ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf61j04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os11g38920:12011.t03435:unspliced-genomic HVA22-like pro... 54 8e-13
2LOC_Os11g30500:12011.t02653:unspliced-genomic HVA22-like pro... 54 8e-07
3LOC_Os01g52780:12001.t04704:unspliced-genomic TB2/DP1, HVA22... 52 3e-06
4LOC_Os06g12220:12006.t01099:unspliced-genomic HVA22-like pro... 49 3e-06
5LOC_Os08g36440:12008.t03384:unspliced-genomic protein HVA22,... 51 5e-06
6LOC_Os07g38100:12007.t03478:unspliced-genomic receptor expre... 38 1e-05
7LOC_Os02g51290:12002.t04713:unspliced-genomic HVA22-like pro... 50 1e-05
8LOC_Os09g27730:12009.t02451:unspliced-genomic protein HVA22,... 37 0.075
9LOC_Os02g02920:12002.t00192:unspliced-genomic receptor expre... 34 0.95
10LOC_Os11g43200:12011.t03850:unspliced-genomic tropinone redu... 25 2.3
11LOC_Os11g43360:12011.t03866:unspliced-genomic tropinone redu... 25 2.4
12LOC_Os11g32430:12011.t02839:unspliced-genomic hypothetical p... 32 2.5
13LOC_Os10g27080:12010.t02115:unspliced-genomic hypothetical p... 32 3.4
14LOC_Os01g08710:12001.t00749:unspliced-genomic OsWRKY79 - Sup... 32 3.4
15LOC_Os11g40830:12011.t03624:unspliced-genomic retrotransposo... 28 4.5
16LOC_Os10g31420:12010.t02467:unspliced-genomic glycine-rich c... 31 4.6
17LOC_Os10g23160:12010.t01793:unspliced-genomic ent-kaurenoic ... 31 4.6
18LOC_Os03g47930:12003.t04156:unspliced-genomic expressed protein 31 4.6
19LOC_Os03g47920:12003.t04155:unspliced-genomic hypothetical p... 31 4.6
20LOC_Os09g32180:12009.t02834:unspliced-genomic conserved hypo... 31 4.7
21LOC_Os01g10980:12001.t00971:unspliced-genomic nodulin-like p... 27 5.2
22LOC_Os01g15890:12001.t01440:unspliced-genomic retrotransposo... 31 6.3
23LOC_Os06g36750:12006.t03370:unspliced-genomic hypothetical p... 31 6.4
24LOC_Os03g14610:12003.t01250:unspliced-genomic receptor expre... 31 6.4
25LOC_Os02g30800:12002.t02773:unspliced-genomic DNA polymerase... 31 6.4
26LOC_Os01g07212:12001.t00601:unspliced-genomic staphylococcal... 24 7.4
27LOC_Os04g45460:12004.t04080:unspliced-genomic secretory prot... 30 8.7
28LOC_Os02g43770:12002.t03961:unspliced-genomic bZIP protein, ... 30 8.7
29LOC_Os01g46250:12001.t04076:unspliced-genomic lipase-like pr... 30 8.7
30LOC_Os07g42410:12007.t03893:unspliced-genomic expressed protein 28 9.0

>LOC_Os11g38920:12011.t03435:unspliced-genomic HVA22-like protein c, putative, expressed|
          Length = 4461
 Score = 54.2 bits (112), Expect(2) = 8e-13
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +1 / +1

                                                                 
Query: 43   LITNGVGVAYPAYASFKALETPEEGDDRQWTTYWIIYGCFSMVEVFADLFVSW 201
            ++   V   Y  YAS KA+ET    DD+QW TYW++Y   ++ E+     + W
Sbjct: 1972 MVNTNVTRCYYRYASVKAIETKSPVDDQQWLTYWVMYSLITLFELTFASIIQW 2130



 Score = 42.3 bits (86), Expect(2) = 8e-13
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1 / +1

                                                  
Query: 205  PFYFPFKLIFLIALQWPGLNLAGVIYTNYLRPLLKKHE 318
            PF+   KLIF+  L  P  N A  +Y NY+RP+  KH+
Sbjct: 3010 PFWPSMKLIFICWLVLPYFNGAAFVYQNYVRPMFVKHQ 3123



to top

>LOC_Os11g30500:12011.t02653:unspliced-genomic HVA22-like protein e, putative, expressed|
          Length = 1323

 Score = 53.8 bits (111), Expect = 8e-07
 Identities = 17/41 (41%), Positives = 27/41 (65%)
 Frame = +1 / +3

                                                    
Query: 79  YASFKALETPEEGDDRQWTTYWIIYGCFSMVEVFADLFVSW 201
           YAS +A+E+P + DD QW  YWI+Y   ++VE+  +  + W
Sbjct: 453 YASVQAMESPSKLDDEQWLAYWILYSFITLVEMLLESLIYW 575



 Score = 40.9 bits (83), Expect = 0.006
 Identities = 17/34 (50%), Positives = 21/34 (61%)
 Frame = -1 / -2

                                             
Query: 180 EHLHHGEAAVDDPVGGPLAVVALLGRLQRLEGRV 79
           +HLH G+  V+DPVG PL VV L   L  L  R+
Sbjct: 554 KHLHEGDEGVEDPVGQPLLVVKLRWALHGLHRRI 453



to top

>LOC_Os01g52780:12001.t04704:unspliced-genomic TB2/DP1, HVA22 family protein, expressed|
          Length = 7151

 Score = 51.9 bits (107), Expect = 3e-06
 Identities = 16/42 (38%), Positives = 27/42 (64%)
 Frame = +1 / +1

                                                      
Query: 79   YASFKALETPEEGDDRQWTTYWIIYGCFSMVEVFADLFVSWF 204
            YAS +A+E+P   DD+QW TYW++Y   ++ E+     + W+
Sbjct: 5311 YASMRAIESPSTLDDQQWLTYWVLYSLITLFELSCWKVLQWY 5436



to top

>LOC_Os06g12220:12006.t01099:unspliced-genomic HVA22-like protein a, putative, expressed|
          Length = 3614

 Score = 48.7 bits (100), Expect(2) = 3e-06
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = +1 / +2

                                                     
Query: 79   YASFKALETPEEGDDRQWTTYWIIYGCFSMVEVFADLFVSW 201
            YAS +A+ET    DD+QW TYW++Y   ++ E+     + W
Sbjct: 1784 YASVRAIETKSPVDDQQWLTYWVLYSFITLFELTFAPVIEW 1906



 Score = 24.9 bits (48), Expect(2) = 3e-06
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1 / +3

                                             
Query: 205  PFYFPFKLIFLIALQWPGLNLAGVIYTNYLRPL 303
            PF+   KL F   L  P  + A  +Y +++RP+
Sbjct: 2211 PFWSYAKLFFNCWLVLPCFHGAAYVYDHFVRPM 2309



to top

>LOC_Os08g36440:12008.t03384:unspliced-genomic protein HVA22, putative, expressed|
          Length = 1361

 Score = 51.0 bits (105), Expect = 5e-06
 Identities = 17/41 (41%), Positives = 27/41 (65%)
 Frame = +1 / +1

                                                    
Query: 79  YASFKALETPEEGDDRQWTTYWIIYGCFSMVEVFADLFVSW 201
           YAS  A+E+P + DD QW  YWI+Y   +++E+ A+  + W
Sbjct: 460 YASICAMESPTKVDDEQWLAYWILYSFITLLEMVAEPVLYW 582



 Score = 46.0 bits (94), Expect = 2e-04
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = -1 / -3

                                                
Query: 189 QVGEHLHHGEAAVDDPVGGPLAVVALLGRLQRLEGRV 79
           ++G+HL  G+  V+DPVG PL VV L   L R +GRV
Sbjct: 570 RLGDHLQEGDEGVEDPVGQPLLVVNLGRALHRADGRV 460



to top

>LOC_Os07g38100:12007.t03478:unspliced-genomic receptor expression-enhancing protein 6, putative, expressed|
          Length = 4747

 Score = 38.2 bits (77), Expect(3) = 1e-05
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +1 / +1

                                                
Query: 37   SALITNGVGVAYPAYASFKALETPEEGDDRQWTTYW 144
            S   +  +GV  P Y++F+A+E  ++ +  +W  YW
Sbjct: 1582 SCFCSCAIGVGLPVYSTFRAIEKKDQKEKERWLLYW 1689



 Score = 29.9 bits (59), Expect(3) = 1e-05
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1 / +3

                               
Query: 277  IYTNYLRPLLKKHEAEIDQ 333
            +Y  Y+RP   KH+A+ID+
Sbjct: 3678 VYRRYMRPFFLKHQAKIDR 3734



 Score = 23.5 bits (45), Expect(3) = 1e-05
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1 / +2

                             
Query: 205  PFYFPFKLIFLIALQWP 255
            PFY+  K   L+ LQ+P
Sbjct: 2891 PFYYHVKFAILVWLQFP 2941



to top

>LOC_Os02g51290:12002.t04713:unspliced-genomic HVA22-like protein a, putative, expressed|
          Length = 2441

 Score = 50.1 bits (103), Expect = 1e-05
 Identities = 17/45 (37%), Positives = 27/45 (60%)
 Frame = +1 / +1

                                                         
Query: 79   YASFKALETPEEGDDRQWTTYWIIYGCFSMVEVFADLFVSWFPFY 213
            YAS +A+ET    DD+QW TYW++Y   ++ E+     + W  F+
Sbjct: 1204 YASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFSPVLEW*RFF 1338



to top

>LOC_Os09g27730:12009.t02451:unspliced-genomic protein HVA22, putative, expressed|
          Length = 799

 Score = 37.3 bits (75), Expect = 0.075
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1 / +1

                                              
Query: 97  LETPEEGDDRQWTTYWIIYGCFSMVEVFADLFVSW 201
           +E+  + DD QW  YWI+Y   +++E+     + W
Sbjct: 1   MESTSKVDDEQWLVYWILYSLITLMEMALHKVLYW 105



to top

>LOC_Os02g02920:12002.t00192:unspliced-genomic receptor expression-enhancing protein 3, putative, expressed|
          Length = 4657

 Score = 33.6 bits (67), Expect = 0.95
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +1 / +2

                                 
Query: 277  IYTNYLRPLLKKHEAEIDQNI 339
            +Y ++ +P + KHEAEID+N+
Sbjct: 1490 VYESFFKPYIGKHEAEIDRNL 1552



to top

>LOC_Os11g43200:12011.t03850:unspliced-genomic tropinone reductase 2, putative|
          Length = 1575

 Score = 25.5 bits (50), Expect(2) = 2.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3 / +1

                         
Query: 315 RGRNRPEHLPGGPG 356
           R + RP+H+PGG G
Sbjct: 370 RQQRRPDHVPGGGG 411



 Score = 24.0 bits (46), Expect(2) = 2.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2 / +1

                             
Query: 437 RVLAPPRPSKRLAPKKKK 490
           RVL PP P++  AP +++
Sbjct: 454 RVLLPPLPARAPAPARRR 507



to top

>LOC_Os11g43360:12011.t03866:unspliced-genomic tropinone reductase 2, putative|
          Length = 1292

 Score = 25.5 bits (50), Expect(2) = 2.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3 / +1

                         
Query: 315 RGRNRPEHLPGGPG 356
           R + RP+H+PGG G
Sbjct: 376 RQQRRPDHVPGGGG 417



 Score = 24.0 bits (46), Expect(2) = 2.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2 / +1

                             
Query: 437 RVLAPPRPSKRLAPKKKK 490
           RVL PP P++  AP +++
Sbjct: 460 RVLLPPLPARAPAPARRR 513



to top

>LOC_Os11g32430:12011.t02839:unspliced-genomic hypothetical protein|
          Length = 1811

 Score = 32.2 bits (64), Expect = 2.5
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1 / -2

                                                   
Query: 183 GEHLHHGEAAVDDPVGGPLAVVALLGRLQRLEGRVRGVGH 64
           GEH   G  AV+DP+   L +V +LG ++RL   V    H
Sbjct: 298 GEHGGGGSDAVEDPLELELPLVEVLGHVRRLAELVHADDH 179



to top

>LOC_Os10g27080:12010.t02115:unspliced-genomic hypothetical protein|
          Length = 1118

 Score = 31.8 bits (63), Expect = 3.4
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1 / -1

                                     
Query: 187  LFVSWFPFYFPFKLIFLIALQWPGL 261
            L  SW   Y+P   IFL  +QWP L
Sbjct: 1118 LHSSWIVLYYPLGHIFLNRIQWPTL 1044



to top

>LOC_Os01g08710:12001.t00749:unspliced-genomic OsWRKY79 - Superfamily of rice TFs having WRKY and zinc finger|
            domains, expressed
          Length = 15620

 Score = 31.8 bits (63), Expect = 3.4
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +1 / +2

                                                   
Query: 142  WIIYGCFSMVEVFADLFVSWFPFYFPFKLIFLIALQWPG 258
            W ++ C  +  ++   FVSW  F     ++++I   +PG
Sbjct: 5621 WFLHQCIFLAHIYLYSFVSWNNFGIDCLILYIICNYFPG 5737



to top

>LOC_Os11g40830:12011.t03624:unspliced-genomic retrotransposon protein, putative, unclassified, expressed|
          Length = 3367

 Score = 27.6 bits (54), Expect(2) = 4.5
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3 / +1

                                    
Query: 355  PGPPGRCSGRFRPRASSGVGGDSW 284
            PG PGR  G FR  +  G G  +W
Sbjct: 1591 PGSPGRGDGDFRGSSRRGRGRVAW 1662



 Score = 24.4 bits (47), Expect(2) = 4.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1 / +1

                               
Query: 186  VGEHLHHGEAAVDDPVGGP 130
            +G   HHG   V  P GGP
Sbjct: 1897 LGRRQHHGVGRVKCPGGGP 1953



to top

>LOC_Os10g31420:12010.t02467:unspliced-genomic glycine-rich cell wall structural protein 2 precursor, putative,|
           expressed
          Length = 934

 Score = 31.3 bits (62), Expect = 4.6
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2 / +3

                          
Query: 368 LSLRAWPAWEMFWSI 324
           L LR WP+W ++WSI
Sbjct: 189 LWLRVWPSWRLWWSI 233



to top

>LOC_Os10g23160:12010.t01793:unspliced-genomic ent-kaurenoic acid oxidase 1, putative|
          Length = 1257

 Score = 31.3 bits (62), Expect = 4.6
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -3 / +2

                             
Query: 349 PPGRCSGRFRPRASSGVG 296
           P G CSGR RP AS+ VG
Sbjct: 380 PTGSCSGRRRPAASASVG 433



to top

>LOC_Os03g47930:12003.t04156:unspliced-genomic expressed protein|
          Length = 12532

 Score = 31.3 bits (62), Expect = 4.6
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3 / -1

                                   
Query: 364 P*EPGPPGRCSGRFRPRASSGVGG 293
           P  P PP +  GR R RA+ G+GG
Sbjct: 331 PPPPPPPSKAGGRGRGRAARGLGG 260



to top

>LOC_Os03g47920:12003.t04155:unspliced-genomic hypothetical protein|
          Length = 3677

 Score = 31.3 bits (62), Expect = 4.6
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3 / +2

                                   
Query: 364 P*EPGPPGRCSGRFRPRASSGVGG 293
           P  P PP +  GR R RA+ G+GG
Sbjct: 245 PPPPPPPSKAGGRGRGRAARGLGG 316



to top

>LOC_Os09g32180:12009.t02834:unspliced-genomic conserved hypothetical protein|
          Length = 8139

 Score = 31.3 bits (62), Expect = 4.7
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1 / +2

                                            
Query: 145  IIYGCFSMVEVFADLFVSWFPFYFPFKLIFLI 240
            I+Y CF +  VF   ++S F FY+    I L+
Sbjct: 6854 ILYSCF*LTSVFICCWISLFNFYYEVTFISLL 6949



to top

>LOC_Os01g10980:12001.t00971:unspliced-genomic nodulin-like protein, putative|
          Length = 1454

 Score = 27.2 bits (53), Expect(2) = 5.2
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -2 / +1

                                           
Query: 359 RAWPAWEMFWSISASCFFRSGRR*LV*MTPAR 264
           R WPAW   W+         GRR*  * T AR
Sbjct: 718 RRWPAWCCAWAACWRSRCTPGRR*AP*TTIAR 813



 Score = 23.5 bits (45), Expect(2) = 5.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1 / +2

                            
Query: 102  LQRLEGRVRGVGHAHA 55
            LQR  G+ +G  HAHA
Sbjct: 1283 LQRAVGQEQGARHAHA 1330



to top

>LOC_Os01g15890:12001.t01440:unspliced-genomic retrotransposon protein, putative, unclassified, expressed|
          Length = 4530

 Score = 30.9 bits (61), Expect = 6.3
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2 / -2

                               
Query: 482  FLERGVYLALAAPGPSRGR 426
            FL+RG++L L  PG  RGR
Sbjct: 1781 FLDRGLFLGLTLPGVGRGR 1725



to top

>LOC_Os06g36750:12006.t03370:unspliced-genomic hypothetical protein|
          Length = 495

 Score = 30.9 bits (61), Expect = 6.4
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = -1 / +3

                                                  
Query: 171 HHGEAAVDDPVGGPLAVVALLGRLQRLEGRVRGVGHAHA 55
           HHG+   DD  GG      LL R +R +GR    G  HA
Sbjct: 165 HHGDNDHDDDEGGAARKQQLLRRPRRRQGRRPADGGHHA 281



to top

>LOC_Os03g14610:12003.t01250:unspliced-genomic receptor expression-enhancing protein 3, putative, expressed|
          Length = 4997

 Score = 30.9 bits (61), Expect = 6.4
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1 / +3

                                 
Query: 277  IYTNYLRPLLKKHEAEIDQNI 339
            IY  + RP + +HE EID+N+
Sbjct: 1788 IYGTFFRPYISQHENEIDRNL 1850



to top

>LOC_Os02g30800:12002.t02773:unspliced-genomic DNA polymerase family B, exonuclease domain containing protein,|
            expressed
          Length = 22072

 Score = 30.9 bits (61), Expect = 6.4
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +1 / -2

                                           
Query: 103  TPEEGDDRQWTTYWIIYGCFSMVEVFADLFV 195
            T E G  ++WT YW++   F  + +F+  ++
Sbjct: 4749 TSEVGAKKKWTAYWLLLPPFHNIRLFSIAYI 4657



to top

>LOC_Os01g07212:12001.t00601:unspliced-genomic staphylococcal nuclease homologue family protein, expressed|
          Length = 6406

 Score = 24.0 bits (46), Expect(2) = 7.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2 / -1

                           
Query: 359 RAWPAWEMFWSISASC 312
           RA  AWE +W  S  C
Sbjct: 142 RAGSAWERYWWASFEC 95



 Score = 23.5 bits (45), Expect(2) = 7.4
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -3 / -3

                   
Query: 460 WPWRRQDP 437
           WPWRR+ P
Sbjct: 290 WPWRRRRP 267



to top

>LOC_Os04g45460:12004.t04080:unspliced-genomic secretory protein-like, putative, expressed|
          Length = 3742

 Score = 30.4 bits (60), Expect = 8.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3 / +2

                            
Query: 358 EPGPPGRCSGRFRPRAS 308
           +P  PGRC  RF+P AS
Sbjct: 74  DPAKPGRCVARFKPAAS 124



to top

>LOC_Os02g43770:12002.t03961:unspliced-genomic bZIP protein, putative, expressed|
          Length = 2335

 Score = 30.4 bits (60), Expect = 8.7
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3 / +2

                            
Query: 355  PGPPGRCSGRFRPRAS 308
            PGPPG+   R RPRA+
Sbjct: 1490 PGPPGQAPARLRPRAA 1537



to top

>LOC_Os01g46250:12001.t04076:unspliced-genomic lipase-like protein, putative, expressed|
          Length = 2872

 Score = 30.4 bits (60), Expect = 8.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3 / +2

                               
Query: 343 GRCSGRFRPRASSGVGGDSW 284
           GRC+GR  PR+++G G   W
Sbjct: 284 GRCAGRDAPRSATGWGTSPW 343



to top

>LOC_Os07g42410:12007.t03893:unspliced-genomic expressed protein|
          Length = 7850

 Score = 27.6 bits (54), Expect(2) = 9.0
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2 / -1

                                               
Query: 209  KGNHETNRSANTSTMEKQP*MIQ*VVHWRSSPSSG 105
            K  H+TNR+   +  +KQ   I  V+H  S  +SG
Sbjct: 1085 KNRHKTNRTRLKTPFDKQKNTINIVMHTSSISASG 981



 Score = 24.4 bits (47), Expect(2) = 9.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2 / -1

                              
Query: 128 WRSSPSSGVSSALKDAYAG 72
           W+S+ SSG S ++  A AG
Sbjct: 368 WKSAKSSGASGSIAAAAAG 312


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 125,819,892
Number of extensions: 1690527
Number of successful extensions: 9848
Number of sequences better than 10.0: 30
Length of query: 164
Length of database: 55,613,886
Length adjustment: 47
Effective length of query: 117
Effective length of database: 52,968,820
Effective search space: 6197351940
Effective search space used: 6197351940
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
to top