No.
Definition
Score (bits)
E Value
1 dbj|AK241329.1| Oryza sativa (japonica cultivar-group) cDNA, clo...
398
e-107
2 ref|NM_001059728.1| Oryza sativa (japonica cultivar-group) Os04g...
398
e-107
3 emb|CR855196.1| Oryza sativa genomic DNA, chromosome 4, BAC clon...
234
9e-58
4 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...
234
9e-58
5 emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4,...
234
9e-58
6 emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4,...
234
9e-58
7 ref|NM_001051610.1| Oryza sativa (japonica cultivar-group) Os01g...
86
5e-13
8 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
86
5e-13
9 dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic D...
86
5e-13
10 dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic D...
86
5e-13
11 dbj|AK073544.1| Oryza sativa (japonica cultivar-group) cDNA clon...
86
5e-13
12 emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl...
50
0.028
13 ref|NM_001051600.1| Oryza sativa (japonica cultivar-group) Os01g...
48
0.11
14 ref|NM_001051609.1| Oryza sativa (japonica cultivar-group) Os01g...
46
0.44
15 dbj|AK063282.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.44
16 gb|CP000088.1| Thermobifida fusca YX, complete genome
44
1.8
17 emb|AL512444.20| Human DNA sequence from clone RP11-69E9 on chro...
44
1.8
18 emb|AL359272.9| Human DNA sequence from clone RP11-554P16 on chr...
44
1.8
19 emb|AL121872.12|HSB348B13 Human DNA sequence from clone RP13-348...
44
1.8
20 emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete ...
44
1.8
21 gb|AY112191.1| Zea mays CL50078_1 mRNA sequence
44
1.8
22 emb|AL591854.18| Mouse DNA sequence from clone RP23-105M23 on ch...
44
1.8
23 gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome
42
6.9
24 gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome
42
6.9
25 ref|XM_001219264.1| Chaetomium globosum CBS 148.51 hypothetical ...
42
6.9
26 ref|NM_001062815.1| Oryza sativa (japonica cultivar-group) Os05g...
42
6.9
27 ref|NM_001062622.1| Oryza sativa (japonica cultivar-group) Os05g...
42
6.9
28 gb|AC189549.1| Brassica rapa subsp. pekinensis clone KBrH005C21,...
42
6.9
29 gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
42
6.9
30 gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome
42
6.9
31 gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome
42
6.9
32 gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome
42
6.9
33 gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
42
6.9
34 gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
42
6.9
35 gb|AC151736.6| Mus musculus BAC clone RP23-9L16 from chromosome ...
42
6.9
36 gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome...
42
6.9
37 gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome
42
6.9
38 gb|U24144.1|SCU24144 Saccharomyces cerevisiae unknown mRNA
42
6.9
39 gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome
42
6.9
40 gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome...
42
6.9
41 ref|XM_500347.1| Yarrowia lipolytica CLIB122, YALI0B00528g predi...
42
6.9
42 gb|AE006633.1| Streptococcus pyogenes M1 GAS, section 162 of 167...
42
6.9
43 gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome
42
6.9
44 gb|AY338490.1| Homo sapiens glutathione reductase (GSR) gene, co...
42
6.9
45 dbj|AK135267.1| Mus musculus 12 days embryo male wolffian duct i...
42
6.9
46 gb|AY793783.1| Uncultured organism clone SIMO1-M13F_B12 unknown ...
42
6.9
47 gb|AY793767.1| Uncultured organism clone SIMO1_A04-M13F unknown ...
42
6.9
48 emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ...
42
6.9
49 ref|XM_797057.1| Trypanosoma cruzi strain CL Brener dynein heavy...
42
6.9
50 dbj|AK030934.1| Mus musculus adult male thymus cDNA, RIKEN full-...
42
6.9
51 gb|AE010120.1| Streptococcus pyogenes strain MGAS8232, section 1...
42
6.9
52 emb|CR680810.2|CNS0FO9I Tetraodon nigroviridis full-length cDNA
42
6.9
53 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
42
6.9
54 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
42
6.9
55 gb|AC009314.4| Homo sapiens BAC clone RP11-465K4 from 8, complet...
42
6.9
56 gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome
42
6.9
57 dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome
42
6.9
58 dbj|AK067043.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
6.9
59 dbj|AK058980.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
6.9
60 gb|AF228703.1|AF228703 Homo sapiens mitochondrial glutathione re...
42
6.9
61 gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
42
6.9
62 gb|AC135015.3| Mus musculus BAC clone RP24-227L14 from 8, comple...
42
6.9
63 emb|AL772423.4|CNS08CA1 Oryza sativa chromosome 12, . BAC OJ1058...
42
6.9
64 gb|AC124587.5| Mus musculus BAC clone RP23-132G24 from 1, comple...
42
6.9
65 emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1...
42
6.9
>dbj|AK241329.1 | Oryza sativa (japonica cultivar-group) cDNA, clone: J065143N24, full
insert sequence
Length = 1865
Score = 398 bits (201), Expect = e-107
Identities = 402/469 (85%)
Strand = Plus / Plus
Query: 956 ggggttcccggcgaagaggtggcacgggctgctgtccatgatgggctggggcgtgctgct 1015
|||||||||| || ||||| ||||||||||||| | ||||||| |||||||||||| |
Sbjct: 916 ggggttcccgccggagaggaagcacgggctgctggcgatgatggcgtggggcgtgctgat 975
Query: 1016 gccgatgggcatgatggtggcgcgctacttccggcggcaggacccgtactggttctacgg 1075
|||| | |||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 976 gccgctcggcatgatggcggcgcgctacttccggcgggtggacccgtactggttctacgc 1035
Query: 1076 ccacatcgccgtgcaggggctgggcttcctcatcggcatcgcggcggtcgtcctcggctt 1135
|||||| ||| | |||| | | ||| | ||||||||||| ||||||||||||||||
Sbjct: 1036 ccacatggccatccaggccgtcgcgttcaccgtcggcatcgcgtcggtcgtcctcggctt 1095
Query: 1136 ccggctcaacggggacgggctcaagaacatcgtggtgcacaaggtcatcggcatctccat 1195
||| ||||||| |||||||||||||||| ||| |||||| || |||||||| ||||
Sbjct: 1096 ccgcctcaacgaggacgggctcaagaacgtcgacgtgcaccgggcgctcggcatcgccat 1155
Query: 1196 cctgtccatggcatgcctccaggtgacggcggtgctggcgcggccggacaagacgtccaa 1255
|||| ||||||| | || ||||||| |||| | ||||||||||||||||||||||||||
Sbjct: 1156 cctggccatggcctcgctgcaggtgatggcgttcctggcgcggccggacaagacgtccaa 1215
Query: 1256 ggtgcgccggttctggaactggtaccaccacaacatcgggcgcgtggcgatccttctggc 1315
|||| | |||||||||||||||||||||||| |||||||||| | ||||||||| ||||
Sbjct: 1216 ggtgaggcggttctggaactggtaccaccactacatcgggcgggcggcgatcctggtggc 1275
Query: 1316 catggccaacgtcttcctcggcctcaccatcgccaaggaggtgagcgcgtacatcgtctc 1375
||| | |||| ||||||||||||| |||||| ||||||| ||||| |||||||||||
Sbjct: 1276 catcggcaacatcttcctcggcctgcacatcgcgcaggaggtcagcgcctacatcgtctc 1335
Query: 1376 ctacggcgtcttcgtcgccgtctggatcatggccgtcgccgccttcgag 1424
||||||||||||||||||||||||| |||| ||||||||||| ||||||
Sbjct: 1336 ctacggcgtcttcgtcgccgtctgggtcatcgccgtcgccgcgttcgag 1384
Score = 206 bits (104), Expect = 2e-49
Identities = 335/412 (81%)
Strand = Plus / Plus
Query: 450 ctcgtccccttcgactccgacgccttccactgcatcaccctctggaaggacgaggacttc 509
|||||||||||| ||||| |||||||| |||| | ||| |||||||| | |||||||||
Sbjct: 416 ctcgtccccttcaactcctccgccttccgctgcctgaccgtctggaagcaggaggacttc 475
Query: 510 atcctcaggtacaagaacacggggacgagccaatggagcttcgtgctgtcggcgccggac 569
|||| ||||||||||||| || |||||||||||||||| | || ||||||||||||
Sbjct: 476 gtcctgcggtacaagaacaccggagagagccaatggagcttcatcctctcggcgccggac 535
Query: 570 aagaggtcctacgtggccgtcgggttctcgggcaaggggggcatggtcggcagcagcgcc 629
||| | || |||||||| || |||||||| ||||||||| |||||||| |||||||||
Sbjct: 536 aagggctcgtacgtggcggtggggttctccggcaaggggctgatggtcggtagcagcgcc 595
Query: 630 atgctcggctggtcgtcgggcggcaagggcgtcgccaagcagtactacctgcagggcagg 689
| ||| |||||||||||||| |||||| | |||||||||||||| |||| |
Sbjct: 596 gtcgtcgcgtggtcgtcgggcgggaagggcacggtgaagcagtactacctcaccggcaag 655
Query: 690 agcccggaggccgtcaccccggacgacggccgcctcaccctcgtcaggaaccggaccgtc 749
||||| || | | ||||||| | ||||||||||| || |||| |||| | |||||
Sbjct: 656 agccccgacgagtgctacccggacaagggccgcctcacgctggtcaagaacaaggccgtc 715
Query: 750 gccgtctccaagtccggccggctctacctcgccttcgagctcagcaccgaccgcccgcag 809
||||| || |||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 716 gccgtgtcgcgctccggccggctctacctcgccttccagctcagcaccgacctcccgcag 775
Query: 810 ccgtacctgatctactccgtcggatacgagggcagcctcccttcctccgacg 861
||| ||||||||||| ||||||| |||||||| ||| || |||||||||
Sbjct: 776 ccgcacctgatctacgccgtcggccccgagggcaacctgccgccctccgacg 827
Score = 54.0 bits (27), Expect = 0.002
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 160 cttggccacttcctcccttccaagcaccgccaatcttgtccga 202
|||||||| ||| | ||||||||||||| ||||||||||||||
Sbjct: 85 cttggccatttcttaccttccaagcaccaccaatcttgtccga 127
Score = 44.1 bits (22), Expect = 1.8
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 102 agcatcctctgacctgccaaac 123
||||||||||||||||||||||
Sbjct: 42 agcatcctctgacctgccaaac 63
>emb|CR855196.1 | Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0159F11,
complete sequence
Length = 73831
Score = 234 bits (118), Expect = 9e-58
Identities = 187/210 (89%)
Strand = Plus / Plus
Query: 1215 caggtgacggcggtgctggcgcggccggacaagacgtccaaggtgcgccggttctggaac 1274
||||||| |||| | |||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 39795 caggtgatggcgttcctggcgcggccggacaagacgtccaaggtgaggcggttctggaac 39854
Query: 1275 tggtaccaccacaacatcgggcgcgtggcgatccttctggccatggccaacgtcttcctc 1334
|||||||||||| |||||||||| | ||||||||| ||||||| | |||| ||||||||
Sbjct: 39855 tggtaccaccactacatcgggcgggcggcgatcctggtggccatcggcaacatcttcctc 39914
Query: 1335 ggcctcaccatcgccaaggaggtgagcgcgtacatcgtctcctacggcgtcttcgtcgcc 1394
||||| |||||| ||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 39915 ggcctgcacatcgcgcaggaggtcagcgcctacatcgtctcctacggcgtcttcgtcgcc 39974
Query: 1395 gtctggatcatggccgtcgccgccttcgag 1424
|||||| |||| ||||||||||| ||||||
Sbjct: 39975 gtctgggtcatcgccgtcgccgcgttcgag 40004
Score = 182 bits (92), Expect = 3e-42
Identities = 212/252 (84%)
Strand = Plus / Plus
Query: 956 ggggttcccggcgaagaggtggcacgggctgctgtccatgatgggctggggcgtgctgct 1015
|||||||||| || ||||| ||||||||||||| | ||||||| |||||||||||| |
Sbjct: 38876 ggggttcccgccggagaggaagcacgggctgctggcgatgatggcgtggggcgtgctgat 38935
Query: 1016 gccgatgggcatgatggtggcgcgctacttccggcggcaggacccgtactggttctacgg 1075
|||| | |||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 38936 gccgctcggcatgatggcggcgcgctacttccggcgggtggacccgtactggttctacgc 38995
Query: 1076 ccacatcgccgtgcaggggctgggcttcctcatcggcatcgcggcggtcgtcctcggctt 1135
|||||| ||| | |||| | | ||| | ||||||||||| ||||||||||||||||
Sbjct: 38996 ccacatggccatccaggccgtcgcgttcaccgtcggcatcgcgtcggtcgtcctcggctt 39055
Query: 1136 ccggctcaacggggacgggctcaagaacatcgtggtgcacaaggtcatcggcatctccat 1195
||| ||||||| |||||||||||||||| ||| |||||| || |||||||| ||||
Sbjct: 39056 ccgcctcaacgaggacgggctcaagaacgtcgacgtgcaccgggcgctcggcatcgccat 39115
Query: 1196 cctgtccatggc 1207
|||| |||||||
Sbjct: 39116 cctggccatggc 39127
Score = 167 bits (84), Expect = 2e-37
Identities = 279/344 (81%)
Strand = Plus / Plus
Query: 518 gtacaagaacacggggacgagccaatggagcttcgtgctgtcggcgccggacaagaggtc 577
|||||||||||| || |||||||||||||||| | || ||||||||||||||| | ||
Sbjct: 38364 gtacaagaacaccggagagagccaatggagcttcatcctctcggcgccggacaagggctc 38423
Query: 578 ctacgtggccgtcgggttctcgggcaaggggggcatggtcggcagcagcgccatgctcgg 637
|||||||| || |||||||| ||||||||| |||||||| ||||||||| | |||
Sbjct: 38424 gtacgtggcggtggggttctccggcaaggggctgatggtcggtagcagcgccgtcgtcgc 38483
Query: 638 ctggtcgtcgggcggcaagggcgtcgccaagcagtactacctgcagggcaggagcccgga 697
|||||||||||||| |||||| | |||||||||||||| |||| |||||| ||
Sbjct: 38484 gtggtcgtcgggcgggaagggcacggtgaagcagtactacctcaccggcaagagccccga 38543
Query: 698 ggccgtcaccccggacgacggccgcctcaccctcgtcaggaaccggaccgtcgccgtctc 757
| | ||||||| | ||||||||||| || |||| |||| | |||||||||| ||
Sbjct: 38544 cgagtgctacccggacaagggccgcctcacgctggtcaagaacaaggccgtcgccgtgtc 38603
Query: 758 caagtccggccggctctacctcgccttcgagctcagcaccgaccgcccgcagccgtacct 817
|||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||
Sbjct: 38604 gcgctccggccggctctacctcgccttccagctcagcaccgacctcccgcagccgcacct 38663
Query: 818 gatctactccgtcggatacgagggcagcctcccttcctccgacg 861
||||||| ||||||| |||||||| ||| || |||||||||
Sbjct: 38664 gatctacgccgtcggccccgagggcaacctgccgccctccgacg 38707
Score = 54.0 bits (27), Expect = 0.002
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 160 cttggccacttcctcccttccaagcaccgccaatcttgtccga 202
|||||||| ||| | ||||||||||||| ||||||||||||||
Sbjct: 37521 cttggccatttcttaccttccaagcaccaccaatcttgtccga 37563
Score = 50.1 bits (25), Expect = 0.028
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 450 ctcgtccccttcgactccgacgccttccactgcatcaccctctggaaggacgaggacttc 509
|||||||||||| ||||| |||||||| |||| | ||| |||||||| | |||||||||
Sbjct: 37852 ctcgtccccttcaactcctccgccttccgctgcctgaccgtctggaagcaggaggacttc 37911
Query: 510 atcct 514
||||
Sbjct: 37912 gtcct 37916
Score = 42.1 bits (21), Expect = 6.9
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 agcatcctctgacctgccaaa 122
|||||||||||||||||||||
Sbjct: 37478 agcatcctctgacctgccaaa 37498
>dbj|AP008210.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
Length = 35498469
Score = 234 bits (118), Expect = 9e-58
Identities = 187/210 (89%)
Strand = Plus / Plus
Query: 1215 caggtgacggcggtgctggcgcggccggacaagacgtccaaggtgcgccggttctggaac 1274
||||||| |||| | |||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 24743857 caggtgatggcgttcctggcgcggccggacaagacgtccaaggtgaggcggttctggaac 24743916
Query: 1275 tggtaccaccacaacatcgggcgcgtggcgatccttctggccatggccaacgtcttcctc 1334
|||||||||||| |||||||||| | ||||||||| ||||||| | |||| ||||||||
Sbjct: 24743917 tggtaccaccactacatcgggcgggcggcgatcctggtggccatcggcaacatcttcctc 24743976
Query: 1335 ggcctcaccatcgccaaggaggtgagcgcgtacatcgtctcctacggcgtcttcgtcgcc 1394
||||| |||||| ||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 24743977 ggcctgcacatcgcgcaggaggtcagcgcctacatcgtctcctacggcgtcttcgtcgcc 24744036
Query: 1395 gtctggatcatggccgtcgccgccttcgag 1424
|||||| |||| ||||||||||| ||||||
Sbjct: 24744037 gtctgggtcatcgccgtcgccgcgttcgag 24744066
Score = 182 bits (92), Expect = 3e-42
Identities = 212/252 (84%)
Strand = Plus / Plus
Query: 956 ggggttcccggcgaagaggtggcacgggctgctgtccatgatgggctggggcgtgctgct 1015
|||||||||| || ||||| ||||||||||||| | ||||||| |||||||||||| |
Sbjct: 24742926 ggggttcccgccggagaggaagcacgggctgctggcgatgatggcgtggggcgtgctgat 24742985
Query: 1016 gccgatgggcatgatggtggcgcgctacttccggcggcaggacccgtactggttctacgg 1075
|||| | |||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 24742986 gccgctcggcatgatggcggcgcgctacttccggcgggtggacccgtactggttctacgc 24743045
Query: 1076 ccacatcgccgtgcaggggctgggcttcctcatcggcatcgcggcggtcgtcctcggctt 1135
|||||| ||| | |||| | | ||| | ||||||||||| ||||||||||||||||
Sbjct: 24743046 ccacatggccatccaggccgtcgcgttcaccgtcggcatcgcgtcggtcgtcctcggctt 24743105
Query: 1136 ccggctcaacggggacgggctcaagaacatcgtggtgcacaaggtcatcggcatctccat 1195
||| ||||||| |||||||||||||||| ||| |||||| || |||||||| ||||
Sbjct: 24743106 ccgcctcaacgaggacgggctcaagaacgtcgacgtgcaccgggcgctcggcatcgccat 24743165
Query: 1196 cctgtccatggc 1207
|||| |||||||
Sbjct: 24743166 cctggccatggc 24743177
Score = 167 bits (84), Expect = 2e-37
Identities = 279/344 (81%)
Strand = Plus / Plus
Query: 518 gtacaagaacacggggacgagccaatggagcttcgtgctgtcggcgccggacaagaggtc 577
|||||||||||| || |||||||||||||||| | || ||||||||||||||| | ||
Sbjct: 24742414 gtacaagaacaccggagagagccaatggagcttcatcctctcggcgccggacaagggctc 24742473
Query: 578 ctacgtggccgtcgggttctcgggcaaggggggcatggtcggcagcagcgccatgctcgg 637
|||||||| || |||||||| ||||||||| |||||||| ||||||||| | |||
Sbjct: 24742474 gtacgtggcggtggggttctccggcaaggggctgatggtcggtagcagcgccgtcgtcgc 24742533
Query: 638 ctggtcgtcgggcggcaagggcgtcgccaagcagtactacctgcagggcaggagcccgga 697
|||||||||||||| |||||| | |||||||||||||| |||| |||||| ||
Sbjct: 24742534 gtggtcgtcgggcgggaagggcacggtgaagcagtactacctcaccggcaagagccccga 24742593
Query: 698 ggccgtcaccccggacgacggccgcctcaccctcgtcaggaaccggaccgtcgccgtctc 757
| | ||||||| | ||||||||||| || |||| |||| | |||||||||| ||
Sbjct: 24742594 cgagtgctacccggacaagggccgcctcacgctggtcaagaacaaggccgtcgccgtgtc 24742653
Query: 758 caagtccggccggctctacctcgccttcgagctcagcaccgaccgcccgcagccgtacct 817
|||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||
Sbjct: 24742654 gcgctccggccggctctacctcgccttccagctcagcaccgacctcccgcagccgcacct 24742713
Query: 818 gatctactccgtcggatacgagggcagcctcccttcctccgacg 861
||||||| ||||||| |||||||| ||| || |||||||||
Sbjct: 24742714 gatctacgccgtcggccccgagggcaacctgccgccctccgacg 24742757
Score = 54.0 bits (27), Expect = 0.002
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 160 cttggccacttcctcccttccaagcaccgccaatcttgtccga 202
|||||||| ||| | ||||||||||||| ||||||||||||||
Sbjct: 24741571 cttggccatttcttaccttccaagcaccaccaatcttgtccga 24741613
Score = 50.1 bits (25), Expect = 0.028
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 450 ctcgtccccttcgactccgacgccttccactgcatcaccctctggaaggacgaggacttc 509
|||||||||||| ||||| |||||||| |||| | ||| |||||||| | |||||||||
Sbjct: 24741902 ctcgtccccttcaactcctccgccttccgctgcctgaccgtctggaagcaggaggacttc 24741961
Query: 510 atcct 514
||||
Sbjct: 24741962 gtcct 24741966
Score = 44.1 bits (22), Expect = 1.8
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 102 agcatcctctgacctgccaaac 123
||||||||||||||||||||||
Sbjct: 24741528 agcatcctctgacctgccaaac 24741549
>emb|AL606629.3 |OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11,
complete sequence
Length = 133856
Score = 234 bits (118), Expect = 9e-58
Identities = 187/210 (89%)
Strand = Plus / Plus
Query: 1215 caggtgacggcggtgctggcgcggccggacaagacgtccaaggtgcgccggttctggaac 1274
||||||| |||| | |||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 133380 caggtgatggcgttcctggcgcggccggacaagacgtccaaggtgaggcggttctggaac 133439
Query: 1275 tggtaccaccacaacatcgggcgcgtggcgatccttctggccatggccaacgtcttcctc 1334
|||||||||||| |||||||||| | ||||||||| ||||||| | |||| ||||||||
Sbjct: 133440 tggtaccaccactacatcgggcgggcggcgatcctggtggccatcggcaacatcttcctc 133499
Query: 1335 ggcctcaccatcgccaaggaggtgagcgcgtacatcgtctcctacggcgtcttcgtcgcc 1394
||||| |||||| ||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 133500 ggcctgcacatcgcgcaggaggtcagcgcctacatcgtctcctacggcgtcttcgtcgcc 133559
Query: 1395 gtctggatcatggccgtcgccgccttcgag 1424
|||||| |||| ||||||||||| ||||||
Sbjct: 133560 gtctgggtcatcgccgtcgccgcgttcgag 133589
Score = 182 bits (92), Expect = 3e-42
Identities = 212/252 (84%)
Strand = Plus / Plus
Query: 956 ggggttcccggcgaagaggtggcacgggctgctgtccatgatgggctggggcgtgctgct 1015
|||||||||| || ||||| ||||||||||||| | ||||||| |||||||||||| |
Sbjct: 132449 ggggttcccgccggagaggaagcacgggctgctggcgatgatggcgtggggcgtgctgat 132508
Query: 1016 gccgatgggcatgatggtggcgcgctacttccggcggcaggacccgtactggttctacgg 1075
|||| | |||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 132509 gccgctcggcatgatggcggcgcgctacttccggcgggtggacccgtactggttctacgc 132568
Query: 1076 ccacatcgccgtgcaggggctgggcttcctcatcggcatcgcggcggtcgtcctcggctt 1135
|||||| ||| | |||| | | ||| | ||||||||||| ||||||||||||||||
Sbjct: 132569 ccacatggccatccaggccgtcgcgttcaccgtcggcatcgcgtcggtcgtcctcggctt 132628
Query: 1136 ccggctcaacggggacgggctcaagaacatcgtggtgcacaaggtcatcggcatctccat 1195
||| ||||||| |||||||||||||||| ||| |||||| || |||||||| ||||
Sbjct: 132629 ccgcctcaacgaggacgggctcaagaacgtcgacgtgcaccgggcgctcggcatcgccat 132688
Query: 1196 cctgtccatggc 1207
|||| |||||||
Sbjct: 132689 cctggccatggc 132700
Score = 167 bits (84), Expect = 2e-37
Identities = 279/344 (81%)
Strand = Plus / Plus
Query: 518 gtacaagaacacggggacgagccaatggagcttcgtgctgtcggcgccggacaagaggtc 577
|||||||||||| || |||||||||||||||| | || ||||||||||||||| | ||
Sbjct: 131937 gtacaagaacaccggagagagccaatggagcttcatcctctcggcgccggacaagggctc 131996
Query: 578 ctacgtggccgtcgggttctcgggcaaggggggcatggtcggcagcagcgccatgctcgg 637
|||||||| || |||||||| ||||||||| |||||||| ||||||||| | |||
Sbjct: 131997 gtacgtggcggtggggttctccggcaaggggctgatggtcggtagcagcgccgtcgtcgc 132056
Query: 638 ctggtcgtcgggcggcaagggcgtcgccaagcagtactacctgcagggcaggagcccgga 697
|||||||||||||| |||||| | |||||||||||||| |||| |||||| ||
Sbjct: 132057 gtggtcgtcgggcgggaagggcacggtgaagcagtactacctcaccggcaagagccccga 132116
Query: 698 ggccgtcaccccggacgacggccgcctcaccctcgtcaggaaccggaccgtcgccgtctc 757
| | ||||||| | ||||||||||| || |||| |||| | |||||||||| ||
Sbjct: 132117 cgagtgctacccggacaagggccgcctcacgctggtcaagaacaaggccgtcgccgtgtc 132176
Query: 758 caagtccggccggctctacctcgccttcgagctcagcaccgaccgcccgcagccgtacct 817
|||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||
Sbjct: 132177 gcgctccggccggctctacctcgccttccagctcagcaccgacctcccgcagccgcacct 132236
Query: 818 gatctactccgtcggatacgagggcagcctcccttcctccgacg 861
||||||| ||||||| |||||||| ||| || |||||||||
Sbjct: 132237 gatctacgccgtcggccccgagggcaacctgccgccctccgacg 132280
Score = 54.0 bits (27), Expect = 0.002
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 160 cttggccacttcctcccttccaagcaccgccaatcttgtccga 202
|||||||| ||| | ||||||||||||| ||||||||||||||
Sbjct: 131094 cttggccatttcttaccttccaagcaccaccaatcttgtccga 131136
Score = 50.1 bits (25), Expect = 0.028
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 450 ctcgtccccttcgactccgacgccttccactgcatcaccctctggaaggacgaggacttc 509
|||||||||||| ||||| |||||||| |||| | ||| |||||||| | |||||||||
Sbjct: 131425 ctcgtccccttcaactcctccgccttccgctgcctgaccgtctggaagcaggaggacttc 131484
Query: 510 atcct 514
||||
Sbjct: 131485 gtcct 131489
Score = 44.1 bits (22), Expect = 1.8
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 102 agcatcctctgacctgccaaac 123
||||||||||||||||||||||
Sbjct: 131051 agcatcctctgacctgccaaac 131072
>emb|AL606627.3 |OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
complete sequence
Length = 170765
Score = 234 bits (118), Expect = 9e-58
Identities = 187/210 (89%)
Strand = Plus / Plus
Query: 1215 caggtgacggcggtgctggcgcggccggacaagacgtccaaggtgcgccggttctggaac 1274
||||||| |||| | |||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 5573 caggtgatggcgttcctggcgcggccggacaagacgtccaaggtgaggcggttctggaac 5632
Query: 1275 tggtaccaccacaacatcgggcgcgtggcgatccttctggccatggccaacgtcttcctc 1334
|||||||||||| |||||||||| | ||||||||| ||||||| | |||| ||||||||
Sbjct: 5633 tggtaccaccactacatcgggcgggcggcgatcctggtggccatcggcaacatcttcctc 5692
Query: 1335 ggcctcaccatcgccaaggaggtgagcgcgtacatcgtctcctacggcgtcttcgtcgcc 1394
||||| |||||| ||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 5693 ggcctgcacatcgcgcaggaggtcagcgcctacatcgtctcctacggcgtcttcgtcgcc 5752
Query: 1395 gtctggatcatggccgtcgccgccttcgag 1424
|||||| |||| ||||||||||| ||||||
Sbjct: 5753 gtctgggtcatcgccgtcgccgcgttcgag 5782
Score = 182 bits (92), Expect = 3e-42
Identities = 212/252 (84%)
Strand = Plus / Plus
Query: 956 ggggttcccggcgaagaggtggcacgggctgctgtccatgatgggctggggcgtgctgct 1015
|||||||||| || ||||| ||||||||||||| | ||||||| |||||||||||| |
Sbjct: 4642 ggggttcccgccggagaggaagcacgggctgctggcgatgatggcgtggggcgtgctgat 4701
Query: 1016 gccgatgggcatgatggtggcgcgctacttccggcggcaggacccgtactggttctacgg 1075
|||| | |||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4702 gccgctcggcatgatggcggcgcgctacttccggcgggtggacccgtactggttctacgc 4761
Query: 1076 ccacatcgccgtgcaggggctgggcttcctcatcggcatcgcggcggtcgtcctcggctt 1135
|||||| ||| | |||| | | ||| | ||||||||||| ||||||||||||||||
Sbjct: 4762 ccacatggccatccaggccgtcgcgttcaccgtcggcatcgcgtcggtcgtcctcggctt 4821
Query: 1136 ccggctcaacggggacgggctcaagaacatcgtggtgcacaaggtcatcggcatctccat 1195
||| ||||||| |||||||||||||||| ||| |||||| || |||||||| ||||
Sbjct: 4822 ccgcctcaacgaggacgggctcaagaacgtcgacgtgcaccgggcgctcggcatcgccat 4881
Query: 1196 cctgtccatggc 1207
|||| |||||||
Sbjct: 4882 cctggccatggc 4893
Score = 167 bits (84), Expect = 2e-37
Identities = 279/344 (81%)
Strand = Plus / Plus
Query: 518 gtacaagaacacggggacgagccaatggagcttcgtgctgtcggcgccggacaagaggtc 577
|||||||||||| || |||||||||||||||| | || ||||||||||||||| | ||
Sbjct: 4130 gtacaagaacaccggagagagccaatggagcttcatcctctcggcgccggacaagggctc 4189
Query: 578 ctacgtggccgtcgggttctcgggcaaggggggcatggtcggcagcagcgccatgctcgg 637
|||||||| || |||||||| ||||||||| |||||||| ||||||||| | |||
Sbjct: 4190 gtacgtggcggtggggttctccggcaaggggctgatggtcggtagcagcgccgtcgtcgc 4249
Query: 638 ctggtcgtcgggcggcaagggcgtcgccaagcagtactacctgcagggcaggagcccgga 697
|||||||||||||| |||||| | |||||||||||||| |||| |||||| ||
Sbjct: 4250 gtggtcgtcgggcgggaagggcacggtgaagcagtactacctcaccggcaagagccccga 4309
Query: 698 ggccgtcaccccggacgacggccgcctcaccctcgtcaggaaccggaccgtcgccgtctc 757
| | ||||||| | ||||||||||| || |||| |||| | |||||||||| ||
Sbjct: 4310 cgagtgctacccggacaagggccgcctcacgctggtcaagaacaaggccgtcgccgtgtc 4369
Query: 758 caagtccggccggctctacctcgccttcgagctcagcaccgaccgcccgcagccgtacct 817
|||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||
Sbjct: 4370 gcgctccggccggctctacctcgccttccagctcagcaccgacctcccgcagccgcacct 4429
Query: 818 gatctactccgtcggatacgagggcagcctcccttcctccgacg 861
||||||| ||||||| |||||||| ||| || |||||||||
Sbjct: 4430 gatctacgccgtcggccccgagggcaacctgccgccctccgacg 4473
Score = 54.0 bits (27), Expect = 0.002
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 160 cttggccacttcctcccttccaagcaccgccaatcttgtccga 202
|||||||| ||| | ||||||||||||| ||||||||||||||
Sbjct: 3287 cttggccatttcttaccttccaagcaccaccaatcttgtccga 3329
Score = 50.1 bits (25), Expect = 0.028
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 450 ctcgtccccttcgactccgacgccttccactgcatcaccctctggaaggacgaggacttc 509
|||||||||||| ||||| |||||||| |||| | ||| |||||||| | |||||||||
Sbjct: 3618 ctcgtccccttcaactcctccgccttccgctgcctgaccgtctggaagcaggaggacttc 3677
Query: 510 atcct 514
||||
Sbjct: 3678 gtcct 3682
Score = 44.1 bits (22), Expect = 1.8
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 102 agcatcctctgacctgccaaac 123
||||||||||||||||||||||
Sbjct: 3244 agcatcctctgacctgccaaac 3265
>dbj|AP008207.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
Length = 43261740
Score = 85.7 bits (43), Expect = 5e-13
Identities = 79/91 (86%)
Strand = Plus / Plus
Query: 1209 tgcctccaggtgacggcggtgctggcgcggccggacaagacgtccaaggtgcgccggttc 1268
|||||||||||| ||| | |||||||||||||||||| ||||||||||| | ||| |
Sbjct: 38919180 tgcctccaggtgctcgcgttcctggcgcggccggacaagtcgtccaaggtgaggaggtac 38919239
Query: 1269 tggaactggtaccaccacaacatcgggcgcg 1299
||||||||||||||||||||| |||| ||||
Sbjct: 38919240 tggaactggtaccaccacaacgtcggccgcg 38919270
Score = 60.0 bits (30), Expect = 3e-05
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 543 tggagcttcgtgctgtcggcgccggacaag 572
||||||||||||||||||||||||||||||
Sbjct: 38918523 tggagcttcgtgctgtcggcgccggacaag 38918552
Score = 50.1 bits (25), Expect = 0.028
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 1033 tggcgcgctacttccggcggcaggacccgtactggttctacggccacatcgccgtgcagg 1092
|||||||||||||| | ||| ||||||| ||||||||||| |||||| |||||||||
Sbjct: 38919007 tggcgcgctacttcaagaagcacgacccgttctggttctacgcgcacatctccgtgcagg 38919066
Query: 1093 g 1093
|
Sbjct: 38919067 g 38919067
Score = 48.1 bits (24), Expect = 0.11
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 543 tggagcttcgtgctgtcggcgccggaca 570
|||| |||||||||||||||||||||||
Sbjct: 38847226 tggaacttcgtgctgtcggcgccggaca 38847199
Score = 46.1 bits (23), Expect = 0.44
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 543 tggagcttcgtgctgtcggcgccggac 569
|||| ||||||||||||||||||||||
Sbjct: 38909746 tggaacttcgtgctgtcggcgccggac 38909772
Score = 46.1 bits (23), Expect = 0.44
Identities = 74/91 (81%)
Strand = Plus / Plus
Query: 1209 tgcctccaggtgacggcggtgctggcgcggccggacaagacgtccaaggtgcgccggttc 1268
||||| ||||||| ||| ||||||||| ||||| |||| | | |||| |||| || |
Sbjct: 38910663 tgcctgcaggtgatggccgtgctggcgaggccgatcaaggaggcgaaggcgcgcaagtac 38910722
Query: 1269 tggaactggtaccaccacaacatcgggcgcg 1299
|||||||||||||||||| || |||| ||||
Sbjct: 38910723 tggaactggtaccaccactacgtcggccgcg 38910753
>dbj|AP003407.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1078G07
Length = 199457
Score = 85.7 bits (43), Expect = 5e-13
Identities = 79/91 (86%)
Strand = Plus / Plus
Query: 1209 tgcctccaggtgacggcggtgctggcgcggccggacaagacgtccaaggtgcgccggttc 1268
|||||||||||| ||| | |||||||||||||||||| ||||||||||| | ||| |
Sbjct: 192062 tgcctccaggtgctcgcgttcctggcgcggccggacaagtcgtccaaggtgaggaggtac 192121
Query: 1269 tggaactggtaccaccacaacatcgggcgcg 1299
||||||||||||||||||||| |||| ||||
Sbjct: 192122 tggaactggtaccaccacaacgtcggccgcg 192152
Score = 60.0 bits (30), Expect = 3e-05
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 543 tggagcttcgtgctgtcggcgccggacaag 572
||||||||||||||||||||||||||||||
Sbjct: 191405 tggagcttcgtgctgtcggcgccggacaag 191434
Score = 50.1 bits (25), Expect = 0.028
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 1033 tggcgcgctacttccggcggcaggacccgtactggttctacggccacatcgccgtgcagg 1092
|||||||||||||| | ||| ||||||| ||||||||||| |||||| |||||||||
Sbjct: 191889 tggcgcgctacttcaagaagcacgacccgttctggttctacgcgcacatctccgtgcagg 191948
Query: 1093 g 1093
|
Sbjct: 191949 g 191949
Score = 48.1 bits (24), Expect = 0.11
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 543 tggagcttcgtgctgtcggcgccggaca 570
|||| |||||||||||||||||||||||
Sbjct: 120108 tggaacttcgtgctgtcggcgccggaca 120081
Score = 46.1 bits (23), Expect = 0.44
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 543 tggagcttcgtgctgtcggcgccggac 569
|||| ||||||||||||||||||||||
Sbjct: 182628 tggaacttcgtgctgtcggcgccggac 182654
Score = 46.1 bits (23), Expect = 0.44
Identities = 74/91 (81%)
Strand = Plus / Plus
Query: 1209 tgcctccaggtgacggcggtgctggcgcggccggacaagacgtccaaggtgcgccggttc 1268
||||| ||||||| ||| ||||||||| ||||| |||| | | |||| |||| || |
Sbjct: 183545 tgcctgcaggtgatggccgtgctggcgaggccgatcaaggaggcgaaggcgcgcaagtac 183604
Query: 1269 tggaactggtaccaccacaacatcgggcgcg 1299
|||||||||||||||||| || |||| ||||
Sbjct: 183605 tggaactggtaccaccactacgtcggccgcg 183635
>dbj|AP003316.4 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0696G06
Length = 142571
Score = 85.7 bits (43), Expect = 5e-13
Identities = 79/91 (86%)
Strand = Plus / Plus
Query: 1209 tgcctccaggtgacggcggtgctggcgcggccggacaagacgtccaaggtgcgccggttc 1268
|||||||||||| ||| | |||||||||||||||||| ||||||||||| | ||| |
Sbjct: 83966 tgcctccaggtgctcgcgttcctggcgcggccggacaagtcgtccaaggtgaggaggtac 84025
Query: 1269 tggaactggtaccaccacaacatcgggcgcg 1299
||||||||||||||||||||| |||| ||||
Sbjct: 84026 tggaactggtaccaccacaacgtcggccgcg 84056
Score = 60.0 bits (30), Expect = 3e-05
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 543 tggagcttcgtgctgtcggcgccggacaag 572
||||||||||||||||||||||||||||||
Sbjct: 83309 tggagcttcgtgctgtcggcgccggacaag 83338
Score = 50.1 bits (25), Expect = 0.028
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 1033 tggcgcgctacttccggcggcaggacccgtactggttctacggccacatcgccgtgcagg 1092
|||||||||||||| | ||| ||||||| ||||||||||| |||||| |||||||||
Sbjct: 83793 tggcgcgctacttcaagaagcacgacccgttctggttctacgcgcacatctccgtgcagg 83852
Query: 1093 g 1093
|
Sbjct: 83853 g 83853
Score = 48.1 bits (24), Expect = 0.11
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 543 tggagcttcgtgctgtcggcgccggaca 570
|||| |||||||||||||||||||||||
Sbjct: 12012 tggaacttcgtgctgtcggcgccggaca 11985
Score = 46.1 bits (23), Expect = 0.44
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 543 tggagcttcgtgctgtcggcgccggac 569
|||| ||||||||||||||||||||||
Sbjct: 74532 tggaacttcgtgctgtcggcgccggac 74558
Score = 46.1 bits (23), Expect = 0.44
Identities = 74/91 (81%)
Strand = Plus / Plus
Query: 1209 tgcctccaggtgacggcggtgctggcgcggccggacaagacgtccaaggtgcgccggttc 1268
||||| ||||||| ||| ||||||||| ||||| |||| | | |||| |||| || |
Sbjct: 75449 tgcctgcaggtgatggccgtgctggcgaggccgatcaaggaggcgaaggcgcgcaagtac 75508
Query: 1269 tggaactggtaccaccacaacatcgggcgcg 1299
|||||||||||||||||| || |||| ||||
Sbjct: 75509 tggaactggtaccaccactacgtcggccgcg 75539
>emb|CR382128.1 | Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia
lipolytica
Length = 3066374
Score = 42.1 bits (21), Expect = 6.9
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1435 actacgaggacgacgacgact 1455
|||||||||||||||||||||
Sbjct: 48478 actacgaggacgacgacgact 48458
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 232,870,946
Number of extensions: 12838323
Number of successful extensions: 292687
Number of sequences better than 10.0: 65
Number of HSP's gapped: 292679
Number of HSP's successfully gapped: 123
Length of query: 1818
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1795
Effective length of database: 18,503,978,556
Effective search space: 33214641508020
Effective search space used: 33214641508020
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)