| Clone Name | FLbaf61j05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 67.9 bits (34), Expect = 5e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 681 tatatgatgatggaagttgcatgtcaatatatatctgaatggctat 726 ||||||||||||||||||||||| |||||||| || |||||||||| Sbjct: 279680 tatatgatgatggaagttgcatggcaatatatctcggaatggctat 279725 Score = 50.1 bits (25), Expect = 0.012 Identities = 28/29 (96%) Strand = Plus / Plus Query: 553 gtgtaccgggatgtgcaacgatctagcat 581 |||||||||||||||||| |||||||||| Sbjct: 279556 gtgtaccgggatgtgcaatgatctagcat 279584
>gb|DQ871219.1| Triticum turgidum subsp. dicoccoides clones BAC 409D13 and BAC 916O17, complete sequence Length = 245486 Score = 63.9 bits (32), Expect = 8e-07 Identities = 79/92 (85%), Gaps = 2/92 (2%) Strand = Plus / Plus Query: 637 tatgatcatgcaaagcaatatgtagatggatggactagtcatat-tat-atgatgatgga 694 |||||||||||||||||||||| ||| ||| | |||||| | ||| ||||||||||| Sbjct: 106150 tatgatcatgcaaagcaatatgacaatgaatgctcaagtcatgtatatgatgatgatgga 106209 Query: 695 agttgcatgtcaatatatatctgaatggctat 726 ||||||||| |||||||| || |||||||||| Sbjct: 106210 agttgcatggcaatatatctcggaatggctat 106241 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 684 atgatgatggaagttgcatgtcaatatatatctgaatggctat 726 |||||| ||||||||||||| |||||||| || |||||||||| Sbjct: 162310 atgatggtggaagttgcatggcaatatatctcggaatggctat 162268 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 466 tcacacttttatttacttacaacttggtattacatctcgata 507 |||||||||||||||||||||||| ||||||| ||||||| Sbjct: 105988 tcacacttttatttacttacaactcaatattacaactcgata 106029
>gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, complete sequence Length = 111912 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 684 atgatgatggaagttgcatgtcaatatatatctgaatggctat 726 |||||||||||||||||||| |||||||| || |||||||||| Sbjct: 91544 atgatgatggaagttgcatggcaatatatctcggaatggctat 91502
>gb|DQ175928.1| Hordeum vulgare subsp. vulgare clone 33-15A-LB flanking T-DNA insertion sequence Length = 721 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 552 agtgtaccgggatgtgcaacgatctagc 579 |||||||||||||||||||||||||||| Sbjct: 572 agtgtaccgggatgtgcaacgatctagc 545 Score = 48.1 bits (24), Expect = 0.046 Identities = 24/24 (100%) Strand = Plus / Minus Query: 466 tcacacttttatttacttacaact 489 |||||||||||||||||||||||| Sbjct: 639 tcacacttttatttacttacaact 616
>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence Length = 307015 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 684 atgatgatggaagttgcatgtcaatatatatctgaatggctat 726 |||||| ||||||||||||| |||||||| || |||||||||| Sbjct: 143151 atgatgttggaagttgcatggcaatatatctcggaatggctat 143109 Score = 48.1 bits (24), Expect = 0.046 Identities = 24/24 (100%) Strand = Plus / Plus Query: 466 tcacacttttatttacttacaact 489 |||||||||||||||||||||||| Sbjct: 129236 tcacacttttatttacttacaact 129259 Score = 48.1 bits (24), Expect = 0.046 Identities = 36/40 (90%) Strand = Plus / Minus Query: 468 acacttttatttacttacaacttggtattacatctcgata 507 |||||||||||||||||||||| ||||||| ||||||| Sbjct: 143358 acacttttatttacttacaactcactattacaactcgata 143319 Score = 44.1 bits (22), Expect = 0.71 Identities = 22/22 (100%) Strand = Plus / Minus Query: 638 atgatcatgcaaagcaatatgt 659 |||||||||||||||||||||| Sbjct: 213591 atgatcatgcaaagcaatatgt 213570
>gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC clone 773k14, complete sequence Length = 113510 Score = 54.0 bits (27), Expect = 7e-04 Identities = 142/178 (79%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 552 agtgtaccgggatgtgcaacgatctagcatgacatgtataaaaa--attatagttggtag 609 |||||||| |||| ||||| |||||||| |||||||||| |||| || || | || | Sbjct: 9583 agtgtaccaggatatgcaatgatctagcgtgacatgtatcaaaaccatgatggaaagtgg 9642 Query: 610 ctttgccacaaacactatatcatc-ctgtatgatcatgcaaagcaatatgtagatggatg 668 |||||||||||| ||||| | | | || ||||||||| |||||||||| | |||| | | Sbjct: 9643 ctttgccacaaatactatgtgagctctatatgatcattcaaagcaataggacgatgaacg 9702 Query: 669 gactagtcatattatatgatgatggaagttgcatgtcaatatatatctgaatggctat 726 ||||||||| | | ||| ||||||| ||||||| ||| |||||| |||||||||| Sbjct: 9703 aactagtcatgtgaagtgacgatggaatttgcatggcaacatatattggaatggctat 9760
>gb|DQ175976.1| Hordeum vulgare subsp. vulgare clone 41-1A-RB flanking T-DNA insertion sequence Length = 897 Score = 54.0 bits (27), Expect = 7e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 552 agtgtaccgggatgtgcaacgatctag 578 ||||||||||||||||||||||||||| Sbjct: 27 agtgtaccgggatgtgcaacgatctag 1
>gb|DQ175916.1| Hordeum vulgare subsp. vulgare clone 29-25A-LB flanking T-DNA insertion sequence Length = 769 Score = 54.0 bits (27), Expect = 7e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 640 gatcatgcaaagcaatatgtagatggatggactagtcatattatatgatgatggaagttg 699 |||||||||||| ||||| ||||| | || |||||||| | |||||| ||||||||| Sbjct: 372 gatcatgcaaagtgatatgacaatggaagtacaagtcatatgaaatgatggtggaagttg 313 Query: 700 catgtcaatatatatctgaatggctat 726 |||| |||||||| || |||| ||||| Sbjct: 312 catggcaatatatctcggaattgctat 286 Score = 42.1 bits (21), Expect = 2.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 467 cacacttttatttacttacaacttg 491 ||||||| ||||||||||||||||| Sbjct: 530 cacacttctatttacttacaacttg 506
>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence Length = 215241 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 684 atgatgatggaagttgcatgtcaatatatatctgaatggctat 726 |||||| ||||||||||||| |||||||| || |||||||||| Sbjct: 12227 atgatggtggaagttgcatggcaatatatctcggaatggctat 12269
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome condensation factor (CCF), putative resistance protein (RGA-2), putative resistance protein (RGA2) and putative nodulin-like-like protein (NLL) gene, complete cds; and retrotransposons Josephine, Angela-2, Angela-4, Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5, Barbara, Isabelle, Erika-2, and Claudia Length = 211009 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 466 tcacacttttatttacttacaacttggtattacatctcgata 507 |||||||||||||||||||||||| ||||||| ||||||| Sbjct: 183563 tcacacttttatttacttacaactcaatattacaactcgata 183604 Score = 46.1 bits (23), Expect = 0.18 Identities = 26/27 (96%) Strand = Plus / Plus Query: 686 gatgatggaagttgcatgtcaatatat 712 |||||||||||||||||| |||||||| Sbjct: 183775 gatgatggaagttgcatggcaatatat 183801 Score = 44.1 bits (22), Expect = 0.71 Identities = 22/22 (100%) Strand = Plus / Plus Query: 637 tatgatcatgcaaagcaatatg 658 |||||||||||||||||||||| Sbjct: 183725 tatgatcatgcaaagcaatatg 183746 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 638 atgatcatgcaaagcaatatg 658 ||||||||||||||||||||| Sbjct: 87720 atgatcatgcaaagcaatatg 87700 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 466 tcacacttttatttacttaca 486 ||||||||||||||||||||| Sbjct: 87889 tcacacttttatttacttaca 87869
>gb|DQ537337.1| Triticum aestivum clone BAC 897M20, complete sequence Length = 152010 Score = 48.1 bits (24), Expect = 0.046 Identities = 24/24 (100%) Strand = Plus / Minus Query: 466 tcacacttttatttacttacaact 489 |||||||||||||||||||||||| Sbjct: 131013 tcacacttttatttacttacaact 130990 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 638 atgatcatgcaaagcaatatg 658 ||||||||||||||||||||| Sbjct: 42299 atgatcatgcaaagcaatatg 42279
>gb|DQ537335.1| Triticum aestivum clones BAC 1031P08; BAC 754K10; BAC 1344C16, complete sequence Length = 292102 Score = 48.1 bits (24), Expect = 0.046 Identities = 24/24 (100%) Strand = Plus / Plus Query: 466 tcacacttttatttacttacaact 489 |||||||||||||||||||||||| Sbjct: 148284 tcacacttttatttacttacaact 148307 Score = 48.1 bits (24), Expect = 0.046 Identities = 36/40 (90%) Strand = Plus / Minus Query: 468 acacttttatttacttacaacttggtattacatctcgata 507 |||||||||||||||||||||| ||||||| ||||||| Sbjct: 162409 acacttttatttacttacaactcactattacaactcgata 162370 Score = 46.1 bits (23), Expect = 0.18 Identities = 38/43 (88%) Strand = Plus / Minus Query: 684 atgatgatggaagttgcatgtcaatatatatctgaatggctat 726 |||||| ||||||||||||| |||||||| || | |||||||| Sbjct: 162201 atgatgttggaagttgcatggcaatatatctcggcatggctat 162159 Score = 44.1 bits (22), Expect = 0.71 Identities = 22/22 (100%) Strand = Plus / Minus Query: 638 atgatcatgcaaagcaatatgt 659 |||||||||||||||||||||| Sbjct: 232587 atgatcatgcaaagcaatatgt 232566
>emb|CT009587.1| Triticum turgidum Length = 229209 Score = 48.1 bits (24), Expect = 0.046 Identities = 24/24 (100%) Strand = Plus / Minus Query: 466 tcacacttttatttacttacaact 489 |||||||||||||||||||||||| Sbjct: 213074 tcacacttttatttacttacaact 213051 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 638 atgatcatgcaaagcaatatg 658 ||||||||||||||||||||| Sbjct: 212906 atgatcatgcaaagcaatatg 212886
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 48.1 bits (24), Expect = 0.046 Identities = 30/32 (93%) Strand = Plus / Plus Query: 552 agtgtaccgggatgtgcaacgatctagcatga 583 ||||||||||||||||| ||||||||| |||| Sbjct: 39864 agtgtaccgggatgtgccacgatctagtatga 39895
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 48.1 bits (24), Expect = 0.046 Identities = 24/24 (100%) Strand = Plus / Minus Query: 466 tcacacttttatttacttacaact 489 |||||||||||||||||||||||| Sbjct: 3603 tcacacttttatttacttacaact 3580 Score = 48.1 bits (24), Expect = 0.046 Identities = 24/24 (100%) Strand = Plus / Plus Query: 466 tcacacttttatttacttacaact 489 |||||||||||||||||||||||| Sbjct: 222054 tcacacttttatttacttacaact 222077 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 638 atgatcatgcaaagcaatatg 658 ||||||||||||||||||||| Sbjct: 142899 atgatcatgcaaagcaatatg 142879 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 638 atgatcatgcaaagcaatatg 658 ||||||||||||||||||||| Sbjct: 229291 atgatcatgcaaagcaatatg 229311
>gb|AY188516.1| Leymus mollis clone pLmIs1 Sabrina-like transposon, partial sequence Length = 1277 Score = 48.1 bits (24), Expect = 0.046 Identities = 24/24 (100%) Strand = Plus / Plus Query: 466 tcacacttttatttacttacaact 489 |||||||||||||||||||||||| Sbjct: 944 tcacacttttatttacttacaact 967 Score = 48.1 bits (24), Expect = 0.046 Identities = 36/40 (90%) Strand = Plus / Plus Query: 687 atgatggaagttgcatgtcaatatatatctgaatggctat 726 ||||||||||||||||| |||||||| | |||||||||| Sbjct: 1124 atgatggaagttgcatggcaatatatcttggaatggctat 1163
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 48.1 bits (24), Expect = 0.046 Identities = 24/24 (100%) Strand = Plus / Plus Query: 466 tcacacttttatttacttacaact 489 |||||||||||||||||||||||| Sbjct: 36898 tcacacttttatttacttacaact 36921 Score = 48.1 bits (24), Expect = 0.046 Identities = 33/36 (91%) Strand = Plus / Plus Query: 691 tggaagttgcatgtcaatatatatctgaatggctat 726 ||||||||||||| |||||||| |||||||| |||| Sbjct: 82961 tggaagttgcatgacaatatatctctgaatgactat 82996 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 638 atgatcatgcaaagcaatatg 658 ||||||||||||||||||||| Sbjct: 37066 atgatcatgcaaagcaatatg 37086
>emb|Z26333.1|HVPRB1X H.vulgare gene for pathogenesis-related protein Length = 1917 Score = 48.1 bits (24), Expect = 0.046 Identities = 30/32 (93%) Strand = Plus / Minus Query: 695 agttgcatgtcaatatatatctgaatggctat 726 ||||||||| ||||||||||| |||||||||| Sbjct: 642 agttgcatggcaatatatatcggaatggctat 611 Score = 48.1 bits (24), Expect = 0.046 Identities = 24/24 (100%) Strand = Plus / Minus Query: 556 taccgggatgtgcaacgatctagc 579 |||||||||||||||||||||||| Sbjct: 750 taccgggatgtgcaacgatctagc 727
>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13, complete sequence Length = 102842 Score = 48.1 bits (24), Expect = 0.046 Identities = 24/24 (100%) Strand = Plus / Plus Query: 466 tcacacttttatttacttacaact 489 |||||||||||||||||||||||| Sbjct: 51206 tcacacttttatttacttacaact 51229 Score = 48.1 bits (24), Expect = 0.046 Identities = 27/28 (96%) Strand = Plus / Plus Query: 552 agtgtaccgggatgtgcaacgatctagc 579 |||||| ||||||||||||||||||||| Sbjct: 51273 agtgtatcgggatgtgcaacgatctagc 51300 Score = 48.1 bits (24), Expect = 0.046 Identities = 33/36 (91%) Strand = Plus / Plus Query: 691 tggaagttgcatgtcaatatatatctgaatggctat 726 ||||||||||||| |||||||| || |||||||||| Sbjct: 51392 tggaagttgcatggcaatatatctcagaatggctat 51427
>gb|AF078801.1|AF078801 Hordeum vulgare degenerate retrotransposon cereba polyprotein pseudogene, partial sequence Length = 15230 Score = 48.1 bits (24), Expect = 0.046 Identities = 24/24 (100%) Strand = Plus / Plus Query: 466 tcacacttttatttacttacaact 489 |||||||||||||||||||||||| Sbjct: 14087 tcacacttttatttacttacaact 14110 Score = 48.1 bits (24), Expect = 0.046 Identities = 27/28 (96%) Strand = Plus / Plus Query: 552 agtgtaccgggatgtgcaacgatctagc 579 ||||||||||||| |||||||||||||| Sbjct: 14154 agtgtaccgggatatgcaacgatctagc 14181
>gb|AY509202.1| Triticum aestivum transposon, partial sequence Length = 1811 Score = 46.1 bits (23), Expect = 0.18 Identities = 45/51 (88%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 604 tggtagctttgccacaaacactatatcatcctgtatgatcatgcaaagcaa 654 |||| ||||||||||||| ||||||||| || ||||||||||||||||| Sbjct: 544 tggtggctttgccacaaatactatatca-actacatgatcatgcaaagcaa 495
>gb|AF532104.1|AF532104S1 Aegilops tauschii strain TA1649 cosmid 69-7-1 Lr21 gene, complete cds; and unknown gene Length = 27960 Score = 46.1 bits (23), Expect = 0.18 Identities = 26/27 (96%) Strand = Plus / Minus Query: 553 gtgtaccgggatgtgcaacgatctagc 579 |||||||||||||||||| |||||||| Sbjct: 338 gtgtaccgggatgtgcaatgatctagc 312
>emb|CT009625.1| Aegilops tauschii Length = 117310 Score = 44.1 bits (22), Expect = 0.71 Identities = 65/78 (83%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 581 tgacatgtataaaaaattatagttggtagctttgccacaaacactatatcatcctgtatg 640 |||||||||| ||||||||| |||| ||||||||||||| || || ||| || ||| Sbjct: 92662 tgacatgtatgaaaaattatgcatggtggctttgccacaaatacgatgtca-actacatg 92720 Query: 641 atcatgcaaagcaatatg 658 ||||||||| |||||||| Sbjct: 92721 atcatgcaaggcaatatg 92738
>emb|CR626926.1| Aegilops tauschii Length = 94421 Score = 44.1 bits (22), Expect = 0.71 Identities = 65/78 (83%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 581 tgacatgtataaaaaattatagttggtagctttgccacaaacactatatcatcctgtatg 640 |||||||||| ||||||||| |||| ||||||||||||| || || ||| || ||| Sbjct: 69773 tgacatgtatgaaaaattatgcatggtggctttgccacaaatacgatgtca-actacatg 69831 Query: 641 atcatgcaaagcaatatg 658 ||||||||| |||||||| Sbjct: 69832 atcatgcaaggcaatatg 69849
>emb|CR387926.5| Zebrafish DNA sequence from clone CH211-247J4 in linkage group 15, complete sequence Length = 141283 Score = 44.1 bits (22), Expect = 0.71 Identities = 22/22 (100%) Strand = Plus / Minus Query: 465 ctcacacttttatttacttaca 486 |||||||||||||||||||||| Sbjct: 137243 ctcacacttttatttacttaca 137222
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 tccgccgccctcctccagctc 73 ||||||||||||||||||||| Sbjct: 23208205 tccgccgccctcctccagctc 23208225
>gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, complete sequence Length = 142018 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 638 atgatcatgcaaagcaatatg 658 ||||||||||||||||||||| Sbjct: 18677 atgatcatgcaaagcaatatg 18697
>gb|AF497474.1| Aegilops tauschii leucine-rich-like protein gene, partial cds; seed globulin (Glo-2) gene, complete cds; HMW-glutenin (Glu-Dty) gene, Glu-Dty-T2 allele, complete cds; and HMW-glutenin (HMW) gene, HMW-Dtx2 allele, complete cds Length = 102842 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 638 atgatcatgcaaagcaatatg 658 ||||||||||||||||||||| Sbjct: 23657 atgatcatgcaaagcaatatg 23637
>gb|AC008285.7| Drosophila melanogaster clone BACR31P16, complete sequence Length = 177084 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 tccgccgccctcctccagctc 73 ||||||||||||||||||||| Sbjct: 35783 tccgccgccctcctccagctc 35803
>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence Length = 101101 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 638 atgatcatgcaaagcaatatg 658 ||||||||||||||||||||| Sbjct: 36814 atgatcatgcaaagcaatatg 36834
>ref|NM_079806.2| Drosophila melanogaster sidestep CG31062-RA (side), mRNA Length = 2820 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 tccgccgccctcctccagctc 73 ||||||||||||||||||||| Sbjct: 2580 tccgccgccctcctccagctc 2560
>gb|AF358267.1|AF358267 Drosophila melanogaster sidestep mRNA, complete cds Length = 2820 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 tccgccgccctcctccagctc 73 ||||||||||||||||||||| Sbjct: 2580 tccgccgccctcctccagctc 2560
>gb|AC008135.12|AC008135 Drosophila melanogaster, chromosome 3R, region 98A-98A, BAC clone BACR27H07, complete sequence Length = 168306 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 tccgccgccctcctccagctc 73 ||||||||||||||||||||| Sbjct: 67590 tccgccgccctcctccagctc 67610
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 638 atgatcatgcaaagcaatatg 658 ||||||||||||||||||||| Sbjct: 109095 atgatcatgcaaagcaatatg 109075
>gb|AC133938.4| Mus musculus BAC clone RP23-399J17 from 3, complete sequence Length = 208906 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 456 ggaacaatgctcacactttta 476 ||||||||||||||||||||| Sbjct: 127170 ggaacaatgctcacactttta 127190
>emb|AL954313.6| Zebrafish DNA sequence from clone CH211-257J20 in linkage group 11, complete sequence Length = 156381 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 465 ctcacacttttatttacttac 485 ||||||||||||||||||||| Sbjct: 51792 ctcacacttttatttacttac 51772
>gb|U23520.2| Caenorhabditis elegans cosmid C35B8, complete sequence Length = 34464 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 468 acacttttatttacttacaac 488 ||||||||||||||||||||| Sbjct: 2949 acacttttatttacttacaac 2929 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 114,437,019 Number of extensions: 5527705 Number of successful extensions: 104160 Number of sequences better than 10.0: 37 Number of HSP's gapped: 104159 Number of HSP's successfully gapped: 65 Length of query: 749 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 727 Effective length of database: 18,508,616,841 Effective search space: 13455764443407 Effective search space used: 13455764443407 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)