ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf61k03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK068898:Os06g0728000 53 5e-07
2AK062226:Os06g0728000 53 5e-07
3AF541859:Os06g0728000 53 5e-07
4AF093632:Os06g0728000 53 5e-07
5AB079636:Os02g0670400 31 9e-04
6AK066658:Os09g0551600 38 0.023
7AK069900:Os08g0101100 29 0.092
8AK107090:Os03g0133000 32 1.3
9AK073228:Os03g0333300 31 2.2
10AK063700:Os04g0445100 30 3.7
11Os04g0442900:Os04g0442900 30 6.3
12Os04g0405100:Os04g0405100 30 6.3 
>AK068898:Os06g0728000 |
          Length = 157
 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +1

Query: 646 EKAPFVAKANKLKGEYNKAIAAYNKGE 726
           +KAP+VAKANKLK EYNKAIAAYNKGE
Sbjct: 88  DKAPYVAKANKLKAEYNKAIAAYNKGE 114



 Score = 39.3 bits (90), Expect(2) = 2e-06
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +2

Query: 287 EFREEFKQKNPKNKSVAAVSSS 352
           EFR+EFK+KNPKNKSVAAV  +
Sbjct: 55  EFRKEFKEKNPKNKSVAAVGKA 76



 Score = 31.6 bits (70), Expect(2) = 2e-06
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +3

Query: 465 KTFIQVGKAAGERWKSLSES 524
           K+   VGKAAG+RWKSL+E+
Sbjct: 68  KSVAAVGKAAGDRWKSLTEA 87
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>AK062226:Os06g0728000 |
          Length = 157

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +1

Query: 646 EKAPFVAKANKLKGEYNKAIAAYNKGE 726
           +KAP+VAKANKLK EYNKAIAAYNKGE
Sbjct: 88  DKAPYVAKANKLKAEYNKAIAAYNKGE 114



 Score = 39.3 bits (90), Expect(2) = 2e-06
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +2

Query: 287 EFREEFKQKNPKNKSVAAVSSS 352
           EFR+EFK+KNPKNKSVAAV  +
Sbjct: 55  EFRKEFKEKNPKNKSVAAVGKA 76



 Score = 31.6 bits (70), Expect(2) = 2e-06
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +3

Query: 465 KTFIQVGKAAGERWKSLSES 524
           K+   VGKAAG+RWKSL+E+
Sbjct: 68  KSVAAVGKAAGDRWKSLTEA 87
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>AF541859:Os06g0728000 |
          Length = 157

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +1

Query: 646 EKAPFVAKANKLKGEYNKAIAAYNKGE 726
           +KAP+VAKANKLK EYNKAIAAYNKGE
Sbjct: 88  DKAPYVAKANKLKAEYNKAIAAYNKGE 114



 Score = 39.3 bits (90), Expect(2) = 2e-06
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +2

Query: 287 EFREEFKQKNPKNKSVAAVSSS 352
           EFR+EFK+KNPKNKSVAAV  +
Sbjct: 55  EFRKEFKEKNPKNKSVAAVGKA 76



 Score = 31.6 bits (70), Expect(2) = 2e-06
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +3

Query: 465 KTFIQVGKAAGERWKSLSES 524
           K+   VGKAAG+RWKSL+E+
Sbjct: 68  KSVAAVGKAAGDRWKSLTEA 87
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>AF093632:Os06g0728000 |
          Length = 157

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +1

Query: 646 EKAPFVAKANKLKGEYNKAIAAYNKGE 726
           +KAP+VAKANKLK EYNKAIAAYNKGE
Sbjct: 88  DKAPYVAKANKLKAEYNKAIAAYNKGE 114



 Score = 39.3 bits (90), Expect(2) = 2e-06
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +2

Query: 287 EFREEFKQKNPKNKSVAAVSSS 352
           EFR+EFK+KNPKNKSVAAV  +
Sbjct: 55  EFRKEFKEKNPKNKSVAAVGKA 76



 Score = 31.6 bits (70), Expect(2) = 2e-06
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +3

Query: 465 KTFIQVGKAAGERWKSLSES 524
           K+   VGKAAG+RWKSL+E+
Sbjct: 68  KSVAAVGKAAGDRWKSLTEA 87
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>AB079636:Os02g0670400 |
          Length = 145

 Score = 31.2 bits (69), Expect(3) = 9e-04
 Identities = 17/35 (48%), Positives = 24/35 (68%)
 Frame = +2

Query: 248 PASACWLVPSIRGEFREEFKQKNPKNKSVAAVSSS 352
           P SA ++  S   EFR+E++  +P NKSVAAVS +
Sbjct: 36  PPSAFFVFMS---EFRQEYQAAHPDNKSVAAVSKA 67



 Score = 26.9 bits (58), Expect(3) = 9e-04
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +3

Query: 465 KTFIQVGKAAGERWKSLSE 521
           K+   V KAAGE+W+++SE
Sbjct: 59  KSVAAVSKAAGEKWRAMSE 77



 Score = 22.3 bits (46), Expect(3) = 9e-04
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 129 RAPSAFFVFM 158
           R PSAFFVFM
Sbjct: 35  RPPSAFFVFM 44



 Score = 30.4 bits (67), Expect = 3.7
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +1

Query: 643 QEKAPFVAKANKLKGEYNKAIAAYNKGE 726
           QEKAP+V KA + K +Y K  A ++K E
Sbjct: 78  QEKAPYVDKAGQKKQDYEKTKANFDKKE 105
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>AK066658:Os09g0551600 |
          Length = 127

 Score = 37.7 bits (86), Expect = 0.023
 Identities = 17/24 (70%), Positives = 18/24 (75%)
 Frame = +1

Query: 646 EKAPFVAKANKLKGEYNKAIAAYN 717
           +KAPFV KA KLK EY K I AYN
Sbjct: 74  DKAPFVTKAEKLKAEYTKKIDAYN 97
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>AK069900:Os08g0101100 |
          Length = 203

 Score = 29.3 bits (64), Expect(2) = 0.092
 Identities = 15/33 (45%), Positives = 24/33 (72%)
 Frame = +2

Query: 248 PASACWLVPSIRGEFREEFKQKNPKNKSVAAVS 346
           P +A +L  S   +FR+E+K ++P NKSV+AV+
Sbjct: 95  PPTAFFLFMS---DFRKEYKAEHPDNKSVSAVA 124



 Score = 25.4 bits (54), Expect(2) = 0.092
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 465 KTFIQVGKAAGERWKSLSE 521
           K+   V K  GERWKS+S+
Sbjct: 118 KSVSAVAKEGGERWKSMSD 136
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>AK107090:Os03g0133000 |
          Length = 316

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +1

Query: 277 YQGRVPRGVQAEEPQEQVRRRRKFLPPY*FALLSLPPPRMYKLICQ 414
           YQGR PRG + +    + R     LP Y  A  + PPP+   ++C+
Sbjct: 126 YQGRAPRGTKTDWVMNEYR-----LPDYGAARAAAPPPKEDMVLCK 166
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>AK073228:Os03g0333300 |
          Length = 270

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 12/52 (23%)
 Frame = -3

Query: 242 VENNGRPEITGRKKR------------ESGNRKDGGSEDVHEDEEGAGRPLG 123
           V   G P  TG KK+            E+G+ +D   + + EDEEG G  LG
Sbjct: 51  VAETGEPSFTGMKKKKKKHVEHDTSLTEAGDGEDAIDDQIGEDEEGEGIVLG 102
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>AK063700:Os04g0445100 |
          Length = 215

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -3

Query: 245 QVENNGRPEITGRKKRESGNRKDGGSEDVHEDEEGAGR 132
           +VE+N    I+G ++RE    + GG +  H +E   GR
Sbjct: 104 EVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGR 141
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>Os04g0442900:Os04g0442900 |
          Length = 1376

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
 Frame = +1

Query: 1351 VIRSLSISTRIIPSFTSHRHVVLPFSC------RPSIRPAITDSAPCWRPRRRGAPCGVR 1512
            +I   +++ ++  +FT ++ V  P         R  +   +TDSA    PR+RG P G R
Sbjct: 732  IINLQNLANKLPDAFTDYKGVTRPHIPAVNAPERVEVTQKVTDSALTPHPRKRGRPPGAR 791

Query: 1513 VYVLRR 1530
              V +R
Sbjct: 792  DKVPQR 797
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>Os04g0405100:Os04g0405100 |
          Length = 307

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 1460 IALPVGAPAGGVLLAVLGCMSSAAGVPLPVP 1552
            +A  VGA  GG L  ++G ++   G P PVP
Sbjct: 58   VATAVGAVQGGALGGLMGTLAPDGGSPFPVP 88


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 40,101,307
Number of extensions: 878456
Number of successful extensions: 2787
Number of sequences better than 10.0: 12
Number of HSP's gapped: 2782
Number of HSP's successfully gapped: 24
Length of query: 530
Length of database: 15,399,855
Length adjustment: 105
Effective length of query: 425
Effective length of database: 11,195,550
Effective search space: 4758108750
Effective search space used: 4758108750
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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