| Clone Name | FLbaf63o23 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os07g28460:12007.t02537:unspliced-genomic transposon protein, putative, unclassified, expressed| Length = 6870 Score = 33.6 bits (67), Expect = 1.3 Identities = 7/17 (41%), Positives = 13/17 (76%) Frame = -2 / -3 Query: 394 CTCCDILSLEWFWIVLH 344 CTCC ++++ W W ++H Sbjct: 1981 CTCCPVVTIHWKWYLIH 1931
>LOC_Os01g26788:12001.t02363:unspliced-genomic wall-associated kinase 1, putative| Length = 2705 Score = 33.1 bits (66), Expect = 1.8 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = -2 / +1 Query: 565 CSSGTDFKTREMLCYPLQAHDHDHGSVLWIVH 470 C GT F E C P Q H+ H V+ I+H Sbjct: 544 CPYGTYFDPVETKCIPTQPHERRHNIVMGILH 639
>LOC_Os10g37280:12010.t02995:unspliced-genomic sphingosine kinase, putative, expressed| Length = 8669 Score = 32.7 bits (65), Expect = 2.5 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -2 / +3 Query: 532 MLCYPLQAHDHDHGSVLWIVHV 467 MLCYP A H GS+ +VH+ Sbjct: 3843 MLCYPFVARSHFEGSLALVVHI 3908
>LOC_Os07g38400:12007.t03505:unspliced-genomic SV2 related protein, putative, expressed| Length = 3978 Score = 31.8 bits (63), Expect = 4.7 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = -2 / +3 Query: 409 CLWGTCTCCDILSL 368 C WG+C CC +LSL Sbjct: 2628 CHWGSCFCCPVLSL 2669
>LOC_Os09g11240:12009.t00914:unspliced-genomic expressed protein| Length = 2798 Score = 31.3 bits (62), Expect = 6.5 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +3 / -3 Query: 75 QHRVELVAGVAATSSPPRSCASKRTQEGFH 164 +HR LVA AAT++P R+ +R E H Sbjct: 414 RHRCRLVAVAAATATPGRAAVHRRPPEQHH 325
>LOC_Os02g02480:12002.t00147:unspliced-genomic DNA binding protein, putative, expressed| Length = 3378 Score = 28.6 bits (56), Expect(2) = 8.3 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = -3 / +1 Query: 549 TSKQGKCYATRCRPTITTTAQSSG 478 +S C +RC P+I TT SSG Sbjct: 2113 SSPSSSCIPSRCIPSIYTTLSSSG 2184 Score = 23.5 bits (45), Expect(2) = 8.3 Identities = 7/16 (43%), Positives = 11/16 (68%) Frame = -2 / +1 Query: 400 GTCTCCDILSLEWFWI 353 G+C C IL+L W ++ Sbjct: 2542 GSCDCAIILALAWQYL 2589
>LOC_Os08g02354:12008.t00130:unspliced-genomic expressed protein| Length = 10398 Score = 30.9 bits (61), Expect = 9.0 Identities = 10/30 (33%), Positives = 20/30 (66%) Frame = -2 / +3 Query: 517 LQAHDHDHGSVLWIVHVKAICLLVVLPRQL 428 L+A GSV WI++++ I + ++LP ++ Sbjct: 2862 LRAKASSSGSVQWIIYIQFILIFIILPLKI 2951 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 160,332,530 Number of extensions: 2000594 Number of successful extensions: 9996 Number of sequences better than 10.0: 7 Length of query: 212 Length of database: 55,613,886 Length adjustment: 48 Effective length of query: 164 Effective length of database: 52,912,542 Effective search space: 8677656888 Effective search space used: 8677656888 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)