ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf61j05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK070180:Os10g0328700 34 0.12
2AK101483:Os07g0644300 30 1.3
3AK066726:Os07g0644300 30 1.3
4AK106098:Os01g0614700 29 3.0
5AK068534:Os03g0308800 28 6.7
6AK060285:Os03g0308800 28 6.7
7AY224549:Os01g0109700 28 8.7
8AK121497:Os01g0109700 28 8.7

>AK070180:Os10g0328700 |
          Length = 711
 Score = 33.9 bits (76), Expect = 0.12
 Identities = 20/47 (42%), Positives = 27/47 (57%)
 Frame = -2

Query: 145 RAEFESGTAADPGNDELWRRFVKFELEEGGGIEAARGVYERVLAALP 5
           R  F+  T+  PG D  W  +  FEL  G  ++ AR V+ER +AALP
Sbjct: 179 RVVFDRWTSWRPGADA-WAAYAAFELRHGE-LDRARAVHERHVAALP 223



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>AK101483:Os07g0644300 |
          Length = 931

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
 Frame = -2

Query: 187 MAEQATTEMSPEAKRAEFESGTAADPGND----------ELWRRFVKFELEEGGGIEAAR 38
           +  QAT E S E KR       AA  G++          +LW  +V  E E  G +E+ R
Sbjct: 494 LMRQATAEPSVEVKRR------AAAEGDEPVQLKVHKSLKLWSFYVDLE-ESLGTLESTR 546

Query: 37  GVYERVL 17
            VYER+L
Sbjct: 547 AVYERIL 553



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>AK066726:Os07g0644300 |
          Length = 931

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
 Frame = -2

Query: 187 MAEQATTEMSPEAKRAEFESGTAADPGND----------ELWRRFVKFELEEGGGIEAAR 38
           +  QAT E S E KR       AA  G++          +LW  +V  E E  G +E+ R
Sbjct: 494 LMRQATAEPSVEVKRR------AAAEGDEPVQLKVHKSLKLWSFYVDLE-ESLGTLESTR 546

Query: 37  GVYERVL 17
            VYER+L
Sbjct: 547 AVYERIL 553



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>AK106098:Os01g0614700 |
          Length = 310

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -2

Query: 220 KTQYPDRHIKPMAEQATTEMSPEAKRAEFESGTAADPGNDE 98
           K ++P  H +P A+   +   P+A+ A  E  TAA+    E
Sbjct: 257 KAEFPSSHEQPAADNVASSPPPKAEAAPQEQPTAAEKAPQE 297



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>AK068534:Os03g0308800 |
          Length = 626

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = -2

Query: 160 SPEAKRAEFESGTAADPGNDELWRRFVKFELEEGGGIEAARGVYERVLA 14
           SP   R  F   +  DP +  +W  +   E +EG     AR +Y+R L+
Sbjct: 362 SPNTARVLFRKASQIDPRHQPVWIAWGWMEWKEGNA-RTARTLYQRALS 409



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>AK060285:Os03g0308800 |
          Length = 401

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = -2

Query: 160 SPEAKRAEFESGTAADPGNDELWRRFVKFELEEGGGIEAARGVYERVLA 14
           SP   R  F   +  DP +  +W  +   E +EG     AR +Y+R L+
Sbjct: 137 SPNTARVLFRKASQIDPRHQPVWIAWGWMEWKEGNA-RTARTLYQRALS 184



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>AY224549:Os01g0109700 |
          Length = 181

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 20/52 (38%), Positives = 24/52 (46%)
 Frame = -3

Query: 309 EPDLIWNSDTAYRSNPSDININDLP*KYIAKPNTRIDTSNRWQSKRPQRCPP 154
           EPD I     AY+  PS   +     KYI KP + +D SN       QRC P
Sbjct: 45  EPDRI-EKVPAYKEAPSQKPVFSSKEKYIYKPVSELDLSN------CQRCTP 89



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>AK121497:Os01g0109700 |
          Length = 1326

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 20/52 (38%), Positives = 24/52 (46%)
 Frame = -3

Query: 309 EPDLIWNSDTAYRSNPSDININDLP*KYIAKPNTRIDTSNRWQSKRPQRCPP 154
           EPD I     AY+  PS   +     KYI KP + +D SN       QRC P
Sbjct: 347 EPDRI-EKVPAYKEAPSQKPVFSSKEKYIYKPVSELDLSN------CQRCTP 391


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 19,624,526
Number of extensions: 422790
Number of successful extensions: 1077
Number of sequences better than 10.0: 8
Number of HSP's gapped: 1077
Number of HSP's successfully gapped: 8
Length of query: 249
Length of database: 15,399,855
Length adjustment: 98
Effective length of query: 151
Effective length of database: 11,475,837
Effective search space: 1732851387
Effective search space used: 1732851387
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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