| Clone Name | FLbaf64c02 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os05g11460:12005.t00978:unspliced-genomic hypothetical protein| Length = 2175 Score = 28.1 bits (55), Expect(2) = 0.23 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -1 / -1 Query: 1569 LENKSWLNISSCLQCFEDSKL 1507 L ++++LN SCL CFE K+ Sbjct: 1101 LTSRNFLNF*SCLHCFEAPKI 1039 Score = 27.2 bits (53), Expect(2) = 0.23 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = -2 / -2 Query: 1433 LSCVHWKKF*IALVISILIGSCESSNL 1353 ++C+ WK *I L LIG C+ S + Sbjct: 926 ITCIKWKTR*ILLTELCLIG*CKMSQI 846
>LOC_Os01g25290:12001.t02247:unspliced-genomic hypothetical protein| Length = 1062 Score = 35.9 bits (72), Expect = 0.92 Identities = 12/34 (35%), Positives = 24/34 (70%) Frame = -1 / +1 Query: 1749 LQRYFPMLIYFVINYLLTHLTNTLIHFIIIVCLF 1648 +Q+ + ++IYFV++Y +TH T ++I+ + I F Sbjct: 304 IQKIYVIIIYFVMSYFITHSTLSVIYILYICIKF 405
>LOC_Os06g12460:12006.t01122:unspliced-genomic CSLA3 - cellulose synthase-like family A; mannan synthase, expressed| Length = 4815 Score = 26.7 bits (52), Expect(2) = 1.7 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = +3 / -1 Query: 1506 SACYLQSTANSCLY*AKTCSQ 1568 S C+ +SCLY KTC Q Sbjct: 2541 SGCFSPHILHSCLYYPKTCIQ 2479 Score = 25.4 bits (49), Expect(2) = 1.7 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +1 / -2 Query: 1405 QNFFQCTQLKMSPG 1446 Q+FFQCT L PG Sbjct: 2576 QSFFQCTSLVSFPG 2535
>LOC_Os11g28530:12011.t02465:unspliced-genomic ent-kaurene synthase B, chloroplast precursor, putative, expressed| Length = 14245 Score = 35.0 bits (70), Expect = 1.7 Identities = 11/31 (35%), Positives = 24/31 (77%) Frame = -1 / +3 Query: 1752 FLQRYFPMLIYFVINYLLTHLTNTLIHFIII 1660 F+Q+ + ++IYFV++ +TH T+++I+ + I Sbjct: 11064 FIQKIYVIVIYFVMSCFITHSTSSVIYILYI 11156
>LOC_Os03g26260:12003.t02315:unspliced-genomic NB-ARC domain containing protein| Length = 7500 Score = 35.0 bits (70), Expect = 1.7 Identities = 12/34 (35%), Positives = 24/34 (70%) Frame = -1 / -1 Query: 1749 LQRYFPMLIYFVINYLLTHLTNTLIHFIIIVCLF 1648 +Q+ + ++IYFV++Y +TH T ++I+ + I F Sbjct: 4641 IQKIYIIIIYFVMSYFITHSTLSVIYILYICINF 4540
>LOC_Os02g54830:12002.t05061:unspliced-genomic RING-H2 finger protein ATL2C, putative, expressed| Length = 1772 Score = 34.1 bits (68), Expect = 3.3 Identities = 19/61 (31%), Positives = 25/61 (40%) Frame = -2 / -3 Query: 341 WASICXXXXXXXLMTALRI*SRCFCISLSARTMICLSWDRAFTLTKTLLLNSRDSLQAFS 162 W S C ++A + RC C RT C S T+ KT +N+ L FS Sbjct: 459 WNSCCSCPSNAVALSASSLALRCRCSRSRCRTSRCSSPHTKNTIAKTATMNTMLGLILFS 280 Query: 161 T 159 T Sbjct: 279 T 277
>LOC_Os09g25139:12009.t02194:unspliced-genomic expressed protein| Length = 6262 Score = 34.1 bits (68), Expect = 3.3 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -1 / +3 Query: 1746 QRYFPMLIYFVINYLLTHLTNTLIHFIIIVCLFHCLL 1636 +RY ++ Y LL + N +IHF++ V L H L+ Sbjct: 5667 ERYIYLVYYCCTYLLLNGILNNMIHFVVHVLLHHLLM 5777
>LOC_Os04g57550:12004.t05221:unspliced-genomic lysine-specific histone demethylase 1, putative, expressed| Length = 3392 Score = 34.1 bits (68), Expect = 3.3 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = -1 / +3 Query: 1689 TNTLIHFIIIVCLFHCLLN*TNQLLAYLGILL 1594 TNT I+F I+ LF C+L N L +L ILL Sbjct: 2097 TNTTINFSILKSLFQCILAPQNYLSFHLSILL 2192
>LOC_Os04g53760:12004.t04849:unspliced-genomic kinesin-1, putative, expressed| Length = 5188 Score = 34.1 bits (68), Expect = 3.3 Identities = 20/74 (27%), Positives = 35/74 (47%) Frame = +1 / +1 Query: 490 NETQSSIQHEISLIAKIIEDVENLYNDNAEVMLSGFYLVAALISVAGDLCSHYRSQLFSY 669 N + + + L K +D E+L + +SGF L +++SV L HY S + Sbjct: 1975 NTLSAELANYKELAGKSTKDCESLSVKVSAFEVSGFRLTKSILSVRNYLAHHYASAQETC 2154 Query: 670 LLTCQSITSVQTQL 711 + + I ++Q QL Sbjct: 2155 SMQQEQIQTLQKQL 2196
>LOC_Os04g51172:12004.t04594:unspliced-genomic major intrinsic protein, putative, expressed| Length = 7744 Score = 34.1 bits (68), Expect = 3.3 Identities = 12/34 (35%), Positives = 23/34 (67%) Frame = -1 / -3 Query: 1749 LQRYFPMLIYFVINYLLTHLTNTLIHFIIIVCLF 1648 +Q+ + ++IYFV++ +TH+T LI+ + I F Sbjct: 4400 IQKNYVIIIYFVMSCFITHITLNLIYILYICIKF 4299
>LOC_Os01g44980:12001.t03957:unspliced-genomic peptide deformylase, chloroplast precursor, putative, expressed| Length = 3277 Score = 34.1 bits (68), Expect = 3.3 Identities = 11/34 (32%), Positives = 23/34 (67%) Frame = -1 / -2 Query: 1749 LQRYFPMLIYFVINYLLTHLTNTLIHFIIIVCLF 1648 +++ + +IYFV++Y +TH T ++I+ + I F Sbjct: 1368 IEKNYVFIIYFVVSYFITHSTLSMIYTLYICIKF 1267
>LOC_Os03g12570:12003.t01056:unspliced-genomic DNA cytosine methyltransferase MET2a, putative, expressed| Length = 11118 Score = 33.1 bits (66), Expect(2) = 3.6 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -1 / +3 Query: 1722 YFVINYLLTHLTNTLIHFIIIVCLFHCLLN 1633 YF++ Y +LT+ IH ++ C CLL+ Sbjct: 2547 YFILYYYFEYLTDAKIHLLLQYCQSQCLLS 2636 Score = 25.4 bits (49), Expect(2) = 3.6 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = -3 / +1 Query: 385 HSQHRHQVAHIR*QFGHQ 332 H +H H+V H+R GH+ Sbjct: 8779 HRRHGHRVLHLRPAAGHR 8832
>LOC_Os03g21970:12003.t01950:unspliced-genomic DNA binding protein, putative, expressed| Length = 2303 Score = 33.6 bits (67), Expect = 4.5 Identities = 16/45 (35%), Positives = 25/45 (55%) Frame = -2 / -2 Query: 1301 LKCLKIWSRS*HEINLRSGAQSSLRQFLSTGLMSLTHSCSTSSET 1167 L C+ + S ++L S + SL FL + +SLTH+ T S+T Sbjct: 310 LSCVPSTTSSSSSVSLYSSSSLSLSLFLISSPLSLTHTTQTQSQT 176
>LOC_Os12g01710:12012.t00069:unspliced-genomic hypothetical protein| Length = 3234 Score = 33.6 bits (67), Expect = 4.5 Identities = 11/31 (35%), Positives = 22/31 (70%) Frame = -1 / +3 Query: 1752 FLQRYFPMLIYFVINYLLTHLTNTLIHFIII 1660 F+Q+ + ++I FV+NY +T T ++I+ + I Sbjct: 2493 FIQKIYVIIICFVVNYFITQSTISMIYILYI 2585
>LOC_Os01g09580:12001.t00836:unspliced-genomic serine/threonine-protein kinase Eg2-like, putative, expressed| Length = 4481 Score = 33.6 bits (67), Expect = 4.5 Identities = 11/34 (32%), Positives = 24/34 (70%) Frame = -1 / -3 Query: 1749 LQRYFPMLIYFVINYLLTHLTNTLIHFIIIVCLF 1648 +Q+ + ++IYFV++ +TH T ++I+ + I +F Sbjct: 2211 IQKIYAIIIYFVMSCFITHNTLSVIYILYICIIF 2110
>LOC_Os07g49370:12007.t04565:unspliced-genomic beta3-glucuronyltransferase, putative, expressed| Length = 5891 Score = 25.8 bits (50), Expect(2) = 5.4 Identities = 9/26 (34%), Positives = 16/26 (61%) Frame = -3 / +3 Query: 1777 LILHTTEVVFTKIFSYAYILCY*LST 1700 L+ HT ++ I+ Y YI+C *+ + Sbjct: 4842 LVTHTHTHIYIYIYIYIYIVCV*VKS 4919 Score = 24.4 bits (47), Expect(2) = 5.4 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -1 / +2 Query: 1662 IVCLFHCLLN*TN 1624 +VCLF CLLN N Sbjct: 5039 LVCLFACLLNFIN 5077
>LOC_Os11g09480:12011.t00840:unspliced-genomic F-box domain containing protein, expressed| Length = 2354 Score = 25.4 bits (49), Expect(2) = 5.9 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = -1 / +1 Query: 1719 FVINYLLTHLTNTLIHFIIIVCLF 1648 FVI L L+NTL+ II+ +F Sbjct: 1363 FVIK*LFLRLSNTLLFLIIVQFIF 1434 Score = 24.9 bits (48), Expect(2) = 5.9 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -1 / +2 Query: 1755 LFLQRYFPMLIYFVI 1711 LFL YFP +IY ++ Sbjct: 1235 LFLPNYFPYMIYILL 1279
>LOC_Os10g11370:12010.t00937:unspliced-genomic protease inhibitor/seed storage/LTP family protein| Length = 3154 Score = 33.1 bits (66), Expect = 6.2 Identities = 13/42 (30%), Positives = 25/42 (59%) Frame = -1 / -3 Query: 1773 FCILLKLFLQRYFPMLIYFVINYLLTHLTNTLIHFIIIVCLF 1648 F L +Q+ + ++IYFV++ +TH T ++I+ + I F Sbjct: 1586 FTCLTIRLIQKIYVIIIYFVMSCFITHSTLSMIYILYICIKF 1461
>LOC_Os09g13910:12009.t01180:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 4608 Score = 33.1 bits (66), Expect = 6.2 Identities = 12/34 (35%), Positives = 23/34 (67%) Frame = -1 / +2 Query: 1749 LQRYFPMLIYFVINYLLTHLTNTLIHFIIIVCLF 1648 +Q+ + ++IYFVI+ +TH T ++I+ + I F Sbjct: 1238 IQKIYVIIIYFVISCFITHSTLSVIYILYICTKF 1339
>LOC_Os02g57990:12002.t05370:unspliced-genomic 3-beta hydroxysteroid dehydrogenase/isomerase, putative, expressed| Length = 3725 Score = 33.1 bits (66), Expect = 6.2 Identities = 11/34 (32%), Positives = 24/34 (70%) Frame = -1 / +3 Query: 1749 LQRYFPMLIYFVINYLLTHLTNTLIHFIIIVCLF 1648 +Q+ + ++IYFV++ +TH T ++I+ + I +F Sbjct: 3060 IQKIYIIIIYFVMSCFITHSTLSVIYILYICIIF 3161
>LOC_Os01g64520:12001.t05819:unspliced-genomic uricase, putative, expressed| Length = 4241 Score = 33.1 bits (66), Expect = 6.2 Identities = 11/34 (32%), Positives = 24/34 (70%) Frame = -1 / -3 Query: 1749 LQRYFPMLIYFVINYLLTHLTNTLIHFIIIVCLF 1648 +Q+ + ++IYFV++ +TH+T ++I+ + I F Sbjct: 4122 IQKIYVIIIYFVMSCFITHITLSVIYILYICINF 4021
>LOC_Os03g13730:12003.t01166:unspliced-genomic translocase of chloroplast 34, putative, expressed| Length = 4044 Score = 29.9 bits (59), Expect(2) = 6.6 Identities = 15/46 (32%), Positives = 22/46 (47%) Frame = -1 / +1 Query: 1773 FCILLKLFLQRYFPMLIYFVINYLLTHLTNTLIHFIIIVCLFHCLL 1636 F ++LQ LI+F+ Y LT T+IHF+ V L+ Sbjct: 2236 FFFFFAIYLQLPLSKLIFFLHVYYLTCSFRTIIHFLSCVVAVSLLI 2373 Score = 26.3 bits (51), Expect(2) = 6.6 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = -3 / +2 Query: 766 HCSHCVWQV 740 H SHC+WQV Sbjct: 2825 HMSHCIWQV 2851
>LOC_Os05g46090:12005.t04097:unspliced-genomic Leucine Rich Repeat family protein| Length = 3742 Score = 28.6 bits (56), Expect(2) = 8.3 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -1 / +3 Query: 1596 LLWQRISCLLENKSWLNISSC 1534 L++ +I CLLE S+LN+ C Sbjct: 2439 LVYLKIPCLLEQLSYLNVDLC 2501 Score = 27.2 bits (53), Expect(2) = 8.3 Identities = 8/18 (44%), Positives = 14/18 (77%) Frame = -2 / +1 Query: 1757 SCFYKDIFLCLYTLLLTI 1704 SCF D+FLC+Y + +++ Sbjct: 547 SCFKLDLFLCVYPIQMSM 600
>LOC_Os08g01850:12008.t00084:unspliced-genomic polyneuridine-aldehyde esterase precursor, putative, expressed| Length = 4220 Score = 32.7 bits (65), Expect = 8.5 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = +2 / +3 Query: 86 KSSPATQKNLAKTHAT*SRRI*MALSKMPAKNP*SSAT 199 +SSP+ QK +A +HAT SRR + S++ ++ S T Sbjct: 3660 RSSPSPQKTMAPSHATSSRRSMIECSRLMSRRSWSGRT 3773
>LOC_Os03g30050:12003.t02615:unspliced-genomic protein kinase, putative| Length = 774 Score = 32.7 bits (65), Expect = 8.5 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = -2 / +1 Query: 1388 SILIGSCESSNLSSKCGYISERSRSVKVS 1302 SIL G C S N S KCG + R KVS Sbjct: 466 SILPGVCVSDNSSCKCGLFPDSGRFCKVS 552
>LOC_Os01g66420:12001.t06003:unspliced-genomic PHD finger protein, putative, expressed| Length = 4715 Score = 32.7 bits (65), Expect = 8.5 Identities = 14/36 (38%), Positives = 23/36 (63%) Frame = +2 / -3 Query: 875 ISLLETAVEALLISFQLSWRS*KD*FPMKLTWKQEL 982 I++++T + ++L + Q RS* FP KLTW E+ Sbjct: 2061 IAVVQTEIYSILANLQ*LVRS*VQKFPAKLTWNHEI 1954
>LOC_Os01g74650:12001.t06743:unspliced-genomic cysteine synthase, mitochondrial precursor, putative, expressed| Length = 6572 Score = 32.7 bits (65), Expect = 8.5 Identities = 12/34 (35%), Positives = 23/34 (67%) Frame = -1 / +2 Query: 1749 LQRYFPMLIYFVINYLLTHLTNTLIHFIIIVCLF 1648 +Q+ + ++IYFV++ +TH T ++I+ I I F Sbjct: 1637 IQKIYVIIIYFVMSCFITHSTLSVIYIIYICIKF 1738
>LOC_Os01g66850:12001.t06044:unspliced-genomic carboxylic ester hydrolase, putative, expressed| Length = 3167 Score = 32.7 bits (65), Expect = 8.5 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -1 / +1 Query: 1713 INYLLTHLTNTLIHFIIIVCLFHCLL 1636 I ++ H + L+H I+ VCL HC L Sbjct: 3058 ILHISVHRLHILLHMIVAVCLLHCYL 3135
>LOC_Os03g49520:12003.t04300:unspliced-genomic pinin/SDK/memA/ protein conserved region containing protein,| expressed Length = 3915 Score = 31.3 bits (62), Expect(2) = 8.5 Identities = 14/27 (51%), Positives = 14/27 (51%) Frame = -1 / +1 Query: 468 FKKISHQSW*SFDFFLIENLDQNWNRE 388 FK ISH W S DF L D WN E Sbjct: 1753 FKVISHILWSSLDFILAIRSDVAWNIE 1833 Score = 24.4 bits (47), Expect(2) = 8.5 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = -3 / +2 Query: 175 CRHFRQGHLN 146 CRHF+ G+LN Sbjct: 3308 CRHFKNGNLN 3337
>LOC_Os12g29350:12012.t02644:unspliced-genomic DNA binding protein, putative, expressed| Length = 9853 Score = 24.9 bits (48), Expect(2) = 9.3 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -1 / +2 Query: 1638 LN*TNQLLAYLGILLLWQRISCLLE 1564 L * ++L L +L++Q+I+CLLE Sbjct: 5834 LL*LERILGDLKSILIYQQITCLLE 5908 Score = 24.4 bits (47), Expect(2) = 9.3 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = -1 / +2 Query: 1731 MLIYFVINYLLTHLTNTLIHFIIIVCLFHCL 1639 +L+ +++ TNTL+ + CL CL Sbjct: 5669 LLLLTATSFITHMQTNTLLRGALSTCLMQCL 5761 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 640,391,727 Number of extensions: 9472594 Number of successful extensions: 30800 Number of sequences better than 10.0: 30 Length of query: 606 Length of database: 55,613,886 Length adjustment: 51 Effective length of query: 555 Effective length of database: 52,743,708 Effective search space: 29272757940 Effective search space used: 29272757940 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)