ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf61k22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK111502:Os01g0612000 384 e-106
2AK111685:Os05g0224800 31 2.1
3AK067302:Os05g0133900 31 2.1
4AK063482:Os05g0133900 31 2.1
5Os11g0641200:Os11g0641200 31 2.7

>AK111502:Os01g0612000 |
          Length = 249
 Score =  384 bits (986), Expect = e-106
 Identities = 197/274 (71%), Positives = 211/274 (77%)
 Frame = +2

Query: 29  METPSPWRVLEFYSGIGGMRYSLASSGVRAEVVEAFDINDVANDVYEHNFAHRPCQGNIQ 208
           MET  PW+VLEFYSGIGGMRYSLA+SG RAEVVEAFDINDVANDVYE NF HRP QGNIQ
Sbjct: 1   METAVPWKVLEFYSGIGGMRYSLAASGARAEVVEAFDINDVANDVYELNFGHRPYQGNIQ 60

Query: 209 TLAAGDLDKYKAHAWLLSPPCQPYTRQGLQKHSADARAFSFIKILSLMQNMSFPPQMLFV 388
           TL A DLDKYKA AWLLSPPCQPYTRQGLQKHSADARAFSFIKIL+LM+NM FPPQMLFV
Sbjct: 61  TLTASDLDKYKAQAWLLSPPCQPYTRQGLQKHSADARAFSFIKILNLMKNMCFPPQMLFV 120

Query: 389 ENVVGFEVSDTHDQLLGVLSTLNFNTQEFILSPLQFGVPYSRPRYFCLAKQEPMCFPNPS 568
           ENVVGFEVSDTHDQL+ VLS LNFNTQEFILSPLQFG+PYSRPRYFCLAK+EP+ F NPS
Sbjct: 121 ENVVGFEVSDTHDQLIEVLSDLNFNTQEFILSPLQFGIPYSRPRYFCLAKREPVSFQNPS 180

Query: 569 VNEKLLRTPTFLTLNATTAQNSYDQNEDDLEVVCNPIRNFLEAQSIVIGDGECSAIISDF 748
            N KLLRTPTFLTL      N  +Q                          + S  ISD 
Sbjct: 181 DNSKLLRTPTFLTL-VRAGHNRCNQ--------------------------DSSGTISDI 213

Query: 749 KEAHGCTPSETASQDYTVPLSLIERWGNAMDIVY 850
             + GCTPS   SQDY VPL+LIERWG+AM I +
Sbjct: 214 NGSDGCTPSGIISQDYVVPLNLIERWGSAMGIFF 247



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>AK111685:Os05g0224800 |
          Length = 312

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 995  RFFTPREVANLHSFPSSFRFPDHIGLRQQYAMLGNSLSVAV 1117
            R  T RE A L  FP ++RF   +  + +Y  +GN+++V V
Sbjct: 236  RLLTIRESARLQGFPDNYRFRGTV--KDRYRQIGNAVAVPV 274



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>AK067302:Os05g0133900 |
          Length = 667

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = +2

Query: 38  PSPWRVLEFYSGIGGMRYSLASSGVRAEVVEAFDINDVANDVYEHNFAHRPCQGNIQTL 214
           P   RVL  YSGIGG   +L   G+  + V + D +D    +    +++   +G ++ +
Sbjct: 539 PDGLRVLSIYSGIGGAAIALHRLGIPLQCVVSVDQSDTNRKILRRWWSNTEQKGQLRQI 597



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>AK063482:Os05g0133900 |
          Length = 680

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = +2

Query: 38  PSPWRVLEFYSGIGGMRYSLASSGVRAEVVEAFDINDVANDVYEHNFAHRPCQGNIQTL 214
           P   RVL  YSGIGG   +L   G+  + V + D +D    +    +++   +G ++ +
Sbjct: 539 PDGLRVLSIYSGIGGAAIALHRLGIPLQCVVSVDQSDTNRKILRRWWSNTEQKGQLRQI 597



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>Os11g0641200:Os11g0641200 |
          Length = 614

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
 Frame = +1

Query: 1015 GRQFAFFSLEFPFSGSHRPQTAVCHAG**S*CSGCGSFAALSVCRGIEKFSIIWQVIFT- 1191
            G   + F L+ P S +   +T +   G  S   GC         +G+EK S++W    T 
Sbjct: 125  GAHMSPFPLDQPGSDNETERTCLTDVGLTSLARGC---------KGLEKLSLVWCSSITS 175

Query: 1192 --LVRHLIFVKNLAILELQFTELED 1260
              LVR     KNL+ L+LQ   + D
Sbjct: 176  TGLVRISENCKNLSSLDLQACYIGD 200


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 45,891,394
Number of extensions: 1053657
Number of successful extensions: 2325
Number of sequences better than 10.0: 5
Number of HSP's gapped: 2325
Number of HSP's successfully gapped: 6
Length of query: 513
Length of database: 15,399,855
Length adjustment: 105
Effective length of query: 408
Effective length of database: 11,195,550
Effective search space: 4567784400
Effective search space used: 4567784400
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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