ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf61j05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete se... 68 5e-08
2gb|DQ871219.1| Triticum turgidum subsp. dicoccoides clones BAC 4... 64 8e-07
3gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, c... 62 3e-06
4gb|DQ175928.1| Hordeum vulgare subsp. vulgare clone 33-15A-LB fl... 56 2e-04
5gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene lo... 54 7e-04
6gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC cl... 54 7e-04
7gb|DQ175976.1| Hordeum vulgare subsp. vulgare clone 41-1A-RB fla... 54 7e-04
8gb|DQ175916.1| Hordeum vulgare subsp. vulgare clone 29-25A-LB fl... 54 7e-04
9gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 ge... 54 7e-04
10gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial c... 52 0.003
11gb|DQ537337.1| Triticum aestivum clone BAC 897M20, complete sequ... 48 0.046
12gb|DQ537335.1| Triticum aestivum clones BAC 1031P08; BAC 754K10;... 48 0.046
13emb|CT009587.1| Triticum turgidum 48 0.046
14gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones B... 48 0.046
15gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete se... 48 0.046
16gb|AY188516.1| Leymus mollis clone pLmIs1 Sabrina-like transposo... 48 0.046
17gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A1... 48 0.046
18emb|Z26333.1|HVPRB1X H.vulgare gene for pathogenesis-related pro... 48 0.046
19gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC... 48 0.046
20gb|AF078801.1|AF078801 Hordeum vulgare degenerate retrotransposo... 48 0.046
21gb|AY509202.1| Triticum aestivum transposon, partial sequence 46 0.18
22gb|AF532104.1|AF532104S1 Aegilops tauschii strain TA1649 cosmid ... 46 0.18
23emb|CT009625.1| Aegilops tauschii 44 0.71
24emb|CR626926.1| Aegilops tauschii 44 0.71
25emb|CR387926.5| Zebrafish DNA sequence from clone CH211-247J4 in... 44 0.71
26gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete s... 42 2.8
27gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, comple... 42 2.8
28gb|AF497474.1| Aegilops tauschii leucine-rich-like protein gene,... 42 2.8
29gb|AC008285.7| Drosophila melanogaster clone BACR31P16, complete... 42 2.8
30gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete seq... 42 2.8
31ref|NM_079806.2| Drosophila melanogaster sidestep CG31062-RA (si... 42 2.8
32gb|AF358267.1|AF358267 Drosophila melanogaster sidestep mRNA, co... 42 2.8
33gb|AC008135.12|AC008135 Drosophila melanogaster, chromosome 3R, ... 42 2.8
34gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156... 42 2.8
35gb|AC133938.4| Mus musculus BAC clone RP23-399J17 from 3, comple... 42 2.8
36emb|AL954313.6| Zebrafish DNA sequence from clone CH211-257J20 i... 42 2.8
37gb|U23520.2| Caenorhabditis elegans cosmid C35B8, complete sequence 42 2.8

>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence
          Length = 285506
 Score = 67.9 bits (34), Expect = 5e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                            
Query: 681    tatatgatgatggaagttgcatgtcaatatatatctgaatggctat 726
              ||||||||||||||||||||||| |||||||| || ||||||||||
Sbjct: 279680 tatatgatgatggaagttgcatggcaatatatctcggaatggctat 279725



 Score = 50.1 bits (25), Expect = 0.012
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 553    gtgtaccgggatgtgcaacgatctagcat 581
              |||||||||||||||||| ||||||||||
Sbjct: 279556 gtgtaccgggatgtgcaatgatctagcat 279584



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>gb|DQ871219.1| Triticum turgidum subsp. dicoccoides clones BAC 409D13 and BAC 916O17,
              complete sequence
          Length = 245486

 Score = 63.9 bits (32), Expect = 8e-07
 Identities = 79/92 (85%), Gaps = 2/92 (2%)
 Strand = Plus / Plus

                                                                          
Query: 637    tatgatcatgcaaagcaatatgtagatggatggactagtcatat-tat-atgatgatgga 694
              ||||||||||||||||||||||   ||| |||  | |||||| | ||| |||||||||||
Sbjct: 106150 tatgatcatgcaaagcaatatgacaatgaatgctcaagtcatgtatatgatgatgatgga 106209

                                              
Query: 695    agttgcatgtcaatatatatctgaatggctat 726
              ||||||||| |||||||| || ||||||||||
Sbjct: 106210 agttgcatggcaatatatctcggaatggctat 106241



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                         
Query: 684    atgatgatggaagttgcatgtcaatatatatctgaatggctat 726
              |||||| ||||||||||||| |||||||| || ||||||||||
Sbjct: 162310 atgatggtggaagttgcatggcaatatatctcggaatggctat 162268



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                        
Query: 466    tcacacttttatttacttacaacttggtattacatctcgata 507
              ||||||||||||||||||||||||   ||||||| |||||||
Sbjct: 105988 tcacacttttatttacttacaactcaatattacaactcgata 106029



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>gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, complete sequence
          Length = 111912

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 684   atgatgatggaagttgcatgtcaatatatatctgaatggctat 726
             |||||||||||||||||||| |||||||| || ||||||||||
Sbjct: 91544 atgatgatggaagttgcatggcaatatatctcggaatggctat 91502



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>gb|DQ175928.1| Hordeum vulgare subsp. vulgare clone 33-15A-LB flanking T-DNA
           insertion sequence
          Length = 721

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 552 agtgtaccgggatgtgcaacgatctagc 579
           ||||||||||||||||||||||||||||
Sbjct: 572 agtgtaccgggatgtgcaacgatctagc 545



 Score = 48.1 bits (24), Expect = 0.046
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 466 tcacacttttatttacttacaact 489
           ||||||||||||||||||||||||
Sbjct: 639 tcacacttttatttacttacaact 616



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>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence
          Length = 307015

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                         
Query: 684    atgatgatggaagttgcatgtcaatatatatctgaatggctat 726
              |||||| ||||||||||||| |||||||| || ||||||||||
Sbjct: 143151 atgatgttggaagttgcatggcaatatatctcggaatggctat 143109



 Score = 48.1 bits (24), Expect = 0.046
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 466    tcacacttttatttacttacaact 489
              ||||||||||||||||||||||||
Sbjct: 129236 tcacacttttatttacttacaact 129259



 Score = 48.1 bits (24), Expect = 0.046
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                      
Query: 468    acacttttatttacttacaacttggtattacatctcgata 507
              ||||||||||||||||||||||   ||||||| |||||||
Sbjct: 143358 acacttttatttacttacaactcactattacaactcgata 143319



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 638    atgatcatgcaaagcaatatgt 659
              ||||||||||||||||||||||
Sbjct: 213591 atgatcatgcaaagcaatatgt 213570



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>gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC clone 773k14, complete
            sequence
          Length = 113510

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 142/178 (79%), Gaps = 3/178 (1%)
 Strand = Plus / Plus

                                                                        
Query: 552  agtgtaccgggatgtgcaacgatctagcatgacatgtataaaaa--attatagttggtag 609
            |||||||| |||| ||||| |||||||| |||||||||| ||||  || || |   || |
Sbjct: 9583 agtgtaccaggatatgcaatgatctagcgtgacatgtatcaaaaccatgatggaaagtgg 9642

                                                                        
Query: 610  ctttgccacaaacactatatcatc-ctgtatgatcatgcaaagcaatatgtagatggatg 668
            |||||||||||| ||||| | | | || ||||||||| |||||||||| |  |||| | |
Sbjct: 9643 ctttgccacaaatactatgtgagctctatatgatcattcaaagcaataggacgatgaacg 9702

                                                                      
Query: 669  gactagtcatattatatgatgatggaagttgcatgtcaatatatatctgaatggctat 726
             ||||||||| | |  ||| ||||||| ||||||| ||| ||||||  ||||||||||
Sbjct: 9703 aactagtcatgtgaagtgacgatggaatttgcatggcaacatatattggaatggctat 9760



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>gb|DQ175976.1| Hordeum vulgare subsp. vulgare clone 41-1A-RB flanking T-DNA
           insertion sequence
          Length = 897

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 552 agtgtaccgggatgtgcaacgatctag 578
           |||||||||||||||||||||||||||
Sbjct: 27  agtgtaccgggatgtgcaacgatctag 1



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>gb|DQ175916.1| Hordeum vulgare subsp. vulgare clone 29-25A-LB flanking T-DNA
           insertion sequence
          Length = 769

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                       
Query: 640 gatcatgcaaagcaatatgtagatggatggactagtcatattatatgatgatggaagttg 699
           ||||||||||||  |||||   ||||| | || |||||||| | |||||| |||||||||
Sbjct: 372 gatcatgcaaagtgatatgacaatggaagtacaagtcatatgaaatgatggtggaagttg 313

                                      
Query: 700 catgtcaatatatatctgaatggctat 726
           |||| |||||||| || |||| |||||
Sbjct: 312 catggcaatatatctcggaattgctat 286



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 467 cacacttttatttacttacaacttg 491
           ||||||| |||||||||||||||||
Sbjct: 530 cacacttctatttacttacaacttg 506



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>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence
          Length = 215241

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 684   atgatgatggaagttgcatgtcaatatatatctgaatggctat 726
             |||||| ||||||||||||| |||||||| || ||||||||||
Sbjct: 12227 atgatggtggaagttgcatggcaatatatctcggaatggctat 12269



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>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome
              condensation factor (CCF), putative resistance protein
              (RGA-2), putative resistance protein (RGA2) and putative
              nodulin-like-like protein (NLL) gene, complete cds; and
              retrotransposons Josephine, Angela-2, Angela-4, Heidi,
              Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5,
              Barbara, Isabelle, Erika-2, and Claudia
          Length = 211009

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                        
Query: 466    tcacacttttatttacttacaacttggtattacatctcgata 507
              ||||||||||||||||||||||||   ||||||| |||||||
Sbjct: 183563 tcacacttttatttacttacaactcaatattacaactcgata 183604



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 686    gatgatggaagttgcatgtcaatatat 712
              |||||||||||||||||| ||||||||
Sbjct: 183775 gatgatggaagttgcatggcaatatat 183801



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 637    tatgatcatgcaaagcaatatg 658
              ||||||||||||||||||||||
Sbjct: 183725 tatgatcatgcaaagcaatatg 183746



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 638   atgatcatgcaaagcaatatg 658
             |||||||||||||||||||||
Sbjct: 87720 atgatcatgcaaagcaatatg 87700



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 466   tcacacttttatttacttaca 486
             |||||||||||||||||||||
Sbjct: 87889 tcacacttttatttacttaca 87869



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>gb|DQ537337.1| Triticum aestivum clone BAC 897M20, complete sequence
          Length = 152010

 Score = 48.1 bits (24), Expect = 0.046
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 466    tcacacttttatttacttacaact 489
              ||||||||||||||||||||||||
Sbjct: 131013 tcacacttttatttacttacaact 130990



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 638   atgatcatgcaaagcaatatg 658
             |||||||||||||||||||||
Sbjct: 42299 atgatcatgcaaagcaatatg 42279



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>gb|DQ537335.1| Triticum aestivum clones BAC 1031P08; BAC 754K10; BAC 1344C16, complete
              sequence
          Length = 292102

 Score = 48.1 bits (24), Expect = 0.046
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 466    tcacacttttatttacttacaact 489
              ||||||||||||||||||||||||
Sbjct: 148284 tcacacttttatttacttacaact 148307



 Score = 48.1 bits (24), Expect = 0.046
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                      
Query: 468    acacttttatttacttacaacttggtattacatctcgata 507
              ||||||||||||||||||||||   ||||||| |||||||
Sbjct: 162409 acacttttatttacttacaactcactattacaactcgata 162370



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 684    atgatgatggaagttgcatgtcaatatatatctgaatggctat 726
              |||||| ||||||||||||| |||||||| || | ||||||||
Sbjct: 162201 atgatgttggaagttgcatggcaatatatctcggcatggctat 162159



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 638    atgatcatgcaaagcaatatgt 659
              ||||||||||||||||||||||
Sbjct: 232587 atgatcatgcaaagcaatatgt 232566



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>emb|CT009587.1| Triticum turgidum
          Length = 229209

 Score = 48.1 bits (24), Expect = 0.046
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 466    tcacacttttatttacttacaact 489
              ||||||||||||||||||||||||
Sbjct: 213074 tcacacttttatttacttacaact 213051



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 638    atgatcatgcaaagcaatatg 658
              |||||||||||||||||||||
Sbjct: 212906 atgatcatgcaaagcaatatg 212886



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>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness
             locus region
          Length = 129099

 Score = 48.1 bits (24), Expect = 0.046
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 552   agtgtaccgggatgtgcaacgatctagcatga 583
             ||||||||||||||||| ||||||||| ||||
Sbjct: 39864 agtgtaccgggatgtgccacgatctagtatga 39895



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>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence
          Length = 285444

 Score = 48.1 bits (24), Expect = 0.046
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 466  tcacacttttatttacttacaact 489
            ||||||||||||||||||||||||
Sbjct: 3603 tcacacttttatttacttacaact 3580



 Score = 48.1 bits (24), Expect = 0.046
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 466    tcacacttttatttacttacaact 489
              ||||||||||||||||||||||||
Sbjct: 222054 tcacacttttatttacttacaact 222077



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 638    atgatcatgcaaagcaatatg 658
              |||||||||||||||||||||
Sbjct: 142899 atgatcatgcaaagcaatatg 142879



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 638    atgatcatgcaaagcaatatg 658
              |||||||||||||||||||||
Sbjct: 229291 atgatcatgcaaagcaatatg 229311



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>gb|AY188516.1| Leymus mollis clone pLmIs1 Sabrina-like transposon, partial
           sequence
          Length = 1277

 Score = 48.1 bits (24), Expect = 0.046
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 466 tcacacttttatttacttacaact 489
           ||||||||||||||||||||||||
Sbjct: 944 tcacacttttatttacttacaact 967



 Score = 48.1 bits (24), Expect = 0.046
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 687  atgatggaagttgcatgtcaatatatatctgaatggctat 726
            ||||||||||||||||| |||||||| |  ||||||||||
Sbjct: 1124 atgatggaagttgcatggcaatatatcttggaatggctat 1163



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>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence
          Length = 133625

 Score = 48.1 bits (24), Expect = 0.046
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 466   tcacacttttatttacttacaact 489
             ||||||||||||||||||||||||
Sbjct: 36898 tcacacttttatttacttacaact 36921



 Score = 48.1 bits (24), Expect = 0.046
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 691   tggaagttgcatgtcaatatatatctgaatggctat 726
             ||||||||||||| |||||||| |||||||| ||||
Sbjct: 82961 tggaagttgcatgacaatatatctctgaatgactat 82996



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 638   atgatcatgcaaagcaatatg 658
             |||||||||||||||||||||
Sbjct: 37066 atgatcatgcaaagcaatatg 37086



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>emb|Z26333.1|HVPRB1X H.vulgare gene for pathogenesis-related protein
          Length = 1917

 Score = 48.1 bits (24), Expect = 0.046
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 695 agttgcatgtcaatatatatctgaatggctat 726
           ||||||||| ||||||||||| ||||||||||
Sbjct: 642 agttgcatggcaatatatatcggaatggctat 611



 Score = 48.1 bits (24), Expect = 0.046
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 556 taccgggatgtgcaacgatctagc 579
           ||||||||||||||||||||||||
Sbjct: 750 taccgggatgtgcaacgatctagc 727



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>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13,
             complete sequence
          Length = 102842

 Score = 48.1 bits (24), Expect = 0.046
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 466   tcacacttttatttacttacaact 489
             ||||||||||||||||||||||||
Sbjct: 51206 tcacacttttatttacttacaact 51229



 Score = 48.1 bits (24), Expect = 0.046
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 552   agtgtaccgggatgtgcaacgatctagc 579
             |||||| |||||||||||||||||||||
Sbjct: 51273 agtgtatcgggatgtgcaacgatctagc 51300



 Score = 48.1 bits (24), Expect = 0.046
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 691   tggaagttgcatgtcaatatatatctgaatggctat 726
             ||||||||||||| |||||||| || ||||||||||
Sbjct: 51392 tggaagttgcatggcaatatatctcagaatggctat 51427



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>gb|AF078801.1|AF078801 Hordeum vulgare degenerate retrotransposon cereba polyprotein
             pseudogene, partial sequence
          Length = 15230

 Score = 48.1 bits (24), Expect = 0.046
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 466   tcacacttttatttacttacaact 489
             ||||||||||||||||||||||||
Sbjct: 14087 tcacacttttatttacttacaact 14110



 Score = 48.1 bits (24), Expect = 0.046
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 552   agtgtaccgggatgtgcaacgatctagc 579
             ||||||||||||| ||||||||||||||
Sbjct: 14154 agtgtaccgggatatgcaacgatctagc 14181



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>gb|AY509202.1| Triticum aestivum transposon, partial sequence
          Length = 1811

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 45/51 (88%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                              
Query: 604 tggtagctttgccacaaacactatatcatcctgtatgatcatgcaaagcaa 654
           |||| ||||||||||||| |||||||||  ||  |||||||||||||||||
Sbjct: 544 tggtggctttgccacaaatactatatca-actacatgatcatgcaaagcaa 495



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>gb|AF532104.1|AF532104S1 Aegilops tauschii strain TA1649 cosmid 69-7-1 Lr21 gene, complete
           cds; and unknown gene
          Length = 27960

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 553 gtgtaccgggatgtgcaacgatctagc 579
           |||||||||||||||||| ||||||||
Sbjct: 338 gtgtaccgggatgtgcaatgatctagc 312



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>emb|CT009625.1| Aegilops tauschii
          Length = 117310

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 65/78 (83%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                         
Query: 581   tgacatgtataaaaaattatagttggtagctttgccacaaacactatatcatcctgtatg 640
             |||||||||| |||||||||   |||| ||||||||||||| || || |||  ||  |||
Sbjct: 92662 tgacatgtatgaaaaattatgcatggtggctttgccacaaatacgatgtca-actacatg 92720

                               
Query: 641   atcatgcaaagcaatatg 658
             ||||||||| ||||||||
Sbjct: 92721 atcatgcaaggcaatatg 92738



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>emb|CR626926.1| Aegilops tauschii
          Length = 94421

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 65/78 (83%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                         
Query: 581   tgacatgtataaaaaattatagttggtagctttgccacaaacactatatcatcctgtatg 640
             |||||||||| |||||||||   |||| ||||||||||||| || || |||  ||  |||
Sbjct: 69773 tgacatgtatgaaaaattatgcatggtggctttgccacaaatacgatgtca-actacatg 69831

                               
Query: 641   atcatgcaaagcaatatg 658
             ||||||||| ||||||||
Sbjct: 69832 atcatgcaaggcaatatg 69849



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>emb|CR387926.5| Zebrafish DNA sequence from clone CH211-247J4 in linkage group 15,
              complete sequence
          Length = 141283

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 465    ctcacacttttatttacttaca 486
              ||||||||||||||||||||||
Sbjct: 137243 ctcacacttttatttacttaca 137222



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>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence
          Length = 27905053

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 53       tccgccgccctcctccagctc 73
                |||||||||||||||||||||
Sbjct: 23208205 tccgccgccctcctccagctc 23208225



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>gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, complete sequence
          Length = 142018

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 638   atgatcatgcaaagcaatatg 658
             |||||||||||||||||||||
Sbjct: 18677 atgatcatgcaaagcaatatg 18697



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>gb|AF497474.1| Aegilops tauschii leucine-rich-like protein gene, partial cds; seed
             globulin (Glo-2) gene, complete cds; HMW-glutenin
             (Glu-Dty) gene, Glu-Dty-T2 allele, complete cds; and
             HMW-glutenin (HMW) gene, HMW-Dtx2 allele, complete cds
          Length = 102842

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 638   atgatcatgcaaagcaatatg 658
             |||||||||||||||||||||
Sbjct: 23657 atgatcatgcaaagcaatatg 23637



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>gb|AC008285.7| Drosophila melanogaster clone BACR31P16, complete sequence
          Length = 177084

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 53    tccgccgccctcctccagctc 73
             |||||||||||||||||||||
Sbjct: 35783 tccgccgccctcctccagctc 35803



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>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence
          Length = 101101

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 638   atgatcatgcaaagcaatatg 658
             |||||||||||||||||||||
Sbjct: 36814 atgatcatgcaaagcaatatg 36834



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>ref|NM_079806.2| Drosophila melanogaster sidestep CG31062-RA (side), mRNA
          Length = 2820

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 53   tccgccgccctcctccagctc 73
            |||||||||||||||||||||
Sbjct: 2580 tccgccgccctcctccagctc 2560



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>gb|AF358267.1|AF358267 Drosophila melanogaster sidestep mRNA, complete cds
          Length = 2820

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 53   tccgccgccctcctccagctc 73
            |||||||||||||||||||||
Sbjct: 2580 tccgccgccctcctccagctc 2560



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>gb|AC008135.12|AC008135 Drosophila melanogaster, chromosome 3R, region 98A-98A, BAC clone
             BACR27H07, complete sequence
          Length = 168306

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 53    tccgccgccctcctccagctc 73
             |||||||||||||||||||||
Sbjct: 67590 tccgccgccctcctccagctc 67610



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>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence
          Length = 187012

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 638    atgatcatgcaaagcaatatg 658
              |||||||||||||||||||||
Sbjct: 109095 atgatcatgcaaagcaatatg 109075



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>gb|AC133938.4| Mus musculus BAC clone RP23-399J17 from 3, complete sequence
          Length = 208906

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 456    ggaacaatgctcacactttta 476
              |||||||||||||||||||||
Sbjct: 127170 ggaacaatgctcacactttta 127190



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>emb|AL954313.6| Zebrafish DNA sequence from clone CH211-257J20 in linkage group 11,
             complete sequence
          Length = 156381

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 465   ctcacacttttatttacttac 485
             |||||||||||||||||||||
Sbjct: 51792 ctcacacttttatttacttac 51772



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>gb|U23520.2| Caenorhabditis elegans cosmid C35B8, complete sequence
          Length = 34464

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 468  acacttttatttacttacaac 488
            |||||||||||||||||||||
Sbjct: 2949 acacttttatttacttacaac 2929


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 114,437,019
Number of extensions: 5527705
Number of successful extensions: 104160
Number of sequences better than 10.0: 37
Number of HSP's gapped: 104159
Number of HSP's successfully gapped: 65
Length of query: 749
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 727
Effective length of database: 18,508,616,841
Effective search space: 13455764443407
Effective search space used: 13455764443407
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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