ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf69h02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK099541:Os05g0463700 | 27 | 3.3 | 2 | Os09g0301700:Os09g0301700 | 27 | 4.3 | 3 | AK107650:Os05g0112000 | 27 | 4.3 | 4 | AK105930:Os05g0112000 | 27 | 4.3 | 5 | AK105623:Os05g0112000 | 27 | 4.3 | 6 | AK102925:Os05g0542900 | 27 | 4.3 | 7 | AK102800:Os05g0112000 | 27 | 4.3 | 8 | AK100237:Os10g0577700 | 27 | 4.3 | 9 | AK066547:Os08g0356700 | 27 | 4.3 | 10 | AK061718:Os10g0577700 | 27 | 4.3 | 11 | AK059322:Os05g0112000 | 27 | 4.3 | 12 | AF272860:Os05g0112000 | 27 | 4.3 | 13 | AK110772:Os03g0778000 | 26 | 7.3 | 14 | AK106095:Os01g0502400 | 26 | 7.3 | 15 | AK104357:Os01g0502400 | 26 | 7.3 | 16 | AK065149:Os01g0502400 | 26 | 7.3 | 17 | AK064417:Os10g0154600 | 26 | 7.3 | 18 | Os02g0776400:Os02g0776400 | 25 | 9.5 | 19 | AY347878:Os04g0611800 | 25 | 9.5 | 20 | AY347877:Os04g0611800 | 25 | 9.5 | 21 | AY347876:Os04g0611800 | 25 | 9.5 | 22 | AK070398:Os05g0230600 | 25 | 9.5 | 23 | AK070313:Os01g0260100 | 25 | 9.5 |
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>AK099541:Os05g0463700 | Length = 275 Score = 26.9 bits (58), Expect = 3.3 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%) Frame = +2 Query: 8 HISFW--GCGI*ICLFGD 55 HI +W GCG+ ICLF D Sbjct: 123 HILYWIIGCGVLICLFRD 140
>Os09g0301700:Os09g0301700 | Length = 695 Score = 26.6 bits (57), Expect = 4.3 Identities = 14/38 (36%), Positives = 16/38 (42%) Frame = +3 Query: 66 LQPWLLLSNIYWDEQANVPSPAAGDANQAGPCDVMLHP 179 L PWL L YW +P P + N DV L P Sbjct: 237 LPPWLCLKQSYWMISILIPGPRSPGMN----IDVYLQP 270
>AK107650:Os05g0112000 | Length = 450 Score = 26.6 bits (57), Expect = 4.3 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Frame = -1 Query: 317 NPLKAMAHAPHCTLCACTLSQLYTNHEVKLSSKQEPLGHGTGRRGKRMKHNVTR--SSLI 144 NP +P C C ++S+L +P R+ R HN++ SS Sbjct: 357 NPTTLTPPSPACPFCRGSISRLVVAQTRSACDPDKPSSLQLTRKRSRRSHNLSEGSSSFK 416 Query: 143 CIPSCWG 123 +PS G Sbjct: 417 GLPSAMG 423
>AK105930:Os05g0112000 | Length = 449 Score = 26.6 bits (57), Expect = 4.3 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Frame = -1 Query: 317 NPLKAMAHAPHCTLCACTLSQLYTNHEVKLSSKQEPLGHGTGRRGKRMKHNVTR--SSLI 144 NP +P C C ++S+L +P R+ R HN++ SS Sbjct: 356 NPTTLTPPSPACPFCRGSISRLVVAQTRSACDPDKPSSLQLTRKRSRRSHNLSEGSSSFK 415 Query: 143 CIPSCWG 123 +PS G Sbjct: 416 GLPSAMG 422
>AK105623:Os05g0112000 | Length = 450 Score = 26.6 bits (57), Expect = 4.3 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Frame = -1 Query: 317 NPLKAMAHAPHCTLCACTLSQLYTNHEVKLSSKQEPLGHGTGRRGKRMKHNVTR--SSLI 144 NP +P C C ++S+L +P R+ R HN++ SS Sbjct: 357 NPTTLTPPSPACPFCRGSISRLVVAQTRSACDPDKPSSLQLTRKRSRRSHNLSEGSSSFK 416 Query: 143 CIPSCWG 123 +PS G Sbjct: 417 GLPSAMG 423
>AK102925:Os05g0542900 | Length = 445 Score = 26.6 bits (57), Expect = 4.3 Identities = 10/40 (25%), Positives = 21/40 (52%) Frame = +2 Query: 188 FDQCHGPEVLACLITSLRDLYITETKYKHTKYNEVHVP*P 307 F+ C G V+ + + ++ ++T T+ H K N + + P Sbjct: 171 FEDCQGISVMGITLQNSQESHLTFTRCSHVKANYLRITSP 210
>AK102800:Os05g0112000 | Length = 450 Score = 26.6 bits (57), Expect = 4.3 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Frame = -1 Query: 317 NPLKAMAHAPHCTLCACTLSQLYTNHEVKLSSKQEPLGHGTGRRGKRMKHNVTR--SSLI 144 NP +P C C ++S+L +P R+ R HN++ SS Sbjct: 357 NPTTLTPPSPACPFCRGSISRLVVAQTRSACDPDKPSSLQLTRKRSRRSHNLSEGSSSFK 416 Query: 143 CIPSCWG 123 +PS G Sbjct: 417 GLPSAMG 423
>AK100237:Os10g0577700 | Length = 375 Score = 26.6 bits (57), Expect = 4.3 Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 1/38 (2%) Frame = +1 Query: 124 PQQLGMQIRLDLVTLCF-IRLPLRPVPWPRGSCLLDNF 234 P I L TLC R P RP PWPR LL F Sbjct: 12 PSSSSPSIPTHLATLCCCFRPPARP-PWPRSLLLLGAF 48
>AK066547:Os08g0356700 | Length = 546 Score = 26.6 bits (57), Expect = 4.3 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -1 Query: 323 QLNPLKAMAHAPHCTLCACTLSQLY-TNHEVKLSSKQEPLGHGTGRRGKRMKH 168 Q NP A +H T +SQL T +V+L S++ + HG G G+ KH Sbjct: 415 QSNPAAAGSHV---TAYCVFMSQLACTAADVELLSRRGVIVHGLGHHGEVAKH 464
>AK061718:Os10g0577700 | Length = 375 Score = 26.6 bits (57), Expect = 4.3 Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 1/38 (2%) Frame = +1 Query: 124 PQQLGMQIRLDLVTLCF-IRLPLRPVPWPRGSCLLDNF 234 P I L TLC R P RP PWPR LL F Sbjct: 12 PSSSSPSIPTHLATLCCCFRPPARP-PWPRSLLLLGAF 48
>AK059322:Os05g0112000 | Length = 345 Score = 26.6 bits (57), Expect = 4.3 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Frame = -1 Query: 317 NPLKAMAHAPHCTLCACTLSQLYTNHEVKLSSKQEPLGHGTGRRGKRMKHNVTR--SSLI 144 NP +P C C ++S+L +P R+ R HN++ SS Sbjct: 252 NPTTLTPPSPACPFCRGSISRLVVAQTRSACDPDKPSSLQLTRKRSRRSHNLSEGSSSFK 311 Query: 143 CIPSCWG 123 +PS G Sbjct: 312 GLPSAMG 318
>AF272860:Os05g0112000 | Length = 450 Score = 26.6 bits (57), Expect = 4.3 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Frame = -1 Query: 317 NPLKAMAHAPHCTLCACTLSQLYTNHEVKLSSKQEPLGHGTGRRGKRMKHNVTR--SSLI 144 NP +P C C ++S+L +P R+ R HN++ SS Sbjct: 357 NPTTLTPPSPACPFCRGSISRLVVAQTRSACDPDKPSSLQLTRKRSRRSHNLSEGSSSFK 416 Query: 143 CIPSCWG 123 +PS G Sbjct: 417 GLPSAMG 423
>AK110772:Os03g0778000 | Length = 495 Score = 25.8 bits (55), Expect = 7.3 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -1 Query: 248 TNHEVKLSSKQEPLGHGTGRRGKRMKHNVTRSSL 147 T+ ++K +Q P +GR G M+HN T SL Sbjct: 350 TSTQLKEPLQQYPYEQKSGREGPSMQHNGTSYSL 383
>AK106095:Os01g0502400 | Length = 392 Score = 25.8 bits (55), Expect = 7.3 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Frame = -1 Query: 260 SQLYTNHEVKLSSKQEPLGH--GTGRRGKRMKHNVTRSSLI 144 S L N E+KL +E LGH G R K +H R ++ Sbjct: 80 SVLDANREIKLQLMREVLGHYWPHGERNKVQRHREYRQRIL 120
>AK104357:Os01g0502400 | Length = 392 Score = 25.8 bits (55), Expect = 7.3 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Frame = -1 Query: 260 SQLYTNHEVKLSSKQEPLGH--GTGRRGKRMKHNVTRSSLI 144 S L N E+KL +E LGH G R K +H R ++ Sbjct: 80 SVLDANREIKLQLMREVLGHYWPHGERNKVQRHREYRQRIL 120
>AK065149:Os01g0502400 | Length = 392 Score = 25.8 bits (55), Expect = 7.3 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Frame = -1 Query: 260 SQLYTNHEVKLSSKQEPLGH--GTGRRGKRMKHNVTRSSLI 144 S L N E+KL +E LGH G R K +H R ++ Sbjct: 80 SVLDANREIKLQLMREVLGHYWPHGERNKVQRHREYRQRIL 120
>AK064417:Os10g0154600 | Length = 646 Score = 25.8 bits (55), Expect = 7.3 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = +3 Query: 267 TSTQSTMRCMCHSLQ 311 T+TQS +RC C SLQ Sbjct: 47 TTTQSAVRCACKSLQ 61
>Os02g0776400:Os02g0776400 | Length = 1315 Score = 25.4 bits (54), Expect = 9.5 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +1 Query: 70 NHGYYSPTSIGTNKPMFHPQQLG 138 NH +I +PMFHPQ +G Sbjct: 213 NHSVVPSQNIDYGQPMFHPQIVG 235
>AY347878:Os04g0611800 | Length = 756 Score = 25.4 bits (54), Expect = 9.5 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = -1 Query: 230 LSSKQEPLGHGTGRRGKRMKHNVTRSSLICIPSCWGWNIG 111 L ++Q+ GT G + +V S+L C+ + WN+G Sbjct: 52 LQNQQDDGSWGTRGFGVAVTRDVLSSTLACVLALKRWNVG 91
>AY347877:Os04g0611800 | Length = 756 Score = 25.4 bits (54), Expect = 9.5 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = -1 Query: 230 LSSKQEPLGHGTGRRGKRMKHNVTRSSLICIPSCWGWNIG 111 L ++Q+ GT G + +V S+L C+ + WN+G Sbjct: 52 LQNQQDDGSWGTRGFGVAVTRDVLSSTLACVLALKRWNVG 91
>AY347876:Os04g0611800 | Length = 756 Score = 25.4 bits (54), Expect = 9.5 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = -1 Query: 230 LSSKQEPLGHGTGRRGKRMKHNVTRSSLICIPSCWGWNIG 111 L ++Q+ GT G + +V S+L C+ + WN+G Sbjct: 52 LQNQQDDGSWGTRGFGVAVTRDVLSSTLACVLALKRWNVG 91
>AK070398:Os05g0230600 | Length = 989 Score = 25.4 bits (54), Expect = 9.5 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +2 Query: 212 VLACLITSLRDLYITETKYKHTKYNEVHV 298 VL L + DL++ E K + YN+VH+ Sbjct: 243 VLVALDETRSDLFLIELKGESISYNKVHI 271
>AK070313:Os01g0260100 | Length = 638 Score = 25.4 bits (54), Expect = 9.5 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = -1 Query: 278 LCACTLSQLYTNHEVKLSSKQEPLGHGTGRR 186 LC + +N+EVK + P+ HG RR Sbjct: 540 LCTPPFKEFSSNNEVKGHKNEHPVYHGRPRR 570 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 10,842,299 Number of extensions: 252466 Number of successful extensions: 642 Number of sequences better than 10.0: 23 Number of HSP's gapped: 642 Number of HSP's successfully gapped: 23 Length of query: 118 Length of database: 15,399,855 Length adjustment: 86 Effective length of query: 32 Effective length of database: 11,956,329 Effective search space: 382602528 Effective search space used: 382602528 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
