ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf64c02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK072741:Os03g0308200 37 0.060
2Os10g0346600:Os10g0346600 32 1.9
3Os07g0651500:Os07g0651500 31 3.3
4AK064973:Os04g0629700 31 3.3
5Os02g0132100:Os02g0132100 30 7.4
6AK122108:Os03g0711800 29 9.6

>AK072741:Os03g0308200 |
          Length = 988
 Score = 36.6 bits (83), Expect = 0.060
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = +1

Query: 604 VAALISVAGDLCSHYRSQLFSYLLTCQSITSVQTQLNNKVENYLE--LLARHSGCNGIKE 777
           +AA + VAGDLC H R  L +     +S +  +  LN  ++N+L+  LL   +G N ++ 
Sbjct: 380 IAAELVVAGDLCRHLRKTLEA----MESASIEELNLNESLQNFLQDCLLEVVTGINDVRP 435

Query: 778 LYSV 789
           LY +
Sbjct: 436 LYDM 439



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>Os10g0346600:Os10g0346600 |
          Length = 631

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 1148 C*SKDKSFQKKCYKSVLKTLNQCLRTVSMMIGHLISDLSH 1267
            C  KDK + KKC ++V+K+L   ++ V   +G   +D  H
Sbjct: 315  CPMKDKKYNKKCAETVIKSLGLDVKKVDKCMGDPNADSDH 354



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>Os07g0651500:Os07g0651500 |
          Length = 1881

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
 Frame = +1

Query: 736 ELLARHSGCNGIKELY-----SVEVSAVLTGFYQTKSYKTWDRTSKDRFKFDILVRNCGR 900
           ++  R  GCN   ++      + E++A++ G +  K YK           FD+LV + GR
Sbjct: 247 QVTLRLLGCNAKDDVQYNLPTNSEIAAIIVGDFSAKEYK-----------FDVLVYDKGR 295

Query: 901 GLADFLPV 924
           GL    P+
Sbjct: 296 GLCQISPL 303



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>AK064973:Os04g0629700 |
          Length = 812

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 20/74 (27%), Positives = 35/74 (47%)
 Frame = +1

Query: 490 NETQSSIQHEISLIAKIIEDVENLYNDNAEVMLSGFYLVAALISVAGDLCSHYRSQLFSY 669
           N   + + +   L  K  +D E+L    +   +SGF L  +++SV   L  HY S   + 
Sbjct: 321 NTLSAELANYKELAGKSTKDCESLSVKVSAFEVSGFRLTKSILSVRNYLAHHYASAQETC 380

Query: 670 LLTCQSITSVQTQL 711
            +  + I ++Q QL
Sbjct: 381 SMQQEQIQTLQKQL 394



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>Os02g0132100:Os02g0132100 |
          Length = 871

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +1

Query: 1273 LLDHIFKHLRETLTDLDLSDMYPHLLERLDDSQDPIRIEITKAIQNFFQCTQLKMSP 1443
            LL  + +HL      L L D  PHLL  L  S  P+R+ +  ++  F     L  +P
Sbjct: 61   LLPSLLRHL------LSLPDPAPHLLALLSSSSSPLRLPLGFSLSAFRSLCALPSAP 111



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>AK122108:Os03g0711800 |
          Length = 1267

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 1435 MSPGTFEYVVRGILIHLDDQNEQLQLAIFKALQT 1536
            M+PG F     GI+  LDD  ++L + + K L T
Sbjct: 359  MTPGEFWLQCEGIVQDLDDHRQELPMGVLKKLYT 392


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 43,728,610
Number of extensions: 870209
Number of successful extensions: 1924
Number of sequences better than 10.0: 6
Number of HSP's gapped: 1924
Number of HSP's successfully gapped: 6
Length of query: 606
Length of database: 15,399,855
Length adjustment: 106
Effective length of query: 500
Effective length of database: 11,155,509
Effective search space: 5577754500
Effective search space used: 5577754500
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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