| Clone Name | FLbaf61k22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009601.1| Triticum aestivum clone wre1n.pk0079.c6:fis, full insert mRNA sequence Length = 1462 Score = 1221 bits (616), Expect = 0.0 Identities = 781/835 (93%), Gaps = 7/835 (0%) Strand = Plus / Plus Query: 408 aggtgtctgatacacatgaccagttgctaggggtcctttcaactctcaatttcaacacac 467 |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 522 aggtatctgatacacatgaccagttgctagcggtcctttcaactctcagtttcaacacac 581 Query: 468 aagaattcatcctaagccccttgcagtttggtgtcccatattctagaccgcgctacttct 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 582 aagaattcatcctaagccccttgcagtttggtgtcccatattctagaccgcgctacttct 641 Query: 528 gtttggcgaaacaggaacctatgtgttttccaaatccatcagtcaatgagaagctgctta 587 ||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 642 gtttggcaaaacaggaatctatgtgttttccaaatccatcagtcaatgacaagctgctta 701 Query: 588 ggacacctacattcctaacattgaacgctacgacagctcagaatagctatgaccagaatg 647 |||||||||||| ||||||||||||| |||||| | |||||||||||||||||||||||| Sbjct: 702 ggacacctacatgcctaacattgaacactacgagaactcagaatagctatgaccagaatg 761 Query: 648 aagatgatctggaagtagtatgtaatccaataagaaacttccttgaagcacaaagtattg 707 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 762 aagatgatctggaagtagtatgtaatccaataagaaacttccttgaagcacagagtattg 821 Query: 708 ttattggagacggggagtgttcagccatcatctctgactttaaggaggctcatggatgca 767 |||| ||| | ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 822 ------gagataaggaatcttcagccatcatctctgactttaaggaggctgatggatgca 875 Query: 768 ctccgagtgaaactgcttcacaggactacacagttccgctaagcttgattgaacggtggg 827 |||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 876 ctccgattgaaactgcttcacatgactacacagttccactaagcttgattgaacggtggg 935 Query: 828 gaaatgctatggatattgtataccctgaatcaaaacggtgctgctgttttactaaaagtt 887 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 936 gaaatgctatggatattgtataccctgaatcaaaacggtgctgctgttttactaaaagtt 995 Query: 888 attatcgctatgtgaagggcacaggctctgtactggctacatctaaaaacgtcagaccag 947 |||||||||||||||||||||||||||||||||||| ||||||||||| | ||| ||||| Sbjct: 996 attatcgctatgtgaagggcacaggctctgtactggttacatctaaaagcctcaaaccag 1055 Query: 948 ttccaaaagagaaccttgaaatttcttcattaaatgagttgggtctacgttttttcacac 1007 |||||||||||||||||||||| |||||| | | ||||||||||||||| |||||||| | Sbjct: 1056 ttccaaaagagaaccttgaaatgtcttcactgagtgagttgggtctacggtttttcaccc 1115 Query: 1008 ctcgagaggtcgccaatttgcattcttttccctcgagtttccgttttccggatcacatag 1067 ||||||||||||| ||||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 1116 ctcgagaggtcgctaatttgcattcatttcccccgagtttccgttttccggatcagataa 1175 Query: 1068 gcctcagacagcagtatgccatgctgggtaatagtcttagtgtagcggttgtggctcctt 1127 |||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 1176 gcctcagacaacagtatgccatgctgggtaatagtctgagcatagcggttgtggctcctt 1235 Query: 1128 tgctgcgctatctgtttgccggggcatagagaagttctcaatcatttggcaggtgatatt 1187 || || ||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 1236 tgttgtgctatctgtttgccgagacatagacaagttctcaatcatttggcaggtgatatt 1295 Query: 1188 caccttggtgcgccatctgatatttgtcaaaaatcttgccatacttgagttgcaa 1242 |||||||| |||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 1296 caccttggcccgccatctgatatttgtc-aaaatcttgccacacttgagttgcaa 1349 Score = 607 bits (306), Expect = e-170 Identities = 381/406 (93%), Gaps = 5/406 (1%) Strand = Plus / Plus Query: 6 ccgcctcgcgatcaccgaaggcaatggagacgccgtctccatggagggtcctcgagttct 65 ||||| |||||| |||| || ||||||||||||| | |||||||||||||||||||||| Sbjct: 46 ccgccgcgcgataaccggagttaatggagacgccgcccccatggagggtcctcgagttct 105 Query: 66 acagcggtatcggcggcatgcggtactccctagcatcgtcgggcgttcgcgcggaggtgg 125 ||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||| Sbjct: 106 acagcggtatcggcggcatgcggtactcccttgcgtcgtcgggcgttcgagcggaggtgg 165 Query: 126 tggaggcctttgacatcaacgacgtcgccaacgacgtatacgagcacaacttcgcccacc 185 ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 166 tggaggcctttgacatcaacgacgtcgccaacgacgtctacgagcacaacttcggccacc 225 Query: 186 gcccctgccagggaaacattcaaacactcgctgctggtgatctagacaagtacaaggcac 245 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 226 gcccctgccagggaaacattcaaacactcactgctggtgatctagacaagtacaaggcac 285 Query: 246 atgcatggctcctttctcctccatgtcaaccatacacacggcaaggacttcagaagcact 305 |||||||||||||||||||||||||||||||||| |||| ||||||||||| || | Sbjct: 286 atgcatggctcctttctcctccatgtcaaccatatacac-----ggacttcagaaacatt 340 Query: 306 cagctgatgcccgggccttttcatttataaagattttaagccttatgcaaaacatgagct 365 |||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 341 cagctgatgctcgggcattttcatttataaagattttaaaccttatgcaaaacatgagct 400 Query: 366 ttcctccacaaatgttatttgtggagaatgttgtcggattcgaggt 411 ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 401 ttcctccacaaatgttatttgtggaaaatgttgtcggattcgaggt 446
>ref|NM_001050088.1| Oryza sativa (japonica cultivar-group) Os01g0612000 (Os01g0612000) mRNA, complete cds Length = 1738 Score = 585 bits (295), Expect = e-163 Identities = 499/567 (88%) Strand = Plus / Plus Query: 44 ccatggagggtcctcgagttctacagcggtatcggcggcatgcggtactccctagcatcg 103 ||||||| |||||||||||||| ||||| |||||||| ||| ||||||| || || || Sbjct: 96 ccatggaaagtcctcgagttctatagcggcatcggcgggatgaggtactcgctggcggcg 155 Query: 104 tcgggcgttcgcgcggaggtggtggaggcctttgacatcaacgacgtcgccaacgacgta 163 ||||||| || || ||||||||||||||||| |||||||||||||| |||||||| || Sbjct: 156 tcgggcgcgcgggccgaggtggtggaggccttcgacatcaacgacgttgccaacgatgtc 215 Query: 164 tacgagcacaacttcgcccaccgcccctgccagggaaacattcaaacactcgctgctggt 223 ||||||| |||||||| ||||||||| | |||||||||||||||||||||| ||||| || Sbjct: 216 tacgagctcaacttcggccaccgcccataccagggaaacattcaaacactcactgctagt 275 Query: 224 gatctagacaagtacaaggcacatgcatggctcctttctcctccatgtcaaccatacaca 283 || ||||| ||||| |||||||| |||||||| |||||||||||||| |||||||||||| Sbjct: 276 gacctagataagtataaggcacaagcatggcttctttctcctccatgccaaccatacaca 335 Query: 284 cggcaaggacttcagaagcactcagctgatgcccgggccttttcatttataaagatttta 343 ||||||||||| |||||||| ||||||||||| || || |||||||| ||||||||| | Sbjct: 336 cggcaaggactacagaagcattcagctgatgctcgagcattttcattcataaagattctt 395 Query: 344 agccttatgcaaaacatgagctttcctccacaaatgttatttgtggagaatgttgtcgga 403 | ||| ||| |||||||| |||||||||||||||||||||||||||| || || |||||| Sbjct: 396 aacctaatgaaaaacatgtgctttcctccacaaatgttatttgtggaaaacgtagtcgga 455 Query: 404 ttcgaggtgtctgatacacatgaccagttgctaggggtcctttcaactctcaatttcaac 463 || ||||||||||||||||||||||||||| ||| ||| |||||| ||||||||||||| Sbjct: 456 tttgaggtgtctgatacacatgaccagttgatagaggttctttcagatctcaatttcaac 515 Query: 464 acacaagaattcatcctaagccccttgcagtttggtgtcccatattctagaccgcgctac 523 ||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 516 acacaagaatttatcctaagccccttgcagtttggtatcccatattctagacctcgctac 575 Query: 524 ttctgtttggcgaaacaggaacctatgtgttttccaaatccatcagtcaatgagaagctg 583 || ||| ||||||||| |||||| || |||||| ||||||||||| ||| |||||| Sbjct: 576 ttttgtctggcgaaacgagaacctgtgagttttcaaaatccatcagacaacagcaagctg 635 Query: 584 cttaggacacctacattcctaacattg 610 || ||||||||||||||||||||||| Sbjct: 636 ctccggacacctacattcctaacattg 662 Score = 238 bits (120), Expect = 5e-59 Identities = 261/308 (84%) Strand = Plus / Plus Query: 839 gatattgtataccctgaatcaaaacggtgctgctgttttactaaaagttattatcgctat 898 |||||||||| ||||||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 916 gatattgtatgccctgaatcaaaacgatgctgttgttttaccaaaagttattatcgctat 975 Query: 899 gtgaagggcacaggctctgtactggctacatctaaaaacgtcagaccagttccaaaagag 958 || ||||| |||||||| |||| ||||| || || ||| ||| || | || | |||||| Sbjct: 976 gtcaaggggacaggctccttactagctacgtccaataacctcaaacgaatttccaaagag 1035 Query: 959 aaccttgaaatttcttcattaaatgagttgggtctacgttttttcacacctcgagaggtc 1018 ||||||||||||||||| | || ||||| || |||| |||||||| ||||| ||||| Sbjct: 1036 gaccttgaaatttcttcactgaaggagttaggcttacgatttttcacccctcgtgaggtt 1095 Query: 1019 gccaatttgcattcttttccctcgagtttccgttttccggatcacataggcctcagacag 1078 || ||| ||||||||||||| |||||||||| |||||| |||||||| |||| || || Sbjct: 1096 gctaatctgcattcttttccatcgagtttccactttccgaatcacataagccttaggcaa 1155 Query: 1079 cagtatgccatgctgggtaatagtcttagtgtagcggttgtggctcctttgctgcgctat 1138 |||||||| |||||||| ||||| || |||||||| ||||||| ||||||||||| ||| Sbjct: 1156 cagtatgctatgctgggcaatagcctgagtgtagcagttgtggggcctttgctgcgttat 1215 Query: 1139 ctgtttgc 1146 |||||||| Sbjct: 1216 ctgtttgc 1223
>dbj|AK111502.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P01, full insert sequence Length = 1739 Score = 585 bits (295), Expect = e-163 Identities = 499/567 (88%) Strand = Plus / Plus Query: 44 ccatggagggtcctcgagttctacagcggtatcggcggcatgcggtactccctagcatcg 103 ||||||| |||||||||||||| ||||| |||||||| ||| ||||||| || || || Sbjct: 98 ccatggaaagtcctcgagttctatagcggcatcggcgggatgaggtactcgctggcggcg 157 Query: 104 tcgggcgttcgcgcggaggtggtggaggcctttgacatcaacgacgtcgccaacgacgta 163 ||||||| || || ||||||||||||||||| |||||||||||||| |||||||| || Sbjct: 158 tcgggcgcgcgggccgaggtggtggaggccttcgacatcaacgacgttgccaacgatgtc 217 Query: 164 tacgagcacaacttcgcccaccgcccctgccagggaaacattcaaacactcgctgctggt 223 ||||||| |||||||| ||||||||| | |||||||||||||||||||||| ||||| || Sbjct: 218 tacgagctcaacttcggccaccgcccataccagggaaacattcaaacactcactgctagt 277 Query: 224 gatctagacaagtacaaggcacatgcatggctcctttctcctccatgtcaaccatacaca 283 || ||||| ||||| |||||||| |||||||| |||||||||||||| |||||||||||| Sbjct: 278 gacctagataagtataaggcacaagcatggcttctttctcctccatgccaaccatacaca 337 Query: 284 cggcaaggacttcagaagcactcagctgatgcccgggccttttcatttataaagatttta 343 ||||||||||| |||||||| ||||||||||| || || |||||||| ||||||||| | Sbjct: 338 cggcaaggactacagaagcattcagctgatgctcgagcattttcattcataaagattctt 397 Query: 344 agccttatgcaaaacatgagctttcctccacaaatgttatttgtggagaatgttgtcgga 403 | ||| ||| |||||||| |||||||||||||||||||||||||||| || || |||||| Sbjct: 398 aacctaatgaaaaacatgtgctttcctccacaaatgttatttgtggaaaacgtagtcgga 457 Query: 404 ttcgaggtgtctgatacacatgaccagttgctaggggtcctttcaactctcaatttcaac 463 || ||||||||||||||||||||||||||| ||| ||| |||||| ||||||||||||| Sbjct: 458 tttgaggtgtctgatacacatgaccagttgatagaggttctttcagatctcaatttcaac 517 Query: 464 acacaagaattcatcctaagccccttgcagtttggtgtcccatattctagaccgcgctac 523 ||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 518 acacaagaatttatcctaagccccttgcagtttggtatcccatattctagacctcgctac 577 Query: 524 ttctgtttggcgaaacaggaacctatgtgttttccaaatccatcagtcaatgagaagctg 583 || ||| ||||||||| |||||| || |||||| ||||||||||| ||| |||||| Sbjct: 578 ttttgtctggcgaaacgagaacctgtgagttttcaaaatccatcagacaacagcaagctg 637 Query: 584 cttaggacacctacattcctaacattg 610 || ||||||||||||||||||||||| Sbjct: 638 ctccggacacctacattcctaacattg 664 Score = 238 bits (120), Expect = 5e-59 Identities = 261/308 (84%) Strand = Plus / Plus Query: 839 gatattgtataccctgaatcaaaacggtgctgctgttttactaaaagttattatcgctat 898 |||||||||| ||||||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 917 gatattgtatgccctgaatcaaaacgatgctgttgttttaccaaaagttattatcgctat 976 Query: 899 gtgaagggcacaggctctgtactggctacatctaaaaacgtcagaccagttccaaaagag 958 || ||||| |||||||| |||| ||||| || || ||| ||| || | || | |||||| Sbjct: 977 gtcaaggggacaggctccttactagctacgtccaataacctcaaacgaatttccaaagag 1036 Query: 959 aaccttgaaatttcttcattaaatgagttgggtctacgttttttcacacctcgagaggtc 1018 ||||||||||||||||| | || ||||| || |||| |||||||| ||||| ||||| Sbjct: 1037 gaccttgaaatttcttcactgaaggagttaggcttacgatttttcacccctcgtgaggtt 1096 Query: 1019 gccaatttgcattcttttccctcgagtttccgttttccggatcacataggcctcagacag 1078 || ||| ||||||||||||| |||||||||| |||||| |||||||| |||| || || Sbjct: 1097 gctaatctgcattcttttccatcgagtttccactttccgaatcacataagccttaggcaa 1156 Query: 1079 cagtatgccatgctgggtaatagtcttagtgtagcggttgtggctcctttgctgcgctat 1138 |||||||| |||||||| ||||| || |||||||| ||||||| ||||||||||| ||| Sbjct: 1157 cagtatgctatgctgggcaatagcctgagtgtagcagttgtggggcctttgctgcgttat 1216 Query: 1139 ctgtttgc 1146 |||||||| Sbjct: 1217 ctgtttgc 1224
>gb|AY029557.1| Zea mays DNA methyltransferase ZMET4 mRNA, complete cds Length = 1464 Score = 539 bits (272), Expect = e-149 Identities = 455/516 (88%) Strand = Plus / Plus Query: 24 aggcaatggagacgccgtctccatggagggtcctcgagttctacagcggtatcggcggca 83 |||| |||||| ||||| | || ||||| || ||||||||||||||||| ||||| ||| Sbjct: 24 aggcgatggaggcgccggcaccttggagagtgctcgagttctacagcggcatcggaggcc 83 Query: 84 tgcggtactccctagcatcgtcgggcgttcgcgcggaggtggtggaggcctttgacatca 143 || ||||||| || |||||||||| || |||||||||||||| ||||| ||||||| Sbjct: 84 tgaggtactcgctgatggcgtcgggcgtgcgggcggaggtggtggaagccttcgacatca 143 Query: 144 acgacgtcgccaacgacgtatacgagcacaacttcgcccaccgcccctgccagggaaaca 203 ||||||||||||| ||||| || ||||||||||||| |||||||||||||||||| |||| Sbjct: 144 acgacgtcgccaatgacgtctatgagcacaacttcggccaccgcccctgccaggggaaca 203 Query: 204 ttcaaacactcgctgctggtgatctagacaagtacaaggcacatgcatggctcctttctc 263 ||||||| ||| ||||| |||| ||||||| |||||||||||||||||||| ||||||| Sbjct: 204 ttcaaacgctcactgctagtgacttagacaaatacaaggcacatgcatggcttctttctc 263 Query: 264 ctccatgtcaaccatacacacggcaaggacttcagaagcactcagctgatgcccgggcct 323 ||||||| || ||||||||||| ||||||||||||||||| ||||||||||| || || | Sbjct: 264 ctccatgccagccatacacacgacaaggacttcagaagcattcagctgatgctcgtgcat 323 Query: 324 tttcatttataaagattttaagccttatgcaaaacatgagctttcctccacaaatgttat 383 |||| || || |||||| | | ||| |||||| ||||||||| ||||||||||||||||| Sbjct: 324 tttcgttcatcaagattcttaacctcatgcaagacatgagctatcctccacaaatgttat 383 Query: 384 ttgtggagaatgttgtcggattcgaggtgtctgatacacatgaccagttgctaggggtcc 443 ||||||| || || || ||||| ||||||||||||||||||||||||||||| | ||||| Sbjct: 384 ttgtggaaaacgtagttggatttgaggtgtctgatacacatgaccagttgctggaggtcc 443 Query: 444 tttcaactctcaatttcaacacacaagaattcatcctaagccccttgcagtttggtgtcc 503 |||||| ||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 444 tttcaagtctcaattttaacacgcaagaattcatcctaagccccttacagtttggtgtcc 503 Query: 504 catattctagaccgcgctacttctgtttggcgaaac 539 ||||||||||||| |||||||||||||||||||||| Sbjct: 504 catattctagacctcgctacttctgtttggcgaaac 539 Score = 226 bits (114), Expect = 2e-55 Identities = 281/336 (83%), Gaps = 3/336 (0%) Strand = Plus / Plus Query: 811 cttgattgaacggtggggaaatgctatggatattgtataccctgaatcaaaacggtgctg 870 ||||||||| |||||||| |||||||||||||||||||||||||||| || |||||||| Sbjct: 760 cttgattgagcggtggggcaatgctatggatattgtataccctgaatttaagcggtgctg 819 Query: 871 ctgttttactaaaagttattatcgctatgtgaagggcacaggctctgtactggctacatc 930 |||||| |||||||| || ||||| ||||||||||| ||||||||| | |||||||||| Sbjct: 820 ctgtttcactaaaagctactatcgttatgtgaaggggacaggctctttgttggctacatc 879 Query: 931 taaaaacgtcagaccagttccaaaagagaaccttgaaatttcttcattaaatgagttggg 990 ||||||| ||| ||||| ||||||| || |||||||||| | || |||||||| Sbjct: 880 taaaaacctca---atgttcctgaagagaagctccaaatttcttccctgaaggagttggg 936 Query: 991 tctacgttttttcacacctcgagaggtcgccaatttgcattcttttccctcgagtttccg 1050 ||||| |||||||| ||||| ||||| |||||||| ||||| || || || | |||| | Sbjct: 937 cctacgatttttcacccctcgtgaggttgccaatttccattccttcccttcaaatttctg 996 Query: 1051 ttttccggatcacataggcctcagacagcagtatgccatgctgggtaatagtcttagtgt 1110 || |||||||||||| |||| || || |||||||| ||||||||||| ||||| ||| | Sbjct: 997 cttcccggatcacataagccttaggcaacagtatgctatgctgggtaacagtctgagtat 1056 Query: 1111 agcggttgtggctcctttgctgcgctatctgtttgc 1146 ||| ||||||| ||||||||||| ||||| ||||| Sbjct: 1057 agcagttgtgggtcctttgctgcattatctctttgc 1092
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 170 bits (86), Expect = 1e-38 Identities = 110/118 (93%) Strand = Plus / Minus Query: 408 aggtgtctgatacacatgaccagttgctaggggtcctttcaactctcaatttcaacacac 467 |||||||||||||||||||||||||| ||| ||| |||||| ||||||||||||||||| Sbjct: 24244162 aggtgtctgatacacatgaccagttgatagaggttctttcagatctcaatttcaacacac 24244103 Query: 468 aagaattcatcctaagccccttgcagtttggtgtcccatattctagaccgcgctactt 525 ||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct: 24244102 aagaatttatcctaagccccttgcagtttggtatcccatattctagacctcgctactt 24244045 Score = 131 bits (66), Expect = 8e-27 Identities = 90/98 (91%) Strand = Plus / Minus Query: 194 cagggaaacattcaaacactcgctgctggtgatctagacaagtacaaggcacatgcatgg 253 ||||||||||||||||||||| ||||| |||| ||||| ||||| |||||||| |||||| Sbjct: 24244535 cagggaaacattcaaacactcactgctagtgacctagataagtataaggcacaagcatgg 24244476 Query: 254 ctcctttctcctccatgtcaaccatacacacggcaagg 291 || |||||||||||||| |||||||||||||||||||| Sbjct: 24244475 cttctttctcctccatgccaaccatacacacggcaagg 24244438 Score = 117 bits (59), Expect = 1e-22 Identities = 107/123 (86%) Strand = Plus / Minus Query: 289 aggacttcagaagcactcagctgatgcccgggccttttcatttataaagattttaagcct 348 |||||| |||||||| ||||||||||| || || |||||||| ||||||||| | | ||| Sbjct: 24244365 aggactacagaagcattcagctgatgctcgagcattttcattcataaagattcttaacct 24244306 Query: 349 tatgcaaaacatgagctttcctccacaaatgttatttgtggagaatgttgtcggattcga 408 ||| |||||||| |||||||||||||||||||||||||||| || || |||||||| || Sbjct: 24244305 aatgaaaaacatgtgctttcctccacaaatgttatttgtggaaaacgtagtcggatttga 24244246 Query: 409 ggt 411 ||| Sbjct: 24244245 ggt 24244243 Score = 105 bits (53), Expect = 5e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 839 gatattgtataccctgaatcaaaacggtgctgctgttttactaaaagttattatcgctat 898 |||||||||| ||||||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 24243168 gatattgtatgccctgaatcaaaacgatgctgttgttttaccaaaagttattatcgctat 24243109 Query: 899 gtgaagggcacaggctc 915 || ||||| |||||||| Sbjct: 24243108 gtcaaggggacaggctc 24243092 Score = 95.6 bits (48), Expect = 5e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 102 cgtcgggcgttcgcgcggaggtggtggaggcctttgacatcaacgacgtcgccaacgacg 161 ||||||||| || || ||||||||||||||||| |||||||||||||| |||||||| | Sbjct: 24245217 cgtcgggcgcgcgggccgaggtggtggaggccttcgacatcaacgacgttgccaacgatg 24245158 Query: 162 tatacgagcacaacttcgcccaccgccc 189 | ||||||| |||||||| ||||||||| Sbjct: 24245157 tctacgagctcaacttcggccaccgccc 24245130 Score = 67.9 bits (34), Expect = 1e-07 Identities = 58/66 (87%) Strand = Plus / Minus Query: 1081 gtatgccatgctgggtaatagtcttagtgtagcggttgtggctcctttgctgcgctatct 1140 |||||| |||||||| ||||| || |||||||| ||||||| ||||||||||| ||||| Sbjct: 24242560 gtatgctatgctgggcaatagcctgagtgtagcagttgtggggcctttgctgcgttatct 24242501 Query: 1141 gtttgc 1146 |||||| Sbjct: 24242500 gtttgc 24242495 Score = 61.9 bits (31), Expect = 6e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 532 ggcgaaacaggaacctatgtgttttccaaatccatcagtcaatgagaagctgcttaggac 591 |||||||| |||||| || |||||| ||||||||||| ||| |||||||| |||| Sbjct: 24243667 ggcgaaacgagaacctgtgagttttcaaaatccatcagacaacagcaagctgctccggac 24243608 Query: 592 acctacattcctaacattg 610 ||||||||||||||||||| Sbjct: 24243607 acctacattcctaacattg 24243589 Score = 52.0 bits (26), Expect = 0.006 Identities = 41/46 (89%) Strand = Plus / Minus Query: 1026 tgcattcttttccctcgagtttccgttttccggatcacataggcct 1071 ||||||||||||| |||||||||| |||||| |||||||| |||| Sbjct: 24242775 tgcattcttttccatcgagtttccactttccgaatcacataagcct 24242730 Score = 50.1 bits (25), Expect = 0.024 Identities = 55/65 (84%) Strand = Plus / Minus Query: 953 aaagagaaccttgaaatttcttcattaaatgagttgggtctacgttttttcacacctcga 1012 |||||| ||||||||||||||||| | || ||||| || |||| |||||||| ||||| Sbjct: 24242936 aaagaggaccttgaaatttcttcactgaaggagttaggcttacgatttttcacccctcgt 24242877 Query: 1013 gaggt 1017 ||||| Sbjct: 24242876 gaggt 24242872 Score = 44.1 bits (22), Expect = 1.5 Identities = 43/50 (86%) Strand = Plus / Minus Query: 645 atgaagatgatctggaagtagtatgtaatccaataagaaacttccttgaa 694 |||||||||| |||||| ||||||| || ||||| || ||||||||||| Sbjct: 24243557 atgaagatgagctggaactagtatgcaaaccaatcagtgacttccttgaa 24243508 Score = 44.1 bits (22), Expect = 1.5 Identities = 34/38 (89%) Strand = Plus / Minus Query: 44 ccatggagggtcctcgagttctacagcggtatcggcgg 81 ||||||| |||||||||||||| ||||| |||||||| Sbjct: 24245377 ccatggaaagtcctcgagttctatagcggcatcggcgg 24245340
>dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046B10 Length = 142596 Score = 170 bits (86), Expect = 1e-38 Identities = 110/118 (93%) Strand = Plus / Minus Query: 408 aggtgtctgatacacatgaccagttgctaggggtcctttcaactctcaatttcaacacac 467 |||||||||||||||||||||||||| ||| ||| |||||| ||||||||||||||||| Sbjct: 68726 aggtgtctgatacacatgaccagttgatagaggttctttcagatctcaatttcaacacac 68667 Query: 468 aagaattcatcctaagccccttgcagtttggtgtcccatattctagaccgcgctactt 525 ||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct: 68666 aagaatttatcctaagccccttgcagtttggtatcccatattctagacctcgctactt 68609 Score = 131 bits (66), Expect = 8e-27 Identities = 90/98 (91%) Strand = Plus / Minus Query: 194 cagggaaacattcaaacactcgctgctggtgatctagacaagtacaaggcacatgcatgg 253 ||||||||||||||||||||| ||||| |||| ||||| ||||| |||||||| |||||| Sbjct: 69099 cagggaaacattcaaacactcactgctagtgacctagataagtataaggcacaagcatgg 69040 Query: 254 ctcctttctcctccatgtcaaccatacacacggcaagg 291 || |||||||||||||| |||||||||||||||||||| Sbjct: 69039 cttctttctcctccatgccaaccatacacacggcaagg 69002 Score = 117 bits (59), Expect = 1e-22 Identities = 107/123 (86%) Strand = Plus / Minus Query: 289 aggacttcagaagcactcagctgatgcccgggccttttcatttataaagattttaagcct 348 |||||| |||||||| ||||||||||| || || |||||||| ||||||||| | | ||| Sbjct: 68929 aggactacagaagcattcagctgatgctcgagcattttcattcataaagattcttaacct 68870 Query: 349 tatgcaaaacatgagctttcctccacaaatgttatttgtggagaatgttgtcggattcga 408 ||| |||||||| |||||||||||||||||||||||||||| || || |||||||| || Sbjct: 68869 aatgaaaaacatgtgctttcctccacaaatgttatttgtggaaaacgtagtcggatttga 68810 Query: 409 ggt 411 ||| Sbjct: 68809 ggt 68807 Score = 105 bits (53), Expect = 5e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 839 gatattgtataccctgaatcaaaacggtgctgctgttttactaaaagttattatcgctat 898 |||||||||| ||||||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 67732 gatattgtatgccctgaatcaaaacgatgctgttgttttaccaaaagttattatcgctat 67673 Query: 899 gtgaagggcacaggctc 915 || ||||| |||||||| Sbjct: 67672 gtcaaggggacaggctc 67656 Score = 95.6 bits (48), Expect = 5e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 102 cgtcgggcgttcgcgcggaggtggtggaggcctttgacatcaacgacgtcgccaacgacg 161 ||||||||| || || ||||||||||||||||| |||||||||||||| |||||||| | Sbjct: 69781 cgtcgggcgcgcgggccgaggtggtggaggccttcgacatcaacgacgttgccaacgatg 69722 Query: 162 tatacgagcacaacttcgcccaccgccc 189 | ||||||| |||||||| ||||||||| Sbjct: 69721 tctacgagctcaacttcggccaccgccc 69694 Score = 67.9 bits (34), Expect = 1e-07 Identities = 58/66 (87%) Strand = Plus / Minus Query: 1081 gtatgccatgctgggtaatagtcttagtgtagcggttgtggctcctttgctgcgctatct 1140 |||||| |||||||| ||||| || |||||||| ||||||| ||||||||||| ||||| Sbjct: 67124 gtatgctatgctgggcaatagcctgagtgtagcagttgtggggcctttgctgcgttatct 67065 Query: 1141 gtttgc 1146 |||||| Sbjct: 67064 gtttgc 67059 Score = 61.9 bits (31), Expect = 6e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 532 ggcgaaacaggaacctatgtgttttccaaatccatcagtcaatgagaagctgcttaggac 591 |||||||| |||||| || |||||| ||||||||||| ||| |||||||| |||| Sbjct: 68231 ggcgaaacgagaacctgtgagttttcaaaatccatcagacaacagcaagctgctccggac 68172 Query: 592 acctacattcctaacattg 610 ||||||||||||||||||| Sbjct: 68171 acctacattcctaacattg 68153 Score = 52.0 bits (26), Expect = 0.006 Identities = 41/46 (89%) Strand = Plus / Minus Query: 1026 tgcattcttttccctcgagtttccgttttccggatcacataggcct 1071 ||||||||||||| |||||||||| |||||| |||||||| |||| Sbjct: 67339 tgcattcttttccatcgagtttccactttccgaatcacataagcct 67294 Score = 50.1 bits (25), Expect = 0.024 Identities = 55/65 (84%) Strand = Plus / Minus Query: 953 aaagagaaccttgaaatttcttcattaaatgagttgggtctacgttttttcacacctcga 1012 |||||| ||||||||||||||||| | || ||||| || |||| |||||||| ||||| Sbjct: 67500 aaagaggaccttgaaatttcttcactgaaggagttaggcttacgatttttcacccctcgt 67441 Query: 1013 gaggt 1017 ||||| Sbjct: 67440 gaggt 67436 Score = 44.1 bits (22), Expect = 1.5 Identities = 43/50 (86%) Strand = Plus / Minus Query: 645 atgaagatgatctggaagtagtatgtaatccaataagaaacttccttgaa 694 |||||||||| |||||| ||||||| || ||||| || ||||||||||| Sbjct: 68121 atgaagatgagctggaactagtatgcaaaccaatcagtgacttccttgaa 68072 Score = 44.1 bits (22), Expect = 1.5 Identities = 34/38 (89%) Strand = Plus / Minus Query: 44 ccatggagggtcctcgagttctacagcggtatcggcgg 81 ||||||| |||||||||||||| ||||| |||||||| Sbjct: 69941 ccatggaaagtcctcgagttctatagcggcatcggcgg 69904
>ref|NM_122459.2| Arabidopsis thaliana DNA binding (AT5G25480) mRNA, complete cds Length = 1411 Score = 63.9 bits (32), Expect = 2e-06 Identities = 92/112 (82%) Strand = Plus / Plus Query: 216 ctgctggtgatctagacaagtacaaggcacatgcatggctcctttctcctccatgtcaac 275 |||||| |||| |||| ||||| || ||| |||| ||||| ||||||||||| ||||||| Sbjct: 275 ctgctgctgatttagataagtataatgcagatgcttggcttctttctcctccttgtcaac 334 Query: 276 catacacacggcaaggacttcagaagcactcagctgatgcccgggccttttc 327 | || || | ||||| |||||||| ||||| | |||||| ||||| ||||| Sbjct: 335 cttatactagacaaggccttcagaaacactctggtgatgctcgggctttttc 386 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 368 cctccacaaatgttatttgtggagaatgttgtcggatt 405 |||||||||||||||||||| ||||||||||| ||||| Sbjct: 427 cctccacaaatgttatttgtagagaatgttgttggatt 464 Score = 58.0 bits (29), Expect = 1e-04 Identities = 74/89 (83%) Strand = Plus / Plus Query: 824 tggggaaatgctatggatattgtataccctgaatcaaaacggtgctgctgttttactaaa 883 |||||||| || ||||| ||||| |||||||| ||||| | || || ||||| || || Sbjct: 901 tggggaaacgcaatggacattgtttaccctgattcaaagagatgttgttgtttcacaaag 960 Query: 884 agttattatcgctatgtgaagggcacagg 912 ||||||||||| || |||||||||||||| Sbjct: 961 agttattatcgatacgtgaagggcacagg 989
>gb|BT013930.1| Lycopersicon esculentum clone 132928R, mRNA sequence Length = 1790 Score = 63.9 bits (32), Expect = 2e-06 Identities = 89/108 (82%) Strand = Plus / Plus Query: 808 aagcttgattgaacggtggggaaatgctatggatattgtataccctgaatcaaaacggtg 867 |||| |||||||| | ||||||| ||| ||||||||||| || ||| | ||||| || || Sbjct: 893 aagcctgattgaaagatggggaagtgccatggatattgtttatcctcattcaaagcgttg 952 Query: 868 ctgctgttttactaaaagttattatcgctatgtgaagggcacaggctc 915 ||| |||||||| ||||| ||||| | ||||||||||| || ||||| Sbjct: 953 ctgttgttttacaaaaagctattacagatatgtgaagggtactggctc 1000 Score = 44.1 bits (22), Expect = 1.5 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1001 ttcacacctcgagaggtcgccaatttgcattcttttcc 1038 ||||||||| | ||||| || ||||||||||||||||| Sbjct: 1083 ttcacacctagggaggttgcgaatttgcattcttttcc 1120
>gb|AY530747.1| Arabidopsis thaliana At5g25480 gene, partial cds Length = 935 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 368 cctccacaaatgttatttgtggagaatgttgtcggattcgaggt 411 |||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 669 cctccacaaatgttatttgtagagaatgttgttggatttgaggt 712 Score = 50.1 bits (25), Expect = 0.024 Identities = 52/61 (85%) Strand = Plus / Plus Query: 216 ctgctggtgatctagacaagtacaaggcacatgcatggctcctttctcctccatgtcaac 275 |||||| |||| |||| ||||| || ||| |||| ||||| ||||||||||| ||||||| Sbjct: 441 ctgctgctgatttagataagtataatgcagatgcttggcttctttctcctccttgtcaac 500 Query: 276 c 276 | Sbjct: 501 c 501
>emb|BX831732.1|CNS0A11C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH26ZF01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1355 Score = 63.9 bits (32), Expect = 2e-06 Identities = 92/112 (82%) Strand = Plus / Plus Query: 216 ctgctggtgatctagacaagtacaaggcacatgcatggctcctttctcctccatgtcaac 275 |||||| |||| |||| ||||| || ||| |||| ||||| ||||||||||| ||||||| Sbjct: 257 ctgctgctgatttagataagtataatgcagatgcttggcttctttctcctccttgtcaac 316 Query: 276 catacacacggcaaggacttcagaagcactcagctgatgcccgggccttttc 327 | || || | ||||| |||||||| ||||| | |||||| ||||| ||||| Sbjct: 317 cttatactagacaaggccttcagaaacactctggtgatgctcgggctttttc 368 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 368 cctccacaaatgttatttgtggagaatgttgtcggatt 405 |||||||||||||||||||| ||||||||||| ||||| Sbjct: 409 cctccacaaatgttatttgtagagaatgttgttggatt 446
>gb|AC006601.1|AC006601 Arabidopsis thaliana chromosome V map near 60.5 cM, complete sequence Length = 110684 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 368 cctccacaaatgttatttgtggagaatgttgtcggattcgaggt 411 |||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 29344 cctccacaaatgttatttgtagagaatgttgttggatttgaggt 29301 Score = 58.0 bits (29), Expect = 1e-04 Identities = 74/89 (83%) Strand = Plus / Minus Query: 824 tggggaaatgctatggatattgtataccctgaatcaaaacggtgctgctgttttactaaa 883 |||||||| || ||||| ||||| |||||||| ||||| | || || ||||| || || Sbjct: 28563 tggggaaacgcaatggacattgtttaccctgattcaaagagatgttgttgtttcacaaag 28504 Query: 884 agttattatcgctatgtgaagggcacagg 912 ||||||||||| || |||||||||||||| Sbjct: 28503 agttattatcgatacgtgaagggcacagg 28475 Score = 50.1 bits (25), Expect = 0.024 Identities = 52/61 (85%) Strand = Plus / Minus Query: 216 ctgctggtgatctagacaagtacaaggcacatgcatggctcctttctcctccatgtcaac 275 |||||| |||| |||| ||||| || ||| |||| ||||| ||||||||||| ||||||| Sbjct: 29572 ctgctgctgatttagataagtataatgcagatgcttggcttctttctcctccttgtcaac 29513 Query: 276 c 276 | Sbjct: 29512 c 29512
>gb|AY085281.1| Arabidopsis thaliana clone 142593 mRNA, complete sequence Length = 1390 Score = 60.0 bits (30), Expect = 2e-05 Identities = 87/106 (82%) Strand = Plus / Plus Query: 216 ctgctggtgatctagacaagtacaaggcacatgcatggctcctttctcctccatgtcaac 275 |||||| |||| |||| ||||| || ||| |||| ||||| ||||||||||| ||||||| Sbjct: 275 ctgctgctgatttagataagtataatgcagatgcttggcttctttctcctccttgtcaac 334 Query: 276 catacacacggcaaggacttcagaagcactcagctgatgcccgggc 321 | || || | ||||| |||||||| ||||| | |||||| ||||| Sbjct: 335 cttatactagacaaggccttcagaaacactctggtgatgctcgggc 380 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 368 cctccacaaatgttatttgtggagaatgttgtcggatt 405 |||||||||||||||||||| ||||||||||| ||||| Sbjct: 427 cctccacaaatgttatttgtagagaatgttgttggatt 464 Score = 58.0 bits (29), Expect = 1e-04 Identities = 74/89 (83%) Strand = Plus / Plus Query: 824 tggggaaatgctatggatattgtataccctgaatcaaaacggtgctgctgttttactaaa 883 |||||||| || ||||| ||||| |||||||| ||||| | || || ||||| || || Sbjct: 901 tggggaaacgcaatggacattgtttaccctgattcaaagagatgttgttgtttcacaaag 960 Query: 884 agttattatcgctatgtgaagggcacagg 912 ||||||||||| || |||||||||||||| Sbjct: 961 agttattatcgatacgtgaagggcacagg 989
>emb|CR407555.9| Zebrafish DNA sequence from clone DKEY-260H8 in linkage group 5, complete sequence Length = 156095 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Plus Query: 225 atctagacaagtacaaggcacatgcat 251 ||||||||| ||||||||||||||||| Sbjct: 47223 atctagacaggtacaaggcacatgcat 47249
>gb|AC158308.4| Mus musculus chromosome 3, clone RP23-182M12, complete sequence Length = 176856 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 968 atttcttcattaaatgagttgg 989 |||||||||||||||||||||| Sbjct: 72042 atttcttcattaaatgagttgg 72021
>emb|CT009479.4| M.truncatula DNA sequence from clone MTH2-164E3 on chromosome 3, complete sequence Length = 133351 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 679 aagaaacttccttgaagcacaa 700 |||||||||||||||||||||| Sbjct: 59982 aagaaacttccttgaagcacaa 59961
>emb|CR932799.1| Mus musculus chromosome 2, clone RPCI-22-207E02 strain 129/Sv, complete sequence Length = 151675 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 949 tccaaaagagaaccttgaaatttctt 974 ||||||||||||| |||||||||||| Sbjct: 60946 tccaaaagagaacattgaaatttctt 60971
>gb|AC102600.11| Mus musculus chromosome 3, clone RP23-376E16, complete sequence Length = 131703 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 968 atttcttcattaaatgagttgg 989 |||||||||||||||||||||| Sbjct: 129067 atttcttcattaaatgagttgg 129088
>emb|BX571892.9| Mouse DNA sequence from clone RP23-207B21 on chromosome 2, complete sequence Length = 170046 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 949 tccaaaagagaaccttgaaatttctt 974 ||||||||||||| |||||||||||| Sbjct: 91265 tccaaaagagaacattgaaatttctt 91290
>emb|AL111168.1| Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome Length = 1641481 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 959 aaccttgaaatttcttcatta 979 ||||||||||||||||||||| Sbjct: 325596 aaccttgaaatttcttcatta 325576
>gb|AC189554.1| Brassica rapa subsp. pekinensis clone KBrH006C14, complete sequence Length = 138468 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1155 agagaagttctcaatcatttg 1175 ||||||||||||||||||||| Sbjct: 107730 agagaagttctcaatcatttg 107710
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 959 aaccttgaaatttcttcatta 979 ||||||||||||||||||||| Sbjct: 363282 aaccttgaaatttcttcatta 363262
>gb|AC068605.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-284I15, complete sequence Length = 198551 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 832 tgctatggatattgtataccc 852 ||||||||||||||||||||| Sbjct: 17956 tgctatggatattgtataccc 17976
>gb|AY245882.1| Brassica napus NAC-domain protein 5-7 (NAC5-7) mRNA, complete cds Length = 1066 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1155 agagaagttctcaatcatttg 1175 ||||||||||||||||||||| Sbjct: 932 agagaagttctcaatcatttg 952
>gb|AC121497.15| Mus musculus chromosome 6, clone RP23-2M23, complete sequence Length = 231059 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 832 tgctatggatattgtataccc 852 ||||||||||||||||||||| Sbjct: 137880 tgctatggatattgtataccc 137860
>gb|AC026882.6| Homo sapiens chromosome 3 clone RP11-211K13 map 3p, complete sequence Length = 162422 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 702 gtattgttattggagacgggg 722 ||||||||||||||||||||| Sbjct: 121114 gtattgttattggagacgggg 121134
>dbj|AK042999.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730046L11 product:unclassifiable, full insert sequence Length = 2502 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 324 tttcatttataaagattttaagcct 348 ||||||||||||| ||||||||||| Sbjct: 196 tttcatttataaacattttaagcct 172
>emb|CT030440.1| Xenopus tropicalis finished cDNA, clone TEgg056h23 Length = 4968 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 agaatgaagatgatctggaag 662 ||||||||||||||||||||| Sbjct: 973 agaatgaagatgatctggaag 993
>emb|AL732508.13| Mouse DNA sequence from clone RP23-270A11 on chromosome 4, complete sequence Length = 72254 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 324 tttcatttataaagattttaagcct 348 ||||||||||||| ||||||||||| Sbjct: 50791 tttcatttataaacattttaagcct 50815
>gb|AF289207.2|H010058S03 Mus musculus aspartyl beta-hydroxylase (ASPH) gene, exons 4 through 13, and alternative exon 14a; and aspartyl beta-hydroxylase Humbug splice variant, complete cds Length = 31248 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 324 tttcatttataaagattttaagcct 348 ||||||||||||| ||||||||||| Sbjct: 15803 tttcatttataaacattttaagcct 15779
>gb|AC157823.2| Mus musculus BAC clone RP23-382L21 from chromosome 12, complete sequence Length = 203726 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1494 caagaaatggatgcaaatcaa 1514 ||||||||||||||||||||| Sbjct: 146000 caagaaatggatgcaaatcaa 145980
>gb|AC133578.12| Mus musculus chromosome 15, clone RP23-212I23, complete sequence Length = 235230 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 618 cgacagctcagaatagctatg 638 ||||||||||||||||||||| Sbjct: 119648 cgacagctcagaatagctatg 119668 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 266,753,004 Number of extensions: 13912701 Number of successful extensions: 273227 Number of sequences better than 10.0: 31 Number of HSP's gapped: 273221 Number of HSP's successfully gapped: 67 Length of query: 1540 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1517 Effective length of database: 18,503,978,556 Effective search space: 28070535469452 Effective search space used: 28070535469452 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)