaacgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcct 282 Query: 306 gtttgacggtcgcaggctccgtaccgagcagacccctgatgagctcgagatggaagatgg 365 ||||| ||||| ||||||||| ||||||||||||||| ||||||||||||||||| || Sbjct: 283 atttgatggtcgtaggctccgtggcgagcagacccctgacgagctcgagatggaagacgg 342 Query: 366 cgacgagatcgacgccatgcttcaccagaccggaggctgcct 407 |||||||||||||||||||| |||||||| ||||||||||| Sbjct: 343 ggacgagatcgacgccatgctccaccagactggaggctgcct 384 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 500 aaaagaacttgtgaggctctggccccatgccatagctgaaggacattag 548 |||||||||||||||||| ||| || |||||||||||||||||||||| Sbjct: 477 aaaagaacttgtgaggctttggtcctgtgccatagctgaaggacattag 525 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 588 ctgtcatgactcgtttatccatcccttaatat 619 |||| ||||||||||||||||| || |||||| Sbjct: 564 ctgttatgactcgtttatccataccctaatat 595
>ref|NM_001051742.1| Oryza sativa (japonica cultivar-group) Os01g0918300 (Os01g0918300) mRNA, complete cds Length = 642 Score = 341 bits (172), Expect = 2e-90 Identities = 255/282 (90%), Gaps = 3/282 (1%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcg---agggcggcggcgcccacatcaacctcaa 185 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 114 cggggaggaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaa 173 Query: 186 ggtcaagggacaggatggcaatgaggtgttctttcgcatcaagagatcgacccagctgaa 245 |||||||||||||||||| || ||||| ||||| |||||||||||||| || |||||||| Sbjct: 174 ggtcaagggacaggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaa 233 Query: 246 gaagctgatgaatgcctactgtgaccgccagtctgtggatatgagtgccatcgcgttcct 305 |||||||||||| ||||| |||||||| |||||||||||||||| ||| || || ||||| Sbjct: 234 gaagctgatgaacgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcct 293 Query: 306 gtttgacggtcgcaggctccgtaccgagcagacccctgatgagctcgagatggaagatgg 365 ||||| ||||| ||||||||| ||||||||||||||| ||||||||||||||||| || Sbjct: 294 atttgatggtcgtaggctccgtggcgagcagacccctgacgagctcgagatggaagacgg 353 Query: 366 cgacgagatcgacgccatgcttcaccagaccggaggctgcct 407 |||||||||||||||||||| |||||||| ||||||||||| Sbjct: 354 ggacgagatcgacgccatgctccaccagactggaggctgcct 395 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 500 aaaagaacttgtgaggctctggccccatgccatagctgaaggacattag 548 |||||||||||||||||| ||| || |||||||||||||||||||||| Sbjct: 488 aaaagaacttgtgaggctttggtcctgtgccatagctgaaggacattag 536 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 588 ctgtcatgactcgtttatccatcccttaatat 619 |||| ||||||||||||||||| || |||||| Sbjct: 574 ctgttatgactcgtttatccataccctaatat 605
>emb|X99608.1|OSSMT3 O.sativa mRNA for SMT3 protein Length = 303 Score = 341 bits (172), Expect = 2e-90 Identities = 255/282 (90%), Gaps = 3/282 (1%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcg---agggcggcggcgcccacatcaacctcaa 185 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 12 cggggaggaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaa 71 Query: 186 ggtcaagggacaggatggcaatgaggtgttctttcgcatcaagagatcgacccagctgaa 245 |||||||||||||||||| || ||||| ||||| |||||||||||||| || |||||||| Sbjct: 72 ggtcaagggacaggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaa 131 Query: 246 gaagctgatgaatgcctactgtgaccgccagtctgtggatatgagtgccatcgcgttcct 305 |||||||||||| ||||| |||||||| |||||||||||||||| ||| || || ||||| Sbjct: 132 gaagctgatgaacgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcct 191 Query: 306 gtttgacggtcgcaggctccgtaccgagcagacccctgatgagctcgagatggaagatgg 365 ||||| ||||| ||||||||| ||||||||||||||| ||||||||||||||||| || Sbjct: 192 atttgatggtcgtaggctccgtggcgagcagacccctgacgagctcgagatggaagacgg 251 Query: 366 cgacgagatcgacgccatgcttcaccagaccggaggctgcct 407 |||||||||||||||||||| |||||||| ||||||||||| Sbjct: 252 ggacgagatcgacgccatgctccaccagactggaggctgcct 293
>dbj|AK058869.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-C03, full insert sequence Length = 642 Score = 341 bits (172), Expect = 2e-90 Identities = 255/282 (90%), Gaps = 3/282 (1%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcg---agggcggcggcgcccacatcaacctcaa 185 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 114 cggggaggaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaa 173 Query: 186 ggtcaagggacaggatggcaatgaggtgttctttcgcatcaagagatcgacccagctgaa 245 |||||||||||||||||| || ||||| ||||| |||||||||||||| || |||||||| Sbjct: 174 ggtcaagggacaggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaa 233 Query: 246 gaagctgatgaatgcctactgtgaccgccagtctgtggatatgagtgccatcgcgttcct 305 |||||||||||| ||||| |||||||| |||||||||||||||| ||| || || ||||| Sbjct: 234 gaagctgatgaacgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcct 293 Query: 306 gtttgacggtcgcaggctccgtaccgagcagacccctgatgagctcgagatggaagatgg 365 ||||| ||||| ||||||||| ||||||||||||||| ||||||||||||||||| || Sbjct: 294 atttgatggtcgtaggctccgtggcgagcagacccctgacgagctcgagatggaagacgg 353 Query: 366 cgacgagatcgacgccatgcttcaccagaccggaggctgcct 407 |||||||||||||||||||| |||||||| ||||||||||| Sbjct: 354 ggacgagatcgacgccatgctccaccagactggaggctgcct 395 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 500 aaaagaacttgtgaggctctggccccatgccatagctgaaggacattag 548 |||||||||||||||||| ||| || |||||||||||||||||||||| Sbjct: 488 aaaagaacttgtgaggctttggtcctgtgccatagctgaaggacattag 536 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 588 ctgtcatgactcgtttatccatcccttaatat 619 |||| ||||||||||||||||| || |||||| Sbjct: 574 ctgttatgactcgtttatccataccctaatat 605
>dbj|AB016030.1| Oryza sativa (japonica cultivar-group) SUMO-1 mRNA for ubiquitin-related protein, complete cds Length = 569 Score = 341 bits (172), Expect = 2e-90 Identities = 255/282 (90%), Gaps = 3/282 (1%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcg---agggcggcggcgcccacatcaacctcaa 185 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 91 cggggaggaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaa 150 Query: 186 ggtcaagggacaggatggcaatgaggtgttctttcgcatcaagagatcgacccagctgaa 245 |||||||||||||||||| || ||||| ||||| |||||||||||||| || |||||||| Sbjct: 151 ggtcaagggacaggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaa 210 Query: 246 gaagctgatgaatgcctactgtgaccgccagtctgtggatatgagtgccatcgcgttcct 305 |||||||||||| ||||| |||||||| |||||||||||||||| ||| || || ||||| Sbjct: 211 gaagctgatgaacgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcct 270 Query: 306 gtttgacggtcgcaggctccgtaccgagcagacccctgatgagctcgagatggaagatgg 365 ||||| ||||| ||||||||| ||||||||||||||| ||||||||||||||||| || Sbjct: 271 atttgatggtcgtaggctccgtggcgagcagacccctgacgagctcgagatggaagacgg 330 Query: 366 cgacgagatcgacgccatgcttcaccagaccggaggctgcct 407 |||||||||||||||||||| |||||||| ||||||||||| Sbjct: 331 ggacgagatcgacgccatgctccaccagactggaggctgcct 372 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 500 aaaagaacttgtgaggctctggccccatgccatagctgaaggacattag 548 |||||||||||||||||| ||| || |||||||||||||||||||||| Sbjct: 465 aaaagaacttgtgaggctttggtcctgtgccatagctgaaggacattag 513
>gb|DQ244252.1| Zea mays clone 3895 mRNA sequence Length = 726 Score = 325 bits (164), Expect = 1e-85 Identities = 221/240 (92%) Strand = Plus / Plus Query: 163 ggcggcgcccacatcaacctcaaggtcaagggacaggatggcaatgaggtgttctttcgc 222 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 59 ggcggcgcccacatcaaccttaaggtcaagggacaggatggcaatgaggtgttctttcgc 118 Query: 223 atcaagagatcgacccagctgaagaagctgatgaatgcctactgtgaccgccagtctgtg 282 || ||||| || ||||||||||||||||||||||| || || |||||||||||||||||| Sbjct: 119 ataaagaggtccacccagctgaagaagctgatgaacgcttattgtgaccgccagtctgtg 178 Query: 283 gatatgagtgccatcgcgttcctgtttgacggtcgcaggctccgtaccgagcagacccct 342 || |||| |||||| |||||||||||||| || |||||||| || ||||||||||||| Sbjct: 179 gacatgaatgccattgcgttcctgtttgatggccgcaggcttcgcggcgagcagacccct 238 Query: 343 gatgagctcgagatggaagatggcgacgagatcgacgccatgcttcaccagaccggaggc 402 |||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 239 gatgagctggagatggaggacggcgacgagatcgacgccatgcttcaccagaccggaggc 298 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 577 ggtactttggcctgtcatgactcgtttatccatccct 613 ||||||||| ||||||| ||||||||||| |||||| Sbjct: 453 ggtactttgttctgtcatcactcgtttatctatccct 489
>gb|AY103962.1| Zea mays PCO135487 mRNA sequence Length = 781 Score = 317 bits (160), Expect = 3e-83 Identities = 220/240 (91%) Strand = Plus / Plus Query: 163 ggcggcgcccacatcaacctcaaggtcaagggacaggatggcaatgaggtgttctttcgc 222 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 106 ggcggcgcccacatcaaccttaaggtcaagggacaggatggcaatgaggtgttctttcgc 165 Query: 223 atcaagagatcgacccagctgaagaagctgatgaatgcctactgtgaccgccagtctgtg 282 || ||||| || ||||||||||||||||||||||| ||||| || ||||||||||||||| Sbjct: 166 ataaagaggtccacccagctgaagaagctgatgaacgcctattgcgaccgccagtctgtg 225 Query: 283 gatatgagtgccatcgcgttcctgtttgacggtcgcaggctccgtaccgagcagacccct 342 || |||| |||||| || ||||||||||| || |||||||| || ||||||||||||| Sbjct: 226 gacatgaatgccattgcattcctgtttgatggccgcaggcttcgcggcgagcagacccct 285 Query: 343 gatgagctcgagatggaagatggcgacgagatcgacgccatgcttcaccagaccggaggc 402 |||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 286 gatgagctggagatggaggacggcgacgagatcgacgccatgcttcaccagaccggaggc 345 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 577 ggtactttggcctgtcatgactcgtttatccatccct 613 ||||||||| ||||||| ||||||||||| |||||| Sbjct: 514 ggtactttgttctgtcatcactcgtttatctatccct 550
>ref|NM_001051741.1| Oryza sativa (japonica cultivar-group) Os01g0918200 (Os01g0918200) mRNA, complete cds Length = 627 Score = 299 bits (151), Expect = 6e-78 Identities = 252/285 (88%), Gaps = 3/285 (1%) Strand = Plus / Plus Query: 114 gatgtcgacgcccggcggggaggaggacaagaagccggcgggcg---agggcggcggcgc 170 ||||||| |||||| |||||||| || |||||||||||||| | ||||||||||||| Sbjct: 97 gatgtcgtcgcccgcgggggaggatgagaagaagccggcggggggagagggcggcggcgc 156 Query: 171 ccacatcaacctcaaggtcaagggacaggatggcaatgaggtgttctttcgcatcaagag 230 |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 157 ccacatcaacctcaaggtcaagggacaggatggcaacgaggtgttctttcgtatcaagag 216 Query: 231 atcgacccagctgaagaagctgatgaatgcctactgtgaccgccagtctgtggatatgag 290 ||| ||||| ||||||||||||||||| ||||||||||| |||||||| |||||||| | Sbjct: 217 atcaacccaactgaagaagctgatgaacgcctactgtgatcgccagtccgtggatatcaa 276 Query: 291 tgccatcgcgttcctgtttgacggtcgcaggctccgtaccgagcagacccctgatgagct 350 | || || ||||||||||| ||||| |||||| | | |||||||||||||| |||| Sbjct: 277 atctattgccttcctgtttgatggtcgtaggctcaatgctgagcagacccctgaccagct 336 Query: 351 cgagatggaagatggcgacgagatcgacgccatgcttcaccagac 395 |||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 337 cgagatggaagacggcgacgagattgacgccatgcttcaccagac 381
>dbj|AK103092.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118J24, full insert sequence Length = 626 Score = 299 bits (151), Expect = 6e-78 Identities = 252/285 (88%), Gaps = 3/285 (1%) Strand = Plus / Plus Query: 114 gatgtcgacgcccggcggggaggaggacaagaagccggcgggcg---agggcggcggcgc 170 ||||||| |||||| |||||||| || |||||||||||||| | ||||||||||||| Sbjct: 120 gatgtcgtcgcccgcgggggaggatgagaagaagccggcggggggagagggcggcggcgc 179 Query: 171 ccacatcaacctcaaggtcaagggacaggatggcaatgaggtgttctttcgcatcaagag 230 |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 180 ccacatcaacctcaaggtcaagggacaggatggcaacgaggtgttctttcgtatcaagag 239 Query: 231 atcgacccagctgaagaagctgatgaatgcctactgtgaccgccagtctgtggatatgag 290 ||| ||||| ||||||||||||||||| ||||||||||| |||||||| |||||||| | Sbjct: 240 atcaacccaactgaagaagctgatgaacgcctactgtgatcgccagtccgtggatatcaa 299 Query: 291 tgccatcgcgttcctgtttgacggtcgcaggctccgtaccgagcagacccctgatgagct 350 | || || ||||||||||| ||||| |||||| | | |||||||||||||| |||| Sbjct: 300 atctattgccttcctgtttgatggtcgtaggctcaatgctgagcagacccctgaccagct 359 Query: 351 cgagatggaagatggcgacgagatcgacgccatgcttcaccagac 395 |||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 360 cgagatggaagacggcgacgagattgacgccatgcttcaccagac 404
>dbj|AK062434.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-A02, full insert sequence Length = 627 Score = 299 bits (151), Expect = 6e-78 Identities = 252/285 (88%), Gaps = 3/285 (1%) Strand = Plus / Plus Query: 114 gatgtcgacgcccggcggggaggaggacaagaagccggcgggcg---agggcggcggcgc 170 ||||||| |||||| |||||||| || |||||||||||||| | ||||||||||||| Sbjct: 97 gatgtcgtcgcccgcgggggaggatgagaagaagccggcggggggagagggcggcggcgc 156 Query: 171 ccacatcaacctcaaggtcaagggacaggatggcaatgaggtgttctttcgcatcaagag 230 |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 157 ccacatcaacctcaaggtcaagggacaggatggcaacgaggtgttctttcgtatcaagag 216 Query: 231 atcgacccagctgaagaagctgatgaatgcctactgtgaccgccagtctgtggatatgag 290 ||| ||||| ||||||||||||||||| ||||||||||| |||||||| |||||||| | Sbjct: 217 atcaacccaactgaagaagctgatgaacgcctactgtgatcgccagtccgtggatatcaa 276 Query: 291 tgccatcgcgttcctgtttgacggtcgcaggctccgtaccgagcagacccctgatgagct 350 | || || ||||||||||| ||||| |||||| | | |||||||||||||| |||| Sbjct: 277 atctattgccttcctgtttgatggtcgtaggctcaatgctgagcagacccctgaccagct 336 Query: 351 cgagatggaagatggcgacgagatcgacgccatgcttcaccagac 395 |||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 337 cgagatggaagacggcgacgagattgacgccatgcttcaccagac 381
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 151 bits (76), Expect = 4e-33 Identities = 130/148 (87%) Strand = Plus / Minus Query: 197 aggatggcaatgaggtgttctttcgcatcaagagatcgacccagctgaagaagctgatga 256 ||||||| || ||||| ||||| |||||||||||||| || ||||||||||||||||||| Sbjct: 40058222 aggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaagctgatga 40058163 Query: 257 atgcctactgtgaccgccagtctgtggatatgagtgccatcgcgttcctgtttgacggtc 316 | ||||| |||||||| |||||||||||||||| ||| || || ||||| ||||| |||| Sbjct: 40058162 acgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctatttgatggtc 40058103 Query: 317 gcaggctccgtaccgagcagacccctga 344 | ||||||||| ||||||||||||||| Sbjct: 40058102 gtaggctccgtggcgagcagacccctga 40058075 Score = 135 bits (68), Expect = 2e-28 Identities = 128/148 (86%) Strand = Plus / Minus Query: 197 aggatggcaatgaggtgttctttcgcatcaagagatcgacccagctgaagaagctgatga 256 |||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 40055442 aggatggcaacgaggtgttctttcgtatcaagagatcaacccaactgaagaagctgatga 40055383 Query: 257 atgcctactgtgaccgccagtctgtggatatgagtgccatcgcgttcctgtttgacggtc 316 | ||||||||||| |||||||| |||||||| | | || || ||||||||||| |||| Sbjct: 40055382 acgcctactgtgatcgccagtccgtggatatcaaatctattgccttcctgtttgatggtc 40055323 Query: 317 gcaggctccgtaccgagcagacccctga 344 | |||||| | | |||||||||||||| Sbjct: 40055322 gtaggctcaatgctgagcagacccctga 40055295 Score = 111 bits (56), Expect = 3e-21 Identities = 70/74 (94%), Gaps = 3/74 (4%) Strand = Plus / Minus Query: 129 cggggaggaggacaagaagccggcgggcg---agggcggcggcgcccacatcaacctcaa 185 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 40059521 cggggaggaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaa 40059462 Query: 186 ggtcaagggacagg 199 |||||||||||||| Sbjct: 40059461 ggtcaagggacagg 40059448 Score = 101 bits (51), Expect = 3e-18 Identities = 80/89 (89%), Gaps = 3/89 (3%) Strand = Plus / Minus Query: 114 gatgtcgacgcccggcggggaggaggacaagaagccggcgggcg---agggcggcggcgc 170 ||||||| |||||| |||||||| || |||||||||||||| | ||||||||||||| Sbjct: 40056783 gatgtcgtcgcccgcgggggaggatgagaagaagccggcggggggagagggcggcggcgc 40056724 Query: 171 ccacatcaacctcaaggtcaagggacagg 199 ||||||||||||||||||||||||||||| Sbjct: 40056723 ccacatcaacctcaaggtcaagggacagg 40056695 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 347 agctcgagatggaagatggcgacgagatcgacgccatgcttcaccagaccggaggctgcc 406 |||||||||||||||| || |||||||||||||||||||| |||||||| |||||||||| Sbjct: 40057974 agctcgagatggaagacggggacgagatcgacgccatgctccaccagactggaggctgcc 40057915 Query: 407 t 407 | Sbjct: 40057914 t 40057914 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 347 agctcgagatggaagatggcgacgagatcgacgccatgcttcaccagac 395 |||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 40055176 agctcgagatggaagacggcgacgagattgacgccatgcttcaccagac 40055128 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 500 aaaagaacttgtgaggctctggccccatgccatagctgaaggacattag 548 |||||||||||||||||| ||| || |||||||||||||||||||||| Sbjct: 40057821 aaaagaacttgtgaggctttggtcctgtgccatagctgaaggacattag 40057773 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 cggcgggcgagggcggcggcg 169 ||||||||||||||||||||| Sbjct: 42394724 cggcgggcgagggcggcggcg 42394744 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 cggcgggcgagggcggcggcg 169 ||||||||||||||||||||| Sbjct: 42394746 cggcgggcgagggcggcggcg 42394766 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 588 ctgtcatgactcgtttatccatcccttaatat 619 |||| ||||||||||||||||| || |||||| Sbjct: 40057735 ctgttatgactcgtttatccataccctaatat 40057704
>dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0413C03 Length = 162161 Score = 151 bits (76), Expect = 4e-33 Identities = 130/148 (87%) Strand = Plus / Minus Query: 197 aggatggcaatgaggtgttctttcgcatcaagagatcgacccagctgaagaagctgatga 256 ||||||| || ||||| ||||| |||||||||||||| || ||||||||||||||||||| Sbjct: 149673 aggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaagctgatga 149614 Query: 257 atgcctactgtgaccgccagtctgtggatatgagtgccatcgcgttcctgtttgacggtc 316 | ||||| |||||||| |||||||||||||||| ||| || || ||||| ||||| |||| Sbjct: 149613 acgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctatttgatggtc 149554 Query: 317 gcaggctccgtaccgagcagacccctga 344 | ||||||||| ||||||||||||||| Sbjct: 149553 gtaggctccgtggcgagcagacccctga 149526 Score = 135 bits (68), Expect = 2e-28 Identities = 128/148 (86%) Strand = Plus / Minus Query: 197 aggatggcaatgaggtgttctttcgcatcaagagatcgacccagctgaagaagctgatga 256 |||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 146893 aggatggcaacgaggtgttctttcgtatcaagagatcaacccaactgaagaagctgatga 146834 Query: 257 atgcctactgtgaccgccagtctgtggatatgagtgccatcgcgttcctgtttgacggtc 316 | ||||||||||| |||||||| |||||||| | | || || ||||||||||| |||| Sbjct: 146833 acgcctactgtgatcgccagtccgtggatatcaaatctattgccttcctgtttgatggtc 146774 Query: 317 gcaggctccgtaccgagcagacccctga 344 | |||||| | | |||||||||||||| Sbjct: 146773 gtaggctcaatgctgagcagacccctga 146746 Score = 111 bits (56), Expect = 3e-21 Identities = 70/74 (94%), Gaps = 3/74 (4%) Strand = Plus / Minus Query: 129 cggggaggaggacaagaagccggcgggcg---agggcggcggcgcccacatcaacctcaa 185 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 150972 cggggaggaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaa 150913 Query: 186 ggtcaagggacagg 199 |||||||||||||| Sbjct: 150912 ggtcaagggacagg 150899 Score = 101 bits (51), Expect = 3e-18 Identities = 80/89 (89%), Gaps = 3/89 (3%) Strand = Plus / Minus Query: 114 gatgtcgacgcccggcggggaggaggacaagaagccggcgggcg---agggcggcggcgc 170 ||||||| |||||| |||||||| || |||||||||||||| | ||||||||||||| Sbjct: 148234 gatgtcgtcgcccgcgggggaggatgagaagaagccggcggggggagagggcggcggcgc 148175 Query: 171 ccacatcaacctcaaggtcaagggacagg 199 ||||||||||||||||||||||||||||| Sbjct: 148174 ccacatcaacctcaaggtcaagggacagg 148146 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 347 agctcgagatggaagatggcgacgagatcgacgccatgcttcaccagaccggaggctgcc 406 |||||||||||||||| || |||||||||||||||||||| |||||||| |||||||||| Sbjct: 149425 agctcgagatggaagacggggacgagatcgacgccatgctccaccagactggaggctgcc 149366 Query: 407 t 407 | Sbjct: 149365 t 149365 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 347 agctcgagatggaagatggcgacgagatcgacgccatgcttcaccagac 395 |||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 146627 agctcgagatggaagacggcgacgagattgacgccatgcttcaccagac 146579 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 500 aaaagaacttgtgaggctctggccccatgccatagctgaaggacattag 548 |||||||||||||||||| ||| || |||||||||||||||||||||| Sbjct: 149272 aaaagaacttgtgaggctttggtcctgtgccatagctgaaggacattag 149224 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 588 ctgtcatgactcgtttatccatcccttaatat 619 |||| ||||||||||||||||| || |||||| Sbjct: 149186 ctgttatgactcgtttatccataccctaatat 149155
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0678F11 Length = 154292 Score = 151 bits (76), Expect = 4e-33 Identities = 130/148 (87%) Strand = Plus / Minus Query: 197 aggatggcaatgaggtgttctttcgcatcaagagatcgacccagctgaagaagctgatga 256 ||||||| || ||||| ||||| |||||||||||||| || ||||||||||||||||||| Sbjct: 1306 aggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaagctgatga 1247 Query: 257 atgcctactgtgaccgccagtctgtggatatgagtgccatcgcgttcctgtttgacggtc 316 | ||||| |||||||| |||||||||||||||| ||| || || ||||| ||||| |||| Sbjct: 1246 acgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctatttgatggtc 1187 Query: 317 gcaggctccgtaccgagcagacccctga 344 | ||||||||| ||||||||||||||| Sbjct: 1186 gtaggctccgtggcgagcagacccctga 1159 Score = 111 bits (56), Expect = 3e-21 Identities = 70/74 (94%), Gaps = 3/74 (4%) Strand = Plus / Minus Query: 129 cggggaggaggacaagaagccggcgggcg---agggcggcggcgcccacatcaacctcaa 185 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 2605 cggggaggaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaa 2546 Query: 186 ggtcaagggacagg 199 |||||||||||||| Sbjct: 2545 ggtcaagggacagg 2532 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 347 agctcgagatggaagatggcgacgagatcgacgccatgcttcaccagaccggaggctgcc 406 |||||||||||||||| || |||||||||||||||||||| |||||||| |||||||||| Sbjct: 1058 agctcgagatggaagacggggacgagatcgacgccatgctccaccagactggaggctgcc 999 Query: 407 t 407 | Sbjct: 998 t 998 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 500 aaaagaacttgtgaggctctggccccatgccatagctgaaggacattag 548 |||||||||||||||||| ||| || |||||||||||||||||||||| Sbjct: 905 aaaagaacttgtgaggctttggtcctgtgccatagctgaaggacattag 857 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 588 ctgtcatgactcgtttatccatcccttaatat 619 |||| ||||||||||||||||| || |||||| Sbjct: 819 ctgttatgactcgtttatccataccctaatat 788
>dbj|AK069668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026B05, full insert sequence Length = 1969 Score = 151 bits (76), Expect = 4e-33 Identities = 130/148 (87%) Strand = Plus / Plus Query: 197 aggatggcaatgaggtgttctttcgcatcaagagatcgacccagctgaagaagctgatga 256 ||||||| || ||||| ||||| |||||||||||||| || ||||||||||||||||||| Sbjct: 1414 aggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaagctgatga 1473 Query: 257 atgcctactgtgaccgccagtctgtggatatgagtgccatcgcgttcctgtttgacggtc 316 | ||||| |||||||| |||||||||||||||| ||| || || ||||| ||||| |||| Sbjct: 1474 acgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctatttgatggtc 1533 Query: 317 gcaggctccgtaccgagcagacccctga 344 | ||||||||| ||||||||||||||| Sbjct: 1534 gtaggctccgtggcgagcagacccctga 1561 Score = 111 bits (56), Expect = 3e-21 Identities = 70/74 (94%), Gaps = 3/74 (4%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcg---agggcggcggcgcccacatcaacctcaa 185 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 115 cggggaggaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaa 174 Query: 186 ggtcaagggacagg 199 |||||||||||||| Sbjct: 175 ggtcaagggacagg 188 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Plus Query: 347 agctcgagatggaagatggcgacgagatcgacgccatgcttcaccagaccggaggctgcc 406 |||||||||||||||| || |||||||||||||||||||| |||||||| |||||||||| Sbjct: 1662 agctcgagatggaagacggggacgagatcgacgccatgctccaccagactggaggctgcc 1721 Query: 407 t 407 | Sbjct: 1722 t 1722 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 500 aaaagaacttgtgaggctctggccccatgccatagctgaaggacattag 548 |||||||||||||||||| ||| || |||||||||||||||||||||| Sbjct: 1815 aaaagaacttgtgaggctttggtcctgtgccatagctgaaggacattag 1863 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 588 ctgtcatgactcgtttatccatcccttaatat 619 |||| ||||||||||||||||| || |||||| Sbjct: 1901 ctgttatgactcgtttatccataccctaatat 1932
>ref|NM_124898.2| Arabidopsis thaliana SUM2 (SMALL UBIQUITIN-LIKE MODIFIER 2) (SUM2) mRNA, complete cds Length = 643 Score = 127 bits (64), Expect = 5e-26 Identities = 184/224 (82%) Strand = Plus / Plus Query: 172 cacatcaacctcaaggtcaagggacaggatggcaatgaggtgttctttcgcatcaagaga 231 |||||||| ||||| ||||||||||||||||| ||||| || |||||| | ||||||||| Sbjct: 199 cacatcaatctcaaagtcaagggacaggatggtaatgaagtcttctttaggatcaagaga 258 Query: 232 tcgacccagctgaagaagctgatgaatgcctactgtgaccgccagtctgtggatatgagt 291 || ||||| || || ||||||||||| ||||||||||| |||||||||||| | | Sbjct: 259 agcactcagctcaaaaaactgatgaatgcttactgtgaccgtcagtctgtggatttcaac 318 Query: 292 gccatcgcgttcctgtttgacggtcgcaggctccgtaccgagcagacccctgatgagctc 351 | || || ||| ||||||| ||||| | || ||| |||||||||| || |||||||| Sbjct: 319 tcaattgctttcttgtttgatggtcgtcgtcttcgtgccgagcagactccagatgagctt 378 Query: 352 gagatggaagatggcgacgagatcgacgccatgcttcaccagac 395 || ||||||||||| || |||||||| || |||||||| ||||| Sbjct: 379 gaaatggaagatggagatgagatcgatgcaatgcttcatcagac 422
>gb|AY113019.1| Arabidopsis thaliana AT5g55160/MCO15_11 mRNA, complete cds Length = 312 Score = 127 bits (64), Expect = 5e-26 Identities = 184/224 (82%) Strand = Plus / Plus Query: 172 cacatcaacctcaaggtcaagggacaggatggcaatgaggtgttctttcgcatcaagaga 231 |||||||| ||||| ||||||||||||||||| ||||| || |||||| | ||||||||| Sbjct: 46 cacatcaatctcaaagtcaagggacaggatggtaatgaagtcttctttaggatcaagaga 105 Query: 232 tcgacccagctgaagaagctgatgaatgcctactgtgaccgccagtctgtggatatgagt 291 || ||||| || || ||||||||||| ||||||||||| |||||||||||| | | Sbjct: 106 agcactcagctcaaaaaactgatgaatgcttactgtgaccgtcagtctgtggatttcaac 165 Query: 292 gccatcgcgttcctgtttgacggtcgcaggctccgtaccgagcagacccctgatgagctc 351 | || || ||| ||||||| ||||| | || ||| |||||||||| || |||||||| Sbjct: 166 tcaattgctttcttgtttgatggtcgtcgtcttcgtgccgagcagactccagatgagctt 225 Query: 352 gagatggaagatggcgacgagatcgacgccatgcttcaccagac 395 || ||||||||||| || |||||||| || |||||||| ||||| Sbjct: 226 gaaatggaagatggagatgagatcgatgcaatgcttcatcagac 269
>gb|AY075614.1| Arabidopsis thaliana AT5g55160/MCO15_11 mRNA, complete cds Length = 600 Score = 127 bits (64), Expect = 5e-26 Identities = 184/224 (82%) Strand = Plus / Plus Query: 172 cacatcaacctcaaggtcaagggacaggatggcaatgaggtgttctttcgcatcaagaga 231 |||||||| ||||| ||||||||||||||||| ||||| || |||||| | ||||||||| Sbjct: 156 cacatcaatctcaaagtcaagggacaggatggtaatgaagtcttctttaggatcaagaga 215 Query: 232 tcgacccagctgaagaagctgatgaatgcctactgtgaccgccagtctgtggatatgagt 291 || ||||| || || ||||||||||| ||||||||||| |||||||||||| | | Sbjct: 216 agcactcagctcaaaaaactgatgaatgcttactgtgaccgtcagtctgtggatttcaac 275 Query: 292 gccatcgcgttcctgtttgacggtcgcaggctccgtaccgagcagacccctgatgagctc 351 | || || ||| ||||||| ||||| | || ||| |||||||||| || |||||||| Sbjct: 276 tcaattgctttcttgtttgatggtcgtcgtcttcgtgccgagcagactccagatgagctt 335 Query: 352 gagatggaagatggcgacgagatcgacgccatgcttcaccagac 395 || ||||||||||| || |||||||| || |||||||| ||||| Sbjct: 336 gaaatggaagatggagatgagatcgatgcaatgcttcatcagac 379
>emb|X99609.1|ATSMT3 A.thaliana mRNA for SMT3 protein Length = 315 Score = 127 bits (64), Expect = 5e-26 Identities = 184/224 (82%) Strand = Plus / Plus Query: 172 cacatcaacctcaaggtcaagggacaggatggcaatgaggtgttctttcgcatcaagaga 231 |||||||| ||||| ||||||||||||||||| || ||||| |||||| | ||||||||| Sbjct: 49 cacatcaatctcaaagtcaagggacaggatggaaacgaggttttctttaggatcaagaga 108 Query: 232 tcgacccagctgaagaagctgatgaatgcctactgtgaccgccagtctgtggatatgagt 291 || ||||| ||||||||||||||||| ||||||||||| || |||||||| |||| Sbjct: 109 agcactcagctcaagaagctgatgaatgcttactgtgaccggcaatctgtggacatgaac 168 Query: 292 gccatcgcgttcctgtttgacggtcgcaggctccgtaccgagcagacccctgatgagctc 351 |||| || ||| ||||||| || || | || ||| | ||||| || || |||||||| Sbjct: 169 tccattgctttcttgtttgatgggcgtcgtcttcgtgctgagcaaactcccgatgagctt 228 Query: 352 gagatggaagatggcgacgagatcgacgccatgcttcaccagac 395 || ||||||||||| || |||||||| || |||||||| ||||| Sbjct: 229 gacatggaagatggagatgagatcgatgcaatgcttcatcagac 272
>gb|AF510520.1| Arabidopsis thaliana small ubiquitin-like modifier 2 (SUMO) mRNA, complete cds Length = 584 Score = 127 bits (64), Expect = 5e-26 Identities = 184/224 (82%) Strand = Plus / Plus Query: 172 cacatcaacctcaaggtcaagggacaggatggcaatgaggtgttctttcgcatcaagaga 231 |||||||| ||||| ||||||||||||||||| ||||| || |||||| | ||||||||| Sbjct: 140 cacatcaatctcaaagtcaagggacaggatggtaatgaagtcttctttaggatcaagaga 199 Query: 232 tcgacccagctgaagaagctgatgaatgcctactgtgaccgccagtctgtggatatgagt 291 || ||||| || || ||||||||||| ||||||||||| |||||||||||| | | Sbjct: 200 agcactcagctcaaaaaactgatgaatgcttactgtgaccgtcagtctgtggatttcaac 259 Query: 292 gccatcgcgttcctgtttgacggtcgcaggctccgtaccgagcagacccctgatgagctc 351 | || || ||| ||||||| ||||| | || ||| |||||||||| || |||||||| Sbjct: 260 tcaattgctttcttgtttgatggtcgtcgtcttcgtgccgagcagactccagatgagctt 319 Query: 352 gagatggaagatggcgacgagatcgacgccatgcttcaccagac 395 || ||||||||||| || |||||||| || |||||||| ||||| Sbjct: 320 gaaatggaagatggagatgagatcgatgcaatgcttcatcagac 363
>gb|AY085191.1| Arabidopsis thaliana clone 13697 mRNA, complete sequence Length = 643 Score = 119 bits (60), Expect = 1e-23 Identities = 183/224 (81%) Strand = Plus / Plus Query: 172 cacatcaacctcaaggtcaagggacaggatggcaatgaggtgttctttcgcatcaagaga 231 |||||||| ||||| ||||||||||||||||| ||||| || |||||| | ||||||||| Sbjct: 199 cacatcaatctcaaagtcaagggacaggatggtaatgaagtcttctttaggatcaagaga 258 Query: 232 tcgacccagctgaagaagctgatgaatgcctactgtgaccgccagtctgtggatatgagt 291 || ||||| || || ||||||||||| ||||||||||| || ||||||||| | | Sbjct: 259 agcactcagctcaaaaaactgatgaatgcttactgtgaccgtcaatctgtggatttcaac 318 Query: 292 gccatcgcgttcctgtttgacggtcgcaggctccgtaccgagcagacccctgatgagctc 351 | || || ||| ||||||| ||||| | || ||| |||||||||| || |||||||| Sbjct: 319 tcaattgctttcttgtttgatggtcgtcgtcttcgtgccgagcagactccagatgagctt 378 Query: 352 gagatggaagatggcgacgagatcgacgccatgcttcaccagac 395 || ||||||||||| || |||||||| || |||||||| ||||| Sbjct: 379 gaaatggaagatggagatgagatcgatgcaatgcttcatcagac 422
>ref|NM_118818.2| Arabidopsis thaliana SUM1 (SMALL UBIQUITIN-LIKE MODIFIER 1) (SUM1) mRNA, complete cds Length = 710 Score = 111 bits (56), Expect = 3e-21 Identities = 182/224 (81%) Strand = Plus / Plus Query: 172 cacatcaacctcaaggtcaagggacaggatggcaatgaggtgttctttcgcatcaagaga 231 |||||||| ||||| ||||||||||||||||| || ||||| |||||| | ||||||||| Sbjct: 187 cacatcaatctcaaagtcaagggacaggatggaaacgaggttttctttaggatcaagaga 246 Query: 232 tcgacccagctgaagaagctgatgaatgcctactgtgaccgccagtctgtggatatgagt 291 || ||||| ||||||||||||||||| ||||||||||| || |||||||| |||| Sbjct: 247 agcactcagctcaagaagctgatgaatgcttactgtgaccggcaatctgtggacatgaac 306 Query: 292 gccatcgcgttcctgtttgacggtcgcaggctccgtaccgagcagacccctgatgagctc 351 |||| || ||| ||||||| || || | || ||| | ||||| || || |||||||| Sbjct: 307 tccattgctttcttgtttgatgggcgtcgtcttcgtgctgagcaaactcccgatgagctt 366 Query: 352 gagatggaagatggcgacgagatcgacgccatgcttcaccagac 395 || ||||| ||||| || |||||||| || ||||| || ||||| Sbjct: 367 gacatggaggatggtgatgagatcgatgcgatgctccatcagac 410
>gb|BT008437.1| Arabidopsis thaliana At4g26840 gene, complete cds Length = 303 Score = 111 bits (56), Expect = 3e-21 Identities = 182/224 (81%) Strand = Plus / Plus Query: 172 cacatcaacctcaaggtcaagggacaggatggcaatgaggtgttctttcgcatcaagaga 231 |||||||| ||||| ||||||||||||||||| || ||||| |||||| | ||||||||| Sbjct: 49 cacatcaatctcaaagtcaagggacaggatggaaacgaggttttctttaggatcaagaga 108 Query: 232 tcgacccagctgaagaagctgatgaatgcctactgtgaccgccagtctgtggatatgagt 291 || ||||| ||||||||||||||||| ||||||||||| || |||||||| |||| Sbjct: 109 agcactcagctcaagaagctgatgaatgcttactgtgaccggcaatctgtggacatgaac 168 Query: 292 gccatcgcgttcctgtttgacggtcgcaggctccgtaccgagcagacccctgatgagctc 351 |||| || ||| ||||||| || || | || ||| | ||||| || || |||||||| Sbjct: 169 tccattgctttcttgtttgatgggcgtcgtcttcgtgctgagcaaactcccgatgagctt 228 Query: 352 gagatggaagatggcgacgagatcgacgccatgcttcaccagac 395 || ||||| ||||| || |||||||| || ||||| || ||||| Sbjct: 229 gacatggaggatggtgatgagatcgatgcgatgctccatcagac 272
>gb|AY072368.1| Arabidopsis thaliana ubiquitin-like protein (At4g26840) mRNA, complete cds Length = 584 Score = 111 bits (56), Expect = 3e-21 Identities = 182/224 (81%) Strand = Plus / Plus Query: 172 cacatcaacctcaaggtcaagggacaggatggcaatgaggtgttctttcgcatcaagaga 231 |||||||| ||||| ||||||||||||||||| || ||||| |||||| | ||||||||| Sbjct: 113 cacatcaatctcaaagtcaagggacaggatggaaacgaggttttctttaggatcaagaga 172 Query: 232 tcgacccagctgaagaagctgatgaatgcctactgtgaccgccagtctgtggatatgagt 291 || ||||| ||||||||||||||||| ||||||||||| || |||||||| |||| Sbjct: 173 agcactcagctcaagaagctgatgaatgcttactgtgaccggcaatctgtggacatgaac 232 Query: 292 gccatcgcgttcctgtttgacggtcgcaggctccgtaccgagcagacccctgatgagctc 351 |||| || ||| ||||||| || || | || ||| | ||||| || || |||||||| Sbjct: 233 tccattgctttcttgtttgatgggcgtcgtcttcgtgctgagcaaactcccgatgagctt 292 Query: 352 gagatggaagatggcgacgagatcgacgccatgcttcaccagac 395 || ||||| ||||| || |||||||| || ||||| || ||||| Sbjct: 293 gacatggaggatggtgatgagatcgatgcgatgctccatcagac 336
>gb|AY086914.1| Arabidopsis thaliana clone 29414 mRNA, complete sequence Length = 710 Score = 111 bits (56), Expect = 3e-21 Identities = 182/224 (81%) Strand = Plus / Plus Query: 172 cacatcaacctcaaggtcaagggacaggatggcaatgaggtgttctttcgcatcaagaga 231 |||||||| ||||| ||||||||||||||||| || ||||| |||||| | ||||||||| Sbjct: 187 cacatcaatctcaaagtcaagggacaggatggaaacgaggttttctttaggatcaagaga 246 Query: 232 tcgacccagctgaagaagctgatgaatgcctactgtgaccgccagtctgtggatatgagt 291 || ||||| ||||||||||||||||| ||||||||||| || |||||||| |||| Sbjct: 247 agcactcagctcaagaagctgatgaatgcttactgtgaccggcaatctgtggacatgaac 306 Query: 292 gccatcgcgttcctgtttgacggtcgcaggctccgtaccgagcagacccctgatgagctc 351 |||| || ||| ||||||| || || | || ||| | ||||| || || |||||||| Sbjct: 307 tccattgctttcttgtttgatgggcgtcgtcttcgtgctgagcaaactcccgatgagctt 366 Query: 352 gagatggaagatggcgacgagatcgacgccatgcttcaccagac 395 || ||||| ||||| || |||||||| || ||||| || ||||| Sbjct: 367 gacatggaggatggtgatgagatcgatgcgatgctccatcagac 410
>gb|AF510519.1| Arabidopsis thaliana small ubiquitin-like modifier 1 (SUMO) mRNA, complete cds Length = 619 Score = 111 bits (56), Expect = 3e-21 Identities = 182/224 (81%) Strand = Plus / Plus Query: 172 cacatcaacctcaaggtcaagggacaggatggcaatgaggtgttctttcgcatcaagaga 231 |||||||| ||||| ||||||||||||||||| || ||||| |||||| | ||||||||| Sbjct: 149 cacatcaatctcaaagtcaagggacaggatggaaacgaggttttctttaggatcaagaga 208 Query: 232 tcgacccagctgaagaagctgatgaatgcctactgtgaccgccagtctgtggatatgagt 291 || ||||| ||||||||||||||||| ||||||||||| || |||||||| |||| Sbjct: 209 agcactcagctcaagaagctgatgaatgcttactgtgaccggcaatctgtggacatgaac 268 Query: 292 gccatcgcgttcctgtttgacggtcgcaggctccgtaccgagcagacccctgatgagctc 351 |||| || ||| ||||||| || || | || ||| | ||||| || || |||||||| Sbjct: 269 tccattgctttcttgtttgatgggcgtcgtcttcgtgctgagcaaactcccgatgagctt 328 Query: 352 gagatggaagatggcgacgagatcgacgccatgcttcaccagac 395 || ||||| ||||| || |||||||| || ||||| || ||||| Sbjct: 329 gacatggaggatggtgatgagatcgatgcgatgctccatcagac 372
>emb|BX828793.1|CNS0A2L0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL39ZA02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 599 Score = 111 bits (56), Expect = 3e-21 Identities = 182/224 (81%) Strand = Plus / Plus Query: 172 cacatcaacctcaaggtcaagggacaggatggcaatgaggtgttctttcgcatcaagaga 231 |||||||| ||||| ||||||||||||||||| || ||||| |||||| | ||||||||| Sbjct: 122 cacatcaatctcaaagtcaagggacaggatggaaacgaggttttctttaggatcaagaga 181 Query: 232 tcgacccagctgaagaagctgatgaatgcctactgtgaccgccagtctgtggatatgagt 291 || ||||| ||||||||||||||||| ||||||||||| || |||||||| |||| Sbjct: 182 agcactcagctcaagaagctgatgaatgcttactgtgaccggcaatctgtggacatgaac 241 Query: 292 gccatcgcgttcctgtttgacggtcgcaggctccgtaccgagcagacccctgatgagctc 351 |||| || ||| ||||||| || || | || ||| | ||||| || || |||||||| Sbjct: 242 tccattgctttcttgtttgatgggcgtcgtcttcgtgctgagcaaactcccgatgagctt 301 Query: 352 gagatggaagatggcgacgagatcgacgccatgcttcaccagac 395 || ||||| ||||| || |||||||| || ||||| || ||||| Sbjct: 302 gacatggaggatggtgatgagatcgatgcgatgctccatcagac 345
>gb|AC189587.1| Brassica rapa subsp. pekinensis clone KBrH012K23, complete sequence Length = 128564 Score = 83.8 bits (42), Expect = 7e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 197 aggatggcaatgaggtgttctttcgcatcaagagatcgacccagctgaagaagctgatga 256 ||||||| ||||||||||||||| | ||||||||| || ||||||||||||||||||| Sbjct: 55886 aggatgggaatgaggtgttctttaggatcaagagaagcactcagctgaagaagctgatga 55945 Query: 257 atgcctactgtgac 270 |||| ||||||||| Sbjct: 55946 atgcttactgtgac 55959 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 172 cacatcaacctcaaggtcaagggacagg 199 |||||||| |||||||||||||| |||| Sbjct: 55250 cacatcaatctcaaggtcaagggtcagg 55277
>gb|AF451278.1| Phaseolus vulgaris ubiquitin-like protein SMT3 (SMT3) mRNA, partial cds Length = 449 Score = 79.8 bits (40), Expect = 1e-11 Identities = 178/224 (79%) Strand = Plus / Plus Query: 172 cacatcaacctcaaggtcaagggacaggatggcaatgaggtgttctttcgcatcaagaga 231 ||||||||||| || |||||||| |||||||| |||||||||||||| | ||||||||| Sbjct: 30 cacatcaaccttaaagtcaaggggcaggatgggaatgaggtgttcttcaggatcaagaga 89 Query: 232 tcgacccagctgaagaagctgatgaatgcctactgtgaccgccagtctgtggatatgagt 291 ||||| |||| ||||| |||||||| || |||||||| ||||| || ||| | | Sbjct: 90 agcacccaattgaaaaagcttatgaatgcttattgtgaccgacagtcagttgatttcaac 149 Query: 292 gccatcgcgttcctgtttgacggtcgcaggctccgtaccgagcagacccctgatgagctc 351 ||||||| || || ||||| || || | || ||| | |||||||| ||||||||| | Sbjct: 150 tccatcgcttttctctttgatggacgtcgccttcgtgctgagcagactcctgatgagttg 209 Query: 352 gagatggaagatggcgacgagatcgacgccatgcttcaccagac 395 || ||||| ||||| || || || || ||||||||||| ||||| Sbjct: 210 gaaatggaggatggtgatgaaattgatgccatgcttcatcagac 253
>emb|AJ001901.1|CARNAUP Cicer arietinum mRNA for Ubiquitin protein Length = 552 Score = 77.8 bits (39), Expect = 4e-11 Identities = 153/191 (80%) Strand = Plus / Plus Query: 187 gtcaagggacaggatggcaatgaggtgttctttcgcatcaagagatcgacccagctgaag 246 ||||| ||||||||||| ||||| || |||||| | || |||||| || || |||||| Sbjct: 97 gtcaaaggacaggatggaaatgaagtattctttaggataaagagaaacactcaactgaag 156 Query: 247 aagctgatgaatgcctactgtgaccgccagtctgtggatatgagtgccatcgcgttcctg 306 |||||||||||||| || ||||| || || |||||||| ||| | | || || || | Sbjct: 157 aagctgatgaatgcatattgtgatcgacaatctgtggacttgaattcaattgccttttta 216 Query: 307 tttgacggtcgcaggctccgtaccgagcagacccctgatgagctcgagatggaagatggc 366 ||||| |||||||| |||||| | || ||||| ||||||||||| || ||||| ||||| Sbjct: 217 tttgatggtcgcagactccgtgcagaacagacacctgatgagctagacatggaggatgga 276 Query: 367 gacgagatcga 377 || |||||||| Sbjct: 277 gatgagatcga 287
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 73.8 bits (37), Expect = 7e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 197 aggatggcaatgaggtgttctttcgcatcaagagatcgacccagctgaagaagctgatga 256 ||||||| || ||||| |||||| | ||||||||| || ||||| ||||||||||||| Sbjct: 2003 aggatggaaacgaggttttctttaggatcaagagaagcactcagctcaagaagctgatga 2062 Query: 257 atgcctactgtgaccgccagtctgtggatatga 289 |||| ||||||||||| || |||||||| |||| Sbjct: 2063 atgcttactgtgaccggcaatctgtggacatga 2095 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 172 cacatcaacctcaaggtcaagggacagg 199 |||||||| ||||| ||||||||||||| Sbjct: 1369 cacatcaatctcaaagtcaagggacagg 1396
>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65 Length = 198320 Score = 73.8 bits (37), Expect = 7e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 197 aggatggcaatgaggtgttctttcgcatcaagagatcgacccagctgaagaagctgatga 256 ||||||| || ||||| |||||| | ||||||||| || ||||| ||||||||||||| Sbjct: 195323 aggatggaaacgaggttttctttaggatcaagagaagcactcagctcaagaagctgatga 195382 Query: 257 atgcctactgtgaccgccagtctgtggatatga 289 |||| ||||||||||| || |||||||| |||| Sbjct: 195383 atgcttactgtgaccggcaatctgtggacatga 195415 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 172 cacatcaacctcaaggtcaagggacagg 199 |||||||| ||||| ||||||||||||| Sbjct: 194689 cacatcaatctcaaagtcaagggacagg 194716
>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project) Length = 128574 Score = 73.8 bits (37), Expect = 7e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 197 aggatggcaatgaggtgttctttcgcatcaagagatcgacccagctgaagaagctgatga 256 ||||||| || ||||| |||||| | ||||||||| || ||||| ||||||||||||| Sbjct: 46160 aggatggaaacgaggttttctttaggatcaagagaagcactcagctcaagaagctgatga 46219 Query: 257 atgcctactgtgaccgccagtctgtggatatga 289 |||| ||||||||||| || |||||||| |||| Sbjct: 46220 atgcttactgtgaccggcaatctgtggacatga 46252 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 172 cacatcaacctcaaggtcaagggacagg 199 |||||||| ||||| ||||||||||||| Sbjct: 45526 cacatcaatctcaaagtcaagggacagg 45553
>dbj|AB010071.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCO15 Length = 82918 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 197 aggatggcaatgaggtgttctttcgcatcaagagatcgacccagctgaagaagctgatga 256 ||||||| ||||| || |||||| | ||||||||| || ||||| || || ||||||| Sbjct: 42797 aggatggtaatgaagtcttctttaggatcaagagaagcactcagctcaaaaaactgatga 42738 Query: 257 atgcctactgtgaccgccagtctgtggat 285 |||| ||||||||||| |||||||||||| Sbjct: 42737 atgcttactgtgaccgtcagtctgtggat 42709 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 355 atggaagatggcgacgagatcgacgccatgcttcaccagac 395 ||||||||||| || |||||||| || |||||||| ||||| Sbjct: 42547 atggaagatggagatgagatcgatgcaatgcttcatcagac 42507 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 172 cacatcaacctcaaggtcaagggacagg 199 |||||||| ||||| ||||||||||||| Sbjct: 43444 cacatcaatctcaaagtcaagggacagg 43417
>dbj|AK176098.1| Arabidopsis thaliana mRNA for ubiquitin-like protein SMT3-like, partial cds, clone: RAFL22-88-H02 Length = 301 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 329 ccgagcagacccctgatgagctcgagatggaagatggcgacgagatcgacgccatgcttc 388 |||||||||| || |||||||| || ||||||||||| || |||||||| || ||||||| Sbjct: 4 ccgagcagactccagatgagcttgaaatggaagatggagatgagatcgatgcaatgcttc 63 Query: 389 accagac 395 | ||||| Sbjct: 64 atcagac 70
>gb|AY817504.1| Schistosoma mansoni small ubiquitin modifier 2 mRNA, complete cds Length = 742 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 175 atcaacctcaaggtcaagggacaggatggcaatgaggt 212 ||||| |||||||||||||| |||||||||| |||||| Sbjct: 369 atcaatctcaaggtcaagggccaggatggcagtgaggt 406
>ref|XR_024300.1| PREDICTED: Pan troglodytes similar to brain factor-1 (LOC467416), mRNA Length = 2359 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcgagggcggc 165 ||||| |||||| |||||| |||||||||||||||| Sbjct: 420 cgggggggaggagaagaagggggcgggcgagggcggc 456
>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome Length = 3225748 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 cggcgggcgagggcggcggcg 169 ||||||||||||||||||||| Sbjct: 706686 cggcgggcgagggcggcggcg 706666
>gb|DQ387966.1| Ceratotherium simum forkhead box G1 (FoxG1) gene, complete cds Length = 1461 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcgagggcggc 165 ||||| |||||| |||||| |||||||||||||||| Sbjct: 444 cgggggggaggagaagaagggggcgggcgagggcggc 480
>gb|DQ387965.1| Equus burchellii forkhead box G1 (FoxG1) gene, complete cds Length = 1467 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcgagggcggc 165 ||||| |||||| |||||| |||||||||||||||| Sbjct: 450 cgggggggaggagaagaagggggcgggcgagggcggc 486
>gb|DQ387964.1| Epomophorus gambianus forkhead box G1 (FoxG1) gene, complete cds Length = 1458 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcgagggcggc 165 ||||| |||||| |||||| |||||||||||||||| Sbjct: 441 cgggggggaggagaagaagggggcgggcgagggcggc 477
>gb|DQ387963.1| Pipistrellus rusticus forkhead box G1 (FoxG1) gene, complete cds Length = 1455 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcgagggcggc 165 ||||| |||||| |||||| |||||||||||||||| Sbjct: 438 cgggggggaggagaagaagggggcgggcgagggcggc 474
>gb|DQ387962.1| Cercopithecus pygerythrus forkhead box G1 (FoxG1) gene, complete cds Length = 1470 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcgagggcggc 165 ||||| |||||| |||||| |||||||||||||||| Sbjct: 453 cgggggggaggagaagaagggggcgggcgagggcggc 489
>gb|DQ387961.1| Cebus capucinus forkhead box G1 (FoxG1) gene, complete cds Length = 1470 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcgagggcggc 165 ||||| |||||| |||||| |||||||||||||||| Sbjct: 453 cgggggggaggagaagaagggggcgggcgagggcggc 489
>ref|NM_005249.3| Homo sapiens forkhead box G1B (FOXG1B), mRNA Length = 2600 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcgagggcggc 165 ||||| |||||| |||||| |||||||||||||||| Sbjct: 652 cgggggggaggagaagaagggggcgggcgagggcggc 688
>gb|BC035020.2| Homo sapiens forkhead box G1B, mRNA (cDNA clone IMAGE:4823883), with apparent retained intron Length = 2443 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcgagggcggc 165 ||||| |||||| |||||| |||||||||||||||| Sbjct: 495 cgggggggaggagaagaagggggcgggcgagggcggc 531
>gb|BC040960.1| Homo sapiens forkhead box G1A, mRNA (cDNA clone IMAGE:5248592), partial cds Length = 2026 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcgagggcggc 165 ||||| |||||| |||||| |||||||||||||||| Sbjct: 56 cgggggggaggagaagaagggggcgggcgagggcggc 92
>gb|BC050072.1| Homo sapiens forkhead box G1B, mRNA (cDNA clone MGC:48322 IMAGE:5284335), complete cds Length = 2769 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcgagggcggc 165 ||||| |||||| |||||| |||||||||||||||| Sbjct: 822 cgggggggaggagaagaagggggcgggcgagggcggc 858
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483G10 Length = 190721 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 cggcgggcgagggcggcggcg 169 ||||||||||||||||||||| Sbjct: 54062 cggcgggcgagggcggcggcg 54082 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 cggcgggcgagggcggcggcg 169 ||||||||||||||||||||| Sbjct: 54084 cggcgggcgagggcggcggcg 54104
>emb|X78202.1|HSHBFG2 H.sapiens HBF-G2 gene Length = 2904 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcgagggcggc 165 ||||| |||||| |||||| |||||||||||||||| Sbjct: 983 cgggggggaggagaagaagggggcgggcgagggcggc 1019
>emb|X74144.1|HSHBF3A H.sapiens HBF-3 mRNA Length = 672 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcgagggcggc 165 ||||| |||||| |||||| |||||||||||||||| Sbjct: 9 cgggggggaggagaagaagggggcgggcgagggcggc 45
>emb|X74143.1|HSHBF2A H.sapiens HBF-2 mRNA for transcription factor Length = 1703 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcgagggcggc 165 ||||| |||||| |||||| |||||||||||||||| Sbjct: 597 cgggggggaggagaagaagggggcgggcgagggcggc 633
>emb|AL049777.5|CNS00002 Human chromosome 14 DNA sequence BAC R-966I7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 170307 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 129 cggggaggaggacaagaagccggcgggcgagggcggc 165 ||||| |||||| |||||| |||||||||||||||| Sbjct: 93372 cgggggggaggagaagaagggggcgggcgagggcggc 93408
>emb|BX088544.6| Zebrafish DNA sequence from clone DKEY-15K2 in linkage group 3, complete sequence Length = 68831 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 244 aagaagctgatgaatgcctactgt 267 |||||| ||||||||||||||||| Sbjct: 55494 aagaagatgatgaatgcctactgt 55517
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 gcgggcgagggcggcggcgc 170 |||||||||||||||||||| Sbjct: 917263 gcgggcgagggcggcggcgc 917282
>emb|AM236080.1| Rhizobium leguminosarum bv. viciae chromosome complete genome, strain 3841 Length = 5057142 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 ggcgacgagatcgacgccat 383 |||||||||||||||||||| Sbjct: 3123878 ggcgacgagatcgacgccat 3123897
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ggcgggcgagggcggcggcg 169 |||||||||||||||||||| Sbjct: 733826 ggcgggcgagggcggcggcg 733845 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 gcgggcgagggcggcggcgc 170 |||||||||||||||||||| Sbjct: 1458159 gcgggcgagggcggcggcgc 1458178 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 aggggccgccgaggggatgtcgac 122 ||||||| |||||||||||||||| Sbjct: 1609490 aggggccaccgaggggatgtcgac 1609467
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ctcgagatggaagatggcga 368 |||||||||||||||||||| Sbjct: 2670868 ctcgagatggaagatggcga 2670849
>ref|NM_001075955.1| Bos taurus similar to nicalin (MGC138978), mRNA gb|BC116087.1| Bos taurus similar to nicalin, mRNA (cDNA clone MGC:138978 IMAGE:8093833), complete cds Length = 2004 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 237 ccagctgaagaagctgatgaatgcctac 264 |||||||||| || |||||||||||||| Sbjct: 1591 ccagctgaagcaggtgatgaatgcctac 1618
>ref|XM_001000484.1| PREDICTED: Mus musculus similar to zinc finger protein 507 (LOC672686), mRNA Length = 6912 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 tctggccccatgccatagct 536 |||||||||||||||||||| Sbjct: 5126 tctggccccatgccatagct 5107
>ref|XM_001002219.1| PREDICTED: Mus musculus similar to zinc finger protein 507 (LOC677306), mRNA Length = 7154 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 tctggccccatgccatagct 536 |||||||||||||||||||| Sbjct: 5369 tctggccccatgccatagct 5350
>ref|XM_145521.9| PREDICTED: Mus musculus similar to zinc finger protein 507 (LOC668501), mRNA Length = 7215 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 tctggccccatgccatagct 536 |||||||||||||||||||| Sbjct: 5429 tctggccccatgccatagct 5410
>emb|CT010460.16| Mouse DNA sequence from clone RP23-311G21 on chromosome 12, complete sequence Length = 243288 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 171 ccacatcaacctcaaggtcaagggacag 198 ||||| |||||||||| ||||||||||| Sbjct: 154600 ccacagcaacctcaagatcaagggacag 154627
>gb|AF402961.1| Oryza sativa chromosome 4 clone F8-40, genomic sequence Length = 37246 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 605 tccatcccttaatatatcaaccta 628 |||||||||||||||| ||||||| Sbjct: 34667 tccatcccttaatatagcaaccta 34644
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ggcgggcgagggcggcggcg 169 |||||||||||||||||||| Sbjct: 3172103 ggcgggcgagggcggcggcg 3172084
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ggcgggcgagggcggcggcg 169 |||||||||||||||||||| Sbjct: 1628847 ggcgggcgagggcggcggcg 1628866
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 ggcgacgagatcgacgccat 383 |||||||||||||||||||| Sbjct: 2672799 ggcgacgagatcgacgccat 2672818
>gb|AC098717.3| Mus musculus BAC clone RP23-2G2 from 12, complete sequence Length = 211702 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 171 ccacatcaacctcaaggtcaagggacag 198 ||||| |||||||||| ||||||||||| Sbjct: 122677 ccacagcaacctcaagatcaagggacag 122650
>gb|AC139045.7| Mus musculus chromosome 7, clone RP23-466H15, complete sequence Length = 186309 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 tctggccccatgccatagct 536 |||||||||||||||||||| Sbjct: 60908 tctggccccatgccatagct 60927
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 351 cgagatggaagatggcgacgagatcgac 378 |||||||||||| | ||||||||||||| Sbjct: 3927249 cgagatggaagaggacgacgagatcgac 3927276
>dbj|AK162510.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530039E11 product:hypothetical Zn-finger, C2H2 type/Zinc finger C2H2 type domain profile containing protein, full insert sequence Length = 3599 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 tctggccccatgccatagct 536 |||||||||||||||||||| Sbjct: 3197 tctggccccatgccatagct 3178
>dbj|AK156530.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830028K15 product:hypothetical protein, full insert sequence Length = 3562 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 503 agaacttgtgaggctctggcccca 526 |||||||| ||||||||||||||| Sbjct: 2406 agaacttgggaggctctggcccca 2429
>ref|XM_813686.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507089.110) partial mRNA Length = 2124 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 gatggaagatggcgacgaga 373 |||||||||||||||||||| Sbjct: 60 gatggaagatggcgacgaga 79
>ref|XM_805825.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506725.70) partial mRNA Length = 2121 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 gatggaagatggcgacgaga 373 |||||||||||||||||||| Sbjct: 60 gatggaagatggcgacgaga 79
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ggcgggcgagggcggcggcg 169 |||||||||||||||||||| Sbjct: 12684543 ggcgggcgagggcggcggcg 12684524
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ggcgggcgagggcggcggcg 169 |||||||||||||||||||| Sbjct: 8856541 ggcgggcgagggcggcggcg 8856522
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ggcgggcgagggcggcggcg 169 |||||||||||||||||||| Sbjct: 21388209 ggcgggcgagggcggcggcg 21388228 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ggcgggcgagggcggcggcg 169 |||||||||||||||||||| Sbjct: 29754252 ggcgggcgagggcggcggcg 29754233
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 ggcgagggcggcggcgcccacatcaacc 181 |||||||||||||||| || |||||||| Sbjct: 3403604 ggcgagggcggcggcgtcctcatcaacc 3403631
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 cggcgggcgagggcggcggc 168 |||||||||||||||||||| Sbjct: 239243 cggcgggcgagggcggcggc 239262
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 cggcgggcgagggcggcggc 168 |||||||||||||||||||| Sbjct: 153163 cggcgggcgagggcggcggc 153182
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 cggcgggcgagggcggcggc 168 |||||||||||||||||||| Sbjct: 226868 cggcgggcgagggcggcggc 226849
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ggcgggcgagggcggcggcg 169 |||||||||||||||||||| Sbjct: 1515963 ggcgggcgagggcggcggcg 1515982
>emb|AL604064.10| Zebrafish DNA sequence from clone BUSM1-180G5 in linkage group 3, complete sequence Length = 136041 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 244 aagaagctgatgaatgcctactgt 267 |||||| ||||||||||||||||| Sbjct: 73203 aagaagatgatgaatgcctactgt 73226
>gb|AC067738.17| Homo sapiens 3 BAC RP11-381H1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 82883 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 acatgaaagtctaaaaagaa 506 |||||||||||||||||||| Sbjct: 38029 acatgaaagtctaaaaagaa 38048
>dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ2056_H01 Length = 123428 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ggcgggcgagggcggcggcg 169 |||||||||||||||||||| Sbjct: 10597 ggcgggcgagggcggcggcg 10578
>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1191_G08 Length = 172832 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ggcgggcgagggcggcggcg 169 |||||||||||||||||||| Sbjct: 123231 ggcgggcgagggcggcggcg 123212
>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1001_B06 Length = 134810 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ggcgggcgagggcggcggcg 169 |||||||||||||||||||| Sbjct: 126862 ggcgggcgagggcggcggcg 126843
>dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528B02 Length = 144495 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ggcgggcgagggcggcggcg 169 |||||||||||||||||||| Sbjct: 22170 ggcgggcgagggcggcggcg 22151
>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0041C07 Length = 179047 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ggcgggcgagggcggcggcg 169 |||||||||||||||||||| Sbjct: 150481 ggcgggcgagggcggcggcg 150462
>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1712_E04 Length = 110098 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ggcgggcgagggcggcggcg 169 |||||||||||||||||||| Sbjct: 48162 ggcgggcgagggcggcggcg 48181
>dbj|AK129283.1| Mus musculus mRNA for mKIAA1084 protein Length = 6646 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 tctggccccatgccatagct 536 |||||||||||||||||||| Sbjct: 4875 tctggccccatgccatagct 4856
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 catgcttcaccagaccggag 400 |||||||||||||||||||| Sbjct: 208072 catgcttcaccagaccggag 208091
>gb|AC120378.7| Mus musculus chromosome 7, clone RP24-263N3, complete sequence Length = 143396 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 tctggccccatgccatagct 536 |||||||||||||||||||| Sbjct: 87647 tctggccccatgccatagct 87666
>gb|U95087.1|KPU95087 Klebsiella pneumoniae malonate decarboxylase gene cluster (mdcA, mdcB, mdcC, mdcD, mdcE, mdcF, mdcG, mdcH, mdcR) genes, complete cds Length = 8768 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ggcgggcgagggcggcggcg 169 |||||||||||||||||||| Sbjct: 2363 ggcgggcgagggcggcggcg 2344
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 atgaatgcctactgtgaccg 272 |||||||||||||||||||| Sbjct: 3429388 atgaatgcctactgtgaccg 3429407
>gb|U56096.1|KPU56096 Klebsiella pneumoniae MdcA, MdcB, MdcC, MdcD, MdcE, MdcF, and MdcG, genes, complete cds Length = 7420 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ggcgggcgagggcggcggcg 169 |||||||||||||||||||| Sbjct: 2355 ggcgggcgagggcggcggcg 2336
>emb|AL591884.11| Mouse DNA sequence from clone RP23-183N8 on chromosome 2, complete sequence Length = 204495 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 accttcctcgttcgttcctc 61 |||||||||||||||||||| Sbjct: 18535 accttcctcgttcgttcctc 18554
>ref|NM_012560.2| Rattus norvegicus forkhead box G1 (Foxg1), mRNA Length = 2811 Score = 40.1 bits (20), Expect = 9.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 130 ggggaggaggacaagaagccggcgggcgagggcggc 165 |||| |||||| |||||| |||||||||||||||| Sbjct: 868 gggggggaggagaagaagggggcgggcgagggcggc 903
>gb|M87634.1|RATBF1A Rat BF-1 mRNA, complete cds Length = 2816 Score = 40.1 bits (20), Expect = 9.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 130 ggggaggaggacaagaagccggcgggcgagggcggc 165 |||| |||||| |||||| |||||||||||||||| Sbjct: 869 gggggggaggagaagaagggggcgggcgagggcggc 904 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 95,887,086 Number of extensions: 5115772 Number of successful extensions: 100879 Number of sequences better than 10.0: 98 Number of HSP's gapped: 100859 Number of HSP's successfully gapped: 148 Length of query: 656 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 634 Effective length of database: 18,508,616,841 Effective search space: 11734463077194 Effective search space used: 11734463077194 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)