| Clone Name | FLbaf69g24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001049549.1| Oryza sativa (japonica cultivar-group) Os01g0358300 (Os01g0358300) mRNA, complete cds Length = 1681 Score = 1239 bits (625), Expect = 0.0 Identities = 1042/1181 (88%) Strand = Plus / Plus Query: 253 ccgtctccccctccttcgccggagaaggcggtcgaggcggctccgacggcggagtcgtgc 312 ||||||||||| || ||||||| ||||| || | ||| | |||||||||||||||||| Sbjct: 205 ccgtctcccccgccatcgccggggaaggaggcggtggctgtcccgacggcggagtcgtgc 264 Query: 313 gtcaacctcggcctcgagttcttctccaagggcagggtgaaggacgcacttgaacaattt 372 |||||||| || |||||| ||||||||||||||||||||||||| || |||||||||||| Sbjct: 265 gtcaacctgggactcgagctcttctccaagggcagggtgaaggatgctcttgaacaattt 324 Query: 373 gacaaggccctagagctgaatccaaatcctaccgaagcccaagcagcgttctataacaag 432 || || |||||||||||||||||||||||| |||||||||||||| | || || || Sbjct: 325 gagaatgccctagagctgaatccaaatcctgttgaagcccaagcagcactatacaataaa 384 Query: 433 gcatgctgccatgcatacagggaagaaagcaaaaaagctgcagattgcttgagaatagct 492 |||||||||||||||| |||||||||||||| ||||||||||||||||| || | |||| Sbjct: 385 gcatgctgccatgcatttagggaagaaagcaacaaagctgcagattgcttaaggacagct 444 Query: 493 ttgcgagattacaatctcaaatttggcacagtacttaatgatccagacatggcgccattc 552 |||||||||| |||||||| ||||| || ||||||||||||| ||| |||| || ||| Sbjct: 445 ctgcgagattataatctcaagtttggtactatacttaatgatcctgacttggcaccgttc 504 Query: 553 agggcatcaccagaatttaaggaacttcaagaggaggcattgcgtggtggagaagatatt 612 ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 505 agggcatcaccggaattcaaggaacttcaagaagaggcattgcgtggtggagaagatatt 564 Query: 613 ggttctggattccgaagagatctaaagcttattagtgaagtacaagcaccatttcgtggt 672 |||||||| ||||||||||| || || || |||||||||||||||||||||||||||||| Sbjct: 565 ggttctgggttccgaagagacctgaaactcattagtgaagtacaagcaccatttcgtggt 624 Query: 673 gtccggaggttcttttatgtggcgttcattgcagcggctggaatttcaacattctttacc 732 ||||| |||||||||||||||||||| | |||||| |||||||||||||||||||||||| Sbjct: 625 gtccgaaggttcttttatgtggcgttaactgcagcagctggaatttcaacattctttacc 684 Query: 733 attcccagacttatacttgcacttcaaggtggtgatggtgctccagattttctggaaacg 792 ||||| ||||||||||||||| |||||||||| |||||||| || ||| | |||||||| Sbjct: 685 attcctagacttatacttgcagttcaaggtggcgatggtgcccctgatctgctggaaact 744 Query: 793 gctgggaatgctgccattaatattggaggtattgttgtgctcgtggctttatttgtctgg 852 | ||||||||||||||| |||||||||||||||||||||||||||||||| | | ||||| Sbjct: 745 gttgggaatgctgccatcaatattggaggtattgttgtgctcgtggctttgtatttctgg 804 Query: 853 gaaaacaagaaagaagaagagcagattacaaatatctctcgtaatgaaaccctttcaagg 912 ||||||||||||||||| ||||||| ||| | || ||||| |||||||||||||||||| Sbjct: 805 gaaaacaagaaagaagagcagcagatcacacaaatttctcgcaatgaaaccctttcaagg 864 Query: 913 ttacctgtgcgtctgtcaaccaatcgcataactgaacttgtgcaactccgggacattact 972 |||||||| || ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 865 ttacctgtccgcctgtcaaccaatcgcattattgagcttgtgcaactccgggacattact 924 Query: 973 aggccagttatattggcaggttcaaaagcatctgttactcaagcaatgcaaagagctgag 1032 |||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 925 aggccagttatactggcaggttcaaaagcatccattactcgagcaatgcaaagagctgag 984 Query: 1033 aggtaccgaactgaactgctcaaacgaggcgttcttctaattcctgtgatctttggtgct 1092 || || || ||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 985 agatatcggactgaactgctgaaacgaggtgttcttctaattcctgtgatctttggtgct 1044 Query: 1093 tcacaaaaagtccaaggcaaaccaaaaggcttcggtactacaagatctgctgcatcagct 1152 || || |||| |||| | || |||| |||||| || | | |||||||||||||||||||| Sbjct: 1045 tctcagaaagcccaaagtaagccaagaggctttggaagttcaagatctgctgcatcagct 1104 Query: 1153 ccttcaattgggggcgactttgaaaaacgtactgaatctattgcggcaaaatcacgactc 1212 |||||| |||||| |||||||| || ||||||||||||||||| || |||||||| | Sbjct: 1105 ccttcagttggggatgactttgagaagcgtactgaatctattgcagcgaaatcacggtta 1164 Query: 1213 agagccgaggttcgatttaaagccgatattgtctctccagaacaatgggaaagttggata 1272 | ||| || | |||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 1165 aaagctgaagagcgatttaaggctgatattgtctctcctgaacaatgggaaagttggata 1224 Query: 1273 cgtgatcagcaagaatcggaaggtgtcactcctggtgaagatgtctacataattctccgt 1332 ||||| |||||||| || |||||||||||||| |||||||||||||| ||||| ||||| Sbjct: 1225 cgtgaccagcaagagtctgaaggtgtcactcccggtgaagatgtctatataatcctccga 1284 Query: 1333 cttgatggtcgtgtgagaagatccggaagaggcatgccaaactggaatgatattttgaag 1392 | ||||||||||| |||||||| ||||||||||||||||| ||||| || || ||| || Sbjct: 1285 ttggatggtcgtgtcagaagatctggaagaggcatgccaaattggaacgacatattgcag 1344 Query: 1393 gaattgccacgtcttgaagatttgctcagcaaacttgaacg 1433 ||| | ||||| |||||||| |||| |||||||||||||| Sbjct: 1345 gaacttccacgacttgaagaactgctgagcaaacttgaacg 1385
>dbj|AK072081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116G03, full insert sequence Length = 1683 Score = 1239 bits (625), Expect = 0.0 Identities = 1042/1181 (88%) Strand = Plus / Plus Query: 253 ccgtctccccctccttcgccggagaaggcggtcgaggcggctccgacggcggagtcgtgc 312 ||||||||||| || ||||||| ||||| || | ||| | |||||||||||||||||| Sbjct: 207 ccgtctcccccgccatcgccggggaaggaggcggtggctgtcccgacggcggagtcgtgc 266 Query: 313 gtcaacctcggcctcgagttcttctccaagggcagggtgaaggacgcacttgaacaattt 372 |||||||| || |||||| ||||||||||||||||||||||||| || |||||||||||| Sbjct: 267 gtcaacctgggactcgagctcttctccaagggcagggtgaaggatgctcttgaacaattt 326 Query: 373 gacaaggccctagagctgaatccaaatcctaccgaagcccaagcagcgttctataacaag 432 || || |||||||||||||||||||||||| |||||||||||||| | || || || Sbjct: 327 gagaatgccctagagctgaatccaaatcctgttgaagcccaagcagcactatacaataaa 386 Query: 433 gcatgctgccatgcatacagggaagaaagcaaaaaagctgcagattgcttgagaatagct 492 |||||||||||||||| |||||||||||||| ||||||||||||||||| || | |||| Sbjct: 387 gcatgctgccatgcatttagggaagaaagcaacaaagctgcagattgcttaaggacagct 446 Query: 493 ttgcgagattacaatctcaaatttggcacagtacttaatgatccagacatggcgccattc 552 |||||||||| |||||||| ||||| || ||||||||||||| ||| |||| || ||| Sbjct: 447 ctgcgagattataatctcaagtttggtactatacttaatgatcctgacttggcaccgttc 506 Query: 553 agggcatcaccagaatttaaggaacttcaagaggaggcattgcgtggtggagaagatatt 612 ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 507 agggcatcaccggaattcaaggaacttcaagaagaggcattgcgtggtggagaagatatt 566 Query: 613 ggttctggattccgaagagatctaaagcttattagtgaagtacaagcaccatttcgtggt 672 |||||||| ||||||||||| || || || |||||||||||||||||||||||||||||| Sbjct: 567 ggttctgggttccgaagagacctgaaactcattagtgaagtacaagcaccatttcgtggt 626 Query: 673 gtccggaggttcttttatgtggcgttcattgcagcggctggaatttcaacattctttacc 732 ||||| |||||||||||||||||||| | |||||| |||||||||||||||||||||||| Sbjct: 627 gtccgaaggttcttttatgtggcgttaactgcagcagctggaatttcaacattctttacc 686 Query: 733 attcccagacttatacttgcacttcaaggtggtgatggtgctccagattttctggaaacg 792 ||||| ||||||||||||||| |||||||||| |||||||| || ||| | |||||||| Sbjct: 687 attcctagacttatacttgcagttcaaggtggcgatggtgcccctgatctgctggaaact 746 Query: 793 gctgggaatgctgccattaatattggaggtattgttgtgctcgtggctttatttgtctgg 852 | ||||||||||||||| |||||||||||||||||||||||||||||||| | | ||||| Sbjct: 747 gttgggaatgctgccatcaatattggaggtattgttgtgctcgtggctttgtatttctgg 806 Query: 853 gaaaacaagaaagaagaagagcagattacaaatatctctcgtaatgaaaccctttcaagg 912 ||||||||||||||||| ||||||| ||| | || ||||| |||||||||||||||||| Sbjct: 807 gaaaacaagaaagaagagcagcagatcacacaaatttctcgcaatgaaaccctttcaagg 866 Query: 913 ttacctgtgcgtctgtcaaccaatcgcataactgaacttgtgcaactccgggacattact 972 |||||||| || ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 867 ttacctgtccgcctgtcaaccaatcgcattattgagcttgtgcaactccgggacattact 926 Query: 973 aggccagttatattggcaggttcaaaagcatctgttactcaagcaatgcaaagagctgag 1032 |||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 927 aggccagttatactggcaggttcaaaagcatccattactcgagcaatgcaaagagctgag 986 Query: 1033 aggtaccgaactgaactgctcaaacgaggcgttcttctaattcctgtgatctttggtgct 1092 || || || ||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 987 agatatcggactgaactgctgaaacgaggtgttcttctaattcctgtgatctttggtgct 1046 Query: 1093 tcacaaaaagtccaaggcaaaccaaaaggcttcggtactacaagatctgctgcatcagct 1152 || || |||| |||| | || |||| |||||| || | | |||||||||||||||||||| Sbjct: 1047 tctcagaaagcccaaagtaagccaagaggctttggaagttcaagatctgctgcatcagct 1106 Query: 1153 ccttcaattgggggcgactttgaaaaacgtactgaatctattgcggcaaaatcacgactc 1212 |||||| |||||| |||||||| || ||||||||||||||||| || |||||||| | Sbjct: 1107 ccttcagttggggatgactttgagaagcgtactgaatctattgcagcgaaatcacggtta 1166 Query: 1213 agagccgaggttcgatttaaagccgatattgtctctccagaacaatgggaaagttggata 1272 | ||| || | |||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 1167 aaagctgaagagcgatttaaggctgatattgtctctcctgaacaatgggaaagttggata 1226 Query: 1273 cgtgatcagcaagaatcggaaggtgtcactcctggtgaagatgtctacataattctccgt 1332 ||||| |||||||| || |||||||||||||| |||||||||||||| ||||| ||||| Sbjct: 1227 cgtgaccagcaagagtctgaaggtgtcactcccggtgaagatgtctatataatcctccga 1286 Query: 1333 cttgatggtcgtgtgagaagatccggaagaggcatgccaaactggaatgatattttgaag 1392 | ||||||||||| |||||||| ||||||||||||||||| ||||| || || ||| || Sbjct: 1287 ttggatggtcgtgtcagaagatctggaagaggcatgccaaattggaacgacatattgcag 1346 Query: 1393 gaattgccacgtcttgaagatttgctcagcaaacttgaacg 1433 ||| | ||||| |||||||| |||| |||||||||||||| Sbjct: 1347 gaacttccacgacttgaagaactgctgagcaaacttgaacg 1387
>dbj|AK060388.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-G10, full insert sequence Length = 1542 Score = 1239 bits (625), Expect = 0.0 Identities = 1042/1181 (88%) Strand = Plus / Plus Query: 253 ccgtctccccctccttcgccggagaaggcggtcgaggcggctccgacggcggagtcgtgc 312 ||||||||||| || ||||||| ||||| || | ||| | |||||||||||||||||| Sbjct: 209 ccgtctcccccgccatcgccggggaaggaggcggtggctgtcccgacggcggagtcgtgc 268 Query: 313 gtcaacctcggcctcgagttcttctccaagggcagggtgaaggacgcacttgaacaattt 372 |||||||| || |||||| ||||||||||||||||||||||||| || |||||||||||| Sbjct: 269 gtcaacctgggactcgagctcttctccaagggcagggtgaaggatgctcttgaacaattt 328 Query: 373 gacaaggccctagagctgaatccaaatcctaccgaagcccaagcagcgttctataacaag 432 || || |||||||||||||||||||||||| |||||||||||||| | || || || Sbjct: 329 gagaatgccctagagctgaatccaaatcctgttgaagcccaagcagcactatacaataaa 388 Query: 433 gcatgctgccatgcatacagggaagaaagcaaaaaagctgcagattgcttgagaatagct 492 |||||||||||||||| |||||||||||||| ||||||||||||||||| || | |||| Sbjct: 389 gcatgctgccatgcatttagggaagaaagcaacaaagctgcagattgcttaaggacagct 448 Query: 493 ttgcgagattacaatctcaaatttggcacagtacttaatgatccagacatggcgccattc 552 |||||||||| |||||||| ||||| || ||||||||||||| ||| |||| || ||| Sbjct: 449 ctgcgagattataatctcaagtttggtactatacttaatgatcctgacttggcaccgttc 508 Query: 553 agggcatcaccagaatttaaggaacttcaagaggaggcattgcgtggtggagaagatatt 612 ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 509 agggcatcaccggaattcaaggaacttcaagaagaggcattgcgtggtggagaagatatt 568 Query: 613 ggttctggattccgaagagatctaaagcttattagtgaagtacaagcaccatttcgtggt 672 |||||||| ||||||||||| || || || |||||||||||||||||||||||||||||| Sbjct: 569 ggttctgggttccgaagagacctgaaactcattagtgaagtacaagcaccatttcgtggt 628 Query: 673 gtccggaggttcttttatgtggcgttcattgcagcggctggaatttcaacattctttacc 732 ||||| |||||||||||||||||||| | |||||| |||||||||||||||||||||||| Sbjct: 629 gtccgaaggttcttttatgtggcgttaactgcagcagctggaatttcaacattctttacc 688 Query: 733 attcccagacttatacttgcacttcaaggtggtgatggtgctccagattttctggaaacg 792 ||||| ||||||||||||||| |||||||||| |||||||| || ||| | |||||||| Sbjct: 689 attcctagacttatacttgcagttcaaggtggcgatggtgcccctgatctgctggaaact 748 Query: 793 gctgggaatgctgccattaatattggaggtattgttgtgctcgtggctttatttgtctgg 852 | ||||||||||||||| |||||||||||||||||||||||||||||||| | | ||||| Sbjct: 749 gttgggaatgctgccatcaatattggaggtattgttgtgctcgtggctttgtatttctgg 808 Query: 853 gaaaacaagaaagaagaagagcagattacaaatatctctcgtaatgaaaccctttcaagg 912 ||||||||||||||||| ||||||| ||| | || ||||| |||||||||||||||||| Sbjct: 809 gaaaacaagaaagaagagcagcagatcacacaaatttctcgcaatgaaaccctttcaagg 868 Query: 913 ttacctgtgcgtctgtcaaccaatcgcataactgaacttgtgcaactccgggacattact 972 |||||||| || ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 869 ttacctgtccgcctgtcaaccaatcgcattattgagcttgtgcaactccgggacattact 928 Query: 973 aggccagttatattggcaggttcaaaagcatctgttactcaagcaatgcaaagagctgag 1032 |||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 929 aggccagttatactggcaggttcaaaagcatccattactcgagcaatgcaaagagctgag 988 Query: 1033 aggtaccgaactgaactgctcaaacgaggcgttcttctaattcctgtgatctttggtgct 1092 || || || ||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 989 agatatcggactgaactgctgaaacgaggtgttcttctaattcctgtgatctttggtgct 1048 Query: 1093 tcacaaaaagtccaaggcaaaccaaaaggcttcggtactacaagatctgctgcatcagct 1152 || || |||| |||| | || |||| |||||| || | | |||||||||||||||||||| Sbjct: 1049 tctcagaaagcccaaagtaagccaagaggctttggaagttcaagatctgctgcatcagct 1108 Query: 1153 ccttcaattgggggcgactttgaaaaacgtactgaatctattgcggcaaaatcacgactc 1212 |||||| |||||| |||||||| || ||||||||||||||||| || |||||||| | Sbjct: 1109 ccttcagttggggatgactttgagaagcgtactgaatctattgcagcgaaatcacggtta 1168 Query: 1213 agagccgaggttcgatttaaagccgatattgtctctccagaacaatgggaaagttggata 1272 | ||| || | |||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 1169 aaagctgaagagcgatttaaggctgatattgtctctcctgaacaatgggaaagttggata 1228 Query: 1273 cgtgatcagcaagaatcggaaggtgtcactcctggtgaagatgtctacataattctccgt 1332 ||||| |||||||| || |||||||||||||| |||||||||||||| ||||| ||||| Sbjct: 1229 cgtgaccagcaagagtctgaaggtgtcactcccggtgaagatgtctatataatcctccga 1288 Query: 1333 cttgatggtcgtgtgagaagatccggaagaggcatgccaaactggaatgatattttgaag 1392 | ||||||||||| |||||||| ||||||||||||||||| ||||| || || ||| || Sbjct: 1289 ttggatggtcgtgtcagaagatctggaagaggcatgccaaattggaacgacatattgcag 1348 Query: 1393 gaattgccacgtcttgaagatttgctcagcaaacttgaacg 1433 ||| | ||||| |||||||| |||| |||||||||||||| Sbjct: 1349 gaacttccacgacttgaagaactgctgagcaaacttgaacg 1389
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 319 bits (161), Expect = 2e-83 Identities = 218/237 (91%) Strand = Plus / Minus Query: 587 aggcattgcgtggtggagaagatattggttctggattccgaagagatctaaagcttatta 646 |||||||||||||||||||||||||||||||||| ||||||||||| || || || |||| Sbjct: 14493237 aggcattgcgtggtggagaagatattggttctgggttccgaagagacctgaaactcatta 14493178 Query: 647 gtgaagtacaagcaccatttcgtggtgtccggaggttcttttatgtggcgttcattgcag 706 ||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||| Sbjct: 14493177 gtgaagtacaagcaccatttcgtggtgtccgaaggttcttttatgtggcgttaactgcag 14493118 Query: 707 cggctggaatttcaacattctttaccattcccagacttatacttgcacttcaaggtggtg 766 | ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| | Sbjct: 14493117 cagctggaatttcaacattctttaccattcctagacttatacttgcagttcaaggtggcg 14493058 Query: 767 atggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggta 823 ||||||| || ||| | |||||||| | ||||||||||||||| ||||||||||||| Sbjct: 14493057 atggtgcccctgatctgctggaaactgttgggaatgctgccatcaatattggaggta 14493001 Score = 206 bits (104), Expect = 2e-49 Identities = 149/164 (90%) Strand = Plus / Minus Query: 819 aggtattgttgtgctcgtggctttatttgtctgggaaaacaagaaagaagaagagcagat 878 |||||||||||||||||||||||| | | |||||||||||||||||||||| ||||||| Sbjct: 14492154 aggtattgttgtgctcgtggctttgtatttctgggaaaacaagaaagaagagcagcagat 14492095 Query: 879 tacaaatatctctcgtaatgaaaccctttcaaggttacctgtgcgtctgtcaaccaatcg 938 ||| | || ||||| |||||||||||||||||||||||||| || |||||||||||||| Sbjct: 14492094 cacacaaatttctcgcaatgaaaccctttcaaggttacctgtccgcctgtcaaccaatcg 14492035 Query: 939 cataactgaacttgtgcaactccgggacattactaggccagtta 982 ||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 14492034 cattattgagcttgtgcaactccgggacattactaggccagtta 14491991 Score = 204 bits (103), Expect = 8e-49 Identities = 166/187 (88%) Strand = Plus / Minus Query: 979 gttatattggcaggttcaaaagcatctgttactcaagcaatgcaaagagctgagaggtac 1038 |||||| ||||||||||||||||||| |||||| ||||||||||||||||||||| || Sbjct: 14491877 gttatactggcaggttcaaaagcatccattactcgagcaatgcaaagagctgagagatat 14491818 Query: 1039 cgaactgaactgctcaaacgaggcgttcttctaattcctgtgatctttggtgcttcacaa 1098 || ||||||||||| |||||||| |||||||||||||||||||||||||||||||| || Sbjct: 14491817 cggactgaactgctgaaacgaggtgttcttctaattcctgtgatctttggtgcttctcag 14491758 Query: 1099 aaagtccaaggcaaaccaaaaggcttcggtactacaagatctgctgcatcagctccttca 1158 |||| |||| | || |||| |||||| || | | |||||||||||||||||||||||||| Sbjct: 14491757 aaagcccaaagtaagccaagaggctttggaagttcaagatctgctgcatcagctccttca 14491698 Query: 1159 attgggg 1165 |||||| Sbjct: 14491697 gttgggg 14491691 Score = 143 bits (72), Expect = 2e-30 Identities = 123/140 (87%) Strand = Plus / Minus Query: 450 cagggaagaaagcaaaaaagctgcagattgcttgagaatagctttgcgagattacaatct 509 ||||||||||||||| ||||||||||||||||| || | |||| |||||||||| ||||| Sbjct: 14493898 cagggaagaaagcaacaaagctgcagattgcttaaggacagctctgcgagattataatct 14493839 Query: 510 caaatttggcacagtacttaatgatccagacatggcgccattcagggcatcaccagaatt 569 ||| ||||| || ||||||||||||| ||| |||| || |||||||||||||| ||||| Sbjct: 14493838 caagtttggtactatacttaatgatcctgacttggcaccgttcagggcatcaccggaatt 14493779 Query: 570 taaggaacttcaagaggagg 589 |||||||||||||| |||| Sbjct: 14493778 caaggaacttcaagaagagg 14493759 Score = 111 bits (56), Expect = 8e-21 Identities = 89/100 (89%) Strand = Plus / Minus Query: 1264 agttggatacgtgatcagcaagaatcggaaggtgtcactcctggtgaagatgtctacata 1323 |||||||||||||| |||||||| || |||||||||||||| |||||||||||||| ||| Sbjct: 14490242 agttggatacgtgaccagcaagagtctgaaggtgtcactcccggtgaagatgtctatata 14490183 Query: 1324 attctccgtcttgatggtcgtgtgagaagatccggaagag 1363 || ||||| | ||||||||||| |||||||| ||||||| Sbjct: 14490182 atcctccgattggatggtcgtgtcagaagatctggaagag 14490143 Score = 97.6 bits (49), Expect = 1e-16 Identities = 88/101 (87%) Strand = Plus / Minus Query: 348 ggtgaaggacgcacttgaacaatttgacaaggccctagagctgaatccaaatcctaccga 407 ||||||||| || |||||||||||||| || |||||||||||||||||||||||| || Sbjct: 14494086 ggtgaaggatgctcttgaacaatttgagaatgccctagagctgaatccaaatcctgttga 14494027 Query: 408 agcccaagcagcgttctataacaaggcatgctgccatgcat 448 |||||||||||| | || || || |||||||||||||||| Sbjct: 14494026 agcccaagcagcactatacaataaagcatgctgccatgcat 14493986 Score = 95.6 bits (48), Expect = 5e-16 Identities = 87/100 (87%) Strand = Plus / Minus Query: 253 ccgtctccccctccttcgccggagaaggcggtcgaggcggctccgacggcggagtcgtgc 312 ||||||||||| || ||||||| ||||| || | ||| | |||||||||||||||||| Sbjct: 14495804 ccgtctcccccgccatcgccggggaaggaggcggtggctgtcccgacggcggagtcgtgc 14495745 Query: 313 gtcaacctcggcctcgagttcttctccaagggcagggtga 352 |||||||| || |||||| ||||||||||||||||||||| Sbjct: 14495744 gtcaacctgggactcgagctcttctccaagggcagggtga 14495705 Score = 75.8 bits (38), Expect = 5e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 1168 gactttgaaaaacgtactgaatctattgcggcaaaatcacgactcagagccgaggttcga 1227 |||||||| || ||||||||||||||||| || |||||||| | | ||| || | ||| Sbjct: 14491577 gactttgagaagcgtactgaatctattgcagcgaaatcacggttaaaagctgaagagcga 14491518 Query: 1228 tttaaagccgatattgtctctccagaacaatgggaaag 1265 ||||| || |||||||||||||| |||||||||||||| Sbjct: 14491517 tttaaggctgatattgtctctcctgaacaatgggaaag 14491480 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Minus Query: 1363 ggcatgccaaactggaatgatattttgaaggaattgccacgtcttgaagatttgctcagc 1422 ||||||||||| ||||| || || ||| ||||| | ||||| |||||||| |||| ||| Sbjct: 14489921 ggcatgccaaattggaacgacatattgcaggaacttccacgacttgaagaactgctgagc 14489862 Query: 1423 aaacttgaacg 1433 ||||||||||| Sbjct: 14489861 aaacttgaacg 14489851
>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0514H03 Length = 167230 Score = 319 bits (161), Expect = 2e-83 Identities = 218/237 (91%) Strand = Plus / Minus Query: 587 aggcattgcgtggtggagaagatattggttctggattccgaagagatctaaagcttatta 646 |||||||||||||||||||||||||||||||||| ||||||||||| || || || |||| Sbjct: 52550 aggcattgcgtggtggagaagatattggttctgggttccgaagagacctgaaactcatta 52491 Query: 647 gtgaagtacaagcaccatttcgtggtgtccggaggttcttttatgtggcgttcattgcag 706 ||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||| Sbjct: 52490 gtgaagtacaagcaccatttcgtggtgtccgaaggttcttttatgtggcgttaactgcag 52431 Query: 707 cggctggaatttcaacattctttaccattcccagacttatacttgcacttcaaggtggtg 766 | ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| | Sbjct: 52430 cagctggaatttcaacattctttaccattcctagacttatacttgcagttcaaggtggcg 52371 Query: 767 atggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggta 823 ||||||| || ||| | |||||||| | ||||||||||||||| ||||||||||||| Sbjct: 52370 atggtgcccctgatctgctggaaactgttgggaatgctgccatcaatattggaggta 52314 Score = 206 bits (104), Expect = 2e-49 Identities = 149/164 (90%) Strand = Plus / Minus Query: 819 aggtattgttgtgctcgtggctttatttgtctgggaaaacaagaaagaagaagagcagat 878 |||||||||||||||||||||||| | | |||||||||||||||||||||| ||||||| Sbjct: 51467 aggtattgttgtgctcgtggctttgtatttctgggaaaacaagaaagaagagcagcagat 51408 Query: 879 tacaaatatctctcgtaatgaaaccctttcaaggttacctgtgcgtctgtcaaccaatcg 938 ||| | || ||||| |||||||||||||||||||||||||| || |||||||||||||| Sbjct: 51407 cacacaaatttctcgcaatgaaaccctttcaaggttacctgtccgcctgtcaaccaatcg 51348 Query: 939 cataactgaacttgtgcaactccgggacattactaggccagtta 982 ||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 51347 cattattgagcttgtgcaactccgggacattactaggccagtta 51304 Score = 204 bits (103), Expect = 8e-49 Identities = 166/187 (88%) Strand = Plus / Minus Query: 979 gttatattggcaggttcaaaagcatctgttactcaagcaatgcaaagagctgagaggtac 1038 |||||| ||||||||||||||||||| |||||| ||||||||||||||||||||| || Sbjct: 51190 gttatactggcaggttcaaaagcatccattactcgagcaatgcaaagagctgagagatat 51131 Query: 1039 cgaactgaactgctcaaacgaggcgttcttctaattcctgtgatctttggtgcttcacaa 1098 || ||||||||||| |||||||| |||||||||||||||||||||||||||||||| || Sbjct: 51130 cggactgaactgctgaaacgaggtgttcttctaattcctgtgatctttggtgcttctcag 51071 Query: 1099 aaagtccaaggcaaaccaaaaggcttcggtactacaagatctgctgcatcagctccttca 1158 |||| |||| | || |||| |||||| || | | |||||||||||||||||||||||||| Sbjct: 51070 aaagcccaaagtaagccaagaggctttggaagttcaagatctgctgcatcagctccttca 51011 Query: 1159 attgggg 1165 |||||| Sbjct: 51010 gttgggg 51004 Score = 143 bits (72), Expect = 2e-30 Identities = 123/140 (87%) Strand = Plus / Minus Query: 450 cagggaagaaagcaaaaaagctgcagattgcttgagaatagctttgcgagattacaatct 509 ||||||||||||||| ||||||||||||||||| || | |||| |||||||||| ||||| Sbjct: 53211 cagggaagaaagcaacaaagctgcagattgcttaaggacagctctgcgagattataatct 53152 Query: 510 caaatttggcacagtacttaatgatccagacatggcgccattcagggcatcaccagaatt 569 ||| ||||| || ||||||||||||| ||| |||| || |||||||||||||| ||||| Sbjct: 53151 caagtttggtactatacttaatgatcctgacttggcaccgttcagggcatcaccggaatt 53092 Query: 570 taaggaacttcaagaggagg 589 |||||||||||||| |||| Sbjct: 53091 caaggaacttcaagaagagg 53072 Score = 111 bits (56), Expect = 8e-21 Identities = 89/100 (89%) Strand = Plus / Minus Query: 1264 agttggatacgtgatcagcaagaatcggaaggtgtcactcctggtgaagatgtctacata 1323 |||||||||||||| |||||||| || |||||||||||||| |||||||||||||| ||| Sbjct: 49555 agttggatacgtgaccagcaagagtctgaaggtgtcactcccggtgaagatgtctatata 49496 Query: 1324 attctccgtcttgatggtcgtgtgagaagatccggaagag 1363 || ||||| | ||||||||||| |||||||| ||||||| Sbjct: 49495 atcctccgattggatggtcgtgtcagaagatctggaagag 49456 Score = 97.6 bits (49), Expect = 1e-16 Identities = 88/101 (87%) Strand = Plus / Minus Query: 348 ggtgaaggacgcacttgaacaatttgacaaggccctagagctgaatccaaatcctaccga 407 ||||||||| || |||||||||||||| || |||||||||||||||||||||||| || Sbjct: 53399 ggtgaaggatgctcttgaacaatttgagaatgccctagagctgaatccaaatcctgttga 53340 Query: 408 agcccaagcagcgttctataacaaggcatgctgccatgcat 448 |||||||||||| | || || || |||||||||||||||| Sbjct: 53339 agcccaagcagcactatacaataaagcatgctgccatgcat 53299 Score = 95.6 bits (48), Expect = 5e-16 Identities = 87/100 (87%) Strand = Plus / Minus Query: 253 ccgtctccccctccttcgccggagaaggcggtcgaggcggctccgacggcggagtcgtgc 312 ||||||||||| || ||||||| ||||| || | ||| | |||||||||||||||||| Sbjct: 55117 ccgtctcccccgccatcgccggggaaggaggcggtggctgtcccgacggcggagtcgtgc 55058 Query: 313 gtcaacctcggcctcgagttcttctccaagggcagggtga 352 |||||||| || |||||| ||||||||||||||||||||| Sbjct: 55057 gtcaacctgggactcgagctcttctccaagggcagggtga 55018 Score = 75.8 bits (38), Expect = 5e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 1168 gactttgaaaaacgtactgaatctattgcggcaaaatcacgactcagagccgaggttcga 1227 |||||||| || ||||||||||||||||| || |||||||| | | ||| || | ||| Sbjct: 50890 gactttgagaagcgtactgaatctattgcagcgaaatcacggttaaaagctgaagagcga 50831 Query: 1228 tttaaagccgatattgtctctccagaacaatgggaaag 1265 ||||| || |||||||||||||| |||||||||||||| Sbjct: 50830 tttaaggctgatattgtctctcctgaacaatgggaaag 50793 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Minus Query: 1363 ggcatgccaaactggaatgatattttgaaggaattgccacgtcttgaagatttgctcagc 1422 ||||||||||| ||||| || || ||| ||||| | ||||| |||||||| |||| ||| Sbjct: 49234 ggcatgccaaattggaacgacatattgcaggaacttccacgacttgaagaactgctgagc 49175 Query: 1423 aaacttgaacg 1433 ||||||||||| Sbjct: 49174 aaacttgaacg 49164
>ref|NM_100172.2| Arabidopsis thaliana unknown protein (AT1G02910) mRNA, complete cds Length = 1557 Score = 71.9 bits (36), Expect = 7e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 763 ggtgatggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggt 822 ||||||||||||||| || |||||||||| | || |||||||| ||||| ||||||||| Sbjct: 708 ggtgatggtgctccaaatcttctggaaactacgggaaatgctgcaattaacattggaggt 767 Query: 823 attgttgt 830 |||||||| Sbjct: 768 attgttgt 775
>emb|BX815720.1|CNS0ADV7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS88ZA05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1574 Score = 71.9 bits (36), Expect = 7e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 763 ggtgatggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggt 822 ||||||||||||||| || |||||||||| | || |||||||| ||||| ||||||||| Sbjct: 725 ggtgatggtgctccaaatcttctggaaactacgggaaatgctgcaattaacattggaggt 784 Query: 823 attgttgt 830 |||||||| Sbjct: 785 attgttgt 792
>emb|BX813549.1|CNS0ADM3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB23ZG01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1514 Score = 71.9 bits (36), Expect = 7e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 763 ggtgatggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggt 822 ||||||||||||||| || |||||||||| | || |||||||| ||||| ||||||||| Sbjct: 696 ggtgatggtgctccaaatcttctggaaactacgggaaatgctgcaattaacattggaggt 755 Query: 823 attgttgt 830 |||||||| Sbjct: 756 attgttgt 763
>gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16 genomic sequence, complete sequence Length = 100239 Score = 56.0 bits (28), Expect = 4e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 763 ggtgatggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggt 822 ||||||||||||||| || |||||||||| | || |||||||| ||||| ||||||||| Sbjct: 35593 ggtgatggtgctccaaatcttctggaaactacgggaaatgctgcaattaacattggaggt 35652
>dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025H06 Length = 151547 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Minus Query: 1363 ggcatgccaaactggaatgatattttgaaggaattgccacgtcttgaagatttgctcagc 1422 ||||||||||| ||||| || || ||| ||||| | ||||| |||||||| |||| ||| Sbjct: 151318 ggcatgccaaattggaacgacatattgcaggaacttccacgacttgaagaactgctgagc 151259 Query: 1423 aaacttgaacg 1433 ||||||||||| Sbjct: 151258 aaacttgaacg 151248
>emb|BX816140.1|CNS0ADB7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZC04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1492 Score = 52.0 bits (26), Expect = 0.007 Identities = 50/58 (86%) Strand = Plus / Plus Query: 763 ggtgatggtgctccagattttctggaaacggctgggaatgctgccattaatattggag 820 ||||||||||||||| || |||||||||| | || |||||||| ||||| ||||||| Sbjct: 672 ggtgatggtgctccaaatcttctggaaactacgggaaatgctgcaattaacattggag 729
>gb|AC186764.1| Pongo pygmaeus abelii chromosome UNK clone CH276-36H12, complete sequence Length = 194836 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1097 aaaaagtccaaggcaaaccaaaaggc 1122 ||||||| |||||||||||||||||| Sbjct: 180285 aaaaagtacaaggcaaaccaaaaggc 180310
>gb|AC091805.16| Homo sapiens 12p BAC RP11-841C19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 177115 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1097 aaaaagtccaaggcaaaccaaaaggc 1122 ||||||| |||||||||||||||||| Sbjct: 15229 aaaaagtacaaggcaaaccaaaaggc 15254
>emb|AL359313.11| Human DNA sequence from clone RP1-321C2 on chromosome 6 Contains part of novel gene, complete sequence Length = 52461 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 866 aagaagagcagattacaaatat 887 |||||||||||||||||||||| Sbjct: 22746 aagaagagcagattacaaatat 22767
>gb|AC186346.2| Gallus gallus BAC clone CH261-175M10 from chromosome z, complete sequence Length = 192146 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1375 tggaatgatattttgaaggaa 1395 ||||||||||||||||||||| Sbjct: 123232 tggaatgatattttgaaggaa 123212
>gb|DQ210445.1| Maxillaria concavilabia 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 766 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 cgtcgcccccgtctccccctc 265 ||||||||||||||||||||| Sbjct: 136 cgtcgcccccgtctccccctc 156
>gb|DQ210307.1| Maxillaria cerifera 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 773 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 cgtcgcccccgtctccccctc 265 ||||||||||||||||||||| Sbjct: 136 cgtcgcccccgtctccccctc 156
>gb|DQ210167.1| Maxillaria notylioglossa 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 774 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 cgtcgcccccgtctccccctc 265 ||||||||||||||||||||| Sbjct: 136 cgtcgcccccgtctccccctc 156
>gb|DQ210117.1| Maxillaria cerifera 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 776 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 cgtcgcccccgtctccccctc 265 ||||||||||||||||||||| Sbjct: 136 cgtcgcccccgtctccccctc 156
>gb|DQ210114.1| Maxillaria notylioglossa 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 774 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 cgtcgcccccgtctccccctc 265 ||||||||||||||||||||| Sbjct: 136 cgtcgcccccgtctccccctc 156
>gb|DQ210045.1| Maxillaria neglecta 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 766 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 cgtcgcccccgtctccccctc 265 ||||||||||||||||||||| Sbjct: 136 cgtcgcccccgtctccccctc 156
>gb|AY744675.1| Homo sapiens matrix metalloproteinase 10 (stromelysin 2) (MMP10) gene, complete cds Length = 13828 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 839 ctttatttgtctgggaaaacaagaaagaa 867 ||||||||| ||| ||||||||||||||| Sbjct: 1101 ctttatttggctgagaaaacaagaaagaa 1129
>ref|XM_500221.1| Yarrowia lipolytica CLIB122, YALI0A18898g predicted mRNA Length = 1407 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 312 cgtcaacctcggcctcgagttcttc 336 ||||||||||||||||| ||||||| Sbjct: 1030 cgtcaacctcggcctcgggttcttc 1006
>gb|AC124439.4| Mus musculus BAC clone RP24-261N14 from chromosome 9, complete sequence Length = 162530 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 748 cttgcacttcaaggtggtgat 768 ||||||||||||||||||||| Sbjct: 60272 cttgcacttcaaggtggtgat 60292
>gb|AY935268.1| Antirrhinum majus farinelli (FAR) gene, complete sequence Length = 54307 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 cgaccacctcaccatccctcc 74 ||||||||||||||||||||| Sbjct: 1118 cgaccacctcaccatccctcc 1098
>gb|AF525010.1| Acacia galpinii psbA gene, partial sequence; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast genes for chloroplast products Length = 487 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 715 atttcaacattctttaccatt 735 ||||||||||||||||||||| Sbjct: 186 atttcaacattctttaccatt 206
>gb|AF524971.1| Enterolobium contortisiliquum psbA gene, partial sequence; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast genes for chloroplast products Length = 483 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 715 atttcaacattctttaccatt 735 ||||||||||||||||||||| Sbjct: 187 atttcaacattctttaccatt 207
>gb|AF524970.1| Ebenopsis ebano psbA gene, partial sequence; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast genes for chloroplast products Length = 454 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 715 atttcaacattctttaccatt 735 ||||||||||||||||||||| Sbjct: 186 atttcaacattctttaccatt 206
>gb|AC108050.5| Homo sapiens BAC clone RP11-331M18 from 4, complete sequence Length = 214250 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 aacccacctttcccttctctc 131 ||||||||||||||||||||| Sbjct: 5189 aacccacctttcccttctctc 5169
>emb|AL451136.11| Human DNA sequence from clone RP11-291L19 on chromosome 1 Contains the 5' end of the TESK2 gene for testis-specific kinase 2, a peptidylprolyl isomerase A (cyclophilin A) (PPIA) pseudogene, a novel gene, a novel gene (DKFZP564I122) and the 3' end of the PRDX1 gene for peroxiredoxin 1, complete sequence Length = 137143 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 446 catacagggaagaaagcaaaaaagc 470 |||||||||||||||||| |||||| Sbjct: 102678 catacagggaagaaagcataaaagc 102702
>ref|XM_649970.1| Entamoeba histolytica HM-1:IMSS DEAD/DEAH box helicase, putative (37.t00031) partial mRNA Length = 1995 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1010 ctcaagcaatgcaaagagctg 1030 ||||||||||||||||||||| Sbjct: 1025 ctcaagcaatgcaaagagctg 1045
>emb|Z99111.2|BSUB0008 Bacillus subtilis complete genome (section 8 of 21): from 1410943 to 1602922 Length = 191980 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 856 aacaagaaagaagaagagcagatta 880 ||||||||| ||||||||||||||| Sbjct: 101500 aacaagaaaaaagaagagcagatta 101524
>gb|AF012285.1|AF012285 Bacillus subtilis mobA-nprE gene region Length = 46864 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 856 aacaagaaagaagaagagcagatta 880 ||||||||| ||||||||||||||| Sbjct: 18238 aacaagaaaaaagaagagcagatta 18262
>emb|AL596169.1| Listeria innocua Clip11262 complete genome, segment 7/12 Length = 239050 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 495 gcgagattacaatctcaaatt 515 ||||||||||||||||||||| Sbjct: 179238 gcgagattacaatctcaaatt 179258
>emb|CR387927.9| Zebrafish DNA sequence from clone CH211-260P11 in linkage group 14, complete sequence Length = 149672 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1638 cacaacattttaattacaata 1658 ||||||||||||||||||||| Sbjct: 63304 cacaacattttaattacaata 63284
>emb|CR931738.1| Medicago truncatula chromosome 5 clone mth2-56k10, COMPLETE SEQUENCE Length = 132450 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 716 tttcaacattctttaccattc 736 ||||||||||||||||||||| Sbjct: 98223 tttcaacattctttaccattc 98203
>gb|AC131072.13| Mus musculus chromosome 1, clone RP23-396F21, complete sequence Length = 192542 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 784 ctggaaacggctgggaatgct 804 ||||||||||||||||||||| Sbjct: 108998 ctggaaacggctgggaatgct 108978
>gb|AC025164.37| Homo sapiens 12 BAC RP11-796E2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 216841 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1639 acaacattttaattacaatag 1659 ||||||||||||||||||||| Sbjct: 159461 acaacattttaattacaatag 159481
>gb|AY190946.1| Drosophila pseudoobscura clone DPSF01_27_F17 (D1456) genomic sequence Length = 44117 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 gcggctccgacggcggagtcg 309 ||||||||||||||||||||| Sbjct: 28957 gcggctccgacggcggagtcg 28937
>gb|AY168637.1| Baboon herpesvirus 2 strain X313/860 DNA polymerase gene, partial cds Length = 1702 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 aacgcgtcctcgtcgcccccg 255 ||||||||||||||||||||| Sbjct: 515 aacgcgtcctcgtcgcccccg 495
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 aacgcgtcctcgtcgcccccg 255 ||||||||||||||||||||| Sbjct: 65359 aacgcgtcctcgtcgcccccg 65339
>dbj|AP000647.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-75I23, complete sequence Length = 118818 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 839 ctttatttgtctgggaaaacaagaaagaa 867 ||||||||| ||| ||||||||||||||| Sbjct: 82252 ctttatttggctgagaaaacaagaaagaa 82224
>dbj|AP000619.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-42C6, complete sequence Length = 103181 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 839 ctttatttgtctgggaaaacaagaaagaa 867 ||||||||| ||| ||||||||||||||| Sbjct: 33030 ctttatttggctgagaaaacaagaaagaa 33002
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 312 cgtcaacctcggcctcgagttcttc 336 ||||||||||||||||| ||||||| Sbjct: 2033742 cgtcaacctcggcctcgggttcttc 2033718
>ref|NM_205069.1| Gallus gallus integrin, alpha 1 (ITGA1), mRNA dbj|AB000470.1| Gallus gallus mRNA for alpha1 integrin, complete cds Length = 3926 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1375 tggaatgatattttgaaggaa 1395 ||||||||||||||||||||| Sbjct: 2970 tggaatgatattttgaaggaa 2950 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 299,387,620 Number of extensions: 16055170 Number of successful extensions: 348306 Number of sequences better than 10.0: 45 Number of HSP's gapped: 348301 Number of HSP's successfully gapped: 66 Length of query: 1690 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1667 Effective length of database: 18,503,978,556 Effective search space: 30846132252852 Effective search space used: 30846132252852 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)