ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf61k03 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os06g51220:12006.t04805:unspliced-genomic DNA-binding protein MNB1B, putative, expressed| Length = 2029 Score = 64.8 bits (135), Expect(6) = 2e-29 Identities = 27/32 (84%), Positives = 29/32 (90%) Frame = +1 / +3 Query: 646 EKAPFVAKANKLKGEYNKAIAAYNKGEVPTCR 741 +KAP+VAKANKLK EYNKAIAAYNKGEV T R Sbjct: 978 DKAPYVAKANKLKAEYNKAIAAYNKGEV*TTR 1073 Score = 50.6 bits (104), Expect(6) = 2e-29 Identities = 21/26 (80%), Positives = 24/26 (92%) Frame = +2 / +2 Query: 275 SIRGEFREEFKQKNPKNKSVAAVSSS 352 S+R EFR+EFK+KNPKNKSVAAVS S Sbjct: 611 SLREEFRKEFKEKNPKNKSVAAVSFS 688 Score = 42.3 bits (86), Expect(6) = 2e-29 Identities = 17/23 (73%), Positives = 21/23 (91%) Frame = +3 / +3 Query: 462 AKTFIQVGKAAGERWKSLSESVS 530 +K IQVGKAAG+RWKSL+E+VS Sbjct: 816 SKQKIQVGKAAGDRWKSLTEAVS 884 Score = 28.1 bits (55), Expect(6) = 2e-29 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = +1 / +2 Query: 1453 ITDSAPCWR 1479 ITDSAPCWR Sbjct: 1715 ITDSAPCWR 1741 Score = 26.3 bits (51), Expect(6) = 2e-29 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = +2 / +3 Query: 122 AQEGAQRLLRLHVRP 166 AQEG+ R LR +VRP Sbjct: 504 AQEGSLRFLRFYVRP 548 Score = 23.1 bits (44), Expect(6) = 2e-29 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = +3 / +1 Query: 1251 LQDEDDDE* 1277 LQDEDDDE* Sbjct: 1549 LQDEDDDE* 1575 Score = 46.4 bits (95), Expect(7) = 9e-20 Identities = 20/24 (83%), Positives = 21/24 (87%) Frame = -2 / -2 Query: 351 EELTAATDLFLGFFCLNSSRNSPL 280 E+LTAATDLFLGFF LNS RNS L Sbjct: 687 EKLTAATDLFLGFFSLNSLRNSSL 616 Score = 34.1 bits (68), Expect(7) = 9e-20 Identities = 13/18 (72%), Positives = 15/18 (83%) Frame = -3 / -2 Query: 158 HEDEEGAGRPLGLVGVLA 105 H++EE G PLGLVGVLA Sbjct: 540 HKNEESGGSPLGLVGVLA 487 Score = 32.2 bits (64), Expect(7) = 9e-20 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = -1 / -1 Query: 529 LTDSLKLFHLSPAALPT*I 473 LT S++ FHLSPAA PT*I Sbjct: 883 LTASVRDFHLSPAAFPT*I 827 Score = 28.1 bits (55), Expect(7) = 9e-20 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = -2 / -3 Query: 741 SACRYLALVVGSN 703 S+C YLALVVGSN Sbjct: 1073 SSCLYLALVVGSN 1035 Score = 28.1 bits (55), Expect(7) = 9e-20 Identities = 8/12 (66%), Positives = 8/12 (66%) Frame = -1 / -2 Query: 679 ACWPWQQRGPFP 644 ACWPW R P P Sbjct: 1011 ACWPWLHREPCP 976 Score = 25.4 bits (49), Expect(7) = 9e-20 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = -1 / -3 Query: 1480 GANRERYPL*QD 1445 GAN+ERYPL* + Sbjct: 1742 GANKERYPL*DE 1707 Score = 24.0 bits (46), Expect(7) = 9e-20 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = -3 / -2 Query: 899 TWTCRIXXXXXXXXPWQRPS 840 TWTC+I PW+ PS Sbjct: 1215 TWTCQIPPRRPPLPPWRVPS 1156 Score = 34.5 bits (69), Expect(4) = 4e-07 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +3 / +2 Query: 645 GKGPLCCXXXXXXXXXXXXHCCLQQGRG 728 G+G LC HCCLQQGRG Sbjct: 977 GQGSLCSQGQQAQGRVQQGHCCLQQGRG 1060 Score = 32.2 bits (64), Expect(4) = 4e-07 Identities = 15/23 (65%), Positives = 16/23 (69%) Frame = +1 / +1 Query: 280 QGRVPRGVQAEEPQEQVRRRRKF 348 QG VP GVQ EEPQE + R KF Sbjct: 616 QGGVP*GVQGEEPQE*ICRCCKF 684 Score = 26.3 bits (51), Expect(4) = 4e-07 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = +3 / +1 Query: 129 RAPSAFFVFM 158 RAPSAFFVFM Sbjct: 511 RAPSAFFVFM 540 Score = 26.3 bits (51), Expect(4) = 4e-07 Identities = 11/12 (91%), Positives = 11/12 (91%) Frame = +3 / +1 Query: 1446 SCYNG*RSLLAP 1481 S YNG*RSLLAP Sbjct: 1708 SSYNG*RSLLAP 1743 Score = 34.1 bits (68), Expect(3) = 8e-04 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = -2 / -1 Query: 132 PSWACWGPC 106 PSWACWGPC Sbjct: 514 PSWACWGPC 488 Score = 28.6 bits (56), Expect(3) = 8e-04 Identities = 12/15 (80%), Positives = 12/15 (80%) Frame = -3 / -3 Query: 323 SWGSSA*TPRGTRP* 279 SWGSS *TP GT P* Sbjct: 659 SWGSSP*TPYGTPP* 615 Score = 25.8 bits (50), Expect(3) = 8e-04 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = -3 / -3 Query: 521 FAQALPPLTGRFADLNKSF 465 F Q PP+TG F+ LN F Sbjct: 875 FGQGFPPITGCFSYLNFLF 819
>LOC_Os09g37910:12009.t03265:unspliced-genomic HMG1/2-like protein, putative, expressed| Length = 2118 Score = 47.3 bits (97), Expect(4) = 1e-11 Identities = 19/30 (63%), Positives = 22/30 (73%) Frame = +1 / +3 Query: 640 LQEKAPFVAKANKLKGEYNKAIAAYNKGEV 729 +Q+KAPFV KA KLK EY K I AYN +V Sbjct: 1371 MQDKAPFVTKAEKLKAEYTKKIDAYNNKQV 1460 Score = 33.6 bits (67), Expect(4) = 1e-11 Identities = 10/18 (55%), Positives = 17/18 (94%) Frame = +3 / +2 Query: 477 QVGKAAGERWKSLSESVS 530 Q+GKA G++WKS++++VS Sbjct: 710 QIGKAGGDKWKSMTDAVS 763 Score = 29.0 bits (57), Expect(4) = 1e-11 Identities = 10/22 (45%), Positives = 17/22 (77%) Frame = +2 / +2 Query: 281 RGEFREEFKQKNPKNKSVAAVS 346 R +FR+++K+K+P K V+ VS Sbjct: 554 REQFRKDYKEKHPNVKQVSVVS 619 Score = 25.8 bits (50), Expect(4) = 1e-11 Identities = 11/13 (84%), Positives = 11/13 (84%) Frame = +3 / +1 Query: 129 RAPSAFFVFMYVL 167 R PSAFFVFM VL Sbjct: 433 RPPSAFFVFM*VL 471
>LOC_Os02g44930:12002.t04083:unspliced-genomic HMG1/2-like protein, putative, expressed| Length = 1939 Score = 36.8 bits (74), Expect(5) = 2e-09 Identities = 15/27 (55%), Positives = 20/27 (74%) Frame = +2 / +2 Query: 281 RGEFREEFKQKNPKNKSVAAVSSSHPT 361 R EFR+E++ +P NKSVAAVS P+ Sbjct: 524 RSEFRQEYQAAHPDNKSVAAVSFLTPS 604 Score = 31.8 bits (63), Expect(5) = 2e-09 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = +3 / +2 Query: 480 VGKAAGERWKSLSESVS 530 V KAAGE+W+++SE VS Sbjct: 674 VSKAAGEKWRAMSEQVS 724 Score = 29.9 bits (59), Expect(5) = 2e-09 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +1 / +3 Query: 646 EKAPFVAKANKLKGEYNKAIAAYNK 720 EKAP+V KA + K +Y K A ++K Sbjct: 1011 EKAPYVDKAGQKKQDYEKTKANFDK 1085 Score = 24.0 bits (46), Expect(5) = 2e-09 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = +3 / +2 Query: 129 RAPSAFFVFM 158 R PSAFFVFM Sbjct: 362 RPPSAFFVFM 391 Score = 22.6 bits (43), Expect(5) = 2e-09 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = +3 / +3 Query: 1245 CSLQDEDDDE 1274 CSLQ+ +DDE Sbjct: 1371 CSLQENEDDE 1400
>LOC_Os04g47690:12004.t04293:unspliced-genomic HMG1/2-like protein, putative, expressed| Length = 2966 Score = 32.7 bits (65), Expect(2) = 0.001 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +2 / +2 Query: 281 RGEFREEFKQKNPKNKSVAAVSS 349 R EFR ++ +K+P K VAAVS+ Sbjct: 527 RAEFRPQYMEKHPNTKGVAAVST 595 Score = 30.4 bits (60), Expect(2) = 0.001 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = +3 / +2 Query: 459 CAKTFIQVGKAAGERWKSLSESVS 530 C +I V KAAGE+W+++S+ VS Sbjct: 665 C*LWWI*VTKAAGEKWRAMSDEVS 736
>LOC_Os08g01100:12008.t00010:unspliced-genomic HMG1/2-like protein, putative, expressed| Length = 1370 Score = 35.4 bits (71), Expect(2) = 0.001 Identities = 13/29 (44%), Positives = 21/29 (72%) Frame = +2 / +2 Query: 260 CWLVPSIRGEFREEFKQKNPKNKSVAAVS 346 C + R +FR+E+K ++P NKSV+AV+ Sbjct: 587 CMICLICRSDFRKEYKAEHPDNKSVSAVA 673 Score = 27.6 bits (54), Expect(2) = 0.001 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +3 / +2 Query: 465 KTFIQVGKAAGERWKSLSE 521 K+ V K GERWKS+S+ Sbjct: 653 KSVSAVAKEGGERWKSMSD 709
>LOC_Os11g02620:12011.t00155:unspliced-genomic transposon protein, putative, Mutator sub-class, expressed| Length = 4189 Score = 34.1 bits (68), Expect(2) = 0.009 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -2 / -1 Query: 1344 HPQLRGLAQQLPPCPPEQRCFFFTRRHPR 1258 HP R L QLP PP++R RRH R Sbjct: 3919 HPHPRDLQLQLPVLPPQRRVVVALRRHAR 3833 Score = 25.8 bits (50), Expect(2) = 0.009 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -2 / -3 Query: 1515 HPNTARSTPPAGAPTGSA 1462 HP + S+PPA AP SA Sbjct: 3974 HPASPASSPPAPAPAPSA 3921
>LOC_Os12g02540:12012.t00150:unspliced-genomic transposon protein, putative, Mutator sub-class, expressed| Length = 4762 Score = 32.2 bits (64), Expect(2) = 0.031 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = -2 / -1 Query: 1344 HPQLRGLAQQLPPCPPEQRCFFFTRRHPR 1258 HP R L QLP PP+ R RRH R Sbjct: 3880 HPHPRDLQLQLPVLPPQTRVVVPLRRHAR 3794 Score = 25.8 bits (50), Expect(2) = 0.031 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -2 / -3 Query: 1515 HPNTARSTPPAGAPTGSA 1462 HP + S+PPA AP SA Sbjct: 3935 HPASPASSPPAPAPAPSA 3882
>LOC_Os07g39270:12007.t03588:unspliced-genomic geranylgeranyl pyrophosphate synthetase 1, chloroplast precursor,| putative, expressed Length = 2442 Score = 31.3 bits (62), Expect(2) = 0.032 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = +1 / +3 Query: 1477 RPRRRGAPCGVRVYVLRRGCAPACTY 1554 RPRR CG R + GC P C + Sbjct: 447 RPRRSTRRCGTRCWRAGSGCGPRCAW 524 Score = 26.7 bits (52), Expect(2) = 0.032 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = +1 / +3 Query: 1462 SAPCWRPRRR 1491 SAP WRPRRR Sbjct: 300 SAPSWRPRRR 329
>LOC_Os01g47600:12001.t04207:unspliced-genomic HMG1/2-like protein, putative, expressed| Length = 3411 Score = 28.1 bits (55), Expect(4) = 0.042 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = +3 / +3 Query: 474 IQVGKAAGERWKSLSESV 527 +QVGKA GE+W +++ V Sbjct: 1458 LQVGKACGEKWNTMTFEV 1511 Score = 27.2 bits (53), Expect(4) = 0.042 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = +2 / +2 Query: 281 RGEFREEFKQKNPKNKSVAAVS 346 R +FR+ +K++NP KS+ VS Sbjct: 1334 REDFRKTYKEENPSVKSMQEVS 1399 Score = 24.0 bits (46), Expect(4) = 0.042 Identities = 10/13 (76%), Positives = 10/13 (76%) Frame = +2 / +3 Query: 125 QEGAQRLLRLHVR 163 QE A RLL LHVR Sbjct: 258 QEAAHRLLLLHVR 296 Score = 23.5 bits (45), Expect(4) = 0.042 Identities = 6/12 (50%), Positives = 7/12 (58%) Frame = +3 / +3 Query: 765 CFCSTFYSAHLW 800 C+C Y HLW Sbjct: 2454 CYCCEAYQDHLW 2489
>LOC_Os09g18290:12009.t01614:unspliced-genomic hypothetical protein| Length = 701 Score = 30.9 bits (61), Expect(2) = 0.52 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = +1 / +3 Query: 1387 PSFTSHRHVVLPFSCRPSIRPAITDSAPCWRP 1482 PS HR + S+RP ++ S PC RP Sbjct: 288 PSSRGHRRRIQTPEAERSLRPPLSSSPPCLRP 383 Score = 23.1 bits (44), Expect(2) = 0.52 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = +2 / +1 Query: 1463 ALPVGAPAGGVLLAVLGCMSSAAGVPLPVP 1552 ALPV A G L AV G S P P+P Sbjct: 448 ALPVVAGDGSALPAVAGDGSFPLPPP*PMP 537
>LOC_Os11g42310:12011.t03762:unspliced-genomic F-box domain containing protein| Length = 1776 Score = 36.3 bits (73), Expect = 0.58 Identities = 17/40 (42%), Positives = 18/40 (45%) Frame = +1 / -3 Query: 1429 CRPSIRPAITDSAPCWRPRRRGAPCGVRVYVLRRGCAPAC 1548 CR R + A WRPRRRG G R RR C C Sbjct: 1177 CRRCRRGSTRCRAAVWRPRRRGGA*GSRGCAARRPCTRRC 1058
>LOC_Os02g51119:12002.t005561:unspliced-genomic expressed protein| Length = 10839 Score = 36.3 bits (73), Expect = 0.58 Identities = 18/44 (40%), Positives = 24/44 (54%) Frame = +2 / +1 Query: 230 RCSQPDPASACWLVPSIRGEFREEFKQKNPKNKSVAAVSSSHPT 361 R S DP++A VP IR E + +NP S ++SS HPT Sbjct: 5005 RKSCMDPSAALSFVPCIRKLN*ENYATQNPMGPSFPSLSSKHPT 5136
>LOC_Os01g42900:12001.t03807:unspliced-genomic ATPase, coupled to transmembrane movement of substances, putative,| expressed Length = 1992 Score = 35.4 bits (71), Expect = 1.1 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = -3 / -1 Query: 221 EITGRKKRESGNRKDGGSEDVHEDEEGAGRPLGLVG 114 ++ GR++ E+ + + GG D +DE G P GL G Sbjct: 1635 DVAGRQRAEARDERVGGEHDEPDDEGEVGEPAGLPG 1528
>LOC_Os06g47620:12006.t04448:unspliced-genomic IAA-amino acid hydrolase ILR1-like 6 precursor, putative, expressed| Length = 5540 Score = 35.4 bits (71), Expect = 1.1 Identities = 13/26 (50%), Positives = 13/26 (50%) Frame = +1 / -2 Query: 1429 CRPSIRPAITDSAPCWRPRRRGAPCG 1506 CRP RP CWR RR G P G Sbjct: 595 CRPGARPPAAGRCRCWRRRRCGRPGG 518
>LOC_Os09g25560:12009.t02235:unspliced-genomic membrane protein, putative, expressed| Length = 5940 Score = 26.3 bits (51), Expect(2) = 1.1 Identities = 9/18 (50%), Positives = 9/18 (50%) Frame = +2 / +1 Query: 1292 CSGGQGGSCCARPLSCGW 1345 CSGG S C P S W Sbjct: 4870 CSGGTSSSACPTPPSSPW 4923 Score = 26.3 bits (51), Expect(2) = 1.1 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = +1 / +1 Query: 1471 CWRPRRRGAPCGVR 1512 CWRPR PC R Sbjct: 5053 CWRPRPAAPPCCAR 5094
>LOC_Os04g36750:12004.t03296:unspliced-genomic 22.0 kDa class IV heat shock protein precursor, putative, expressed| Length = 943 Score = 27.6 bits (54), Expect(2) = 1.2 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -2 / -3 Query: 1512 PNTARSTPPAGAPTGSAIRYSRTDGRTT 1429 P + PP GAPT + R +R RTT Sbjct: 284 PGSGTGRPPPGAPTPAPPRPARRRRRTT 201 Score = 24.9 bits (48), Expect(2) = 1.2 Identities = 8/14 (57%), Positives = 11/14 (78%) Frame = -2 / -3 Query: 1329 GLAQQLPPCPPEQR 1288 G A++ PPC PE+R Sbjct: 200 GAARRPPPCSPERR 159
>LOC_Os02g44180:12002.t04010:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5238 Score = 35.0 bits (70), Expect = 1.5 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = +1 / -1 Query: 1462 SAPCWRPRRRGAPCGVRVYVLRRGCAPACTYL 1557 S+P W PRRR P G+R +RR A C +L Sbjct: 246 SSPEWPPRRRPVPPGLRSAPVRRRYADRCRHL 151
>LOC_Os02g43540:12002.t03939:unspliced-genomic glycine-rich cell wall structural protein 2 precursor, putative,| expressed Length = 979 Score = 29.5 bits (58), Expect(3) = 1.7 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = +1 / -3 Query: 1480 PRRRGAPCGVRVYVLRRGCAP 1542 PRRR PC R RRG AP Sbjct: 179 PRRRRRPCTARTRTRRRGGAP 117 Score = 23.1 bits (44), Expect(3) = 1.7 Identities = 11/32 (34%), Positives = 15/32 (46%) Frame = +1 / -2 Query: 319 QEQVRRRRKFLPPY*FALLSLPPPRMYKLICQ 414 +E R + LPP F + PPPR + Q Sbjct: 732 EEDEDGRLQLLPPPSFCCVLPPPPRKLPRLLQ 637 Score = 21.7 bits (41), Expect(3) = 1.7 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = +1 / -3 Query: 1432 RPSIRPAITDSAPCWRPRRRGAP 1500 RPS R A + RPRRR P Sbjct: 245 RPSTRAAAAAPSFPARPRRRRPP 177
>LOC_Os05g27000:12005.t02354:unspliced-genomic expressed protein| Length = 2255 Score = 26.7 bits (52), Expect(2) = 2.1 Identities = 10/14 (71%), Positives = 10/14 (71%) Frame = -3 / -3 Query: 323 SWGSSA*TPRGTRP 282 SW S A TPRGT P Sbjct: 357 SWASPAPTPRGTAP 316 Score = 24.9 bits (48), Expect(2) = 2.1 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = -2 / -3 Query: 393 AWWW*RKQSKSVGWEELTAA 334 AW W R++S S W TAA Sbjct: 456 AWPWRRRRSPSCWWCSRTAA 397
>LOC_Os05g47490:12005.t04185:unspliced-genomic multidrug resistance protein 4, putative, expressed| Length = 6639 Score = 25.8 bits (50), Expect(2) = 2.6 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = +2 / -2 Query: 1358 GAYPSPLELSQVSLHTVMLFYLFHV 1432 GA+ + EL Q S+H ++L + HV Sbjct: 6218 GAFGAHAELHQRSVHAILLRHQLHV 6144 Score = 25.4 bits (49), Expect(2) = 2.6 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = +1 / -3 Query: 1441 IRPAITDSAPCWRPRRRGA 1497 +RP ITDS+ W R A Sbjct: 6052 VRPTITDSSAAWTARSDSA 5996
>LOC_Os09g26350:12009.t02314:unspliced-genomic expressed protein| Length = 997 Score = 28.6 bits (56), Expect(2) = 2.6 Identities = 7/12 (58%), Positives = 8/12 (66%) Frame = +1 / +3 Query: 13 SLICWLWWCVGW 48 S+ WLWW GW Sbjct: 33 SIPAWLWWLTGW 68 Score = 26.7 bits (52), Expect(2) = 2.6 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = +1 / +1 Query: 1483 RRRGAPCGVRVYVLR 1527 R RG PCGVR V+R Sbjct: 922 RHRGRPCGVRPCVVR 966
>LOC_Os11g34090:12011.t02962:unspliced-genomic expressed protein| Length = 3452 Score = 34.1 bits (68), Expect = 2.8 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +3 / -2 Query: 366 CFAFSTTTTHVQINLPGPVDWAMIWELTSCFC 461 C ST+TTHV+++ P P A + + S C Sbjct: 103 CSVLSTSTTHVRLSPPSPAPPATVMSIVSVLC 8
>LOC_Os03g15090:12003.t01295:unspliced-genomic hypothetical protein| Length = 636 Score = 34.1 bits (68), Expect = 2.8 Identities = 19/58 (32%), Positives = 24/58 (41%) Frame = -3 / +3 Query: 296 RGTRP**MVPTNKRKQGQVENNGRPEITGRKKRESGNRKDGGSEDVHEDEEGAGRPLG 123 RG R VP Q + R G +R + R+ G E+EEG GRP G Sbjct: 309 RGRRRGQGVPQGGPADVQPDRGDRQGAGGAGRRAAARRRRGRGRGPREEEEGEGRPAG 482
>LOC_Os12g38220:12012.t03503:unspliced-genomic hypothetical protein| Length = 276 Score = 34.1 bits (68), Expect = 2.8 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +2 / +2 Query: 1262 G*RRVKKKHLCSGGQGGSCCARPLSCGWW 1348 G R +++ GG GG+ CAR + GWW Sbjct: 95 GRHRRRRRRRRRGGGGGAACARWSAAGWW 181
>LOC_Os11g09800:12011.t00872:unspliced-genomic hypothetical protein| Length = 1884 Score = 34.1 bits (68), Expect = 2.8 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +1 / +2 Query: 1429 CRPSIRPAITDSAPCWRPRRRGAPCGVRVYVLR 1527 CRP P + S+P R R +PC +R +LR Sbjct: 518 CRPRRPPVLAPSSPTARAHRPSSPCALRAGLLR 616
>LOC_Os05g47960:12005.t04231:unspliced-genomic expressed protein| Length = 811 Score = 34.1 bits (68), Expect = 2.8 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = +1 / -1 Query: 1444 RPAITDSAPCWRPRRRGAPC 1503 RP + P W PRRRGAPC Sbjct: 439 RPPWPSAGPPWWPRRRGAPC 380
>LOC_Os04g43800:12004.t03920:unspliced-genomic phenylalanine ammonia-lyase, putative, expressed| Length = 2745 Score = 34.1 bits (68), Expect = 2.8 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +1 / +1 Query: 1444 RPAITDSAPCWRPRRRGAPCGVRVYVLRRG 1533 R A +A C RPRRRG PC + RG Sbjct: 646 RSATATTATCCRPRRRGQPCSSASTLCSRG 735
>LOC_Os03g44970:12003.t03881:unspliced-genomic hypothetical protein| Length = 357 Score = 34.1 bits (68), Expect = 2.8 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +1 / +2 Query: 1462 SAPCWRPRRRGAPC 1503 S PCWRP RR +PC Sbjct: 41 SLPCWRPARRASPC 82
>LOC_Os12g02200:12012.t00116:unspliced-genomic CBL-interacting serine/threonine-protein kinase 15, putative,| expressed Length = 3196 Score = 33.6 bits (67), Expect = 3.9 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = +3 / +2 Query: 741 TPAV*PCCCFCSTFYSAHLWTVICLF 818 TPA+ PC C S F S + +VICLF Sbjct: 686 TPAMCPCACPLS*FASEFICSVICLF 763
>LOC_Os07g03080:12007.t00198:unspliced-genomic conserved hypothetical protein| Length = 622 Score = 33.6 bits (67), Expect = 3.9 Identities = 19/43 (44%), Positives = 19/43 (44%) Frame = +1 / -1 Query: 1426 SCRPSIRPAITDSAPCWRPRRRGAPCGVRVYVLRRGCAPACTY 1554 S RPS T SAP R RRG PC RV AP Y Sbjct: 361 SRRPSCHERTTPSAPPQRRTRRGHPCRRRVPSFPVSSAPLLPY 233
>LOC_Os06g38890:12006.t03587:unspliced-genomic conserved hypothetical protein| Length = 6186 Score = 33.6 bits (67), Expect = 3.9 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -2 / -1 Query: 1548 TGRGTPAAEDIHPNTARSTPPAGAPTG 1468 T R +PAA P+T R+T P PTG Sbjct: 453 TARASPAAHPFFPSTTRTTSPPRHPTG 373
>LOC_Os06g13830:12006.t01258:unspliced-genomic endoglucanase precursor, putative, expressed| Length = 3524 Score = 33.6 bits (67), Expect = 3.9 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = -2 / -3 Query: 1512 PNTARSTPPAGAPTGSAIRYSR 1447 P TARSTPP GAP+ R SR Sbjct: 3012 PCTARSTPPGGAPSPGTSRRSR 2947
>LOC_Os02g25300:12002.t02227:unspliced-genomic hypothetical protein| Length = 405 Score = 33.6 bits (67), Expect = 3.9 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -2 / -2 Query: 1548 TGRGTPAAEDIHPNTARSTPPAGAPTG 1468 T R +PAA P+T R+T P PTG Sbjct: 350 TARASPAAHPFFPSTTRTTSPPRHPTG 270
>LOC_Os02g21190:12002.t01909:unspliced-genomic expressed protein| Length = 18503 Score = 33.1 bits (66), Expect = 5.3 Identities = 12/32 (37%), Positives = 21/32 (65%) Frame = +3 / -1 Query: 1128 IKRSIIVLVRKVLNLRHNKHLLRTVVVYVLNM 1223 +K + L RK+ N H KHLL +++Y+L++ Sbjct: 10841 VKLR*VFLTRKIDNTYHKKHLL*QILIYILSV 10746
>LOC_Os09g36760:12009.t03152:unspliced-genomic bZIP-like protein, putative, expressed| Length = 4216 Score = 33.1 bits (66), Expect = 5.3 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 / -2 Query: 295 RGVQAEEPQEQVRRRRKFLPPY*FALLSLPPPRM 396 RG + + E R RR+ +PP LL +PPPR+ Sbjct: 153 RGARGTQRPEIQRVRRRHVPPRLHQLLRVPPPRL 52
>LOC_Os08g42340:12008.t03963:unspliced-genomic conserved hypothetical protein| Length = 492 Score = 33.1 bits (66), Expect = 5.3 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -2 / -1 Query: 1548 TGRGTPAAEDIHPNTARSTPPAGAPTG 1468 T R +PAA P+T R+T P PTG Sbjct: 459 TARASPAAHPFFPSTTRTTSPPCHPTG 379
>LOC_Os07g19290:12007.t01784:unspliced-genomic hypothetical protein| Length = 1549 Score = 33.1 bits (66), Expect = 5.3 Identities = 17/32 (53%), Positives = 18/32 (56%) Frame = +1 / -1 Query: 1420 PFSCRPSIRPAITDSAPCWRPRRRGAPCGVRV 1515 P S RPS R T SAP R R+G PC RV Sbjct: 367 PPSRRPSRREQTTPSAPPQRRNRQGHPCRRRV 272
>LOC_Os06g36240:12006.t03321:unspliced-genomic pollen allergen Phl p 11, putative, expressed| Length = 1062 Score = 33.1 bits (66), Expect = 5.3 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = +1 / -1 Query: 1474 WRPRRRGAPCGVRVYVLRRGCAPA 1545 W RRGAPCG R + R GC A Sbjct: 651 WSRSRRGAPCGRRRWGWRSGCRSA 580
>LOC_Os04g38480:12004.t03419:unspliced-genomic BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor,| putative, expressed Length = 5245 Score = 33.1 bits (66), Expect = 5.3 Identities = 15/45 (33%), Positives = 18/45 (40%) Frame = +2 / +3 Query: 1307 GGSCCARPLSCGWWLS*GAYPSPLELSQVSLHTVMLFYLFHVVRP 1441 GG C R SCGWW A +P V H + L + P Sbjct: 228 GGGCAWRCRSCGWWRWP*AGSAPTRRVSVIFHRIQLRFSADYAHP 362
>LOC_Os03g06970:12003.t00563:unspliced-genomic pollenless3, putative, expressed| Length = 2863 Score = 33.1 bits (66), Expect = 5.3 Identities = 10/13 (76%), Positives = 10/13 (76%) Frame = +1 / -1 Query: 1468 PCWRPRRRGAPCG 1506 PCWRP R APCG Sbjct: 2164 PCWRPGRPSAPCG 2126
>LOC_Os01g70180:12001.t06319:unspliced-genomic secondary cell wall-related glycosyltransferase family 47, putative,| expressed Length = 3931 Score = 33.1 bits (66), Expect = 5.3 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +1 / +2 Query: 1426 SCRPSIRPAITDSAPCWRPRRRGAPC 1503 S RPS + S+ CWRPRR PC Sbjct: 3428 SWRPSRSTRSSGSSGCWRPRR*SRPC 3505
>LOC_Os04g42230:12004.t03777:unspliced-genomic hypothetical protein| Length = 651 Score = 29.9 bits (59), Expect(2) = 5.8 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -2 / -2 Query: 1536 TPAAEDIHPNTARSTPPAGAPTGSAIRYS 1450 T +A P T + PP+GAPT SA +S Sbjct: 539 TGSA*QPQPTTRSTPPPSGAPTTSATSFS 453 Score = 23.5 bits (45), Expect(2) = 5.8 Identities = 12/31 (38%), Positives = 14/31 (45%) Frame = -2 / -3 Query: 1341 PQLRGLAQQLPPCPPEQRCFFFTRRHPRPAT 1249 P+ R + PP PP R R PR AT Sbjct: 313 PRARAGPRPRPPSPPPSRRRRRRGRRPRRAT 221
>LOC_Os06g24420:12006.t02253:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 8824 Score = 31.8 bits (63), Expect(2) = 7.2 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +1 / -2 Query: 697 KAIAAYNKGEVPTCRPQRFNLAVVSVLRSIVLIFGP*FVCLEHCC 831 +A+ A+ G T R R N+ V R + +IF P F C+ C Sbjct: 5268 QALTAFEPGLKITNRD*RSNMPVTLFNRGLKIIFSPGFYCIRDYC 5134 Score = 24.9 bits (48), Expect(2) = 7.2 Identities = 9/24 (37%), Positives = 11/24 (45%) Frame = +3 / -1 Query: 1386 PKFHFTPSCCFTFFMSSVHPSCYN 1457 P ++ P C F HPS YN Sbjct: 4972 PSSYYQPQCYRPFQWDGSHPSKYN 4901
>LOC_Os11g21850:12011.t01855:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5405 Score = 32.7 bits (65), Expect = 7.3 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 / -3 Query: 1137 SIIVLVRKVLNLRHNKHLLRTVVVYVLNMRIISLC 1241 S++ LVRK + H K LLR + Y+L R++ C Sbjct: 4584 SLVRLVRKDVRRIHRKELLRVWIQYLLVCRLLHYC 4480
>LOC_Os05g03780:12005.t00275:unspliced-genomic metal tolerance protein A2, putative, expressed| Length = 3569 Score = 32.7 bits (65), Expect = 7.3 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +3 / +2 Query: 744 PAV*PCCCFCSTFYSA 791 P V PCCC+C F+SA Sbjct: 278 PGVIPCCCYCFGFWSA 325
>LOC_Os02g02710:12002.t00170:unspliced-genomic carboxypeptidase A, putative, expressed| Length = 4528 Score = 32.7 bits (65), Expect = 7.3 Identities = 18/39 (46%), Positives = 18/39 (46%) Frame = -3 / -1 Query: 248 GQVENNGRPEITGRKKRESGNRKDGGSEDVHEDEEGAGR 132 G VE G GR R G DGG E E EE AGR Sbjct: 271 GVVEGAGDRGDGGRGPRGGGGGYDGGGERHGESEEAAGR 155
>LOC_Os09g29530:12009.t02631:unspliced-genomic hypothetical protein| Length = 252 Score = 32.7 bits (65), Expect = 7.3 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = -2 / +2 Query: 1512 PNTARSTPPAGAPTGSAIRYSRTDG 1438 P+TARST + PTGS+ RY R G Sbjct: 131 PSTARSTARSAPPTGSSPRYWRRAG 205
>LOC_Os09g07610:12009.t00557:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 8286 Score = 32.7 bits (65), Expect = 7.3 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +1 / -1 Query: 1405 RHVVLPFSCRPSIRPAITDSAPCWRPRRRG 1494 R V++PFSCR S R AP P+ RG Sbjct: 7866 RPVIIPFSCRHSSRSETAQVAPSNAPKCRG 7777
>LOC_Os04g33220:12004.t02998:unspliced-genomic SAM domain family protein, expressed| Length = 3979 Score = 32.7 bits (65), Expect = 7.3 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +2 / +1 Query: 1460 IALPVGAPAGGVLLAVLGCMSSAAGVPLPVP 1552 +A VGA GG L ++G ++ G P PVP Sbjct: 280 VATAVGAVQGGALGGLMGTLAPDGGSPFPVP 372
>LOC_Os03g21540:12003.t01907:unspliced-genomic protein kinase, putative, expressed| Length = 3196 Score = 32.7 bits (65), Expect = 7.3 Identities = 16/43 (37%), Positives = 18/43 (41%) Frame = +1 / -3 Query: 1426 SCRPSIRPAITDSAPCWRPRRRGAPCGVRVYVLRRGCAPACTY 1554 S R PA WRPRRRG+P G R A C + Sbjct: 512 SAR*GTAPAAQKGPARWRPRRRGSPAGTWSPCPRSRAARPCRW 384
>LOC_Os02g52820:12002.t04862:unspliced-genomic expressed protein| Length = 3372 Score = 32.7 bits (65), Expect = 7.3 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = +2 / -1 Query: 1298 GGQGGSCCARPLSCGWW 1348 GG+GG+C +R + C WW Sbjct: 189 GGRGGTCPSRWIQCWWW 139
>LOC_Os01g56420:12001.t05051:unspliced-genomic copper transporter 1, putative, expressed| Length = 840 Score = 32.7 bits (65), Expect = 7.3 Identities = 14/28 (50%), Positives = 15/28 (53%) Frame = +1 / -2 Query: 1465 APCWRPRRRGAPCGVRVYVLRRGCAPAC 1548 APC RPR R P R +RRG P C Sbjct: 350 APCARPRARARPPPGRAAPVRRGRRPPC 267
>LOC_Os01g26980:12001.t02402:unspliced-genomic Transposable element protein, putative, MuDR| Length = 10419 Score = 32.7 bits (65), Expect = 7.3 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = -1 / -2 Query: 1246 QQHKLIILMFRTYTTTVLNRCLLCLRF 1166 Q +LI L+FR +T + RC+LC +F Sbjct: 641 QVSQLISLVFRAHTFQIAKRCVLCKKF 561 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 576,783,820 Number of extensions: 8974630 Number of successful extensions: 55119 Number of sequences better than 10.0: 53 Length of query: 530 Length of database: 55,613,886 Length adjustment: 51 Effective length of query: 479 Effective length of database: 52,743,708 Effective search space: 25264236132 Effective search space used: 25264236132 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
