ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf66i16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK062981:Os03g0685900 164 4e-41
2AK067546:Os11g0550500 30 1.9
3AK070012:Os01g0910200 28 7.2 
>AK062981:Os03g0685900 |
          Length = 94
 Score =  164 bits (416), Expect = 4e-41
 Identities = 74/87 (85%), Positives = 80/87 (91%)
 Frame = +3

Query: 114 MGFIMEFAENLILRLMEDPEQRDEAQRAHVYRMKERCERTKAAWALPLRPYGFWTFDHFN 293
           MGF+MEFAENLILR+MEDP +RD AQR HVYRMKERCERTKAAW+LPLRPYGFWTFD FN
Sbjct: 1   MGFVMEFAENLILRMMEDPGKRDAAQREHVYRMKERCERTKAAWSLPLRPYGFWTFDRFN 60

Query: 294 SQLSWDPQISQAAGRRDPYDDLLARHA 374
           SQLSWDPQIS A GRRDPYDD+L RH+
Sbjct: 61  SQLSWDPQISHAPGRRDPYDDVLHRHS 87
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>AK067546:Os11g0550500 |
          Length = 914

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/59 (25%), Positives = 27/59 (45%)
 Frame = +3

Query: 192 RAHVYRMKERCERTKAAWALPLRPYGFWTFDHFNSQLSWDPQISQAAGRRDPYDDLLAR 368
           ++H+  + E  ++ K       RP G  T D    Q +    +S+  G +   DDL++R
Sbjct: 120 KSHIKEVSELRDKYKVDGVTVARPVGHQTVDSLRLQSALYKNVSELVGTKKKTDDLVSR 178
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>AK070012:Os01g0910200 |
          Length = 102

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 453 RRTHFLKMTVITFPSVSSILSLNCPSWFM 539
           + TH     V   PS+SS+  LN P+WFM
Sbjct: 15  QNTHVNGSKVQKTPSLSSLGHLNLPTWFM 43


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 12,733,403
Number of extensions: 222857
Number of successful extensions: 611
Number of sequences better than 10.0: 3
Number of HSP's gapped: 611
Number of HSP's successfully gapped: 3
Length of query: 222
Length of database: 15,399,855
Length adjustment: 97
Effective length of query: 125
Effective length of database: 11,515,878
Effective search space: 1439484750
Effective search space used: 1439484750
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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