ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf61j23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001074068.1| Oryza sativa (japonica cultivar-group) Os11g0225100 (Os11g0225100) mRNA, complete cds Length = 3711 Score = 490 bits (247), Expect = e-134 Identities = 895/1111 (80%) Strand = Plus / Plus Query: 1121 ttgatttatcacttgtccggtctctagcaatcttcgggaaggcaagtcaaactgtattgg 1180 |||||||||||||||| |||||||| | | |||| ||| ||||| || ||||||||| | Sbjct: 1947 ttgatttatcacttgtacggtctctggtagtctttggggaggcaggtacaactgtattag 2006 Query: 1181 acctcagcaagtaccatcttctgcgagtattggatcttgaaaaatgtgaggagttgaagg 1240 || |||||||||| || | |||||||| || ||||||||||||||||| || ||||| | Sbjct: 2007 acttcagcaagtatcaattgctgcgagttttagatcttgaaaaatgtgatgatttgaacg 2066 Query: 1241 atgatcatgtcaaagacatatgcaacctgctgcttctgaaatatctgagccttggaggtg 1300 |||||||| ||||||| |||||||| ||| ||||||||||||||||||||||||| ||| Sbjct: 2067 atgatcatctcaaagaaatatgcaatctggtgcttctgaaatatctgagccttgggggta 2126 Query: 1301 gtgttaccacaattccaagagatattgttaaactgaaacatttggtatcacttgatgtaa 1360 | | ||| | |||||| ||||||| ||| ||||| |||||| |||| ||||||| Sbjct: 2127 atatctccaaacttccaaaggatattgccaaattgaaagatttggaggcactcgatgtaa 2186 Query: 1361 ggagaacaaagatacagatactgcatgtagaagtcttccagttgccgtctttaattcact 1420 ||||| | || || ||||| ||| |||||||||||| |||||| | ||||||| Sbjct: 2187 ggagatcgaaagtaaagataatgccggtagaagtcttcgggttgccatgcctaattcatc 2246 Query: 1421 tatttgggaagtttaagcttacagatatggtcaagccaaaaagtgaagtacatgagtttc 1480 | |||| || |||||||| |||||| ||||||| || | |||||| || ||||||| Sbjct: 2247 tgcttggaaaatttaagctctcagataaagtcaagcagaagactgaagtgcaagagtttc 2306 Query: 1481 tctccaaaggaaaaagtaacttagaaacgctagcaggatttgttactgacggaagtggag 1540 |||| ||||||||||| ||||| | |||||||||||||||| || ||||||| | || Sbjct: 2307 tctcgaaaggaaaaagcaacttgcagacgctagcaggatttgctagcaacggaagcgaag 2366 Query: 1541 ggttcctgcatcttatgtgttatatgaataaactgagcaaggtgaagatttcgtgtgagt 1600 |||| |||||||||||| | || |||||||| |||| ||| ||||||||| |||| || Sbjct: 2367 ggtttctgcatcttatgaggtacatgaataagttgagaaagttgaagatttggtgtacgt 2426 Query: 1601 cgcctgcaggctgcgctgaccgaactcatcttaaggaggtcattcagcagttcattgagg 1660 || ||||||| || | || | ||| |||||| ||||| |||||| ||||||||| || Sbjct: 2427 cgtctgcaggtagcaccgattggactgatcttagggaggccattcaacagttcattctgg 2486 Query: 1661 atgaaaagcaggcaaatgttggttctcgctctttatcgcttcatttcagcaaatgctgtg 1720 |||||||| | |||||| ||||| | || ||||||||||||||||||| ||||| || Sbjct: 2487 atgaaaaggaagcaaatattggtacccgttctttatcgcttcatttcactggatgctctg 2546 Query: 1721 aagagctcctgaattccttaaaaggaccctgctacctcagctcactgaaattgcacggtg 1780 |||| | ||||||||||||| |||||||||||||||||| ||||||| || || Sbjct: 2547 aagatgcgataaattccttaaaagaaccctgctacctcagctcgttgaaattacatggca 2606 Query: 1781 acttggctgcactacctcagtttgttgtgtcacttcggggcctcagggagttatgccttt 1840 |||| | | | |||||||||||| |||||||| || |||| |||| | ||||||| Sbjct: 2607 acttcccccaattgcctcagtttgttacatcacttcgtggtctcaaggagctttgccttt 2666 Query: 1841 cgtctactaaattgacaaccggtgttcttgaagctttgagtaatttgaactacctgcagt 1900 | ||||||||||| ||||| || |||||||||| ||||||||||||| |||| |||||| Sbjct: 2667 catctactaaatttacaacaggccttcttgaagccttgagtaatttgagctacttgcagt 2726 Query: 1901 acttgaaactggttgctcatgatctcgagaagttcatcgcaagagaccgggcgttctgca 1960 | | ||||||||||| |||| || |||||||||||| || || | || |||| || Sbjct: 2727 atctcaaactggttgccgatgaacttgagaagttcatcataaaagttcaggggttcccca 2786 Query: 1961 ggcttctacgcctttctttggaactgcaatgtccaactttccccacaatagaagaagggg 2020 |||| ||| |||||| | | | || ||||||||||| ||||| ||| |||||||| | Sbjct: 2787 ggctgctatgcctttgtattgtgctacaatgtccaacattcccagtaattgaagaaggag 2846 Query: 2021 cgctgccattccttgtcacactccagctgctctgtaaagatctacatggcctttctgacc 2080 | |||||||| ||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 2847 ctctgccatttcttgtcacacttcagctgctatgcaaagatctacatggcctttctgaca 2906 Query: 2081 tcaaaatagaatatctcaaacatctcaaggaggtcactcttgaccctagagtcactccaa 2140 ||||||| |||| | | |||||||| ||||||| |||||| | || ||||||||||| Sbjct: 2907 tcaaaattgaatgttttaaacatcttcaggaggtaactcttcattctggagtcactccag 2966 Query: 2141 caacaagaggagaatgggagaaggctgctagggggcatccgaacaggccaaaagttttgc 2200 | |||||| ||||||| |||||||||| || ||||||||| ||||||||||| |||| Sbjct: 2967 ctacaagacaggaatgggtaaaggctgctaaggagcatccgaataggccaaaagtattgc 3026 Query: 2201 tgctcaaatctgttgatgcagcacaaagtga 2231 | ||||||||||||||| ||||| ||||||| Sbjct: 3027 ttctcaaatctgttgatacagcagaaagtga 3057 Score = 343 bits (173), Expect = 2e-90 Identities = 473/573 (82%) Strand = Plus / Plus Query: 285 acaacagctggtgaagaagagatatttcattgtgatcgatgacattcgaacagaagatca 344 ||||||| ||| ||||||||| || |||||||| ||||||||||||| |||||||||||| Sbjct: 1111 acaacagttggagaagaagaggtacttcattgttatcgatgacattcaaacagaagatca 1170 Query: 345 gtggaaaaccatcaaatctgccttgccagcagataagggtattagcagcagaatactggt 404 |||||||| ||||||||| || || || | ||||||| |||| ||||||||||| |||| Sbjct: 1171 gtggaaaagcatcaaatcggcttttccgactgataaggatattggcagcagaatagtggt 1230 Query: 405 gacgacaactattcagtcagtagctaatgcctgcagttctagtaatggctatgttcacaa 464 ||||| || || ||||||||||||||||||||| ||||| ||||| ||| | ||||| Sbjct: 1231 cacgacgaccatccagtcagtagctaatgcctgctgttctgcgaatgggtatttgcacaa 1290 Query: 465 gatgagcagacttgataaaatatgctcgaaacagttgttcaccaagaaagcttgtccaga 524 |||||||| |||||||| | ||||| || || ||||| ||||||||||||| ||||| Sbjct: 1291 aatgagcaggcttgataagaactgctcaaagcaattgttgtccaagaaagcttgcccaga 1350 Query: 525 caaatattcatgttacaagcagcctgatccagcagaagttttgaagaaatgtgacggcca 584 | |||||| |||||||||||| ||| |||||| | |||||||||||||||| ||||| Sbjct: 1351 gaggtattcacattacaagcagccagattcagcagcaattttgaagaaatgtgatggcca 1410 Query: 585 acctcttgcgctggtgacaataggtgaattcttgcaagcaaagggttggccaacaggacc 644 || ||||| || || || |||||||||||| ||||||| || || |||||||| || || Sbjct: 1411 gccacttgctcttgttaccataggtgaattcctgcaagctaatggctggccaacggggcc 1470 Query: 645 tagctgtgaagatatctgcacccagataggttatcacctggagaatgacaagagctttga 704 || |||||||||| |||||| | | || ||||||||| |||||||| || | |||| Sbjct: 1471 taactgtgaagatctctgcaatcggctacattatcacctagagaatgataaaacacttga 1530 Query: 705 aaaaatgcgaggtgtgctgattcataactacaccactctgcctagccatgctctcaaagc 764 || ||||| | |||||| | | |||||||| | ||| ||| ||||||||||||| || Sbjct: 1531 aaggatgcggcgagtgctggtccgcaactacactagtctacctggccatgctctcaaggc 1590 Query: 765 ctgcttgctatatttcggtatgttcccaagtaatcgtcccatcaggaagaaaagtctttt 824 |||||| |||||||| |||||||||||| | ||| ||| ||||||| ||||||||| || Sbjct: 1591 ctgcttactatattttggtatgttcccatctgatcatccaatcaggaggaaaagtctgtt 1650 Query: 825 gagacgatggcttgctgagggatttgtagaacc 857 ||| |||||||| || ||||||||||||||||| Sbjct: 1651 gaggcgatggctggccgagggatttgtagaacc 1683 Score = 129 bits (65), Expect = 6e-26 Identities = 146/173 (84%) Strand = Plus / Plus Query: 13 gagcagctggctgaggggcagcccagccggctgaaggtgatcgccgtcgtcgggttttgc 72 ||||||||||| ||| ||||||| | ||| |||||||||||| |||||||||| ||| Sbjct: 862 gagcagctggcggagcggcagccggagcagctcaaggtgatcgccatcgtcgggttctgc 921 Query: 73 ggcttggggaagaccgccctcgccgcggaagtgtacaacagagaaacccgcagcgagaga 132 || ||||||||||||||||||||||||| | ||||||| |||| |||||| ||| |||| Sbjct: 922 gggctggggaagaccgccctcgccgcggaggcgtacaaccgagagacccgcggcgggaga 981 Query: 133 tttgagaagcacgcgtgggtttatgcggcgctcaggagcccacgggaggtgct 185 || |||| |||||||||||||| || |||| | |||| ||||||||||||| Sbjct: 982 ttcgagaggcacgcgtgggtttgcgccgcgcaccggagtgcacgggaggtgct 1034 Score = 105 bits (53), Expect = 8e-19 Identities = 140/169 (82%) Strand = Plus / Plus Query: 916 aacatcattgagccaatcaacttgagcaacaatgataatgtgaagacttgtcaaacatat 975 ||||| |||||||| ||||| | ||||| |||||||| || ||||| || ||||| || Sbjct: 1742 aacattattgagcccatcaatgtaagcaataatgataaagtcaagacatgccaaacgtac 1801 Query: 976 ggcatgatgcgtgagttcattttgcacatgtccatctctcagaacttcgttaccttgttt 1035 || ||||||||||| ||||| | ||| ||||| |||||||||||||| || ||||| || Sbjct: 1802 ggtatgatgcgtgaattcatatcgcatatgtcaatctctcagaactttgtcacctttttc 1861 Query: 1036 tgcaatgacaagatagagcccaaatacgttcgtcggctttctctccatg 1084 || |||||||| | ||||||||| |||||||||||||||||||||| Sbjct: 1862 tgtgatgacaagttcctgcccaaatatgttcgtcggctttctctccatg 1910
>gb|AC133005.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C16, complete sequence Length = 137872 Score = 490 bits (247), Expect = e-134 Identities = 895/1111 (80%) Strand = Plus / Minus Query: 1121 ttgatttatcacttgtccggtctctagcaatcttcgggaaggcaagtcaaactgtattgg 1180 |||||||||||||||| |||||||| | | |||| ||| ||||| || ||||||||| | Sbjct: 137263 ttgatttatcacttgtacggtctctggtagtctttggggaggcaggtacaactgtattag 137204 Query: 1181 acctcagcaagtaccatcttctgcgagtattggatcttgaaaaatgtgaggagttgaagg 1240 || |||||||||| || | |||||||| || ||||||||||||||||| || ||||| | Sbjct: 137203 acttcagcaagtatcaattgctgcgagttttagatcttgaaaaatgtgatgatttgaacg 137144 Query: 1241 atgatcatgtcaaagacatatgcaacctgctgcttctgaaatatctgagccttggaggtg 1300 |||||||| ||||||| |||||||| ||| ||||||||||||||||||||||||| ||| Sbjct: 137143 atgatcatctcaaagaaatatgcaatctggtgcttctgaaatatctgagccttgggggta 137084 Query: 1301 gtgttaccacaattccaagagatattgttaaactgaaacatttggtatcacttgatgtaa 1360 | | ||| | |||||| ||||||| ||| ||||| |||||| |||| ||||||| Sbjct: 137083 atatctccaaacttccaaaggatattgccaaattgaaagatttggaggcactcgatgtaa 137024 Query: 1361 ggagaacaaagatacagatactgcatgtagaagtcttccagttgccgtctttaattcact 1420 ||||| | || || ||||| ||| |||||||||||| |||||| | ||||||| Sbjct: 137023 ggagatcgaaagtaaagataatgccggtagaagtcttcgggttgccatgcctaattcatc 136964 Query: 1421 tatttgggaagtttaagcttacagatatggtcaagccaaaaagtgaagtacatgagtttc 1480 | |||| || |||||||| |||||| ||||||| || | |||||| || ||||||| Sbjct: 136963 tgcttggaaaatttaagctctcagataaagtcaagcagaagactgaagtgcaagagtttc 136904 Query: 1481 tctccaaaggaaaaagtaacttagaaacgctagcaggatttgttactgacggaagtggag 1540 |||| ||||||||||| ||||| | |||||||||||||||| || ||||||| | || Sbjct: 136903 tctcgaaaggaaaaagcaacttgcagacgctagcaggatttgctagcaacggaagcgaag 136844 Query: 1541 ggttcctgcatcttatgtgttatatgaataaactgagcaaggtgaagatttcgtgtgagt 1600 |||| |||||||||||| | || |||||||| |||| ||| ||||||||| |||| || Sbjct: 136843 ggtttctgcatcttatgaggtacatgaataagttgagaaagttgaagatttggtgtacgt 136784 Query: 1601 cgcctgcaggctgcgctgaccgaactcatcttaaggaggtcattcagcagttcattgagg 1660 || ||||||| || | || | ||| |||||| ||||| |||||| ||||||||| || Sbjct: 136783 cgtctgcaggtagcaccgattggactgatcttagggaggccattcaacagttcattctgg 136724 Query: 1661 atgaaaagcaggcaaatgttggttctcgctctttatcgcttcatttcagcaaatgctgtg 1720 |||||||| | |||||| ||||| | || ||||||||||||||||||| ||||| || Sbjct: 136723 atgaaaaggaagcaaatattggtacccgttctttatcgcttcatttcactggatgctctg 136664 Query: 1721 aagagctcctgaattccttaaaaggaccctgctacctcagctcactgaaattgcacggtg 1780 |||| | ||||||||||||| |||||||||||||||||| ||||||| || || Sbjct: 136663 aagatgcgataaattccttaaaagaaccctgctacctcagctcgttgaaattacatggca 136604 Query: 1781 acttggctgcactacctcagtttgttgtgtcacttcggggcctcagggagttatgccttt 1840 |||| | | | |||||||||||| |||||||| || |||| |||| | ||||||| Sbjct: 136603 acttcccccaattgcctcagtttgttacatcacttcgtggtctcaaggagctttgccttt 136544 Query: 1841 cgtctactaaattgacaaccggtgttcttgaagctttgagtaatttgaactacctgcagt 1900 | ||||||||||| ||||| || |||||||||| ||||||||||||| |||| |||||| Sbjct: 136543 catctactaaatttacaacaggccttcttgaagccttgagtaatttgagctacttgcagt 136484 Query: 1901 acttgaaactggttgctcatgatctcgagaagttcatcgcaagagaccgggcgttctgca 1960 | | ||||||||||| |||| || |||||||||||| || || | || |||| || Sbjct: 136483 atctcaaactggttgccgatgaacttgagaagttcatcataaaagttcaggggttcccca 136424 Query: 1961 ggcttctacgcctttctttggaactgcaatgtccaactttccccacaatagaagaagggg 2020 |||| ||| |||||| | | | || ||||||||||| ||||| ||| |||||||| | Sbjct: 136423 ggctgctatgcctttgtattgtgctacaatgtccaacattcccagtaattgaagaaggag 136364 Query: 2021 cgctgccattccttgtcacactccagctgctctgtaaagatctacatggcctttctgacc 2080 | |||||||| ||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 136363 ctctgccatttcttgtcacacttcagctgctatgcaaagatctacatggcctttctgaca 136304 Query: 2081 tcaaaatagaatatctcaaacatctcaaggaggtcactcttgaccctagagtcactccaa 2140 ||||||| |||| | | |||||||| ||||||| |||||| | || ||||||||||| Sbjct: 136303 tcaaaattgaatgttttaaacatcttcaggaggtaactcttcattctggagtcactccag 136244 Query: 2141 caacaagaggagaatgggagaaggctgctagggggcatccgaacaggccaaaagttttgc 2200 | |||||| ||||||| |||||||||| || ||||||||| ||||||||||| |||| Sbjct: 136243 ctacaagacaggaatgggtaaaggctgctaaggagcatccgaataggccaaaagtattgc 136184 Query: 2201 tgctcaaatctgttgatgcagcacaaagtga 2231 | ||||||||||||||| ||||| ||||||| Sbjct: 136183 ttctcaaatctgttgatacagcagaaagtga 136153 Score = 186 bits (94), Expect = 3e-43 Identities = 283/346 (81%) Strand = Plus / Minus Query: 512 aagcttgtccagacaaatattcatgttacaagcagcctgatccagcagaagttttgaaga 571 ||||||| ||||| | |||||| |||||||||||| ||| |||||| | ||||||||| Sbjct: 137872 aagcttgcccagagaggtattcacattacaagcagccagattcagcagcaattttgaaga 137813 Query: 572 aatgtgacggccaacctcttgcgctggtgacaataggtgaattcttgcaagcaaagggtt 631 ||||||| ||||| || ||||| || || || |||||||||||| ||||||| || || | Sbjct: 137812 aatgtgatggccagccacttgctcttgttaccataggtgaattcctgcaagctaatggct 137753 Query: 632 ggccaacaggacctagctgtgaagatatctgcacccagataggttatcacctggagaatg 691 ||||||| || |||| |||||||||| |||||| | | || ||||||||| ||||||| Sbjct: 137752 ggccaacggggcctaactgtgaagatctctgcaatcggctacattatcacctagagaatg 137693 Query: 692 acaagagctttgaaaaaatgcgaggtgtgctgattcataactacaccactctgcctagcc 751 | || | |||||| ||||| | |||||| | | |||||||| | ||| ||| ||| Sbjct: 137692 ataaaacacttgaaaggatgcggcgagtgctggtccgcaactacactagtctacctggcc 137633 Query: 752 atgctctcaaagcctgcttgctatatttcggtatgttcccaagtaatcgtcccatcagga 811 |||||||||| |||||||| |||||||| |||||||||||| | ||| ||| ||||||| Sbjct: 137632 atgctctcaaggcctgcttactatattttggtatgttcccatctgatcatccaatcagga 137573 Query: 812 agaaaagtcttttgagacgatggcttgctgagggatttgtagaacc 857 ||||||||| ||||| |||||||| || ||||||||||||||||| Sbjct: 137572 ggaaaagtctgttgaggcgatggctggccgagggatttgtagaacc 137527 Score = 105 bits (53), Expect = 8e-19 Identities = 140/169 (82%) Strand = Plus / Minus Query: 916 aacatcattgagccaatcaacttgagcaacaatgataatgtgaagacttgtcaaacatat 975 ||||| |||||||| ||||| | ||||| |||||||| || ||||| || ||||| || Sbjct: 137468 aacattattgagcccatcaatgtaagcaataatgataaagtcaagacatgccaaacgtac 137409 Query: 976 ggcatgatgcgtgagttcattttgcacatgtccatctctcagaacttcgttaccttgttt 1035 || ||||||||||| ||||| | ||| ||||| |||||||||||||| || ||||| || Sbjct: 137408 ggtatgatgcgtgaattcatatcgcatatgtcaatctctcagaactttgtcacctttttc 137349 Query: 1036 tgcaatgacaagatagagcccaaatacgttcgtcggctttctctccatg 1084 || |||||||| | ||||||||| |||||||||||||||||||||| Sbjct: 137348 tgtgatgacaagttcctgcccaaatatgttcgtcggctttctctccatg 137300
>gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0073N20 BAC genomic sequence, complete sequence Length = 147289 Score = 490 bits (247), Expect = e-134 Identities = 895/1111 (80%) Strand = Plus / Plus Query: 1121 ttgatttatcacttgtccggtctctagcaatcttcgggaaggcaagtcaaactgtattgg 1180 |||||||||||||||| |||||||| | | |||| ||| ||||| || ||||||||| | Sbjct: 78361 ttgatttatcacttgtacggtctctggtagtctttggggaggcaggtacaactgtattag 78420 Query: 1181 acctcagcaagtaccatcttctgcgagtattggatcttgaaaaatgtgaggagttgaagg 1240 || |||||||||| || | |||||||| || ||||||||||||||||| || ||||| | Sbjct: 78421 acttcagcaagtatcaattgctgcgagttttagatcttgaaaaatgtgatgatttgaacg 78480 Query: 1241 atgatcatgtcaaagacatatgcaacctgctgcttctgaaatatctgagccttggaggtg 1300 |||||||| ||||||| |||||||| ||| ||||||||||||||||||||||||| ||| Sbjct: 78481 atgatcatctcaaagaaatatgcaatctggtgcttctgaaatatctgagccttgggggta 78540 Query: 1301 gtgttaccacaattccaagagatattgttaaactgaaacatttggtatcacttgatgtaa 1360 | | ||| | |||||| ||||||| ||| ||||| |||||| |||| ||||||| Sbjct: 78541 atatctccaaacttccaaaggatattgccaaattgaaagatttggaggcactcgatgtaa 78600 Query: 1361 ggagaacaaagatacagatactgcatgtagaagtcttccagttgccgtctttaattcact 1420 ||||| | || || ||||| ||| |||||||||||| |||||| | ||||||| Sbjct: 78601 ggagatcgaaagtaaagataatgccggtagaagtcttcgggttgccatgcctaattcatc 78660 Query: 1421 tatttgggaagtttaagcttacagatatggtcaagccaaaaagtgaagtacatgagtttc 1480 | |||| || |||||||| |||||| ||||||| || | |||||| || ||||||| Sbjct: 78661 tgcttggaaaatttaagctctcagataaagtcaagcagaagactgaagtgcaagagtttc 78720 Query: 1481 tctccaaaggaaaaagtaacttagaaacgctagcaggatttgttactgacggaagtggag 1540 |||| ||||||||||| ||||| | |||||||||||||||| || ||||||| | || Sbjct: 78721 tctcgaaaggaaaaagcaacttgcagacgctagcaggatttgctagcaacggaagcgaag 78780 Query: 1541 ggttcctgcatcttatgtgttatatgaataaactgagcaaggtgaagatttcgtgtgagt 1600 |||| |||||||||||| | || |||||||| |||| ||| ||||||||| |||| || Sbjct: 78781 ggtttctgcatcttatgaggtacatgaataagttgagaaagttgaagatttggtgtacgt 78840 Query: 1601 cgcctgcaggctgcgctgaccgaactcatcttaaggaggtcattcagcagttcattgagg 1660 || ||||||| || | || | ||| |||||| ||||| |||||| ||||||||| || Sbjct: 78841 cgtctgcaggtagcaccgattggactgatcttagggaggccattcaacagttcattctgg 78900 Query: 1661 atgaaaagcaggcaaatgttggttctcgctctttatcgcttcatttcagcaaatgctgtg 1720 |||||||| | |||||| ||||| | || ||||||||||||||||||| ||||| || Sbjct: 78901 atgaaaaggaagcaaatattggtacccgttctttatcgcttcatttcactggatgctctg 78960 Query: 1721 aagagctcctgaattccttaaaaggaccctgctacctcagctcactgaaattgcacggtg 1780 |||| | ||||||||||||| |||||||||||||||||| ||||||| || || Sbjct: 78961 aagatgcgataaattccttaaaagaaccctgctacctcagctcgttgaaattacatggca 79020 Query: 1781 acttggctgcactacctcagtttgttgtgtcacttcggggcctcagggagttatgccttt 1840 |||| | | | |||||||||||| |||||||| || |||| |||| | ||||||| Sbjct: 79021 acttcccccaattgcctcagtttgttacatcacttcgtggtctcaaggagctttgccttt 79080 Query: 1841 cgtctactaaattgacaaccggtgttcttgaagctttgagtaatttgaactacctgcagt 1900 | ||||||||||| ||||| || |||||||||| ||||||||||||| |||| |||||| Sbjct: 79081 catctactaaatttacaacaggccttcttgaagccttgagtaatttgagctacttgcagt 79140 Query: 1901 acttgaaactggttgctcatgatctcgagaagttcatcgcaagagaccgggcgttctgca 1960 | | ||||||||||| |||| || |||||||||||| || || | || |||| || Sbjct: 79141 atctcaaactggttgccgatgaacttgagaagttcatcataaaagttcaggggttcccca 79200 Query: 1961 ggcttctacgcctttctttggaactgcaatgtccaactttccccacaatagaagaagggg 2020 |||| ||| |||||| | | | || ||||||||||| ||||| ||| |||||||| | Sbjct: 79201 ggctgctatgcctttgtattgtgctacaatgtccaacattcccagtaattgaagaaggag 79260 Query: 2021 cgctgccattccttgtcacactccagctgctctgtaaagatctacatggcctttctgacc 2080 | |||||||| ||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 79261 ctctgccatttcttgtcacacttcagctgctatgcaaagatctacatggcctttctgaca 79320 Query: 2081 tcaaaatagaatatctcaaacatctcaaggaggtcactcttgaccctagagtcactccaa 2140 ||||||| |||| | | |||||||| ||||||| |||||| | || ||||||||||| Sbjct: 79321 tcaaaattgaatgttttaaacatcttcaggaggtaactcttcattctggagtcactccag 79380 Query: 2141 caacaagaggagaatgggagaaggctgctagggggcatccgaacaggccaaaagttttgc 2200 | |||||| ||||||| |||||||||| || ||||||||| ||||||||||| |||| Sbjct: 79381 ctacaagacaggaatgggtaaaggctgctaaggagcatccgaataggccaaaagtattgc 79440 Query: 2201 tgctcaaatctgttgatgcagcacaaagtga 2231 | ||||||||||||||| ||||| ||||||| Sbjct: 79441 ttctcaaatctgttgatacagcagaaagtga 79471 Score = 325 bits (164), Expect = 5e-85 Identities = 452/548 (82%) Strand = Plus / Plus Query: 310 ttcattgtgatcgatgacattcgaacagaagatcagtggaaaaccatcaaatctgccttg 369 |||||||| ||||||||||||| |||||||||||||||||||| ||||||||| || || Sbjct: 77550 ttcattgttatcgatgacattcaaacagaagatcagtggaaaagcatcaaatcggctttt 77609 Query: 370 ccagcagataagggtattagcagcagaatactggtgacgacaactattcagtcagtagct 429 || | ||||||| |||| ||||||||||| |||| ||||| || || |||||||||||| Sbjct: 77610 ccgactgataaggatattggcagcagaatagtggtcacgacgaccatccagtcagtagct 77669 Query: 430 aatgcctgcagttctagtaatggctatgttcacaagatgagcagacttgataaaatatgc 489 ||||||||| ||||| ||||| ||| | ||||| |||||||| |||||||| | ||| Sbjct: 77670 aatgcctgctgttctgcgaatgggtatttgcacaaaatgagcaggcttgataagaactgc 77729 Query: 490 tcgaaacagttgttcaccaagaaagcttgtccagacaaatattcatgttacaagcagcct 549 || || || ||||| ||||||||||||| ||||| | |||||| |||||||||||| Sbjct: 77730 tcaaagcaattgttgtccaagaaagcttgcccagagaggtattcacattacaagcagcca 77789 Query: 550 gatccagcagaagttttgaagaaatgtgacggccaacctcttgcgctggtgacaataggt 609 ||| |||||| | |||||||||||||||| ||||| || ||||| || || || |||||| Sbjct: 77790 gattcagcagcaattttgaagaaatgtgatggccagccacttgctcttgttaccataggt 77849 Query: 610 gaattcttgcaagcaaagggttggccaacaggacctagctgtgaagatatctgcacccag 669 |||||| ||||||| || || |||||||| || |||| |||||||||| |||||| | | Sbjct: 77850 gaattcctgcaagctaatggctggccaacggggcctaactgtgaagatctctgcaatcgg 77909 Query: 670 ataggttatcacctggagaatgacaagagctttgaaaaaatgcgaggtgtgctgattcat 729 || ||||||||| |||||||| || | |||||| ||||| | |||||| | | Sbjct: 77910 ctacattatcacctagagaatgataaaacacttgaaaggatgcggcgagtgctggtccgc 77969 Query: 730 aactacaccactctgcctagccatgctctcaaagcctgcttgctatatttcggtatgttc 789 |||||||| | ||| ||| ||||||||||||| |||||||| |||||||| ||||||||| Sbjct: 77970 aactacactagtctacctggccatgctctcaaggcctgcttactatattttggtatgttc 78029 Query: 790 ccaagtaatcgtcccatcaggaagaaaagtcttttgagacgatggcttgctgagggattt 849 ||| | ||| ||| ||||||| ||||||||| ||||| |||||||| || ||||||||| Sbjct: 78030 ccatctgatcatccaatcaggaggaaaagtctgttgaggcgatggctggccgagggattt 78089 Query: 850 gtagaacc 857 |||||||| Sbjct: 78090 gtagaacc 78097 Score = 129 bits (65), Expect = 6e-26 Identities = 146/173 (84%) Strand = Plus / Plus Query: 13 gagcagctggctgaggggcagcccagccggctgaaggtgatcgccgtcgtcgggttttgc 72 ||||||||||| ||| ||||||| | ||| |||||||||||| |||||||||| ||| Sbjct: 76883 gagcagctggcggagcggcagccggagcagctcaaggtgatcgccatcgtcgggttctgc 76942 Query: 73 ggcttggggaagaccgccctcgccgcggaagtgtacaacagagaaacccgcagcgagaga 132 || ||||||||||||||||||||||||| | ||||||| |||| |||||| ||| |||| Sbjct: 76943 gggctggggaagaccgccctcgccgcggaggcgtacaaccgagagacccgcggcgggaga 77002 Query: 133 tttgagaagcacgcgtgggtttatgcggcgctcaggagcccacgggaggtgct 185 || |||| |||||||||||||| || |||| | |||| ||||||||||||| Sbjct: 77003 ttcgagaggcacgcgtgggtttgcgccgcgcaccggagtgcacgggaggtgct 77055 Score = 105 bits (53), Expect = 8e-19 Identities = 140/169 (82%) Strand = Plus / Plus Query: 916 aacatcattgagccaatcaacttgagcaacaatgataatgtgaagacttgtcaaacatat 975 ||||| |||||||| ||||| | ||||| |||||||| || ||||| || ||||| || Sbjct: 78156 aacattattgagcccatcaatgtaagcaataatgataaagtcaagacatgccaaacgtac 78215 Query: 976 ggcatgatgcgtgagttcattttgcacatgtccatctctcagaacttcgttaccttgttt 1035 || ||||||||||| ||||| | ||| ||||| |||||||||||||| || ||||| || Sbjct: 78216 ggtatgatgcgtgaattcatatcgcatatgtcaatctctcagaactttgtcacctttttc 78275 Query: 1036 tgcaatgacaagatagagcccaaatacgttcgtcggctttctctccatg 1084 || |||||||| | ||||||||| |||||||||||||||||||||| Sbjct: 78276 tgtgatgacaagttcctgcccaaatatgttcgtcggctttctctccatg 78324
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 490 bits (247), Expect = e-134 Identities = 895/1111 (80%) Strand = Plus / Minus Query: 1121 ttgatttatcacttgtccggtctctagcaatcttcgggaaggcaagtcaaactgtattgg 1180 |||||||||||||||| |||||||| | | |||| ||| ||||| || ||||||||| | Sbjct: 6465869 ttgatttatcacttgtacggtctctggtagtctttggggaggcaggtacaactgtattag 6465810 Query: 1181 acctcagcaagtaccatcttctgcgagtattggatcttgaaaaatgtgaggagttgaagg 1240 || |||||||||| || | |||||||| || ||||||||||||||||| || ||||| | Sbjct: 6465809 acttcagcaagtatcaattgctgcgagttttagatcttgaaaaatgtgatgatttgaacg 6465750 Query: 1241 atgatcatgtcaaagacatatgcaacctgctgcttctgaaatatctgagccttggaggtg 1300 |||||||| ||||||| |||||||| ||| ||||||||||||||||||||||||| ||| Sbjct: 6465749 atgatcatctcaaagaaatatgcaatctggtgcttctgaaatatctgagccttgggggta 6465690 Query: 1301 gtgttaccacaattccaagagatattgttaaactgaaacatttggtatcacttgatgtaa 1360 | | ||| | |||||| ||||||| ||| ||||| |||||| |||| ||||||| Sbjct: 6465689 atatctccaaacttccaaaggatattgccaaattgaaagatttggaggcactcgatgtaa 6465630 Query: 1361 ggagaacaaagatacagatactgcatgtagaagtcttccagttgccgtctttaattcact 1420 ||||| | || || ||||| ||| |||||||||||| |||||| | ||||||| Sbjct: 6465629 ggagatcgaaagtaaagataatgccggtagaagtcttcgggttgccatgcctaattcatc 6465570 Query: 1421 tatttgggaagtttaagcttacagatatggtcaagccaaaaagtgaagtacatgagtttc 1480 | |||| || |||||||| |||||| ||||||| || | |||||| || ||||||| Sbjct: 6465569 tgcttggaaaatttaagctctcagataaagtcaagcagaagactgaagtgcaagagtttc 6465510 Query: 1481 tctccaaaggaaaaagtaacttagaaacgctagcaggatttgttactgacggaagtggag 1540 |||| ||||||||||| ||||| | |||||||||||||||| || ||||||| | || Sbjct: 6465509 tctcgaaaggaaaaagcaacttgcagacgctagcaggatttgctagcaacggaagcgaag 6465450 Query: 1541 ggttcctgcatcttatgtgttatatgaataaactgagcaaggtgaagatttcgtgtgagt 1600 |||| |||||||||||| | || |||||||| |||| ||| ||||||||| |||| || Sbjct: 6465449 ggtttctgcatcttatgaggtacatgaataagttgagaaagttgaagatttggtgtacgt 6465390 Query: 1601 cgcctgcaggctgcgctgaccgaactcatcttaaggaggtcattcagcagttcattgagg 1660 || ||||||| || | || | ||| |||||| ||||| |||||| ||||||||| || Sbjct: 6465389 cgtctgcaggtagcaccgattggactgatcttagggaggccattcaacagttcattctgg 6465330 Query: 1661 atgaaaagcaggcaaatgttggttctcgctctttatcgcttcatttcagcaaatgctgtg 1720 |||||||| | |||||| ||||| | || ||||||||||||||||||| ||||| || Sbjct: 6465329 atgaaaaggaagcaaatattggtacccgttctttatcgcttcatttcactggatgctctg 6465270 Query: 1721 aagagctcctgaattccttaaaaggaccctgctacctcagctcactgaaattgcacggtg 1780 |||| | ||||||||||||| |||||||||||||||||| ||||||| || || Sbjct: 6465269 aagatgcgataaattccttaaaagaaccctgctacctcagctcgttgaaattacatggca 6465210 Query: 1781 acttggctgcactacctcagtttgttgtgtcacttcggggcctcagggagttatgccttt 1840 |||| | | | |||||||||||| |||||||| || |||| |||| | ||||||| Sbjct: 6465209 acttcccccaattgcctcagtttgttacatcacttcgtggtctcaaggagctttgccttt 6465150 Query: 1841 cgtctactaaattgacaaccggtgttcttgaagctttgagtaatttgaactacctgcagt 1900 | ||||||||||| ||||| || |||||||||| ||||||||||||| |||| |||||| Sbjct: 6465149 catctactaaatttacaacaggccttcttgaagccttgagtaatttgagctacttgcagt 6465090 Query: 1901 acttgaaactggttgctcatgatctcgagaagttcatcgcaagagaccgggcgttctgca 1960 | | ||||||||||| |||| || |||||||||||| || || | || |||| || Sbjct: 6465089 atctcaaactggttgccgatgaacttgagaagttcatcataaaagttcaggggttcccca 6465030 Query: 1961 ggcttctacgcctttctttggaactgcaatgtccaactttccccacaatagaagaagggg 2020 |||| ||| |||||| | | | || ||||||||||| ||||| ||| |||||||| | Sbjct: 6465029 ggctgctatgcctttgtattgtgctacaatgtccaacattcccagtaattgaagaaggag 6464970 Query: 2021 cgctgccattccttgtcacactccagctgctctgtaaagatctacatggcctttctgacc 2080 | |||||||| ||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 6464969 ctctgccatttcttgtcacacttcagctgctatgcaaagatctacatggcctttctgaca 6464910 Query: 2081 tcaaaatagaatatctcaaacatctcaaggaggtcactcttgaccctagagtcactccaa 2140 ||||||| |||| | | |||||||| ||||||| |||||| | || ||||||||||| Sbjct: 6464909 tcaaaattgaatgttttaaacatcttcaggaggtaactcttcattctggagtcactccag 6464850 Query: 2141 caacaagaggagaatgggagaaggctgctagggggcatccgaacaggccaaaagttttgc 2200 | |||||| ||||||| |||||||||| || ||||||||| ||||||||||| |||| Sbjct: 6464849 ctacaagacaggaatgggtaaaggctgctaaggagcatccgaataggccaaaagtattgc 6464790 Query: 2201 tgctcaaatctgttgatgcagcacaaagtga 2231 | ||||||||||||||| ||||| ||||||| Sbjct: 6464789 ttctcaaatctgttgatacagcagaaagtga 6464759 Score = 325 bits (164), Expect = 5e-85 Identities = 452/548 (82%) Strand = Plus / Minus Query: 310 ttcattgtgatcgatgacattcgaacagaagatcagtggaaaaccatcaaatctgccttg 369 |||||||| ||||||||||||| |||||||||||||||||||| ||||||||| || || Sbjct: 6466680 ttcattgttatcgatgacattcaaacagaagatcagtggaaaagcatcaaatcggctttt 6466621 Query: 370 ccagcagataagggtattagcagcagaatactggtgacgacaactattcagtcagtagct 429 || | ||||||| |||| ||||||||||| |||| ||||| || || |||||||||||| Sbjct: 6466620 ccgactgataaggatattggcagcagaatagtggtcacgacgaccatccagtcagtagct 6466561 Query: 430 aatgcctgcagttctagtaatggctatgttcacaagatgagcagacttgataaaatatgc 489 ||||||||| ||||| ||||| ||| | ||||| |||||||| |||||||| | ||| Sbjct: 6466560 aatgcctgctgttctgcgaatgggtatttgcacaaaatgagcaggcttgataagaactgc 6466501 Query: 490 tcgaaacagttgttcaccaagaaagcttgtccagacaaatattcatgttacaagcagcct 549 || || || ||||| ||||||||||||| ||||| | |||||| |||||||||||| Sbjct: 6466500 tcaaagcaattgttgtccaagaaagcttgcccagagaggtattcacattacaagcagcca 6466441 Query: 550 gatccagcagaagttttgaagaaatgtgacggccaacctcttgcgctggtgacaataggt 609 ||| |||||| | |||||||||||||||| ||||| || ||||| || || || |||||| Sbjct: 6466440 gattcagcagcaattttgaagaaatgtgatggccagccacttgctcttgttaccataggt 6466381 Query: 610 gaattcttgcaagcaaagggttggccaacaggacctagctgtgaagatatctgcacccag 669 |||||| ||||||| || || |||||||| || |||| |||||||||| |||||| | | Sbjct: 6466380 gaattcctgcaagctaatggctggccaacggggcctaactgtgaagatctctgcaatcgg 6466321 Query: 670 ataggttatcacctggagaatgacaagagctttgaaaaaatgcgaggtgtgctgattcat 729 || ||||||||| |||||||| || | |||||| ||||| | |||||| | | Sbjct: 6466320 ctacattatcacctagagaatgataaaacacttgaaaggatgcggcgagtgctggtccgc 6466261 Query: 730 aactacaccactctgcctagccatgctctcaaagcctgcttgctatatttcggtatgttc 789 |||||||| | ||| ||| ||||||||||||| |||||||| |||||||| ||||||||| Sbjct: 6466260 aactacactagtctacctggccatgctctcaaggcctgcttactatattttggtatgttc 6466201 Query: 790 ccaagtaatcgtcccatcaggaagaaaagtcttttgagacgatggcttgctgagggattt 849 ||| | ||| ||| ||||||| ||||||||| ||||| |||||||| || ||||||||| Sbjct: 6466200 ccatctgatcatccaatcaggaggaaaagtctgttgaggcgatggctggccgagggattt 6466141 Query: 850 gtagaacc 857 |||||||| Sbjct: 6466140 gtagaacc 6466133 Score = 129 bits (65), Expect = 6e-26 Identities = 146/173 (84%) Strand = Plus / Minus Query: 13 gagcagctggctgaggggcagcccagccggctgaaggtgatcgccgtcgtcgggttttgc 72 ||||||||||| ||| ||||||| | ||| |||||||||||| |||||||||| ||| Sbjct: 6467347 gagcagctggcggagcggcagccggagcagctcaaggtgatcgccatcgtcgggttctgc 6467288 Query: 73 ggcttggggaagaccgccctcgccgcggaagtgtacaacagagaaacccgcagcgagaga 132 || ||||||||||||||||||||||||| | ||||||| |||| |||||| ||| |||| Sbjct: 6467287 gggctggggaagaccgccctcgccgcggaggcgtacaaccgagagacccgcggcgggaga 6467228 Query: 133 tttgagaagcacgcgtgggtttatgcggcgctcaggagcccacgggaggtgct 185 || |||| |||||||||||||| || |||| | |||| ||||||||||||| Sbjct: 6467227 ttcgagaggcacgcgtgggtttgcgccgcgcaccggagtgcacgggaggtgct 6467175 Score = 105 bits (53), Expect = 8e-19 Identities = 140/169 (82%) Strand = Plus / Minus Query: 916 aacatcattgagccaatcaacttgagcaacaatgataatgtgaagacttgtcaaacatat 975 ||||| |||||||| ||||| | ||||| |||||||| || ||||| || ||||| || Sbjct: 6466074 aacattattgagcccatcaatgtaagcaataatgataaagtcaagacatgccaaacgtac 6466015 Query: 976 ggcatgatgcgtgagttcattttgcacatgtccatctctcagaacttcgttaccttgttt 1035 || ||||||||||| ||||| | ||| ||||| |||||||||||||| || ||||| || Sbjct: 6466014 ggtatgatgcgtgaattcatatcgcatatgtcaatctctcagaactttgtcacctttttc 6465955 Query: 1036 tgcaatgacaagatagagcccaaatacgttcgtcggctttctctccatg 1084 || |||||||| | ||||||||| |||||||||||||||||||||| Sbjct: 6465954 tgtgatgacaagttcctgcccaaatatgttcgtcggctttctctccatg 6465906 Score = 69.9 bits (35), Expect = 4e-08 Identities = 41/43 (95%) Strand = Plus / Plus Query: 749 gccatgctctcaaagcctgcttgctatatttcggtatgttccc 791 ||||||||||||||||||||||||||||||| || |||||||| Sbjct: 6546154 gccatgctctcaaagcctgcttgctatattttggcatgttccc 6546196 Score = 67.9 bits (34), Expect = 2e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 955 gtgaagacttgtcaaacatatggcatgatgcgtgagttcattttgc 1000 |||||||| |||||||| |||||||||||||| ||||||||||||| Sbjct: 6546363 gtgaagacatgtcaaacttatggcatgatgcgcgagttcattttgc 6546408 Score = 48.1 bits (24), Expect = 0.16 Identities = 48/56 (85%) Strand = Plus / Plus Query: 388 agcagcagaatactggtgacgacaactattcagtcagtagctaatgcctgcagttc 443 ||||| |||||| ||||||| ||||| | || ||||||||||| ||||||||||| Sbjct: 6545793 agcagtagaatagtggtgaccacaacagtgcaatcagtagctaaagcctgcagttc 6545848
>dbj|AK066950.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090P15, full insert sequence Length = 3712 Score = 490 bits (247), Expect = e-134 Identities = 895/1111 (80%) Strand = Plus / Plus Query: 1121 ttgatttatcacttgtccggtctctagcaatcttcgggaaggcaagtcaaactgtattgg 1180 |||||||||||||||| |||||||| | | |||| ||| ||||| || ||||||||| | Sbjct: 1947 ttgatttatcacttgtacggtctctggtagtctttggggaggcaggtacaactgtattag 2006 Query: 1181 acctcagcaagtaccatcttctgcgagtattggatcttgaaaaatgtgaggagttgaagg 1240 || |||||||||| || | |||||||| || ||||||||||||||||| || ||||| | Sbjct: 2007 acttcagcaagtatcaattgctgcgagttttagatcttgaaaaatgtgatgatttgaacg 2066 Query: 1241 atgatcatgtcaaagacatatgcaacctgctgcttctgaaatatctgagccttggaggtg 1300 |||||||| ||||||| |||||||| ||| ||||||||||||||||||||||||| ||| Sbjct: 2067 atgatcatctcaaagaaatatgcaatctggtgcttctgaaatatctgagccttgggggta 2126 Query: 1301 gtgttaccacaattccaagagatattgttaaactgaaacatttggtatcacttgatgtaa 1360 | | ||| | |||||| ||||||| ||| ||||| |||||| |||| ||||||| Sbjct: 2127 atatctccaaacttccaaaggatattgccaaattgaaagatttggaggcactcgatgtaa 2186 Query: 1361 ggagaacaaagatacagatactgcatgtagaagtcttccagttgccgtctttaattcact 1420 ||||| | || || ||||| ||| |||||||||||| |||||| | ||||||| Sbjct: 2187 ggagatcgaaagtaaagataatgccggtagaagtcttcgggttgccatgcctaattcatc 2246 Query: 1421 tatttgggaagtttaagcttacagatatggtcaagccaaaaagtgaagtacatgagtttc 1480 | |||| || |||||||| |||||| ||||||| || | |||||| || ||||||| Sbjct: 2247 tgcttggaaaatttaagctctcagataaagtcaagcagaagactgaagtgcaagagtttc 2306 Query: 1481 tctccaaaggaaaaagtaacttagaaacgctagcaggatttgttactgacggaagtggag 1540 |||| ||||||||||| ||||| | |||||||||||||||| || ||||||| | || Sbjct: 2307 tctcgaaaggaaaaagcaacttgcagacgctagcaggatttgctagcaacggaagcgaag 2366 Query: 1541 ggttcctgcatcttatgtgttatatgaataaactgagcaaggtgaagatttcgtgtgagt 1600 |||| |||||||||||| | || |||||||| |||| ||| ||||||||| |||| || Sbjct: 2367 ggtttctgcatcttatgaggtacatgaataagttgagaaagttgaagatttggtgtacgt 2426 Query: 1601 cgcctgcaggctgcgctgaccgaactcatcttaaggaggtcattcagcagttcattgagg 1660 || ||||||| || | || | ||| |||||| ||||| |||||| ||||||||| || Sbjct: 2427 cgtctgcaggtagcaccgattggactgatcttagggaggccattcaacagttcattctgg 2486 Query: 1661 atgaaaagcaggcaaatgttggttctcgctctttatcgcttcatttcagcaaatgctgtg 1720 |||||||| | |||||| ||||| | || ||||||||||||||||||| ||||| || Sbjct: 2487 atgaaaaggaagcaaatattggtacccgttctttatcgcttcatttcactggatgctctg 2546 Query: 1721 aagagctcctgaattccttaaaaggaccctgctacctcagctcactgaaattgcacggtg 1780 |||| | ||||||||||||| |||||||||||||||||| ||||||| || || Sbjct: 2547 aagatgcgataaattccttaaaagaaccctgctacctcagctcgttgaaattacatggca 2606 Query: 1781 acttggctgcactacctcagtttgttgtgtcacttcggggcctcagggagttatgccttt 1840 |||| | | | |||||||||||| |||||||| || |||| |||| | ||||||| Sbjct: 2607 acttcccccaattgcctcagtttgttacatcacttcgtggtctcaaggagctttgccttt 2666 Query: 1841 cgtctactaaattgacaaccggtgttcttgaagctttgagtaatttgaactacctgcagt 1900 | ||||||||||| ||||| || |||||||||| ||||||||||||| |||| |||||| Sbjct: 2667 catctactaaatttacaacaggccttcttgaagccttgagtaatttgagctacttgcagt 2726 Query: 1901 acttgaaactggttgctcatgatctcgagaagttcatcgcaagagaccgggcgttctgca 1960 | | ||||||||||| |||| || |||||||||||| || || | || |||| || Sbjct: 2727 atctcaaactggttgccgatgaacttgagaagttcatcataaaagttcaggggttcccca 2786 Query: 1961 ggcttctacgcctttctttggaactgcaatgtccaactttccccacaatagaagaagggg 2020 |||| ||| |||||| | | | || ||||||||||| ||||| ||| |||||||| | Sbjct: 2787 ggctgctatgcctttgtattgtgctacaatgtccaacattcccagtaattgaagaaggag 2846 Query: 2021 cgctgccattccttgtcacactccagctgctctgtaaagatctacatggcctttctgacc 2080 | |||||||| ||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 2847 ctctgccatttcttgtcacacttcagctgctatgcaaagatctacatggcctttctgaca 2906 Query: 2081 tcaaaatagaatatctcaaacatctcaaggaggtcactcttgaccctagagtcactccaa 2140 ||||||| |||| | | |||||||| ||||||| |||||| | || ||||||||||| Sbjct: 2907 tcaaaattgaatgttttaaacatcttcaggaggtaactcttcattctggagtcactccag 2966 Query: 2141 caacaagaggagaatgggagaaggctgctagggggcatccgaacaggccaaaagttttgc 2200 | |||||| ||||||| |||||||||| || ||||||||| ||||||||||| |||| Sbjct: 2967 ctacaagacaggaatgggtaaaggctgctaaggagcatccgaataggccaaaagtattgc 3026 Query: 2201 tgctcaaatctgttgatgcagcacaaagtga 2231 | ||||||||||||||| ||||| ||||||| Sbjct: 3027 ttctcaaatctgttgatacagcagaaagtga 3057 Score = 343 bits (173), Expect = 2e-90 Identities = 473/573 (82%) Strand = Plus / Plus Query: 285 acaacagctggtgaagaagagatatttcattgtgatcgatgacattcgaacagaagatca 344 ||||||| ||| ||||||||| || |||||||| ||||||||||||| |||||||||||| Sbjct: 1111 acaacagttggagaagaagaggtacttcattgttatcgatgacattcaaacagaagatca 1170 Query: 345 gtggaaaaccatcaaatctgccttgccagcagataagggtattagcagcagaatactggt 404 |||||||| ||||||||| || || || | ||||||| |||| ||||||||||| |||| Sbjct: 1171 gtggaaaagcatcaaatcggcttttccgactgataaggatattggcagcagaatagtggt 1230 Query: 405 gacgacaactattcagtcagtagctaatgcctgcagttctagtaatggctatgttcacaa 464 ||||| || || ||||||||||||||||||||| ||||| ||||| ||| | ||||| Sbjct: 1231 cacgacgaccatccagtcagtagctaatgcctgctgttctgcgaatgggtatttgcacaa 1290 Query: 465 gatgagcagacttgataaaatatgctcgaaacagttgttcaccaagaaagcttgtccaga 524 |||||||| |||||||| | ||||| || || ||||| ||||||||||||| ||||| Sbjct: 1291 aatgagcaggcttgataagaactgctcaaagcaattgttgtccaagaaagcttgcccaga 1350 Query: 525 caaatattcatgttacaagcagcctgatccagcagaagttttgaagaaatgtgacggcca 584 | |||||| |||||||||||| ||| |||||| | |||||||||||||||| ||||| Sbjct: 1351 gaggtattcacattacaagcagccagattcagcagcaattttgaagaaatgtgatggcca 1410 Query: 585 acctcttgcgctggtgacaataggtgaattcttgcaagcaaagggttggccaacaggacc 644 || ||||| || || || |||||||||||| ||||||| || || |||||||| || || Sbjct: 1411 gccacttgctcttgttaccataggtgaattcctgcaagctaatggctggccaacggggcc 1470 Query: 645 tagctgtgaagatatctgcacccagataggttatcacctggagaatgacaagagctttga 704 || |||||||||| |||||| | | || ||||||||| |||||||| || | |||| Sbjct: 1471 taactgtgaagatctctgcaatcggctacattatcacctagagaatgataaaacacttga 1530 Query: 705 aaaaatgcgaggtgtgctgattcataactacaccactctgcctagccatgctctcaaagc 764 || ||||| | |||||| | | |||||||| | ||| ||| ||||||||||||| || Sbjct: 1531 aaggatgcggcgagtgctggtccgcaactacactagtctacctggccatgctctcaaggc 1590 Query: 765 ctgcttgctatatttcggtatgttcccaagtaatcgtcccatcaggaagaaaagtctttt 824 |||||| |||||||| |||||||||||| | ||| ||| ||||||| ||||||||| || Sbjct: 1591 ctgcttactatattttggtatgttcccatctgatcatccaatcaggaggaaaagtctgtt 1650 Query: 825 gagacgatggcttgctgagggatttgtagaacc 857 ||| |||||||| || ||||||||||||||||| Sbjct: 1651 gaggcgatggctggccgagggatttgtagaacc 1683 Score = 129 bits (65), Expect = 6e-26 Identities = 146/173 (84%) Strand = Plus / Plus Query: 13 gagcagctggctgaggggcagcccagccggctgaaggtgatcgccgtcgtcgggttttgc 72 ||||||||||| ||| ||||||| | ||| |||||||||||| |||||||||| ||| Sbjct: 863 gagcagctggcggagcggcagccggagcagctcaaggtgatcgccatcgtcgggttctgc 922 Query: 73 ggcttggggaagaccgccctcgccgcggaagtgtacaacagagaaacccgcagcgagaga 132 || ||||||||||||||||||||||||| | ||||||| |||| |||||| ||| |||| Sbjct: 923 gggctggggaagaccgccctcgccgcggaggcgtacaaccgagagacccgcggcgggaga 982 Query: 133 tttgagaagcacgcgtgggtttatgcggcgctcaggagcccacgggaggtgct 185 || |||| |||||||||||||| || |||| | |||| ||||||||||||| Sbjct: 983 ttcgagaggcacgcgtgggtttgcgccgcgcaccggagtgcacgggaggtgct 1035 Score = 105 bits (53), Expect = 8e-19 Identities = 140/169 (82%) Strand = Plus / Plus Query: 916 aacatcattgagccaatcaacttgagcaacaatgataatgtgaagacttgtcaaacatat 975 ||||| |||||||| ||||| | ||||| |||||||| || ||||| || ||||| || Sbjct: 1742 aacattattgagcccatcaatgtaagcaataatgataaagtcaagacatgccaaacgtac 1801 Query: 976 ggcatgatgcgtgagttcattttgcacatgtccatctctcagaacttcgttaccttgttt 1035 || ||||||||||| ||||| | ||| ||||| |||||||||||||| || ||||| || Sbjct: 1802 ggtatgatgcgtgaattcatatcgcatatgtcaatctctcagaactttgtcacctttttc 1861 Query: 1036 tgcaatgacaagatagagcccaaatacgttcgtcggctttctctccatg 1084 || |||||||| | ||||||||| |||||||||||||||||||||| Sbjct: 1862 tgtgatgacaagttcctgcccaaatatgttcgtcggctttctctccatg 1910
>ref|NM_001074073.1| Oryza sativa (japonica cultivar-group) Os11g0226700 (Os11g0226700) mRNA, complete cds Length = 2931 Score = 69.9 bits (35), Expect = 4e-08 Identities = 41/43 (95%) Strand = Plus / Plus Query: 749 gccatgctctcaaagcctgcttgctatatttcggtatgttccc 791 ||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1235 gccatgctctcaaagcctgcttgctatattttggcatgttccc 1277 Score = 67.9 bits (34), Expect = 2e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 955 gtgaagacttgtcaaacatatggcatgatgcgtgagttcattttgc 1000 |||||||| |||||||| |||||||||||||| ||||||||||||| Sbjct: 1444 gtgaagacatgtcaaacttatggcatgatgcgcgagttcattttgc 1489 Score = 48.1 bits (24), Expect = 0.16 Identities = 48/56 (85%) Strand = Plus / Plus Query: 388 agcagcagaatactggtgacgacaactattcagtcagtagctaatgcctgcagttc 443 ||||| |||||| ||||||| ||||| | || ||||||||||| ||||||||||| Sbjct: 874 agcagtagaatagtggtgaccacaacagtgcaatcagtagctaaagcctgcagttc 929
>gb|AC119073.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0082N20 BAC genomic sequence, complete sequence Length = 138826 Score = 69.9 bits (35), Expect = 4e-08 Identities = 41/43 (95%) Strand = Plus / Plus Query: 749 gccatgctctcaaagcctgcttgctatatttcggtatgttccc 791 ||||||||||||||||||||||||||||||| || |||||||| Sbjct: 5364 gccatgctctcaaagcctgcttgctatattttggcatgttccc 5406 Score = 67.9 bits (34), Expect = 2e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 955 gtgaagacttgtcaaacatatggcatgatgcgtgagttcattttgc 1000 |||||||| |||||||| |||||||||||||| ||||||||||||| Sbjct: 5573 gtgaagacatgtcaaacttatggcatgatgcgcgagttcattttgc 5618 Score = 48.1 bits (24), Expect = 0.16 Identities = 48/56 (85%) Strand = Plus / Plus Query: 388 agcagcagaatactggtgacgacaactattcagtcagtagctaatgcctgcagttc 443 ||||| |||||| ||||||| ||||| | || ||||||||||| ||||||||||| Sbjct: 5003 agcagtagaatagtggtgaccacaacagtgcaatcagtagctaaagcctgcagttc 5058
>ref|XM_001015118.1| Tetrahymena thermophila SB210 DHHC zinc finger domain containing protein (TTHERM_00717990) mRNA, complete cds Length = 3189 Score = 46.1 bits (23), Expect = 0.65 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1973 tttctttggaactgcaatgtcca 1995 ||||||||||||||||||||||| Sbjct: 985 tttctttggaactgcaatgtcca 963
>gb|AC012157.21| Homo sapiens 12 BAC RP11-493P1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165833 Score = 46.1 bits (23), Expect = 0.65 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1076 ctctccatgagagctctgctacagatgctga 1106 |||| ||||||| |||||||||||||||||| Sbjct: 48912 ctcttcatgagatctctgctacagatgctga 48882
>gb|AC007912.6|AC007912 Homo sapiens chromosome , clone RP11-8A1, complete sequence Length = 171255 Score = 46.1 bits (23), Expect = 0.65 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1076 ctctccatgagagctctgctacagatgctga 1106 |||| ||||||| |||||||||||||||||| Sbjct: 57859 ctcttcatgagatctctgctacagatgctga 57889
>gb|AC188306.2| Pongo pygmaeus abelii BAC clone CH276-71H12 from chromosome unknown, complete sequence Length = 204734 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1359 aaggagaacaaagatacagata 1380 |||||||||||||||||||||| Sbjct: 163101 aaggagaacaaagatacagata 163122
>gb|AC124719.3| Mus musculus BAC clone RP23-382J10 from chromosome 12, complete sequence Length = 191038 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2087 tagaatatctcaaacatctcaaggag 2112 |||||||||||||| ||||||||||| Sbjct: 33545 tagaatatctcaaatatctcaaggag 33520
>gb|AC131332.12| Mus musculus chromosome 12, clone RP23-480O18, complete sequence Length = 182672 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2087 tagaatatctcaaacatctcaaggag 2112 |||||||||||||| ||||||||||| Sbjct: 42877 tagaatatctcaaatatctcaaggag 42902
>gb|AC146544.2| Gasterosteus aculeatus clone CH213-80N20, complete sequence Length = 181589 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2263 gctgaaagtgccattacggaaa 2284 |||||||||||||||||||||| Sbjct: 165749 gctgaaagtgccattacggaaa 165770
>gb|AC146543.2| Gasterosteus aculeatus clone CH213-67L12, complete sequence Length = 197879 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2263 gctgaaagtgccattacggaaa 2284 |||||||||||||||||||||| Sbjct: 144182 gctgaaagtgccattacggaaa 144203
>gb|AC159647.2| Mus musculus BAC clone RP23-66A14 from chromosome 12, complete sequence Length = 213946 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 749 gccatgctctcaaagcctgctt 770 |||||||||||||||||||||| Sbjct: 199098 gccatgctctcaaagcctgctt 199077
>gb|AC157512.3| Mus musculus BAC clone RP24-399L6 from chromosome 9, complete sequence Length = 148736 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 940 agcaacaatgataatgtgaaga 961 |||||||||||||||||||||| Sbjct: 85680 agcaacaatgataatgtgaaga 85701
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 509 agaaagcttgtccagacaaatattca 534 ||||||||||||||| |||||||||| Sbjct: 19039978 agaaagcttgtccaggcaaatattca 19039953
>emb|AL162580.20| Human DNA sequence from clone RP11-524A17 on chromosome 6 Contains a novel gene and a protein phosphatase 1 regulatory (inhibitor) subunit 14A (PPP1R14A) pseudogene, complete sequence Length = 171483 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1359 aaggagaacaaagatacagata 1380 |||||||||||||||||||||| Sbjct: 154433 aaggagaacaaagatacagata 154412
>gb|AC156568.3| Mus musculus BAC clone RP23-291D3 from chromosome 12, complete sequence Length = 224350 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 749 gccatgctctcaaagcctgctt 770 |||||||||||||||||||||| Sbjct: 16416 gccatgctctcaaagcctgctt 16395
>gb|AC008610.7| Homo sapiens chromosome 5 clone CTB-129O4, complete sequence Length = 145242 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 229 caggggaaaagtgtgctggagacctc 254 ||||||||| |||||||||||||||| Sbjct: 115853 caggggaaatgtgtgctggagacctc 115878
>gb|AC020559.4|AC020559 Homo sapiens BAC clone RP11-527F13 from 6, complete sequence Length = 194079 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1359 aaggagaacaaagatacagata 1380 |||||||||||||||||||||| Sbjct: 76799 aaggagaacaaagatacagata 76778
>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0047A17 Length = 149142 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 509 agaaagcttgtccagacaaatattca 534 ||||||||||||||| |||||||||| Sbjct: 45499 agaaagcttgtccaggcaaatattca 45474
>gb|AC137550.1| Homo sapiens chromosome 5 clone RP11-464K22, complete sequence Length = 43879 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 229 caggggaaaagtgtgctggagacctc 254 ||||||||| |||||||||||||||| Sbjct: 1380 caggggaaatgtgtgctggagacctc 1405
>gb|AY940041.1| Lycopersicon esculentum symbiosis receptor-like kinase (SYMRK) gene, complete cds Length = 12561 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 948 tgataatgtgaagacttgtcaa 969 |||||||||||||||||||||| Sbjct: 4346 tgataatgtgaagacttgtcaa 4367 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 494,691,024 Number of extensions: 26398382 Number of successful extensions: 135275 Number of sequences better than 10.0: 25 Number of HSP's gapped: 135266 Number of HSP's successfully gapped: 71 Length of query: 2629 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2606 Effective length of database: 18,503,978,556 Effective search space: 48221368116936 Effective search space used: 48221368116936 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
