ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf63p07 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os03g59710:12003.t05216:unspliced-genomic pre-mRNA branch site p14-like protein, putative, expressed| Length = 839 Score = 242 bits (523), Expect = 2e-63 Identities = 106/142 (74%), Positives = 111/142 (78%) Frame = +1 / +2 Query: 13 NRAPNQTETKPXXXXXXXXXSLRKGNARLPPEVNRALFVRNLPFNISSEEMYDIFGKYGA 192 NR P +TET SLRK NARLPPEVNR L+VRNLPFNISSEEMYDIFGKYGA Sbjct: 41 NRKPRETETLAERRAAMAAVSLRKSNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGA 220 Query: 193 IRQIRLGNAKDTRGTAYVVYEDIYDAKNAVDHLSGFNVANRYLIVLYSQLNKMSXXXXXX 372 IRQIRLGNAKDTRGTA+VVYEDIYDAKNAVDHLSGFNVANRYLIVLY Q KMS Sbjct: 221 IRQIRLGNAKDTRGTAFVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQPAKMSKKSDVK 400 Query: 373 XXXXXXXRLQEKYGIGSKTPSA 438 RLQEKYG+GSKTPS+ Sbjct: 401 KKEEEITRLQEKYGLGSKTPSS 466 Score = 221 bits (478), Expect = 3e-57 Identities = 108/140 (77%), Positives = 110/140 (78%) Frame = -3 / -3 Query: 434 EGVLDPMPYFSWSLVISSSFFLMSVFLDILLSCE*STMR*RLATLKPERWSTAFLAS*MS 255 EGVL+P PYFS SLVISSSFFL S FLDIL *STMR*RLATLKPERWSTAFLAS*MS Sbjct: 462 EGVLEPRPYFSCSLVISSSFFLTSDFLDILAGW**STMR*RLATLKPERWSTAFLAS*MS 283 Query: 254 SYTTYAVPRVSLALPSRICRMAPYLPKMSYISSLEMLNGRFRTNSALFTSGGSLAFPFLK 75 S TT AVP VSLA PSRICR+APYLPKMSYISSLEMLNGRFRT S LFTSGGSLA FLK Sbjct: 282 S*TTKAVPLVSLAFPSRICRIAPYLPKMSYISSLEMLNGRFRTYSTLFTSGGSLALLFLK 103 Query: 74 LXXXXXXXX*GLVSVWLGAR 15 L VSV G R Sbjct: 102 LTAAIAALLSARVSVSRGFR 43 Score = 98.2 bits (208), Expect(3) = 3e-26 Identities = 41/46 (89%), Positives = 41/46 (89%) Frame = -2 / -2 Query: 210 QPDLPDGPVLAEDVVHLLARDVERQVPHEQRPVHLRRQPRVPLPQA 73 QPDLPD VLAEDVVHLLARDVERQVPH Q PVHLRRQPRV LPQA Sbjct: 238 QPDLPDRAVLAEDVVHLLARDVERQVPHVQHPVHLRRQPRVALPQA 101 Score = 34.1 bits (68), Expect(3) = 3e-26 Identities = 14/15 (93%), Positives = 14/15 (93%) Frame = -2 / -2 Query: 333 VEHDEVAVGDVEARE 289 VEHDEVAVGDVEA E Sbjct: 361 VEHDEVAVGDVEAGE 317 Score = 24.0 bits (46), Expect(3) = 3e-26 Identities = 8/9 (88%), Positives = 8/9 (88%) Frame = -1 / -1 Query: 220 WRCPAGSAG 194 WR PAGSAG Sbjct: 248 WRSPAGSAG 222 Score = 77.1 bits (162), Expect(2) = 8e-25 Identities = 30/36 (83%), Positives = 32/36 (88%) Frame = +3 / +1 Query: 135 PAVQHLERGDVRHLRQVRGHPADPAGQRQGHAGDGV 242 PAVQHLERGDVRHLRQVR PADPAG+RQGH G G+ Sbjct: 163 PAVQHLERGDVRHLRQVRRDPADPAGERQGHQGHGL 270 Score = 56.5 bits (117), Expect(2) = 8e-25 Identities = 26/42 (61%), Positives = 29/42 (69%) Frame = +3 / +1 Query: 327 ALLAAQQDVQEDGHQEEGGRDHQAPGEVRHRIQDPLRQRRLI 452 ALL A QDVQE G QEEGG DHQA GEV R+QD + R + Sbjct: 355 ALLPAGQDVQEVGRQEEGGGDHQAAGEVWPRLQDAFIRPRRV 480
>LOC_Os11g14430:12011.t01274:unspliced-genomic APOBEC1 complementation factor, putative, expressed| Length = 4679 Score = 40.0 bits (81), Expect = 0.017 Identities = 15/37 (40%), Positives = 26/37 (70%) Frame = +1 / +3 Query: 115 RALFVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKD 225 + ++V+NLP N S E++ +IF K+G + ++ L AKD Sbjct: 3405 KTIYVKNLPENASKEKIKEIFEKHGEVTKVVLPPAKD 3515
>LOC_Os07g05640:12007.t00447:unspliced-genomic proton myo-inositol cotransporter, putative, expressed| Length = 3471 Score = 36.8 bits (74), Expect = 0.16 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -2 / -3 Query: 150 DVERQVPHEQRPVHLRRQPRVPLP 79 DV+RQ H Q PV R PRVPLP Sbjct: 2842 DVQRQPRHRQPPVPARAPPRVPLP 2771
>LOC_Os03g58720:12003.t05125:unspliced-genomic RNA-binding protein 28, putative, expressed| Length = 7246 Score = 36.8 bits (74), Expect = 0.16 Identities = 12/29 (41%), Positives = 22/29 (75%) Frame = +1 / +2 Query: 109 VNRALFVRNLPFNISSEEMYDIFGKYGAI 195 ++R LF+ NLPF++S+EE+ + F +G + Sbjct: 4367 LDRTLFISNLPFDLSNEEVTERFSAFGKV 4453
>LOC_Os03g37700:12003.t03222:unspliced-genomic hypothetical protein| Length = 1673 Score = 36.3 bits (73), Expect = 0.21 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -2 / -2 Query: 156 ARDVERQVPHEQRPVHLRRQPRVPLPQA 73 +R R+ PH R HL R PR PLP A Sbjct: 760 SRSPSRRPPHRARATHLLRLPRAPLPHA 677
>LOC_Os03g12430:12003.t01042:unspliced-genomic PPR repeat containing protein, putative, expressed| Length = 1866 Score = 27.6 bits (54), Expect(2) = 0.26 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +3 / -1 Query: 336 AAQQDVQEDGHQEEGGRDHQ 395 A+++ EDG EEGGR H+ Sbjct: 336 ASEERAYEDGSGEEGGRRHR 277 Score = 25.8 bits (50), Expect(2) = 0.26 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = +3 / -3 Query: 153 ERGDVRHLRQVRGHPADPAGQRQGHAGDGV 242 ER +R + GH G+R G G+GV Sbjct: 406 ERERLRRRGEEEGHGGREIGERGGERGEGV 317
>LOC_Os01g71200:12001.t06416:unspliced-genomic RNA binding protein, putative, expressed| Length = 5623 Score = 35.9 bits (72), Expect = 0.29 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +1 / +2 Query: 121 LFVRNLPFNISSEEMYDIFGKYGAIRQIRL 210 LF+ LP N++ E+ D+F KYG I+ +++ Sbjct: 3029 LFIGMLPKNVTDTELTDLFSKYGNIKDLQI 3118
>LOC_Os05g30980:12005.t02696:unspliced-genomic ribonucleoprotein, putative, expressed| Length = 5810 Score = 35.4 bits (71), Expect = 0.40 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +1 / +2 Query: 121 LFVRNLPFNISSEEMYDIFGKYGAIRQIRL 210 LF+ LP N++ EM D+F +YG I+ +++ Sbjct: 3113 LFIGMLPKNVTDAEMTDLFSQYGNIKDLQI 3202
>LOC_Os04g30430:12004.t02729:unspliced-genomic RNA-binding protein-like, putative, expressed| Length = 4966 Score = 35.4 bits (71), Expect = 0.40 Identities = 12/27 (44%), Positives = 21/27 (77%) Frame = +1 / +2 Query: 118 ALFVRNLPFNISSEEMYDIFGKYGAIR 198 A++VRNLP + + E++ + F K+GAI+ Sbjct: 2111 AIYVRNLPLSATPEQLEEAFKKFGAIK 2191
>LOC_Os03g18720:12003.t01642:unspliced-genomic spliceosomal protein, putative, expressed| Length = 4468 Score = 35.4 bits (71), Expect = 0.40 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = +1 / +3 Query: 76 LRKGNARLPPEVNRALFVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAK 222 L K + P N LF++NLP +S + +F +Y R++R+ AK Sbjct: 3711 LGKTSQEPPAPPNNILFIQNLPAETTSMMLQILFQQYPGFREVRMIEAK 3857
>LOC_Os02g44780:12002.t04068:unspliced-genomic geranylgeranyl pyrophosphate synthetase, chloroplast precursor,| putative, expressed Length = 3901 Score = 34.5 bits (69), Expect = 0.76 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +3 / +2 Query: 363 GHQEEGGRDHQAPGEVRHRIQDPLRQRRLILPGRC 467 G ++ G R +APG +R R++ P R R P RC Sbjct: 305 GRRQRGHRQARAPGPLRRRLRAPRRAARGRAPRRC 409
>LOC_Os07g03240:12007.t00214:unspliced-genomic ribonucleoprotein like protein, putative, expressed| Length = 3694 Score = 34.5 bits (69), Expect = 0.76 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +1 / +2 Query: 115 RALFVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDT 228 R LFV +P + E+ FG+YGA+R + + K+T Sbjct: 158 RKLFVGGIPTSAQEAELRGHFGQYGAVRSVIVMRDKET 271
>LOC_Os05g07900:12005.t00671:unspliced-genomic protein brittle-1, chloroplast precursor, putative, expressed| Length = 3868 Score = 34.1 bits (68), Expect = 1.0 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +3 / +2 Query: 429 PLRQRRLILPGRCAAPCLV*KSSRETVCNLCLA 527 PLRQRR LPG + SR VC +CLA Sbjct: 707 PLRQRRRRLPGDLLELAVAAGRSRRPVCQVCLA 805
>LOC_Os04g50110:12004.t04524:unspliced-genomic plastid-specific 30S ribosomal protein 2, chloroplast precursor,| putative, expressed Length = 3110 Score = 34.1 bits (68), Expect = 1.0 Identities = 11/37 (29%), Positives = 23/37 (62%) Frame = +1 / +1 Query: 106 EVNRALFVRNLPFNISSEEMYDIFGKYGAIRQIRLGN 216 E R L+V N+P++ + E+ +F + GA++ + + N Sbjct: 253 EKRRKLYVANIPWSFPAPEIEKLFAQCGAVKDVEVSN 363
>LOC_Os03g32180:12003.t02812:unspliced-genomic polygalacturonase inhibitor 1 precursor, putative| Length = 1420 Score = 28.1 bits (55), Expect(2) = 1.4 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -1 / +3 Query: 553 EPPQTKHTAAKHRLQ 509 +PPQ +H A +HRLQ Sbjct: 405 QPPQRRHPAHRHRLQ 449 Score = 25.8 bits (50), Expect(2) = 1.4 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = -2 / +3 Query: 165 HLLARDVERQVPHEQRPVHLRRQ 97 H L Q PH PVH+RR+ Sbjct: 438 HRLQPPPRGQPPHRHAPVHVRRR 506
>LOC_Os05g04140:12005.t00310:unspliced-genomic hypothetical protein| Length = 333 Score = 33.6 bits (67), Expect = 1.4 Identities = 16/34 (47%), Positives = 18/34 (52%) Frame = +3 / +3 Query: 369 QEEGGRDHQAPGEVRHRIQDPLRQRRLILPGRCA 470 Q GG H + E R R + PLR RR PGR A Sbjct: 207 QGSGGARHASAVEGRRRRRRPLRLRRAFRPGRAA 308
>LOC_Os04g19260:12004.t01666:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4448 Score = 33.6 bits (67), Expect = 1.4 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = +3 / -3 Query: 384 RDHQAPGEVRHRIQDPLRQRRLILPGRCAAPC 479 R HQ P VRH + R L PGR +PC Sbjct: 3087 RSHQ*PSTVRHVYRRRSRHGELATPGRTTSPC 2992
>LOC_Os10g42299:12010.t03458:unspliced-genomic mitochondrial carnitine/acylcarnitine carrier-like protein, putative,| expressed Length = 5352 Score = 33.6 bits (67), Expect = 1.4 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -2 / -3 Query: 201 LPDGPVLAEDVVHLLARDVERQVPHEQRPVHLRRQPRVPL 82 LP G VL + +VH V R +P ++RP L + P L Sbjct: 4906 LPAGEVLLDRLVHAEHERVPRHLPRQRRPQPLEQPPHAAL 4787
>LOC_Os08g38092:12008.t03545:unspliced-genomic esterase/lipase/thioesterase, putative, expressed| Length = 4788 Score = 33.1 bits (66), Expect = 2.0 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +3 / +1 Query: 156 RGDVRHLRQVRGHPADPAGQRQGHAG 233 RGDV R+VR PA PAG R+G G Sbjct: 229 RGDVLGGREVRVFPARPAGVRRGRRG 306
>LOC_Os03g32190:12003.t02811:unspliced-genomic transposon protein, putative, unclassified, expressed| Length = 2315 Score = 28.1 bits (55), Expect(2) = 2.1 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -1 / -1 Query: 553 EPPQTKHTAAKHRLQ 509 +PPQ +H A +HRLQ Sbjct: 266 QPPQRRHPAHRHRLQ 222 Score = 25.8 bits (50), Expect(2) = 2.1 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = -2 / -1 Query: 165 HLLARDVERQVPHEQRPVHLRRQ 97 H L Q PH PVH+RR+ Sbjct: 233 HRLQPPPRGQPPHRHAPVHVRRR 165
>LOC_Os06g17020:12006.t01574:unspliced-genomic indole-3-acetate beta-glucosyltransferase, putative, expressed| Length = 1756 Score = 32.7 bits (65), Expect = 2.7 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +3 / -3 Query: 339 AQQDVQEDGHQEEGGRDHQAPGEVRHRIQDPLRQRR 446 + + V + GH DH AP R + +PLR+RR Sbjct: 1157 SHRPVPQHGHLRRPPADHLAPAARRRALLEPLRERR 1050
>LOC_Os01g65150:12001.t05881:unspliced-genomic expressed protein| Length = 2103 Score = 32.7 bits (65), Expect = 2.7 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +3 / +3 Query: 153 ERGDVRHLRQVRGHPADPAGQRQGHA 230 ++ VRH ++ RGHP AGQ G A Sbjct: 1239 DQHSVRHRQRARGHPVHQAGQHNGPA 1316
>LOC_Os03g22380:12003.t01989:unspliced-genomic pre-mRNA-splicing factor SF2, putative, expressed| Length = 4789 Score = 32.7 bits (65), Expect = 2.7 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -2 / -1 Query: 183 LAEDVVHLLARDVERQVPHEQRP 115 L E+++HL DV R++PH RP Sbjct: 502 LVEEILHLPLPDVTREIPHVDRP 434
>LOC_Os02g29480:12002.t02642:unspliced-genomic RNA-binding protein-like, putative, expressed| Length = 5420 Score = 32.7 bits (65), Expect = 2.7 Identities = 11/27 (40%), Positives = 20/27 (74%) Frame = +1 / +3 Query: 118 ALFVRNLPFNISSEEMYDIFGKYGAIR 198 A++VR+LP N ++ ++ D F K+G I+ Sbjct: 2370 AIYVRSLPLNATTTQLEDEFKKFGTIK 2450
>LOC_Os03g22270:12003.t01978:unspliced-genomic auxin-repressed protein, putative, expressed| Length = 2420 Score = 27.2 bits (53), Expect(2) = 3.0 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +3 / +2 Query: 330 LLAAQQDVQEDGHQEEGGRDHQA 398 LL+ Q Q DGH E+GG QA Sbjct: 2156 LLSPLQLCQMDGHVEDGGMSFQA 2224 Score = 26.3 bits (51), Expect(2) = 3.0 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +3 / +2 Query: 189 GHPADPAGQRQGHAGDG 239 G PAD AG+ G AG+G Sbjct: 347 GRPADDAGRGGGGAGEG 397
>LOC_Os02g51910:12002.t04772:unspliced-genomic cytokinin-O-glucosyltransferase 2, putative, expressed| Length = 2883 Score = 27.2 bits (53), Expect(2) = 3.4 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +3 / +3 Query: 189 GHPADPAGQRQGHAGDGV 242 GH A P +R+GHA GV Sbjct: 1335 GHQAGPRLRREGHAAGGV 1388 Score = 26.3 bits (51), Expect(2) = 3.4 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +3 / +3 Query: 156 RGDVRHLRQVRGHPADPA 209 +G +RHLRQ+R P PA Sbjct: 261 QGVLRHLRQLRVQPPPPA 314
>LOC_Os05g19500:12005.t01716:unspliced-genomic ATCHX19, putative, expressed| Length = 2877 Score = 26.3 bits (51), Expect(2) = 3.6 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +3 / -1 Query: 156 RGDVRHLRQVRGHPADPAGQR 218 RGDV H R+ GH A+ G++ Sbjct: 894 RGDVVHGRRGHGHAAEVGGEQ 832 Score = 23.1 bits (44), Expect(2) = 3.6 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = +3 / -1 Query: 198 ADPAGQRQGHAGDG 239 ADP + +G AGDG Sbjct: 705 ADPEDEGEGDAGDG 664
>LOC_Os06g49390:12006.t04623:unspliced-genomic NBS-LRR disease resistance protein, putative, expressed| Length = 5041 Score = 32.2 bits (64), Expect = 3.7 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +3 / -3 Query: 459 GRCAAPCLV*KSSRETVCNLCLAAVCFVCGGS 554 G+ A PC + SSR +C L + +C C GS Sbjct: 2762 GQVAPPCPLMCSSRRLLCGLRFSRICSSCEGS 2667
>LOC_Os06g42890:12006.t03979:unspliced-genomic transposon protein, putative, Pong sub-class| Length = 1814 Score = 32.2 bits (64), Expect = 3.7 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 / +1 Query: 339 AQQDVQEDGHQEEGGRDHQAPGEVRHRIQDPL 434 A +D+ +D H+ E D G +RHR+ P+ Sbjct: 31 AARDLDQDAHRPEWDLDQSGIGSMRHRVVPPI 126
>LOC_Os11g47500:12011.t04246:unspliced-genomic xylanase inhibitor protein 1 precursor, putative, expressed| Length = 1718 Score = 32.2 bits (64), Expect = 3.7 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -2 / -3 Query: 162 LLARDVERQVPHEQRPVHLRRQPRVPL 82 +L R V R P E PV +RR+P VPL Sbjct: 996 VLPRQVGRDDPQEDLPVGVRRRPLVPL 916
>LOC_Os08g31649:12008.t02910:unspliced-genomic hypothetical protein| Length = 1186 Score = 32.2 bits (64), Expect = 3.7 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = -2 / +3 Query: 150 DVERQVPHEQRPVHLRRQPRVPL 82 D+E+Q ++RP H RR+PR PL Sbjct: 204 DLEQQGEEDRRPCHERRRPRRPL 272
>LOC_Os08g02390:12008.t00134:unspliced-genomic ribonucleoprotein, chloroplast precursor, putative, expressed| Length = 2478 Score = 32.2 bits (64), Expect = 3.7 Identities = 11/32 (34%), Positives = 19/32 (59%) Frame = +1 / +2 Query: 115 RALFVRNLPFNISSEEMYDIFGKYGAIRQIRL 210 R LFV NLP +++Y++F YG + + + Sbjct: 452 RELFVCNLPRRCDVDDLYELFKPYGTVLSVEV 547
>LOC_Os05g47510:12005.t04187:unspliced-genomic conserved hypothetical protein| Length = 1323 Score = 31.8 bits (63), Expect = 5.1 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = +3 / -1 Query: 351 VQEDGHQEEGGRDHQAPGEVRHRIQDPLRQRRLILPGR 464 V E HQE G RH + +PLR+ +L LP R Sbjct: 738 VAEPPHQEGVGGRVWRHATARHLVDEPLRRAQLTLPAR 625
>LOC_Os01g66000:12001.t05961:unspliced-genomic NADH dehydrogenase I subunit N, putative, expressed| Length = 1528 Score = 31.8 bits (63), Expect = 5.1 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 / -2 Query: 156 RGDVRHLRQVRGHPADPAGQRQGHA 230 R D RH +R PA PAG+R+G A Sbjct: 1497 RHDERHPHVLRRRPASPAGRREGGA 1423
>LOC_Os01g65992:12001.t06842:unspliced-genomic expressed protein| Length = 911 Score = 31.8 bits (63), Expect = 5.1 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 / +3 Query: 156 RGDVRHLRQVRGHPADPAGQRQGHA 230 R D RH +R PA PAG+R+G A Sbjct: 384 RHDERHPHVLRRRPASPAGRREGGA 458
>LOC_Os09g02700:12009.t00169:unspliced-genomic polyadenylate-binding protein 2, putative, expressed| Length = 5156 Score = 31.8 bits (63), Expect = 5.1 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = +1 / +1 Query: 121 LFVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTAY 243 ++V+NL N + +++ +IFGK+G I + D R + Sbjct: 1819 VYVKNLSENTTEDDLKEIFGKFGTITSAVVMREGDGRSKCF 1941
>LOC_Os09g01930:12009.t003548:unspliced-genomic hypothetical protein| Length = 710 Score = 31.8 bits (63), Expect = 5.1 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +1 / -1 Query: 103 PEVNRALFVRNLPFNISSEEMYDIFGKYGAI 195 P ++V NLP+NI SE + +F + G + Sbjct: 308 PPAEAKVYVGNLPYNIDSERLAQLFEQEGVV 216
>LOC_Os05g13630:12005.t01141:unspliced-genomic ribonucleoprotein, chloroplast, putative, expressed| Length = 1134 Score = 31.8 bits (63), Expect = 5.1 Identities = 10/25 (40%), Positives = 17/25 (68%) Frame = +1 / +2 Query: 121 LFVRNLPFNISSEEMYDIFGKYGAI 195 ++V NLP+++ + + D F YGAI Sbjct: 185 VYVGNLPYSVDEQTLMDYFADYGAI 259
>LOC_Os04g58280:12004.t05291:unspliced-genomic stem-specific protein TSJT1, putative, expressed| Length = 1907 Score = 31.8 bits (63), Expect = 5.1 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = -2 / +3 Query: 210 QPDLPDGPVLAEDVVHLLARDVERQVPHEQRPVHLRRQPRV 88 QP+ PD V A +H R +PH RP L R+P V Sbjct: 768 QPEQPDPAVRAVQPLHQRGAARHRGLPHPPRPRPLPRRPVV 890
>LOC_Os04g52200:12004.t04696:unspliced-genomic multiple RNA-binding domain-containing protein 1, putative, expressed| Length = 6619 Score = 31.8 bits (63), Expect = 5.1 Identities = 11/33 (33%), Positives = 22/33 (66%) Frame = +1 / +2 Query: 112 NRALFVRNLPFNISSEEMYDIFGKYGAIRQIRL 210 N + V+NLP++ E++ +F K+G++ +I L Sbjct: 3524 NHVILVKNLPYSSCEEDLATMFRKHGSLDKIIL 3622
>LOC_Os02g39060:12002.t03544:unspliced-genomic RNA binding protein, putative, expressed| Length = 1865 Score = 31.8 bits (63), Expect = 5.1 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = +1 / +1 Query: 100 PPEVNRALFVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDT 228 P +R LFV N+P + +E+ +F ++G I LG + T Sbjct: 556 PTSPDRKLFVDNVPARAAHDELRRLFSRFGEIEAGPLGADRAT 684
>LOC_Os04g52710:12004.t04745:unspliced-genomic imidazoleglycerol-phosphate dehydratase, putative, expressed| Length = 4331 Score = 25.8 bits (50), Expect(2) = 6.3 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +3 / -3 Query: 195 PADPAGQRQGHAGDG 239 P D AG+R GHA +G Sbjct: 156 PGDSAGRRGGHAREG 112 Score = 22.6 bits (43), Expect(2) = 6.3 Identities = 9/19 (47%), Positives = 9/19 (47%) Frame = +3 / -3 Query: 363 GHQEEGGRDHQAPGEVRHR 419 GH EGG D G R R Sbjct: 129 GHAREGGGDEPRGGHRRRR 73
>LOC_Os11g32170:12011.t02814:unspliced-genomic stripe rust resistance protein Yr10, putative| Length = 8390 Score = 31.3 bits (62), Expect = 7.0 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +3 / +3 Query: 366 HQEEGGRDHQAPGEVRHRIQDPLRQRR 446 HQE GG QAPG+V+ R R+RR Sbjct: 381 HQEGGGGGEQAPGKVQDRRPCRRRRRR 461
>LOC_Os11g14280:12011.t01259:unspliced-genomic transposon protein, putative, unclassified| Length = 6360 Score = 31.3 bits (62), Expect = 7.0 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +3 / -3 Query: 441 RRLILPGRCAAPCLV*KSSRETVCNLCLAAVCFVCGGSVSMMNLIRLIAFVLC 599 R L+LP C++ +S+ ++C AV FV G S + + AF +C Sbjct: 1843 RSLVLPNSLIIRCMISTNSKLSICFSKPVAVVFVVGLSSHIFSNTSRTAFHMC 1685
>LOC_Os11g14270:12011.t01258:unspliced-genomic transposon protein, putative, unclassified| Length = 4331 Score = 31.3 bits (62), Expect = 7.0 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +3 / -1 Query: 441 RRLILPGRCAAPCLV*KSSRETVCNLCLAAVCFVCGGSVSMMNLIRLIAFVLC 599 R L+LP C++ +S+ ++C AV FV G S + + AF +C Sbjct: 3365 RSLVLPNSLIIRCMISTNSKLSICFSKPVAVIFVVGLSSHIFSNTSRTAFHMC 3207
>LOC_Os08g38640:12008.t03599:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4297 Score = 31.3 bits (62), Expect = 7.0 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +3 / -3 Query: 435 RQRRLILPGRCAAPCL 482 RQR ++LPGRCAAP + Sbjct: 1961 RQR*ILLPGRCAAPAV 1914
>LOC_Os07g34410:12007.t03117:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 4400 Score = 31.3 bits (62), Expect = 7.0 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +3 / -3 Query: 435 RQRRLILPGRCAAPCL 482 RQR ++LPGRCAAP + Sbjct: 1350 RQR*ILLPGRCAAPAV 1303
>LOC_Os06g43540:12006.t04044:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 4384 Score = 31.3 bits (62), Expect = 7.0 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +3 / -2 Query: 435 RQRRLILPGRCAAPCL 482 RQR ++LPGRCAAP + Sbjct: 1740 RQR*ILLPGRCAAPAV 1693
>LOC_Os05g36940:12005.t03238:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4308 Score = 31.3 bits (62), Expect = 7.0 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +3 / -3 Query: 435 RQRRLILPGRCAAPCL 482 RQR ++LPGRCAAP + Sbjct: 1972 RQR*ILLPGRCAAPAV 1925
>LOC_Os02g20410:12002.t01833:unspliced-genomic guanylate-binding protein, N-terminal domain containing protein,| expressed Length = 10837 Score = 31.3 bits (62), Expect = 7.0 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +3 / +2 Query: 513 NLCLAAVCFVCGGSVSMMNL 572 +L LA +C VCGGSVS+ N+ Sbjct: 10499 DLMLAELCEVCGGSVSVCNV 10558
>LOC_Os07g46820:12007.t04318:unspliced-genomic ribonucleoprotein, putative, expressed| Length = 4787 Score = 31.3 bits (62), Expect = 7.0 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = +1 / +1 Query: 121 LFVRNLPFNISSEEMYDIFGKYGAIRQIRL 210 LF+ LP ++ E+ +F +YG IRQ+++ Sbjct: 1684 LFIGMLPRDVKENEVSALFSQYGNIRQLKV 1773
>LOC_Os07g29760:12007.t02666:unspliced-genomic cysteine proteinase A494 precursor, putative, expressed| Length = 1724 Score = 31.3 bits (62), Expect = 7.0 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = -2 / -2 Query: 132 PHEQRPVHLRRQPRVPLP 79 PHE+R + LR QPR P+P Sbjct: 178 PHERRELGLREQPRRPVP 125
>LOC_Os03g16580:12003.t01441:unspliced-genomic expressed protein| Length = 5110 Score = 31.3 bits (62), Expect = 7.0 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +1 / +2 Query: 136 LPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTAYVVYEDIY 264 LP++ EE YD+ G+Y + + L + A V+ E +Y Sbjct: 4412 LPYDDDIEEAYDVLGQYDVVMKNDLASGDVDGSAAGVIDEKLY 4540
>LOC_Os03g04340:12003.t00313:unspliced-genomic 24-methylenesterol C-methyltransferase 2, putative, expressed| Length = 1875 Score = 31.3 bits (62), Expect = 7.0 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -2 / -3 Query: 189 PVLAEDVVHLLARDVERQVPHEQRPVHLRR 100 PVL V+HL+ RD H P+HLRR Sbjct: 400 PVLRVLVLHLVVRDGSHLEIHRPLPLHLRR 311
>LOC_Os07g41180:12007.t03773:unspliced-genomic RNA-binding protein-like, putative, expressed| Length = 5036 Score = 30.4 bits (60), Expect(2) = 7.4 Identities = 10/31 (32%), Positives = 23/31 (74%) Frame = +1 / +3 Query: 106 EVNRALFVRNLPFNISSEEMYDIFGKYGAIR 198 E +++V++LP+ +++++ + F K+GAIR Sbjct: 3198 EQGYSVYVKHLPYECTTKDVEEKFRKFGAIR 3290 Score = 22.6 bits (43), Expect(2) = 7.4 Identities = 7/19 (36%), Positives = 13/19 (68%) Frame = +3 / +3 Query: 555 VSMMNLIRLIAFVLCFDVT 611 VS + L+A ++CFD++ Sbjct: 3321 VSESLYVGLVALIICFDIS 3377
>LOC_Os09g12840:12009.t01074:unspliced-genomic conserved hypothetical protein| Length = 2121 Score = 24.9 bits (48), Expect(2) = 8.9 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = +3 / +3 Query: 168 RHLRQVRGHPADPAGQRQG 224 RH + GH P GQR+G Sbjct: 1815 RHAARQEGHRRAPPGQRRG 1871 Score = 23.1 bits (44), Expect(2) = 8.9 Identities = 7/9 (77%), Positives = 9/9 (100%) Frame = +3 / +3 Query: 12 QPSPQPDRN 38 QP+PQPDR+ Sbjct: 1701 QPAPQPDRH 1727
>LOC_Os09g32800:12009.t02893:unspliced-genomic proteasome subunit beta type 1, putative, expressed| Length = 3563 Score = 30.9 bits (61), Expect = 9.6 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +3 / +2 Query: 378 GGRDHQAPGEVRHRIQDPLRQRRLILPGRCAAPCL 482 GGR + ++H PL+ R + PGR AAP L Sbjct: 287 GGRRYPPFRRIQHPHARPLQDLRAVSPGRIAAPDL 391
>LOC_Os07g42970:12007.t03945:unspliced-genomic cytokinin-O-glucosyltransferase 2, putative| Length = 3867 Score = 30.9 bits (61), Expect = 9.6 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +3 / +3 Query: 156 RGDVRHLRQVRGHPADPAGQRQG 224 R D HL +RGH AD A RQG Sbjct: 174 RRDAGHLGDLRGHAADGARPRQG 242
>LOC_Os07g38540:12007.t03519:unspliced-genomic 40S ribosomal protein S13, putative, expressed| Length = 910 Score = 30.9 bits (61), Expect = 9.6 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = +3 / +1 Query: 345 QDVQEDGHQEEGGRDHQAPGEVRHRIQDPLRQRRLILPGR 464 QDV+ G ++ R + P V R P R RR PGR Sbjct: 163 QDVRVGGGGDDRARRQEGPAAVADRGDPPRRPRRPARPGR 282
>LOC_Os06g35480:12006.t03245:unspliced-genomic peroxidase 52 precursor, putative, expressed| Length = 1538 Score = 30.9 bits (61), Expect = 9.6 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +3 / +2 Query: 342 QQDVQEDGHQEEGGRDHQAPGEVRHRIQDPLRQRR 446 QQ GH GR H G VRH Q LR+R+ Sbjct: 815 QQGAVAAGHDGAVGRAHAGAGPVRHVPQPHLRRRQ 919
>LOC_Os06g07090:12006.t00593:unspliced-genomic AP-1 complex subunit gamma-1, expressed| Length = 9984 Score = 30.9 bits (61), Expect = 9.6 Identities = 10/31 (32%), Positives = 20/31 (64%) Frame = -3 / -2 Query: 233 PRVSLALPSRICRMAPYLPKMSYISSLEMLN 141 P++ ++L + IC+ +P MSY + E+L+ Sbjct: 2612 PKIRMSLSTLICKNGSVIPAMSYSGAYELLD 2520
>LOC_Os03g29250:12003.t02549:unspliced-genomic ids4-like protein, putative, expressed| Length = 1107 Score = 30.9 bits (61), Expect = 9.6 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = -3 / -1 Query: 662 WHPQHRYYYLLIEVSNSSYIKTQDKCYQSNQVHHRYRTT 546 W+ H +YLL+ + + IKT K + + H+R+ T Sbjct: 1053 WY*SHSLHYLLLLLVRETMIKTHTKKTKRERQHYRFVIT 937
>LOC_Os03g09220:12003.t00777:unspliced-genomic expressed protein| Length = 4954 Score = 30.9 bits (61), Expect = 9.6 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -3 / -3 Query: 659 HPQHRYYYLLIEVSNSSYIKTQDKCY 582 HP+H YL I+VSN + +T+ C+ Sbjct: 4001 HPRHLRTYLTIKVSNQNSGRTRGSCF 3924
>LOC_Os03g06920:12003.t00558:unspliced-genomic DRD1, putative, expressed| Length = 7317 Score = 30.9 bits (61), Expect = 9.6 Identities = 12/30 (40%), Positives = 14/30 (46%) Frame = +3 / -2 Query: 465 CAAPCLV*KSSRETVCNLCLAAVCFVCGGS 554 CAA C SS + C A+ CF C S Sbjct: 833 CAATCFACASSMACCRSRCCASTCFACASS 744
>LOC_Os01g41950:12001.t03715:unspliced-genomic expressed protein| Length = 3287 Score = 30.9 bits (61), Expect = 9.6 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -3 / -2 Query: 179 PKMSYISSLEMLNGRFRTNSALFTSGGSLAFPFLK 75 PK+ +SLE + + NS + S S+ FPF K Sbjct: 2779 PKLQPCTSLEYIGNSYTENSMVPVSSTSMCFPFWK 2675
>LOC_Os09g31430:12009.t02785:unspliced-genomic non-cyanogenic beta-glucosidase precursor, putative, expressed| Length = 3102 Score = 30.9 bits (61), Expect = 9.7 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +2 / -3 Query: 566 EPDSIDSICPVF*CNLNLILQLVSSNIYAVDAKKKKK 676 +P ++ +IC + C+ + L+L +Y V KKKK Sbjct: 841 DPSAVITICTQWLCD*HQALELTCLRLYCVSQNKKKK 731
>LOC_Os05g28520:12005.t02500:unspliced-genomic ATP binding protein, putative, expressed| Length = 2890 Score = 30.9 bits (61), Expect = 9.7 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -2 / -1 Query: 162 LLARDVERQVPHEQRPVHLRRQPRVPLPQA 73 L R +R+ P +RP+ L QPR P P A Sbjct: 1348 LQLRPPQRRHPRHERPLQLPAQPRRPRPHA 1259
>LOC_Os05g13650:12005.t01143:unspliced-genomic ribonucleoprotein, chloroplast, putative| Length = 761 Score = 30.9 bits (61), Expect = 9.7 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +1 / +1 Query: 121 LFVRNLPFNISSEEMYDIFGKYGAI 195 ++V NLPF+ + + D F YGAI Sbjct: 58 VYVGNLPFSANDRSLKDSFANYGAI 132
>LOC_Os04g03420:12004.t00232:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2002 Score = 30.9 bits (61), Expect = 9.7 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = -2 / -3 Query: 168 VHLLARDVERQVPHEQRPVHLRRQPRVPLPQ 76 VH++A ++R +P QR V LRR P + P+ Sbjct: 878 VHVIALGLKRLLPGPQRGVDLRRPPLLRTPR 786
>LOC_Os07g28820:12007.t02572:unspliced-genomic ire1 homolog-1, putative, expressed| Length = 4888 Score = 28.6 bits (56), Expect(2) = 9.8 Identities = 14/76 (18%), Positives = 30/76 (39%) Frame = -3 / -1 Query: 305 TLKPERWSTAFLAS*MSSYTTYAVPRVSLALPSRICRMAPYLPKMSYISSLEMLNGRFRT 126 TL P W+ + + + A+PR+ + C + PK+ + + + Sbjct: 1822 TLSPNAWNISSQTGRLGKHVLVAIPRIVICSEGSSCPVEQMFPKIRCTDRIISSHNHYDI 1643 Query: 125 NSALFTSGGSLAFPFL 78 ++ +S L + FL Sbjct: 1642 STCTTSSSI*LGWNFL 1595 Score = 24.0 bits (46), Expect(2) = 9.8 Identities = 8/13 (61%), Positives = 8/13 (61%) Frame = -1 / -1 Query: 43 VWFRSGWGLGWCL 5 VW SG G GW L Sbjct: 196 VWMESGSGRGWLL 158 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 191,293,188 Number of extensions: 2528946 Number of successful extensions: 13727 Number of sequences better than 10.0: 70 Length of query: 225 Length of database: 55,613,886 Length adjustment: 48 Effective length of query: 177 Effective length of database: 52,912,542 Effective search space: 9365519934 Effective search space used: 9365519934 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
