Clone Information

BLAST Search Result

Clone Name	FLbaf64c22
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	emb\|CT829643.1\| Oryza sativa (indica cultivar-group) cDNA clone:...	444	e-121
2	ref\|NM_001053435.1\| Oryza sativa (japonica cultivar-group) Os02g...	444	e-121
3	dbj\|AK067156.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	444	e-121
4	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	254	6e-64
5	dbj\|AP005630.3\| Oryza sativa (japonica cultivar-group) genomic D...	254	6e-64
6	ref\|NM_117373.3\| Arabidopsis thaliana DNA binding / transcriptio...	64	1e-06
7	gb\|AY133690.1\| Arabidopsis thaliana clone C103146 unknown protei...	64	1e-06
8	dbj\|AK221624.1\| Arabidopsis thaliana mRNA for hypothetical prote...	64	1e-06
9	emb\|AL161535.2\|ATCHRIV35 Arabidopsis thaliana DNA chromosome 4, ...	64	1e-06
10	emb\|AL079349.2\|ATF25G13 Arabidopsis thaliana DNA chromosome 4, B...	64	1e-06
11	emb\|BX828994.1\|CNS0A2ML Arabidopsis thaliana Full-length cDNA Co...	62	4e-06
12	ref\|XM_001145273.1\| PREDICTED: Pan troglodytes neurobeachin (NBE...	42	4.0
13	ref\|XR_012784.1\| PREDICTED: Macaca mulatta neurobeachin (NBEA), ...	42	4.0
14	ref\|NM_015678.3\| Homo sapiens neurobeachin (NBEA), mRNA	42	4.0
15	gb\|AC122385.2\| Mus musculus BAC clone RP24-72B22 from chromosome...	42	4.0
16	dbj\|AK127791.1\| Homo sapiens cDNA FLJ45892 fis, clone OCBBF30231...	42	4.0
17	dbj\|AK122888.1\| Homo sapiens cDNA FLJ16538 fis, clone OCBBF20332...	42	4.0
18	dbj\|AK091469.1\| Homo sapiens cDNA FLJ34150 fis, clone FCBBF30126...	42	4.0
19	gb\|AF467288.1\| Homo sapiens BCL8B protein (BCL8B) mRNA, complete...	42	4.0
20	ref\|XM_808060.1\| Trypanosoma cruzi strain CL Brener hypothetical...	42	4.0
21	gb\|AC106794.3\| Homo sapiens chromosome 5 clone RP11-419C19, comp...	42	4.0
22	dbj\|AP008214.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	4.0
23	emb\|AL139083.15\| Human DNA sequence from clone RP11-270C18 on ch...	42	4.0
24	gb\|AC134845.5\| Mus musculus BAC clone RP24-424K5 from chromosome...	42	4.0
25	emb\|CR382138.1\| Debaryomyces hansenii chromosome F of strain CBS...	42	4.0
26	emb\|AL137748.1\|HSM802363 Homo sapiens mRNA; cDNA DKFZp434G0511 (...	42	4.0
27	gb\|AC007394.4\| Homo sapiens BAC clone RP11-489G12 from 2, comple...	42	4.0
28	dbj\|AP005526.3\| Oryza sativa (japonica cultivar-group) genomic D...	42	4.0
29	dbj\|AP005506.3\| Oryza sativa (japonica cultivar-group) genomic D...	42	4.0
30	dbj\|AP006648.1\| Lotus japonicus genomic DNA, chromosome 1, clone...	42	4.0
31	gb\|AC109459.3\| Homo sapiens chromosome 5 clone RP11-260E4, compl...	42	4.0
32	gb\|AC154607.2\| Mus musculus BAC clone RP23-331D17 from chromosom...	42	4.0
33	emb\|BX640760.1\|HSM806841 Homo sapiens mRNA; cDNA DKFZp686I03263 ...	42	4.0
34	gb\|AF072371.1\|AF072371 Homo sapiens lysosomal trafficking regula...	42	4.0
35	dbj\|AB046764.1\| Homo sapiens mRNA for KIAA1544 protein, partial cds	42	4.0

>emb|CT829643.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA114K05, full
           insert sequence
          Length = 1102
 Score =  444 bits (224), Expect = e-121
 Identities = 466/549 (84%)
 Strand = Plus / Plus

                                                                       
Query: 166 tatggttagcttgaggagacgtcgactattgggtctttgttctggcaaagattcattgcc 225
           |||||||||||||||||| || || || ||||| ||||||||||| |||||||| || ||
Sbjct: 104 tatggttagcttgaggaggcgccggcttttggggctttgttctgggaaagattcgttacc 163

                                                                       
Query: 226 agttgatcttcctaagcctgttgagaatgnnnnnnntggggaagttgaacacgcaaatgt 285
            |||||| |||| ||||||  ||| ||||       || |||||||| |||| | ||  |
Sbjct: 164 ggttgattttccaaagcctagtgacaatgaaaattctgtggaagttgcacaccctaacat 223

                                                                       
Query: 286 caatccgctcagtgtgcacccactgcccttgaccaggacttctgacgtacttccagaatc 345
            || ||  ||||||||||||| |||||| |||| |  | |||||| |||||||  |||||
Sbjct: 224 aaagccattcagtgtgcacccgctgcccctgactaaaaattctgatgtacttctggaatc 283

                                                                       
Query: 346 ctcaaatggttccgactctctgaaggaagagaaaaaccaatactatccaggtaaggagat 405
            |||||||| || || ||| | ||||||||||||||||| ||||||||||| ||||| ||
Sbjct: 284 ttcaaatgggtctgattctttaaaggaagagaaaaaccattactatccaggcaaggaaat 343

                                                                       
Query: 406 taagcgcagaaagcgacatagaagaaagcagtatgtggaccaagagccatgcataatgag 465
            ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 344 caagcgcagaaaacgacatagaagaaagcagtatgtggaccaagaaccatgcataatgag 403

                                                                       
Query: 466 aggggtctatttcaaaaatatgaaatggcaagctgctataaaagttgacaagaaacaaat 525
           ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aggggtctacttcaaaaacatgaaatggcaagctgctataaaagttgacaagaaacaaat 463

                                                                       
Query: 526 tcacttgggtactgttggaacacaggatgaggcagcccggctatatgatagggctgcttt 585
            ||||| |||||||| || |||||||| || |||||||| ||||||||||||||||||||
Sbjct: 464 ccacttaggtactgtcgggacacaggaggaagcagcccgactatatgatagggctgcttt 523

                                                                       
Query: 586 tatgtgtggaagagagcccaattttgaactttctgaggaagagaaaaacgaactggttaa 645
           |||||||||||| ||||| || ||||||||||||||||||||||| || |||||    ||
Sbjct: 524 tatgtgtggaagggagccaaactttgaactttctgaggaagagaagaaagaactacagaa 583

                                                                       
Query: 646 gtacacatgggacgatttcctggcaatgacacgcaacaccataaccagcaaaaaacaaag 705
            ||||| ||| | || ||| |||  ||||| ||  |||||||||||||||||||||||||
Sbjct: 584 ttacacctggaaggacttcttggatatgactcgagacaccataaccagcaaaaaacaaag 643

                    
Query: 706 aaaggttgg 714
            || |||||
Sbjct: 644 gaaagttgg 652



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 752 gatactgagatggtcaatggtggcgggtcttcgaactcagatgatggagatg 803
           |||||||||||| ||||||||||||| || ||| |||| || ||||||||||
Sbjct: 702 gatactgagatgatcaatggtggcggctcatcgcactcggaagatggagatg 753



 Score = 50.1 bits (25), Expect = 0.017
 Identities = 44/49 (89%), Gaps = 1/49 (2%)
 Strand = Plus / Plus

                                                            
Query: 904 ctctcagtatttaaattcatgtgcataa-ggccctggtggtctgataaa 951
           |||||| || |||| ||||||||||||| ||||||| ||||||||||||
Sbjct: 866 ctctcaataattaatttcatgtgcataagggccctgatggtctgataaa 914

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>ref|NM_001053435.1| Oryza sativa (japonica cultivar-group) Os02g0499000 (Os02g0499000)
            mRNA, complete cds
          Length = 2697

 Score =  444 bits (224), Expect = e-121
 Identities = 466/549 (84%)
 Strand = Plus / Plus

                                                                        
Query: 166  tatggttagcttgaggagacgtcgactattgggtctttgttctggcaaagattcattgcc 225
            |||||||||||||||||| || || || ||||| ||||||||||| |||||||| || ||
Sbjct: 1700 tatggttagcttgaggaggcgccggcttttggggctttgttctgggaaagattcgttacc 1759

                                                                        
Query: 226  agttgatcttcctaagcctgttgagaatgnnnnnnntggggaagttgaacacgcaaatgt 285
             |||||| |||| ||||||  ||| ||||       || |||||||| |||| | ||  |
Sbjct: 1760 ggttgattttccaaagcctagtgacaatgaaaattctgtggaagttgcacaccctaacat 1819

                                                                        
Query: 286  caatccgctcagtgtgcacccactgcccttgaccaggacttctgacgtacttccagaatc 345
             || ||  ||||||||||||| |||||| |||| |  | |||||| |||||||  |||||
Sbjct: 1820 aaagccattcagtgtgcacccgctgcccctgactaaaaattctgatgtacttctggaatc 1879

                                                                        
Query: 346  ctcaaatggttccgactctctgaaggaagagaaaaaccaatactatccaggtaaggagat 405
             |||||||| || || ||| | ||||||||||||||||| ||||||||||| ||||| ||
Sbjct: 1880 ttcaaatgggtctgattctttaaaggaagagaaaaaccattactatccaggcaaggaaat 1939

                                                                        
Query: 406  taagcgcagaaagcgacatagaagaaagcagtatgtggaccaagagccatgcataatgag 465
             ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1940 caagcgcagaaaacgacatagaagaaagcagtatgtggaccaagaaccatgcataatgag 1999

                                                                        
Query: 466  aggggtctatttcaaaaatatgaaatggcaagctgctataaaagttgacaagaaacaaat 525
            ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2000 aggggtctacttcaaaaacatgaaatggcaagctgctataaaagttgacaagaaacaaat 2059

                                                                        
Query: 526  tcacttgggtactgttggaacacaggatgaggcagcccggctatatgatagggctgcttt 585
             ||||| |||||||| || |||||||| || |||||||| ||||||||||||||||||||
Sbjct: 2060 ccacttaggtactgtcgggacacaggaggaagcagcccgactatatgatagggctgcttt 2119

                                                                        
Query: 586  tatgtgtggaagagagcccaattttgaactttctgaggaagagaaaaacgaactggttaa 645
            |||||||||||| ||||| || ||||||||||||||||||||||| || |||||    ||
Sbjct: 2120 tatgtgtggaagggagccaaactttgaactttctgaggaagagaagaaagaactacagaa 2179

                                                                        
Query: 646  gtacacatgggacgatttcctggcaatgacacgcaacaccataaccagcaaaaaacaaag 705
             ||||| ||| | || ||| |||  ||||| ||  |||||||||||||||||||||||||
Sbjct: 2180 ttacacctggaaggacttcttggatatgactcgagacaccataaccagcaaaaaacaaag 2239

                     
Query: 706  aaaggttgg 714
             || |||||
Sbjct: 2240 gaaagttgg 2248



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                
Query: 752  gatactgagatggtcaatggtggcgggtcttcgaactcagatgatggagatg 803
            |||||||||||| ||||||||||||| || ||| |||| || ||||||||||
Sbjct: 2298 gatactgagatgatcaatggtggcggctcatcgcactcggaagatggagatg 2349



 Score = 50.1 bits (25), Expect = 0.017
 Identities = 44/49 (89%), Gaps = 1/49 (2%)
 Strand = Plus / Plus

                                                             
Query: 904  ctctcagtatttaaattcatgtgcataa-ggccctggtggtctgataaa 951
            |||||| || |||| ||||||||||||| ||||||| ||||||||||||
Sbjct: 2462 ctctcaataattaatttcatgtgcataagggccctgatggtctgataaa 2510



 Score = 48.1 bits (24), Expect = 0.065
 Identities = 35/38 (92%), Gaps = 3/38 (7%)
 Strand = Plus / Plus

                                                 
Query: 26  tctttgtatccc---tcgccaacttctcctaccaactt 60
           ||||||||||||   |||||||||||||||||||||||
Sbjct: 85  tctttgtatcccccgtcgccaacttctcctaccaactt 122

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>dbj|AK067156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098A10, full
            insert sequence
          Length = 2697

 Score =  444 bits (224), Expect = e-121
 Identities = 466/549 (84%)
 Strand = Plus / Plus

                                                                        
Query: 166  tatggttagcttgaggagacgtcgactattgggtctttgttctggcaaagattcattgcc 225
            |||||||||||||||||| || || || ||||| ||||||||||| |||||||| || ||
Sbjct: 1700 tatggttagcttgaggaggcgccggcttttggggctttgttctgggaaagattcgttacc 1759

                                                                        
Query: 226  agttgatcttcctaagcctgttgagaatgnnnnnnntggggaagttgaacacgcaaatgt 285
             |||||| |||| ||||||  ||| ||||       || |||||||| |||| | ||  |
Sbjct: 1760 ggttgattttccaaagcctagtgacaatgaaaattctgtggaagttgcacaccctaacat 1819

                                                                        
Query: 286  caatccgctcagtgtgcacccactgcccttgaccaggacttctgacgtacttccagaatc 345
             || ||  ||||||||||||| |||||| |||| |  | |||||| |||||||  |||||
Sbjct: 1820 aaagccattcagtgtgcacccgctgcccctgactaaaaattctgatgtacttctggaatc 1879

                                                                        
Query: 346  ctcaaatggttccgactctctgaaggaagagaaaaaccaatactatccaggtaaggagat 405
             |||||||| || || ||| | ||||||||||||||||| ||||||||||| ||||| ||
Sbjct: 1880 ttcaaatgggtctgattctttaaaggaagagaaaaaccattactatccaggcaaggaaat 1939

                                                                        
Query: 406  taagcgcagaaagcgacatagaagaaagcagtatgtggaccaagagccatgcataatgag 465
             ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1940 caagcgcagaaaacgacatagaagaaagcagtatgtggaccaagaaccatgcataatgag 1999

                                                                        
Query: 466  aggggtctatttcaaaaatatgaaatggcaagctgctataaaagttgacaagaaacaaat 525
            ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2000 aggggtctacttcaaaaacatgaaatggcaagctgctataaaagttgacaagaaacaaat 2059

                                                                        
Query: 526  tcacttgggtactgttggaacacaggatgaggcagcccggctatatgatagggctgcttt 585
             ||||| |||||||| || |||||||| || |||||||| ||||||||||||||||||||
Sbjct: 2060 ccacttaggtactgtcgggacacaggaggaagcagcccgactatatgatagggctgcttt 2119

                                                                        
Query: 586  tatgtgtggaagagagcccaattttgaactttctgaggaagagaaaaacgaactggttaa 645
            |||||||||||| ||||| || ||||||||||||||||||||||| || |||||    ||
Sbjct: 2120 tatgtgtggaagggagccaaactttgaactttctgaggaagagaagaaagaactacagaa 2179

                                                                        
Query: 646  gtacacatgggacgatttcctggcaatgacacgcaacaccataaccagcaaaaaacaaag 705
             ||||| ||| | || ||| |||  ||||| ||  |||||||||||||||||||||||||
Sbjct: 2180 ttacacctggaaggacttcttggatatgactcgagacaccataaccagcaaaaaacaaag 2239

                     
Query: 706  aaaggttgg 714
             || |||||
Sbjct: 2240 gaaagttgg 2248



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                
Query: 752  gatactgagatggtcaatggtggcgggtcttcgaactcagatgatggagatg 803
            |||||||||||| ||||||||||||| || ||| |||| || ||||||||||
Sbjct: 2298 gatactgagatgatcaatggtggcggctcatcgcactcggaagatggagatg 2349



 Score = 50.1 bits (25), Expect = 0.017
 Identities = 44/49 (89%), Gaps = 1/49 (2%)
 Strand = Plus / Plus

                                                             
Query: 904  ctctcagtatttaaattcatgtgcataa-ggccctggtggtctgataaa 951
            |||||| || |||| ||||||||||||| ||||||| ||||||||||||
Sbjct: 2462 ctctcaataattaatttcatgtgcataagggccctgatggtctgataaa 2510



 Score = 48.1 bits (24), Expect = 0.065
 Identities = 35/38 (92%), Gaps = 3/38 (7%)
 Strand = Plus / Plus

                                                 
Query: 26  tctttgtatccc---tcgccaacttctcctaccaactt 60
           ||||||||||||   |||||||||||||||||||||||
Sbjct: 86  tctttgtatcccccgtcgccaacttctcctaccaactt 123

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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score =  254 bits (128), Expect = 6e-64
 Identities = 167/180 (92%)
 Strand = Plus / Plus

                                                                            
Query: 398      aaggagattaagcgcagaaagcgacatagaagaaagcagtatgtggaccaagagccatgc 457
                ||||| || ||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 17680576 aaggaaatcaagcgcagaaaacgacatagaagaaagcagtatgtggaccaagaaccatgc 17680635

                                                                            
Query: 458      ataatgagaggggtctatttcaaaaatatgaaatggcaagctgctataaaagttgacaag 517
                ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 17680636 ataatgagaggggtctacttcaaaaacatgaaatggcaagctgctataaaagttgacaag 17680695

                                                                            
Query: 518      aaacaaattcacttgggtactgttggaacacaggatgaggcagcccggctatatgatagg 577
                |||||||| ||||| |||||||| || |||||||| || |||||||| ||||||||||||
Sbjct: 17680696 aaacaaatccacttaggtactgtcgggacacaggaggaagcagcccgactatatgatagg 17680755



 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                            
Query: 575      agggctgcttttatgtgtggaagagagcccaattttgaactttctgaggaagagaaaaac 634
                ||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| || 
Sbjct: 17681288 agggctgcttttatgtgtggaagggagccaaactttgaactttctgaggaagagaagaaa 17681347

                     
Query: 635      gaact 639
                |||||
Sbjct: 17681348 gaact 17681352



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                            
Query: 325      ttctgacgtacttccagaatcctcaaatggttccgactctctgaaggaagagaaaaacca 384
                |||||| |||||||  ||||| |||||||| || || ||| | |||||||||||||||||
Sbjct: 17679911 ttctgatgtacttctggaatcttcaaatgggtctgattctttaaaggaagagaaaaacca 17679970

                             
Query: 385      atactatccaggt 397
                 ||||||||||||
Sbjct: 17679971 ttactatccaggt 17679983



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                    
Query: 752      gatactgagatggtcaatggtggcgggtcttcgaactcagatgatggagatg 803
                |||||||||||| ||||||||||||| || ||| |||| || ||||||||||
Sbjct: 17681606 gatactgagatgatcaatggtggcggctcatcgcactcggaagatggagatg 17681657



 Score = 50.1 bits (25), Expect = 0.017
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                             
Query: 166      tatggttagcttgaggagacgtcgactattgggtctttgttctgg 210
                |||||||||||||||||| || || || ||||| |||||||||||
Sbjct: 17676774 tatggttagcttgaggaggcgccggcttttggggctttgttctgg 17676818



 Score = 50.1 bits (25), Expect = 0.017
 Identities = 44/49 (89%), Gaps = 1/49 (2%)
 Strand = Plus / Plus

                                                                 
Query: 904      ctctcagtatttaaattcatgtgcataa-ggccctggtggtctgataaa 951
                |||||| || |||| ||||||||||||| ||||||| ||||||||||||
Sbjct: 17681770 ctctcaataattaatttcatgtgcataagggccctgatggtctgataaa 17681818



 Score = 48.1 bits (24), Expect = 0.065
 Identities = 35/38 (92%), Gaps = 3/38 (7%)
 Strand = Plus / Plus

                                                      
Query: 26       tctttgtatccc---tcgccaacttctcctaccaactt 60
                ||||||||||||   |||||||||||||||||||||||
Sbjct: 17674995 tctttgtatcccccgtcgccaacttctcctaccaactt 17675032

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>dbj|AP005630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0021C10
          Length = 119527

 Score =  254 bits (128), Expect = 6e-64
 Identities = 167/180 (92%)
 Strand = Plus / Plus

                                                                         
Query: 398   aaggagattaagcgcagaaagcgacatagaagaaagcagtatgtggaccaagagccatgc 457
             ||||| || ||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 36590 aaggaaatcaagcgcagaaaacgacatagaagaaagcagtatgtggaccaagaaccatgc 36649

                                                                         
Query: 458   ataatgagaggggtctatttcaaaaatatgaaatggcaagctgctataaaagttgacaag 517
             ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 36650 ataatgagaggggtctacttcaaaaacatgaaatggcaagctgctataaaagttgacaag 36709

                                                                         
Query: 518   aaacaaattcacttgggtactgttggaacacaggatgaggcagcccggctatatgatagg 577
             |||||||| ||||| |||||||| || |||||||| || |||||||| ||||||||||||
Sbjct: 36710 aaacaaatccacttaggtactgtcgggacacaggaggaagcagcccgactatatgatagg 36769



 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                         
Query: 575   agggctgcttttatgtgtggaagagagcccaattttgaactttctgaggaagagaaaaac 634
             ||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| || 
Sbjct: 37302 agggctgcttttatgtgtggaagggagccaaactttgaactttctgaggaagagaagaaa 37361

                  
Query: 635   gaact 639
             |||||
Sbjct: 37362 gaact 37366



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                         
Query: 325   ttctgacgtacttccagaatcctcaaatggttccgactctctgaaggaagagaaaaacca 384
             |||||| |||||||  ||||| |||||||| || || ||| | |||||||||||||||||
Sbjct: 35925 ttctgatgtacttctggaatcttcaaatgggtctgattctttaaaggaagagaaaaacca 35984

                          
Query: 385   atactatccaggt 397
              ||||||||||||
Sbjct: 35985 ttactatccaggt 35997



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 752   gatactgagatggtcaatggtggcgggtcttcgaactcagatgatggagatg 803
             |||||||||||| ||||||||||||| || ||| |||| || ||||||||||
Sbjct: 37620 gatactgagatgatcaatggtggcggctcatcgcactcggaagatggagatg 37671



 Score = 50.1 bits (25), Expect = 0.017
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                          
Query: 166   tatggttagcttgaggagacgtcgactattgggtctttgttctgg 210
             |||||||||||||||||| || || || ||||| |||||||||||
Sbjct: 32788 tatggttagcttgaggaggcgccggcttttggggctttgttctgg 32832



 Score = 50.1 bits (25), Expect = 0.017
 Identities = 44/49 (89%), Gaps = 1/49 (2%)
 Strand = Plus / Plus

                                                              
Query: 904   ctctcagtatttaaattcatgtgcataa-ggccctggtggtctgataaa 951
             |||||| || |||| ||||||||||||| ||||||| ||||||||||||
Sbjct: 37784 ctctcaataattaatttcatgtgcataagggccctgatggtctgataaa 37832



 Score = 48.1 bits (24), Expect = 0.065
 Identities = 35/38 (92%), Gaps = 3/38 (7%)
 Strand = Plus / Plus

                                                   
Query: 26    tctttgtatccc---tcgccaacttctcctaccaactt 60
             ||||||||||||   |||||||||||||||||||||||
Sbjct: 31009 tctttgtatcccccgtcgccaacttctcctaccaactt 31046

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>ref|NM_117373.3| Arabidopsis thaliana DNA binding / transcription factor (AT4G13040)
           mRNA, complete cds
          Length = 861

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 74/88 (84%)
 Strand = Plus / Plus

                                                                       
Query: 444 accaagagccatgcataatgagaggggtctatttcaaaaatatgaaatggcaagctgcta 503
           ||||||| |||||  | |||||||| ||||| | |||||| |||||||||||||| || |
Sbjct: 475 accaagaaccatgtttgatgagaggagtctactacaaaaacatgaaatggcaagccgcca 534

                                       
Query: 504 taaaagttgacaagaaacaaattcactt 531
           | ||||| || ||||||||||| |||||
Sbjct: 535 ttaaagtcgagaagaaacaaatccactt 562

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>gb|AY133690.1| Arabidopsis thaliana clone C103146 unknown protein (At4g13040)
           mRNA, complete cds
          Length = 622

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 74/88 (84%)
 Strand = Plus / Plus

                                                                       
Query: 444 accaagagccatgcataatgagaggggtctatttcaaaaatatgaaatggcaagctgcta 503
           ||||||| |||||  | |||||||| ||||| | |||||| |||||||||||||| || |
Sbjct: 242 accaagaaccatgtttgatgagaggagtctactacaaaaacatgaaatggcaagccgcca 301

                                       
Query: 504 taaaagttgacaagaaacaaattcactt 531
           | ||||| || ||||||||||| |||||
Sbjct: 302 ttaaagtcgagaagaaacaaatccactt 329

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>dbj|AK221624.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL07-94-D09
          Length = 839

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 74/88 (84%)
 Strand = Plus / Plus

                                                                       
Query: 444 accaagagccatgcataatgagaggggtctatttcaaaaatatgaaatggcaagctgcta 503
           ||||||| |||||  | |||||||| ||||| | |||||| |||||||||||||| || |
Sbjct: 403 accaagaaccatgtttgatgagaggagtctactacaaaaacatgaaatggcaagccgcca 462

                                       
Query: 504 taaaagttgacaagaaacaaattcactt 531
           | ||||| || ||||||||||| |||||
Sbjct: 463 ttaaagtcgagaagaaacaaatccactt 490

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>emb|AL161535.2|ATCHRIV35 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 35
          Length = 199280

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 74/88 (84%)
 Strand = Plus / Plus

                                                                         
Query: 444   accaagagccatgcataatgagaggggtctatttcaaaaatatgaaatggcaagctgcta 503
             ||||||| |||||  | |||||||| ||||| | |||||| |||||||||||||| || |
Sbjct: 95838 accaagaaccatgtttgatgagaggagtctactacaaaaacatgaaatggcaagccgcca 95897

                                         
Query: 504   taaaagttgacaagaaacaaattcactt 531
             | ||||| || ||||||||||| |||||
Sbjct: 95898 ttaaagtcgagaagaaacaaatccactt 95925

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>emb|AL079349.2|ATF25G13 Arabidopsis thaliana DNA chromosome 4, BAC clone F25G13, partial
             sequence (ESSA project)
          Length = 95009

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 74/88 (84%)
 Strand = Plus / Plus

                                                                         
Query: 444   accaagagccatgcataatgagaggggtctatttcaaaaatatgaaatggcaagctgcta 503
             ||||||| |||||  | |||||||| ||||| | |||||| |||||||||||||| || |
Sbjct: 66464 accaagaaccatgtttgatgagaggagtctactacaaaaacatgaaatggcaagccgcca 66523

                                         
Query: 504   taaaagttgacaagaaacaaattcactt 531
             | ||||| || ||||||||||| |||||
Sbjct: 66524 ttaaagtcgagaagaaacaaatccactt 66551

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>emb|BX828994.1|CNS0A2ML Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL58ZF04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 862

 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                       
Query: 444 accaagagccatgcataatgagaggggtctatttcaaaaatatgaaatggcaagctgcta 503
           ||||||| |||||  | |||||||| ||||| | |||||| |||||||||||||| || |
Sbjct: 475 accaagaaccatgtttgatgagaggagtctactacaaaaacatgaaatggcaagccgcca 534

                                              
Query: 504 taaaagttgacaagaaacaaattcacttgggtact 538
           | ||||| || |||||||||||  |||| ||||||
Sbjct: 535 ttaaagtcgagaagaaacaaatctacttaggtact 569

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>ref|XM_001145273.1| PREDICTED: Pan troglodytes neurobeachin (NBEA), mRNA
          Length = 10886

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 507  aagttgacaagaaacaaattcactt 531
            |||||| ||||||||||||||||||
Sbjct: 7794 aagttggcaagaaacaaattcactt 7770

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>ref|XR_012784.1| PREDICTED: Macaca mulatta neurobeachin (NBEA), mRNA
          Length = 10530

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 507  aagttgacaagaaacaaattcactt 531
            |||||| ||||||||||||||||||
Sbjct: 7423 aagttggcaagaaacaaattcactt 7399

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>ref|NM_015678.3| Homo sapiens neurobeachin (NBEA), mRNA
          Length = 10812

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 507  aagttgacaagaaacaaattcactt 531
            |||||| ||||||||||||||||||
Sbjct: 7688 aagttggcaagaaacaaattcactt 7664

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>gb|AC122385.2| Mus musculus BAC clone RP24-72B22 from chromosome 1, complete sequence
          Length = 178821

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 688    aaccagcaaaaaacaaagaaa 708
              |||||||||||||||||||||
Sbjct: 134881 aaccagcaaaaaacaaagaaa 134861

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>dbj|AK127791.1| Homo sapiens cDNA FLJ45892 fis, clone OCBBF3023175, moderately
            similar to Mus musculus LPS-responsive beige-like anchor
            (Lrba)
          Length = 5124

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 507  aagttgacaagaaacaaattcactt 531
            |||||| ||||||||||||||||||
Sbjct: 3367 aagttggcaagaaacaaattcactt 3343

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>dbj|AK122888.1| Homo sapiens cDNA FLJ16538 fis, clone OCBBF2033295, moderately
            similar to Mus musculus LPS-responsive beige-like anchor
            (Lrba)
          Length = 4284

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 507  aagttgacaagaaacaaattcactt 531
            |||||| ||||||||||||||||||
Sbjct: 2529 aagttggcaagaaacaaattcactt 2505

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>dbj|AK091469.1| Homo sapiens cDNA FLJ34150 fis, clone FCBBF3012667, moderately
            similar to Mus musculus LAB300 (Lab300) mRNA
          Length = 3932

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 507  aagttgacaagaaacaaattcactt 531
            |||||| ||||||||||||||||||
Sbjct: 2175 aagttggcaagaaacaaattcactt 2151

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>gb|AF467288.1| Homo sapiens BCL8B protein (BCL8B) mRNA, complete cds
          Length = 10812

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 507  aagttgacaagaaacaaattcactt 531
            |||||| ||||||||||||||||||
Sbjct: 7688 aagttggcaagaaacaaattcactt 7664

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>ref|XM_808060.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508723.70) partial mRNA
          Length = 6603

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 646 gtacacatgggacgatttcct 666
           |||||||||||||||||||||
Sbjct: 438 gtacacatgggacgatttcct 458

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>gb|AC106794.3| Homo sapiens chromosome 5 clone RP11-419C19, complete sequence
          Length = 200581

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1025  tcaattatagaaatgaattta 1045
             |||||||||||||||||||||
Sbjct: 23304 tcaattatagaaatgaattta 23324

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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 972     ctcagttcaaattggagatgg 992
               |||||||||||||||||||||
Sbjct: 2546100 ctcagttcaaattggagatgg 2546080

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>emb|AL139083.15| Human DNA sequence from clone RP11-270C18 on chromosome 13 Contains the
             3' end of the NBEA gene for neurobeachin (BCL8B FLJ10197
             KIAA1544) and a novel gene, complete sequence
          Length = 162081

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 507   aagttgacaagaaacaaattcactt 531
             |||||| ||||||||||||||||||
Sbjct: 19354 aagttggcaagaaacaaattcactt 19330

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>gb|AC134845.5| Mus musculus BAC clone RP24-424K5 from chromosome 1, complete
           sequence
          Length = 194449

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 688 aaccagcaaaaaacaaagaaa 708
           |||||||||||||||||||||
Sbjct: 412 aaccagcaaaaaacaaagaaa 392

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>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
              hansenii
          Length = 2336804

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 689    accagcaaaaaacaaagaaag 709
              |||||||||||||||||||||
Sbjct: 262578 accagcaaaaaacaaagaaag 262598

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>emb|AL137748.1|HSM802363 Homo sapiens mRNA; cDNA DKFZp434G0511 (from clone DKFZp434G0511)
          Length = 3809

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 507 aagttgacaagaaacaaattcactt 531
           |||||| ||||||||||||||||||
Sbjct: 628 aagttggcaagaaacaaattcactt 604

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>gb|AC007394.4| Homo sapiens BAC clone RP11-489G12 from 2, complete sequence
          Length = 171468

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 368    aaggaagagaaaaaccaatac 388
              |||||||||||||||||||||
Sbjct: 157357 aaggaagagaaaaaccaatac 157337

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>dbj|AP005526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0571B09
          Length = 147382

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 972   ctcagttcaaattggagatgg 992
             |||||||||||||||||||||
Sbjct: 60457 ctcagttcaaattggagatgg 60437

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>dbj|AP005506.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0665F09
          Length = 147102

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 972    ctcagttcaaattggagatgg 992
              |||||||||||||||||||||
Sbjct: 107729 ctcagttcaaattggagatgg 107709

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>dbj|AP006648.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT29O08, TM0320a,
             complete sequence
          Length = 76227

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 679   caacaccataaccagcaaaaaacaa 703
             |||||||||||||| ||||||||||
Sbjct: 16142 caacaccataaccaacaaaaaacaa 16166

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>gb|AC109459.3| Homo sapiens chromosome 5 clone RP11-260E4, complete sequence
          Length = 137309

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1025  tcaattatagaaatgaattta 1045
             |||||||||||||||||||||
Sbjct: 85775 tcaattatagaaatgaattta 85795

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>gb|AC154607.2| Mus musculus BAC clone RP23-331D17 from chromosome 16, complete
             sequence
          Length = 202496

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1027  aattatagaaatgaatttagc 1047
             |||||||||||||||||||||
Sbjct: 84814 aattatagaaatgaatttagc 84834

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>emb|BX640760.1|HSM806841 Homo sapiens mRNA; cDNA DKFZp686I03263 (from clone DKFZp686I03263)
          Length = 5125

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 507  aagttgacaagaaacaaattcactt 531
            |||||| ||||||||||||||||||
Sbjct: 3346 aagttggcaagaaacaaattcactt 3322

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>gb|AF072371.1|AF072371 Homo sapiens lysosomal trafficking regulator 2 mRNA, partial cds
          Length = 1979

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 507 aagttgacaagaaacaaattcactt 531
           |||||| ||||||||||||||||||
Sbjct: 203 aagttggcaagaaacaaattcactt 179

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>dbj|AB046764.1| Homo sapiens mRNA for KIAA1544 protein, partial cds
          Length = 4831

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 507  aagttgacaagaaacaaattcactt 531
            |||||| ||||||||||||||||||
Sbjct: 1728 aagttggcaagaaacaaattcactt 1704


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 196,028,749
Number of extensions: 11238879
Number of successful extensions: 233868
Number of sequences better than 10.0: 35
Number of HSP's gapped: 233860
Number of HSP's successfully gapped: 61
Length of query: 1064
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1041
Effective length of database: 18,503,978,556
Effective search space: 19262641676796
Effective search space used: 19262641676796
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result