>Q86Y56:HEAT2_HUMAN HEAT repeat-containing protein 2 - Homo sapiens (Human)|
          Length = 855
 Score =  145 bits (365), Expect = 7e-34
 Identities = 115/522 (22%), Positives = 235/522 (45%), Gaps = 9/522 (1%)
 Frame = +1

Query: 100  YTEKPSENSRYLIKKNLNGLVENACKESLEFSNNVFVKVKALSQLRHIIVLADKEIQKHL 279
            +  +P    R L+ +NL+ ++   C +  ++   V  +VK+   L  +++ A+    +HL
Sbjct: 341  HERRPVLGCRELVFRNLSKILPALCHDITDWV--VGTRVKSAQLLPVLLLHAEDHATQHL 398

Query: 280  DHILRAVIRLYHKEDKQIDAQIVIVCELLGVYVDCGFSXXXXXXXXXXXXXXTSPRLVGN 459
            + +LR + +    E+  +        EL+G +V                    +P   G 
Sbjct: 399  EVVLRTLFQACTDEEAAVVQSCTRSAELVGTFVS-----PEVFLKLILSTLKKTPSASGL 453

Query: 460  LLELSSYLICNETQSSIQHEISLIAKIIEDVENLYNDNAEVMLSGFYL-VAALISVAGDL 636
            L+  S+   C   + ++Q  ++ IA  +           ++ L    L V AL+SV  + 
Sbjct: 454  LVLASAMRGC--PREALQPHLAAIATELAQAHICQASENDLYLERLLLCVQALVSVCHED 511

Query: 637  CSHYRSQLFSYLLTCQSITSVQTQLNNKVENYLELLARHSGCNGIKELYSVEVSAVLTGF 816
            C     QL   LLT  ++    T L +K +  ++ LA   G +  ++LY   +  +L   
Sbjct: 512  CGVASLQLLDVLLTIVALAGA-TGLRDKAQETMDSLAMVEGVSSCQDLYRKHIGPLLERV 570

Query: 817  YQTKSYKTWDRTSKDRFKFDILVRNCGRGLADFLPVILEIIEGLVSHEADLETRIDALSL 996
              T S+  W   S +  +F ++V   G  L + LP ++  +   +    D + R+   S+
Sbjct: 571  --TASHLDWTAHSPELLQFSVIVAQSGPALGEALPHVVPTLRACLQPSQDPQMRLKLFSI 628

Query: 997  IE-FLIKLDEMVD---QMRNHALGIMTKILIPAAVWKAGKPLIKIRKASIICMVLLIQRQ 1164
            +   L++  + ++   Q  ++   +   IL P   W AG+    IR A++ C+  L   +
Sbjct: 629  LSTVLLRATDTINSQGQFPSYLETVTKDILAPNLQWHAGRTAAAIRTAAVSCLWALTSSE 688

Query: 1165 IVSEEVLQECVKDIKPVLKNCLNDDWAPDLRFISCQLLDHIFKHLRETLTDLDLSDMYPH 1344
            ++S E +++  + + P +   L +D +   R ISC++++   K          L  +YP 
Sbjct: 689  VLSAEQIRDVQETLMPQVLTTLEED-SKMTRLISCRIINTFLKTSGGMTDPEKLIKIYPE 747

Query: 1345 LLERLDDSQDPIRIEITKAIQNFFQCTQLKMSPGTFE----YVVRGILIHLDDQNEQLQL 1512
            LL+RLDD  + +R+     +  + QC +   +   ++    Y+ R +L+HLDD    +Q 
Sbjct: 748  LLKRLDDVSNDVRMAAASTLVTWLQCVKGANAKSYYQSSVQYLYRELLVHLDDPERAIQD 807

Query: 1513 AIFKALQTAAYIKPRLVLKEARNSLPKQKYPKVCQELIRSIE 1638
            AI + L+  + + P L+++E    + K +    C++L++ ++
Sbjct: 808  AILEVLKEGSGLFPDLLVRETEAVIHKHRSATYCEQLLQHVQ 849

>O74424:NU211_SCHPO Nucleoporin nup211 - Schizosaccharomyces pombe (Fission yeast)|
          Length = 1837

 Score = 35.4 bits (80), Expect = 0.80
 Identities = 28/127 (22%), Positives = 63/127 (49%), Gaps = 4/127 (3%)
 Frame = +1

Query: 466  ELSSYLICNETQSSIQHEISLIAKIIEDVENLYNDNAEVMLSGFYLVAALISVAGDLCSH 645
            E SS  +  + + +++ + S ++   +D E + +D   V+ S    +    S+  +  S+
Sbjct: 1027 ESSSKELAKQLEDAVREKDSALS-FKKDYEKIRSDADRVITSLKEDIEKERSLMKECHSN 1085

Query: 646  YRSQLFSYLLTCQSITSVQTQLNNKVENYLELLA----RHSGCNGIKELYSVEVSAVLTG 813
            Y S++ S+  T Q +  ++T+ +     YL+L A    +HSG +G ++ ++++  A+   
Sbjct: 1086 YESEIVSHGRTTQKLRDLRTEFDEVNTKYLKLKANFEQQHSGLSGAEKDWNIQRKAMEDE 1145

Query: 814  FYQTKSY 834
                K Y
Sbjct: 1146 ISSLKDY 1152

>Q9PM37:PRIM_CAMJE DNA primase - Campylobacter jejuni|
          Length = 605

 Score = 33.1 bits (74), Expect = 4.0
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +1

Query: 136 IKKNLN--GLVENACKESLEFSNNVFVKVKALSQLRHIIVLADKEIQKHLDHILRAVIRL 309
           I+KNLN    +   CK +L F NNV +K   L+  + +  L DK +   + ++  A +  
Sbjct: 496 IRKNLNYSEFLLGICKVNLAFLNNVKIKNSTLALKKQLFTLIDKNLNLLIKNLNTAELNN 555

Query: 310 YHKE 321
           + KE
Sbjct: 556 FLKE 559

>P57404:KPYK_BUCAI Pyruvate kinase - Buchnera aphidicola subsp. Acyrthosiphon pisum|
           (Acyrthosiphon pisum symbiotic bacterium)
          Length = 480

 Score = 32.3 bits (72), Expect = 6.8
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -1

Query: 432 DFFLIE-NLDQNWNRESTVNIDTK*LTYDNNLGINLLV 322
           DFF+++ NLDQN   +  V ID K L YD  +G  LL+
Sbjct: 92  DFFILDANLDQNNGNQERVGIDYKQLPYDLKVGDVLLL 129

>P44606:DUSC_HAEIN tRNA-dihydrouridine synthase C - Haemophilus influenzae|
          Length = 310

 Score = 32.3 bits (72), Expect = 6.8
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
 Frame = +1

Query: 475 SYLICNETQSSIQHEISLIAKIIEDVENLYNDNAEVMLSGFYLVAALISVAGDLCSHYR- 651
           S+++ +  +    +EI  I +   +VEN Y+       SGFY VA +      L   Y  
Sbjct: 234 SHVLKSNAEKMPWYEIQKILQKYANVENEYD-------SGFYHVARIKQWLRYLNKEYNE 286

Query: 652 -SQLFSYLLTCQSITSVQTQLNNK 720
            +Q+F  + TCQ+   ++ +LN K
Sbjct: 287 ANQVFDKIKTCQTAEDLKLRLNEK 310


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 282,488,725
Number of extensions: 5679799
Number of successful extensions: 14323
Number of sequences better than 10.0: 5
Number of HSP's gapped: 14319
Number of HSP's successfully gapped: 5
Length of query: 606
Length of database: 100,686,439
Length adjustment: 119
Effective length of query: 487
Effective length of database: 68,045,334
Effective search space: 33138077658
Effective search space used: 33138077658
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)